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Quality Assurance & Quality Control in Microlabs Dr Mostafa Mahmoud Ahmed, Ph D Consultant Microbiologist, GDHA, Riyadh, KSA. Associate Prof. of Microbiology & Immunology. Faculty of Medicine – Ain Shams University

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Page 1: Microbiology lab QC

Quality Assurance & Quality Control in Microlabs

Dr Mostafa Mahmoud Ahmed, Ph DConsultant Microbiologist, GDHA, Riyadh, KSA.Associate Prof. of Microbiology & Immunology.

Faculty of Medicine – Ain Shams University

Page 2: Microbiology lab QC

The standardized definition of quality refers to all those features of a product (or service) which are required by the customer.

“Quality management“ means what the organization does to ensure that its products or services satisfy the customer's quality requirements and comply with any regulations applicable to those products or services.

Definition of Quality & Quality Management

Page 3: Microbiology lab QC

How do you ensure quality in laboratory?

•By controlling all the factors that influence generation of reliable results

Page 4: Microbiology lab QC

Quality Assurance (QA)The sum total of all activities that are performed to ensure quality of the product

Regarding the clinical lab:• QA is the sum total of all activities that are undertaken to ensure generation, and utilization, of reliable and accurate

results/data

Page 5: Microbiology lab QC

Objectives of quality in lab

Support provision of high quality health-care–Reduce morbidity–Reduce mortality

–Reduce economic loss

• Ensure credibility of lab

• Generate confidence in lab results

Page 6: Microbiology lab QC

Consequences of poor quality

• Inappropriate action– Over-investigation– Over-treatment– Mistreatment

• Inappropriate inaction– Lack of investigation– No treatment

• Delayed action• Loss of credibility of laboratory• Legal actions.

Page 7: Microbiology lab QC

Factors influencing quality

Sample Receiving

Analysis

Reports

DoctorPatient

Requisition

Patient Preparation

Sample Collection

Sample Handling

Sample transport

Within LaboratoryOutside Laboratory

Page 8: Microbiology lab QC

Factors affecting quality (Analytical)

• Proficiency of personnel• Reagents stability, integrity and efficiency• Equipment reliability• Specificity & sensitivity of selected test• Procedural reliability using standard operating procedures• Use of appropriate controls• Documentation• Assessment

Page 9: Microbiology lab QC

Maintenance and Quality Control of Laboratory Equipment

Page 10: Microbiology lab QC

Factors affecting the optimal utilization/ performance of equipment:

• Proper installation• Calibration• Validation• Regular maintenance (including the preventive

ones)• Training of operators

Page 11: Microbiology lab QC

Pre-purchase QC considerations for instruments/equipment

• Purchase instruments/equipment from reputed manufacturers, with long standing, and who in turn practice Quality Standards and GMP.

• Specifications should fit the intended purpose, with comparative cost-effectiveness-compatible with availability of reagents on long term basis.

• Specifications should conform to local conditions (power supply, humidity and other climatic factors).

• Maintenance service (through AMC or other channels) should be preferably local, prompt, and cost-effective

• Should not be a very complex instrument -technical safety and moderate running cost.

• Operating Manual -containing also the instructions for maintenance and “trouble shooting” list-should be provided.

Page 12: Microbiology lab QC

The Equipment File Form1. Unit identification:• Name of the Unit ___________________________________• Manufacturer ____________________________________• Serial No.____________________________________• Model No.____________________________________• Hosp./Lab No.____________________________________• Location____________________________________2. Warranty information:• Date of Purchase____________________________________• Date Received____________________________________• Manufacturer’s Warranty #• Covers a) ______________ From _______ To ________

b) _________________ From _______ To________c) _________________ From _______ To ________

• For Service, call _____________________________________• Address_____________________________________• Telephone #_____________________________________• Other Warranties• Name _____________________________________• Address_____________________________________• Telephone #_____________________________________• Covers a) ________________ From ________ To ________

b) ________________ From ________ To ________

Page 13: Microbiology lab QC

The Equipment File Form (Contd.)

