topics review mtf question noise receiver operating

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1 Image Quality, T.T. Liu, Spring 2006 Image Quality Lecture 2 Thomas Liu UCSD Center for Functional MRI Resident Physics Course April 3, 2006 Image Quality, T.T. Liu, Spring 2006 Topics Review MTF question Noise Receiver Operating Characteristics Sampling and Aliasing

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Image Quality, T.T. Liu, Spring 2006

Image QualityLecture 2

Thomas LiuUCSD Center for Functional MRI

Resident Physics CourseApril 3, 2006

Image Quality, T.T. Liu, Spring 2006

Topics

Review MTF question

Noise

Receiver Operating Characteristics

Sampling and Aliasing

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Image Quality, T.T. Liu, Spring 2006

MTF = Fourier Transform (LTF)

Bushberg et al 2001

Image Quality, T.T. Liu, Spring 2006

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Image Quality, T.T. Liu, Spring 2006

Noise and Image Quality

Prince and Links 2005

Bushberg et al 2001

Image Quality, T.T. Liu, Spring 2006

What is Noise?Fluctuations in either the imaging system or the objectbeing imaged.

Quantization Noise: Due to conversion from analogwaveform to digital number.

Quantum Noise: Random fluctuation in the number ofphotons emitted and recorded.

Thermal Noise: Random fluctuations present in allelectronic systems. Also, sample noise in MRI

Other types: flicker, burst, avalanche - observed insemiconductor devices.

Structured Noise: physiological sources, interference

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Image Quality, T.T. Liu, Spring 2006

Histograms and Distributions

3rd grade heights 6th grade heightsBushberg et al 2001

Image Quality, T.T. Liu, Spring 2006

Gaussian Distribution

1, 2, and 3 standard deviation intervals correspond to 68%,95%, and 99% of the observations

Bushberg et al 2001

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Image Quality, T.T. Liu, Spring 2006

Poisson ProcessEvents occur at random instants of time at an average rate

of λ events per second.

Examples: arrival of customers to an ATM, emission ofphotons from an x-ray source, lightning strikes in athunderstorm.

!

" = Average rate of events per second

"t = Average number of events at time t

"t = Variance in number of events

Image Quality, T.T. Liu, Spring 2006

Quantum Noise

!

For a Poisson process, the mean = variance, i.e. X ="2

Therefore, the standard deviation is given by " = X

For X - ray systems, if the mean number of counts is N, then the

standard deviation in the number of counts is " = N .

SNR=N

"= N .

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Image Quality, T.T. Liu, Spring 2006

Image Quality, T.T. Liu, Spring 2006!

Poisson Distribution describes x - ray counting statistics.

Gaussian distribution is good approximation to Poisson when " = X

Bushberg et al 2001

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Image Quality, T.T. Liu, Spring 2006

Image Quality, T.T. Liu, Spring 2006

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Image Quality, T.T. Liu, Spring 2006

Image Quality, T.T. Liu, Spring 2006

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Image Quality, T.T. Liu, Spring 2006

Contrast Resolution

Bushberg et al 2001

Lower row shows effect of structure noise

Image Quality, T.T. Liu, Spring 2006

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Image Quality, T.T. Liu, Spring 2006

!

Sensitivity = TP

TP + FN

= Fraction of people who have the disease who test positive

Specificity = TN

TN + FP

= Fraction of people who do not have the disease who test negative

Positive Predictive Value = TP

TP + FP

= Probability patient is actually abnormal when diagnosed as abnormal

Negative Predictive Value = TN

TN + FN

= Probability patient is actually normal when diagnosed as normal.

Image Quality, T.T. Liu, Spring 2006

!

True Positive Fraction = TP

TP + FN

= Sensitivity

= Probability of Detection

False Positive Fraction =FP

FP + TN

=1-Specificity

= Probability of False Alarm

Receiver operating characteristic (ROC) curve plots TruePositive Fraction vs. False Positive Fraction

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Image Quality, T.T. Liu, Spring 2006

Detection

Image Quality, T.T. Liu, Spring 2006

Detection

Area is a measure of detectability

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Image Quality, T.T. Liu, Spring 2006

Image Quality, T.T. Liu, Spring 2006

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Image Quality, T.T. Liu, Spring 2006

!

Nyquist Frequency = FN

=1

2"

If f > FN, then aliasing will occur

Sampling Pitch

Image Quality, T.T. Liu, Spring 2006

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Image Quality, T.T. Liu, Spring 2006

Image Quality, T.T. Liu, Spring 2006

Sampling in Image Space

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Image Quality, T.T. Liu, Spring 2006

Sampling in k-space

Image Quality, T.T. Liu, Spring 2006

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Image Quality, T.T. Liu, Spring 2006

Smoothing of Projections in CT

Suetens 2002

Projection

Beam Width

SmoothedProjection

2/(Δs)

W= 2/(Δs)δ=1/W= Δs/2