vanderbilt university nascabig ® tbpt face-to-face meeting december 6-7, 2011 nashville, tn cabig...
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Vanderbilt University
NascaBIG ® TBPT Face-to-Face Meeting
December 6-7, 2011Nashville, TN
caBIG ® TBPT Face-to-Face Meeting
December 6-7, 2011
Vanderbilt University
Nashville, TN
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Logistics
• Logistics• Registration• Restrooms• Lunch Options• Break-out rooms
• WirelessConnect to SSID: Wayport ConferenceOpen a new browser window Password: conference
2
• Meeting hashtag: #caTissue• Tags and handles of interest:
• #caBIG• @NCIcaBIG
• @ianmfore• @speakman• @kerlavar
Map of Attendee Locations:19 States, 2 Countries
• California• Connecticut• Florida• Georgia• Indiana• Louisiana• Massachusetts• Maryland• Minnesota• Missouri
• Nebraska• New York• North Carolina• Ohio• Oregon• Pennsylvania• Tennessee• Texas• Virginia
• The Netherlands
39 Affiliations• 5AM Solutions, Inc• Academic Medical Center• Baylor College of Medicine• Booz Allen Hamilton• Daedalus Software, Inc.• Dana-Farber Cancer Institute• Duke Cancer Institute• Edwards Comprehensive Cancer Center• Ekagra• Emory University• Essex• Georgetown University• IMS, Inc• Indiana University• Johns Hopkins University• Kimmel Cancer Center, TJU• Louisiana Cancer Research Consortium• Medical University of South Carolina• Meharry Medical College
• Memorial Sloan-Kettering Cancer Center• NCI CBIIT• NCI, OBBR/ PSG• Ohio State University• Oregon Health and Science University• SAIC-Frederick• Sapient Government Services• St. Joseph Mercy Hospital, Ann Arbor• Thomas Jefferson University• University of California San Francisco• University of Florida• University of Minnesota Medical School• University of Nebraska Medical Center• University of TX Health Science Center
San Antonio• Vanderbilt University• Vanderbilt-Ingram Cancer Center• Vrije Universiteit Medisch Centrum• Wake Forest Comprehensive Cancer
Center• Washington University St. Louis• Yale University
Call for Data on caTissue Use
• Production and Pilot Known Instances posted on the TBPT WS wiki• https://wiki.nci.nih.gov/display/TBPT/caTissue+Usage+Data+-+
Production+and+Pilot+Known+Instances
caTissue Usage (2010 data)
1
10
100
1000
10000
100000
1000000
6383
128798
469
1400039973
10198
288803
150
18910567644
236458
8204
1405
29276
164
6
7273
12
2200
100004472
281338
7849
215653
22
14616
50444
1813
558494
8570
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caBIG Tissue Banks and Pathology ToolsHow does it all fit together?
Ian Fore D.Phil.
Face to Face Meeting, Nashville, TNDecember 6-7 2011
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White Board Image of How it All Fits Together
caBIO
Overview of TBPT Efforts
caTissue Suite
Biospecimen Research Database
Evidence
SOPs
caDSR
Pathology ImagingServices
LIDDEx
Best Practices for Biospecimen Resources
Biospecimen Research Network
Papers
Specimen Processing
Protocol
caBIO
Preanalytic variables
Clinical Pathology
Labs
caTissue Suite
C3PR
Tolven
Others
Subject management
service
Subject registration
service
Vendor A
Vendor B
Vendor C…
Biorepository management
tools
Clinical Trial management
tools
Enterprise services
Enterprise Services
caTissueSpecimen Resource Locator
CBM
Group Banks
Office of Rare Disease
Research
Vendor A
Vendor B
Vendor C
Best Practices for Biospecimen Resources
Global Specimen Identifier
caHUB
TCGA
GSID and CBM
Welcome address from Vanderbilt-Ingram Cancer Center
• Dr. Mia Levy is an Assistant Professor of Biomedical Informatics and Medicine, and the Cancer Clinical Informatics Officer for the Vanderbilt-Ingram Cancer Center.
• She is a practicing medical oncologist specializing in the treatment of breast cancer.
Special Thanks
• Joe Burden
• Scott Sobecki
• Jan Lotterer