vanderbilt university nascabig ® tbpt face-to-face meeting december 6-7, 2011 nashville, tn cabig...

Vanderbilt University

NascaBIG ® TBPT Face-to-Face Meeting

December 6-7, 2011Nashville, TN

caBIG ® TBPT Face-to-Face Meeting

December 6-7, 2011

Vanderbilt University

Nashville, TN

1

Logistics

• Logistics• Registration• Restrooms• Lunch Options• Break-out rooms

• WirelessConnect to SSID: Wayport ConferenceOpen a new browser window Password: conference

2

Twitter

• Meeting hashtag: #caTissue• Tags and handles of interest:

• #caBIG• @NCIcaBIG

• @ianmfore• @speakman• @kerlavar

Map of Attendee Locations:19 States, 2 Countries

• California• Connecticut• Florida• Georgia• Indiana• Louisiana• Massachusetts• Maryland• Minnesota• Missouri

• Nebraska• New York• North Carolina• Ohio• Oregon• Pennsylvania• Tennessee• Texas• Virginia

• The Netherlands

39 Affiliations• 5AM Solutions, Inc• Academic Medical Center• Baylor College of Medicine• Booz Allen Hamilton• Daedalus Software, Inc.• Dana-Farber Cancer Institute• Duke Cancer Institute• Edwards Comprehensive Cancer Center• Ekagra• Emory University• Essex• Georgetown University• IMS, Inc• Indiana University• Johns Hopkins University• Kimmel Cancer Center, TJU• Louisiana Cancer Research Consortium• Medical University of South Carolina• Meharry Medical College

• Memorial Sloan-Kettering Cancer Center• NCI CBIIT• NCI, OBBR/ PSG• Ohio State University• Oregon Health and Science University• SAIC-Frederick• Sapient Government Services• St. Joseph Mercy Hospital, Ann Arbor• Thomas Jefferson University• University of California San Francisco• University of Florida• University of Minnesota Medical School• University of Nebraska Medical Center• University of TX Health Science Center

San Antonio• Vanderbilt University• Vanderbilt-Ingram Cancer Center• Vrije Universiteit Medisch Centrum• Wake Forest Comprehensive Cancer

Center• Washington University St. Louis• Yale University

Call for Data on caTissue Use

• Production and Pilot Known Instances posted on the TBPT WS wiki• https://wiki.nci.nih.gov/display/TBPT/caTissue+Usage+Data+-+

Production+and+Pilot+Known+Instances

caTissue Usage (2010 data)

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100

1000

10000

100000

1000000

6383

128798

469

1400039973

10198

288803

150

18910567644

236458

8204

1405

29276

164

6

7273

12

2200

100004472

281338

7849

215653

22

14616

50444

1813

558494

8570

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caBIG Tissue Banks and Pathology ToolsHow does it all fit together?

Ian Fore D.Phil.

Face to Face Meeting, Nashville, TNDecember 6-7 2011

8

White Board Image of How it All Fits Together

caBIO

Overview of TBPT Efforts

caTissue Suite

Biospecimen Research Database

Evidence

SOPs

caDSR

Pathology ImagingServices

LIDDEx

Best Practices for Biospecimen Resources

Biospecimen Research Network

Papers

Specimen Processing

Protocol

caBIO

Preanalytic variables

Clinical Pathology

Labs

caTissue Suite

C3PR

Tolven

Others

Subject management

service

Subject registration

service

Vendor A

Vendor B

Vendor C…

Biorepository management

tools

Clinical Trial management

tools

Enterprise services

Enterprise Services

caTissueSpecimen Resource Locator

CBM

Group Banks

Office of Rare Disease

Research

Vendor A

Vendor B

Vendor C

Best Practices for Biospecimen Resources

Global Specimen Identifier

caHUB

TCGA

GSID and CBM

Welcome address from Vanderbilt-Ingram Cancer Center

• Dr. Mia Levy is an Assistant Professor of Biomedical Informatics and Medicine, and the Cancer Clinical Informatics Officer for the Vanderbilt-Ingram Cancer Center.

• She is a practicing medical oncologist specializing in the treatment of breast cancer.

Special Thanks

• Joe Burden

• Scott Sobecki

• Jan Lotterer