3. Service Contracts:Name --------------------------------------------------------------------------Address_____________________________________Telephone #__________________________________

Covers a) ________________ From ________ To ________b) ________________ From ________ To ________c) ________________ From ________ To ________

4. Performance Monitoring:Frequency Nature of Maintenance _____________

___________________________________----------------------- ---------------------------------------------------------------------------------- -----------------------------------------------------------

5- other files to be included:• User’s manual• Incident reports• Training and privileged persons for this equipment

Page 14: Microbiology lab QC

Microscopes (bright field)

Action required After use Daily Weekly Annually

Clean oil immersion & objective lens paper

*

Remove slides *Cover microscope with dust cover *Adjust optic system *Clean optic system & microscope *-Overhaul microscope *

Page 15: Microbiology lab QC

Centrifuges

• Before using, ensure that -the heads are symmetrically loaded ; the tube caps are sealed tubes are in safety centrifuge cups ; swinging buckets are symmetrically arranged.

• Check the centrifuge, after each run, for cleanliness and accidents.

• Centrifuge is calibrated with a tachometer or strobe light annually/ semiannually, depending upon frequency of its usage.

Page 16: Microbiology lab QC

Centrifuges checklist Action required Quarterly Semiannually Annually Check with tachometer/strobe

* Or *

Check timer *Check brushes & internal parts

*

Check balance of rotors & trunnions

*

Recertify *

Page 17: Microbiology lab QC

Freezers, Incubators & Refrigerators

• A Temperature log sheet should be placed on each piece of equipment, and the temp. be recorded first thing in the morning.

• A temperature variation of ± 1 0C is acceptable for most pieces of equipment

• If 37 0C is desired, then set the instrument at 36 0C.

Page 18: Microbiology lab QC

Freezers, Incubators & Refrigerators checklist

Function Daily Monthly Quarterly Semi-annually

Check temperature *Check pilot lights *Check doo-seal *Defrost, clean or both

*

Recalibrate thermometer

*

Check level *

Page 19: Microbiology lab QC

IncubatorsCalibration-corrected temperature recorded twice daily for days in use, readings separated by at least 4 hours.

Refrigerator

Temperature recorded for days in use, at least once per day.

Page 20: Microbiology lab QC

Water Baths- Should be filled with only distilled water (to prevent accumulation of salts on the walls)

- Temperature variation of ±1 0C is acceptable

Function Daily Monthly Semi-annuallyRecord temperature

*

Check water level

*

Replace water *Clean bath *Recalibrate thermometer

*

Page 21: Microbiology lab QC

Autoclaves

• Should be checked each Friday with commercially available spore strips. This will enable incubation of the strips over the week end, with final report by Monday.

• Whenever materials are being autoclaved in autoclave bags, do not tie the bags tightly, to permit the steam to permeate into all parts within the bag.

Page 22: Microbiology lab QC

Autoclave Function Each

loadWeekly Monthly Semi-

annually Record temperature & pressure

*

Sensitive indicator tape *Spore strip *Clean autoclave *Check doo gasket *Recalibrate and check temp and pressure & timer

*

Page 23: Microbiology lab QC

ELISA READER• Special precaution: • Keep the top of the Reader clear; to avoid over

heating, the cooling fan inlet must not be blocked or covered

• Place the Reader on a flat surface, free of dust, solvents, acidic vapours, vibration and direct sunlight

• Reader should be away from freezers, so that cold wet objects will not be placed on it inadvertently

Page 24: Microbiology lab QC

QC procedure and routine maintenance

Frequency Activity

Daily Clean plate carrier, top of instrument and display window

Every 3 months

Clean air filters (if applicable) Clean and lubricate plate support guide bar

Every 6 months

Check-Linearity; Repeatability; Diode; Accuracy; and Mechanical alignment

Page 25: Microbiology lab QC

Hot Air Oven• Used for drying glass ware• To sterilize metal and some high temperature-stable glass objects• General precautions:

– Place on a level bench top– Not near autoclaves, direct sun light or areas exposed to heat– At least 5 cm (2”) space all-round the oven, to facilitate air-circulation.– No explosives, combustibles or flammables in oven– Do not heat food, oily reagents in oven– Do not sterilize liquids in hot-air-oven– Do not stack glass ware; may lead to breakage– Do not sterilize powders, oily substances and standard glass ware by dry heat

• Routine QC:• 1. Record oven temperature each time it is used

• 2. Semi-annually, clean up the interior parts • 3. Calibrate the gauge or Hg-bulb thermometer once every 6 months, using a

standard thermometer.

Page 26: Microbiology lab QC

Biological Safety Cabinets• Whenever the cabinet is in use, nothing should be

placed on the grid panels, as this could disrupt the air-flow pattern

• Air velocity across the opening of the cabinet should be at least 75 linear ft./min. (The National Sanitation Foundation (NSF) Standards. For Class-II, cabinets) ; cabinet should be set at 90 –100 lft./min., across the opening of the cabinet

• UV lamp to be replaced when the output is 70% or less of its initial rated output (= 253.7 nm)

Page 27: Microbiology lab QC

Biological Safety Cabinets checksAction Required Daily Bi-

monthlyMonthly Semi-

annuallyCheck air pressure gauge *Check air-flow pattern (with a smoke stick)

*

Disinfect the cabinet *Check air velocity (across front)

*

Clean UV Lamp (with alcohol gauze)

*

Check UV lamp output *Recertify cabinet *

Page 28: Microbiology lab QC

pH Meter Action Required Each use Daily

Set temperature compensation (if not automatic)

*

Standardize against certified buffer *Check electrode *Ensure that electrode is immersed in neutral buffer

*

• Meter standardized each use period with pH 7.0 and either 4.0 or 10.0 buffers, with date and buffers recorded in log book.• Commercial buffer solutions dated when received and opened and discarded by expiration date.

Page 29: Microbiology lab QC

Pipettes • Of various kind –to deliver milliliter to micro liter volumes, manual or

automated, repeater, adjustable volume, single or multichannel models.

• Basically, it is either air-displacement mechanism or those which use a plunger mechanism; in general, the positive displacement pipettes (plunger type) are considered more accurate for small volumes.

• Volumetric measurement using pipettes is potential source of error in a microbiology laboratory.

• A small error in pipetting can cause a large error in the final result. Pipettes are used for a number of important purposes –to dilute sera, set up quantitative cultures, to prepare inocula for antimicrobial susceptibility tests, to add ingredients to media/reagents or specimen during test procedures etc.

• It is therefore very important that the accuracy and precision of the pipettes is maintained at all times.

Page 30: Microbiology lab QC

Pipettes maintenanceCalibration methods for pipettes: Gravimetric, spectrophotometric , and colorimetric methods are the most

convenient and commonly used.

Method Basis Limitation Gravimetric 1 ml of water = 1 g

Volume. Dispensed must (adjusted for temperature & pressure)

Volume dispensed must be > 0.002 ml

Spectrophotometric Absorbance of K2Cr2O7 used to create calibration curve

Volume dispensed must be > 0.01 ml

Colorimetric (for quantitative loops)

Absorbance of Evans blue dye used to create calibration curve

Loop volume between 0.01-0.001 ml

Page 31: Microbiology lab QC

Calibration of pipettes: special precautions

• Use the same tip for all deliveries during the calibration procedure, whether the pipette is used for repetitive dispensing of several aliquots of same liquid OR for transferring single aliquots of different liquids.

• ‘Prerinsing’ is precoating of the inside of the tip with the liquid being dispensed. Aspirate an aliquot of the liquid into the tip, and then dispense it back into the original container or discard it. Prerinsing improves the uniformity and precision by providing identical contact surface for all aliquots.

• Temp. of pipettes to be calibrated, room air, test liquid (water) and other equipment should be identical (±0.5 0C)

• Use water with no visible air bubbles; air bubbles alter measured volumes.

• Complete weighing step quickly. Use a lid on the weighing vessel to decrease evaporation. This will obviate the need for an evaporation factor in the calculations.

Page 32: Microbiology lab QC

Analytical Balances

Action needed Each use

Daily Quarterly Annually

Use weighing papers/boats *Clean pan & base of balance * *Ensure balance level *Adjust zero point *Lubricate when necessary *Calibrate with standard weights

*

Recertify balance *

Page 33: Microbiology lab QC

Balance

• Calibrated monthly using American Society for Testing and Materials (ASTM) type 1,2 or 3 weights (minimum of 3 traceable weights which bracket laboratory weighing needs.)

• Non-reference weights calibrated every six months with reference weights.

• Annual service contract established, records available of most recent calibration and correction values on file and used.

• Reference weights recertified if damaged or corroded.

Page 34: Microbiology lab QC

Methods of Validating Sterilization ProcessesProcess Physical Methods Chemical

MethodsBiological Methods

Dry Heat Temperature Recording Charts

Colour Change Indicators*

Bacillus subtilis ** (ATCC # 9372)

Moist Heat

Temperature Recording Charts

Colour Change Indicators*

Bacillus stearothermophilus** (ATCC #7953)

* “OK Indicator Strips” = what is the manufacturer? “Self Adhesive Autoclave Tape” = Manufacturer ?? “Self Adhesive Dry heat Label” = manufacturer ?? “Temperature” Indicators- for steam and dry sterilization**As spore strips and Prospore ampoules (105-106 spores /strip or ampoule)

Page 35: Microbiology lab QC

Biological Sterilization Indicators

Sterilization Method Biological Indicator Steam Bacillus stearothermophilusDry Heat Bacillus subtilis var. nigerEthylene Oxide Bacillus subtilis var. globigiiIonizing Radiation Bacillus pumilusFiltration Pseudomonas diminuta

Heat resistant spores of B. stearothermophilus are dried on paper treated with nutrient medium and chemicals. After sterilization, the strips are incubated for germination and growth. A colour change indicates whether they have or have not been activated.

Page 36: Microbiology lab QC

Quality Control of glassware• All chipped, damaged or etched glassware

should be discarded to prevent accidents.• Sterilized glassware must be checked for sterility

on a regular basis, and then stored for not >3 weeks prior to use.

• Sterilized glassware as well as clean glassware should be covered with aluminum foil.

• All glassware should be free of detergent.

Page 37: Microbiology lab QC

Glassware/ Plasticware• Graduated cylinders and precalibrated containers used to

measure sample volumes accurate with a tolerance of 2.5% or less.

• Glassware inhibitory residue test performed on initial use of washing compound and whenever different detergent used.

• Batches of dry glassware spot-checked for pH reaction.• Sterility of each lot of sample containers confirmed by

adding sterile non-selective broth to at least one container, incubating at 35 oC for 24 hours and checking for growth.

• Sample bottles hold at least 120 ml and have dechlorinating agent.

Page 38: Microbiology lab QC

Thermometers• Glass and electronic thermometers calibrated

annually, dial thermometers quarterly, at the temperature used, against reference National Institute of Standards and Technology (NIST) thermometer.

• Calibration factor marked on thermometer and calibration date and factor recorded.

• Thermometers discarded if off more than 1 oC from reference thermometer.

• N.B. NIST stops supporting mercury thermometers starting from 1-3-2011

Page 39: Microbiology lab QC

UV Lamp

• If used to sanitize, tested quarterly with meter or by agar spread plate method.

• •UV lamp for fluorogenicmethods should be 6 watt.

Page 40: Microbiology lab QC

Reagent-Grade Water

• Quality of reagent water should be tested for:• Conductivity• Heavy metals• Chlorine residual• Heterotrophic plate count bacteria• Bacteriological quality of reagent water

Page 41: Microbiology lab QC

Dilution/ Rinse Water

• Each batch of dilution/rinse water checked for sterility by adding 50ml of water to 50ml of double-strength non-selective broth. Incubate for 24 hours at 35oC and check for growth.

Page 42: Microbiology lab QC

Laboratory Media Preparation Records Should Include:

• Date of preparation• Type of medium• Lot number• Sterilization time and temperature• Final pH• Technician’s initials• Each new batch of laboratory prepared medium

checked before use with positive and negative culture controls and results recorded.

Page 43: Microbiology lab QC

Thank You