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Swiss-Model reportTRANSCRIPT
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Model Building Report
This document lists the results for the homology modeling project "1." submitted to SWISS-MODEL workspace on Nov. 28, 2014,1:59 p.m..The submitted primary amino acid sequence is given in Table T1.
If you use any results in your research, please cite the relevant publications:
Marco Biasini; Stefan Bienert; Andrew Waterhouse; Konstantin Arnold; Gabriel Studer; Tobias Schmidt; Florian Kiefer; Tiziano GalloCassarino; Martino Bertoni; Lorenza Bordoli; Torsten Schwede. (2014). SWISS-MODEL: modelling protein tertiary and quaternarystructure using evolutionary information. Nucleic Acids Research; doi: 10.1093/nar/gku340.Arnold, K., Bordoli, L., Kopp, J. and Schwede, T. (2006) The SWISS-MODEL workspace: a web-based environment for proteinstructure homology modelling. Bioinformatics, 22, 195-201.Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models.Bioinformatics, 27, 343-350
Results
The SWISS-MODEL template library (SMTL version 2014-11-26, PDB release 2014-11-21) was searched with Blast (Altschul et al.,1997) and HHBlits (Remmert, et al., 2011) for evolutionary related structures matching the target sequence in Table T1. For detailson the template search, see Materials and Methods. Overall 1119 templates were found (Table T2).
Models
The following models were built (see Materials and Methods "Model Building"):
Model #01 File Built with Oligo-State Ligands GMQE QMEAN4
PDB ProMod Version 3.70. MONOMER 1 x CA: CALCIUM ION; 0.99 -1.72
QMEAN4 -1.72C -1.34All Atom -1.26Solvation -1.35Torsion -0.83
Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Range Coverage Description
1cyg.1.A 88.75 monomer BLAST X-ray 2.50 0.59 1 -480 1.00CYCLODEXTRIN
GLUCANOTRANSFERASE
Ligand Added to Model DescriptionCA CALCIUM IONCA - Clashing with protein. CALCIUM ION
Target STSYHGYWARDFKKTNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLIGGYTNDTNS1cyg.1.A SASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANM
Target YFHHNGGTTFSNLEDGIYRNLFDLADFNHQNQFIDKYLKDAIKLWLDMGIDGIRMDAVKHMPFGWQKSFMDEVYDYRPVF1cyg.1.A YFHHNGGTTFSSLEDGIYRNLFDLADLNHQNPVIDRYLKDAVKMWIDMGIDGIRMDAVKHMPFGWQKSLMDEIDNYRPVF
Target TFGEWFLSENEVDSNNHFFANESGMSLLDFRFGQKLRQVLRNNSDDWYGFNQMIQDTASAYDEVIDQVTFIDNHDMDRFM1cyg.1.A TFGEWFLSENEVDANNHYFANESGMSLLDFRFGQKLRQVLRNNSDNWYGFNQMIQDTASAYDEVLDQVTFIDNHDMDRFM
Target ADEGDPRKVDIALAVLLTSRGVPNIYYGTEQYMTGNGDPNNRKMMTSFNKNTRAYQVIQKLSSLRRSNPALSYGDTEQRW1cyg.1.A IDGGDPRKVDMALAVLLTSRGVPNIYYGTEQYMTGNGDPNNRKMMSSFNKNTRAYQVIQKLSSLRRNNPALAYGDTEQRW
Target INSDVYIYERQFGKDVVLVAVNRSLSKSYSITGLFTALPSGTYTDQLGALLDGNTIQVGSNGAVNAFNLGPGEVGVWTYS1cyg.1.A INGDVYVYERQFGKDVVLVAVNRSSSSNYSITGLFTALPAGTYTDQLGGLLDGNTIQVGSNGSVNAFDLGPGEVGVWAYS
Target AAESVPIIGHIGPMMGQVGHKLTIDGEGFGTNVGTVKFGNTVASVVSWSNNQITVTVPNIPAGKYNITVQTSGGQVSAAY1cyg.1.A ATESTPIIGHVGPMMGQVGHQVTIDGEGFGTNTGTVKFGTTAANVVSWSNNQIVVAVPNVSPGKYNITVQSSSGQTSAAY
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Model #02 File Built with Oligo-State Ligands GMQE QMEAN4
PDB ProMod Version 3.70. MONOMER 1 x CA: CALCIUM ION; 0.98 -1.66
QMEAN4 -1.66C -1.34All Atom -1.25Solvation -1.32Torsion -0.80
Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Range Coverage Description
1cyg.1.A 88.73 monomer HHblits X-ray 2.50 0.59 2 -480 1.00CYCLODEXTRIN
GLUCANOTRANSFERASE
Ligand Added to Model DescriptionCA CALCIUM IONCA - Clashing with protein. CALCIUM ION
Target STSYHGYWARDFKKTNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLIGGYTNDTNS1cyg.1.A -ASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANM
Target YFHHNGGTTFSNLEDGIYRNLFDLADFNHQNQFIDKYLKDAIKLWLDMGIDGIRMDAVKHMPFGWQKSFMDEVYDYRPVF1cyg.1.A YFHHNGGTTFSSLEDGIYRNLFDLADLNHQNPVIDRYLKDAVKMWIDMGIDGIRMDAVKHMPFGWQKSLMDEIDNYRPVF
Target TFGEWFLSENEVDSNNHFFANESGMSLLDFRFGQKLRQVLRNNSDDWYGFNQMIQDTASAYDEVIDQVTFIDNHDMDRFM1cyg.1.A TFGEWFLSENEVDANNHYFANESGMSLLDFRFGQKLRQVLRNNSDNWYGFNQMIQDTASAYDEVLDQVTFIDNHDMDRFM
Target ADEGDPRKVDIALAVLLTSRGVPNIYYGTEQYMTGNGDPNNRKMMTSFNKNTRAYQVIQKLSSLRRSNPALSYGDTEQRW1cyg.1.A IDGGDPRKVDMALAVLLTSRGVPNIYYGTEQYMTGNGDPNNRKMMSSFNKNTRAYQVIQKLSSLRRNNPALAYGDTEQRW
Target INSDVYIYERQFGKDVVLVAVNRSLSKSYSITGLFTALPSGTYTDQLGALLDGNTIQVGSNGAVNAFNLGPGEVGVWTYS1cyg.1.A INGDVYVYERQFGKDVVLVAVNRSSSSNYSITGLFTALPAGTYTDQLGGLLDGNTIQVGSNGSVNAFDLGPGEVGVWAYS
Target AAESVPIIGHIGPMMGQVGHKLTIDGEGFGTNVGTVKFGNTVASVVSWSNNQITVTVPNIPAGKYNITVQTSGGQVSAAY1cyg.1.A ATESTPIIGHVGPMMGQVGHQVTIDGEGFGTNTGTVKFGTTAANVVSWSNNQIVVAVPNVSPGKYNITVQSSSGQTSAAY
Model #03 File Built with Oligo-State Ligands GMQE QMEAN4
PDB ProMod Version 3.70. MONOMER None 0.96 -1.47
QMEAN4 -1.47C -0.88All Atom -1.33Solvation -2.41Torsion -0.06
Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Range Coverage Description
3bmw.1.A 68.48 monomer BLAST X-ray 1.60 0.52 1 -480 1.00Cyclomaltodextringlucanotransferase
Ligand Added to Model DescriptionCA - Binding site not conserved. CALCIUM IONCA - Binding site not conserved. CALCIUM IONCL - Not biologically relevant. CHLORIDE ION
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Ligand Added to Model DescriptionGLC - Binding site not conserved. SUGAR (2-MER)GLC - Binding site not conserved. SUGAR (7-MER)GOL - Not biologically relevant. GLYCEROLGOL - Not biologically relevant. GLYCEROLGOL - Not biologically relevant. GLYCEROLGOL - Not biologically relevant. GLYCEROLGOL - Not biologically relevant. GLYCEROLGOL - Not biologically relevant. GLYCEROLSO4 - Not biologically relevant. SULFATE IONSO4 - Not biologically relevant. SULFATE IONSO4 - Not biologically relevant. SULFATE ION
Target STSYHGYWARDFKKTNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLIGGYTNDTNS3bmw.1.A STSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTNDTNG
Target YFHHNGGTTFSNLEDGIYRNLFDLADFNHQNQFIDKYLKDAIKLWLDMGIDGIRMDAVKHMPFGWQKSFMDEVYDYRPVF3bmw.1.A YFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIRLDAVKHMPFGWQKNFMDSILSYRPVF
Target TFGEWFLSENEVDSNNHFFANESGMSLLDFRFGQKLRQVLRNNSDDWYGFNQMIQDTASAYDEVIDQVTFIDNHDMDRFM3bmw.1.A TFGEWFLGTNEIDVNNTYFANESGMSLLDFRFSQKVRQVFRDNTDTMYGLDSMIQSTASDYNFINDMVTFIDNHDMDRFY
Target ADEGDPRKVDIALAVLLTSRGVPNIYYGTEQYMTGNGDPNNRKMMTSFNKNTRAYQVIQKLSSLRRSNPALSYGDTEQRW3bmw.1.A -NGGSTRPVEQALAFTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLAPLRKSNPAIAYGTTQQRW
Target INSDVYIYERQFGKDVVLVAVNRSLSKSYSITGLFTALPSGTYTDQLGALLDGNTIQVGSNGAVNAFNLGPGEVGVWTYS3bmw.1.A INNDVYIYERKFGNNVALVAINRNLSTSYNITGLYTALPAGTYTDVLGGLLNGNSISVASDGSVTPFTLSAGEVAVWQYV
Target AAESVPIIGHIGPMMGQVGHKLTIDGEGFGTNVGTVKFGNTVASVVSWSNNQITVTVPNIPAGKYNITVQTSGGQVSAAY3bmw.1.A SSSNSPLIGHVGPTMTKAGQTITIDGRGFGTTSGQVLFGSTAGTIVSWDDTEVKVKVPSVTPGKYNISLKTSSGATSNTY
Materials and Methods
Template Search
Template search with Blast and HHBlits has been performed against the SWISS-MODEL template library (SMTL, last update:2014-11-26, last included PDB release: 2014-11-21).
The target sequence was searched with BLAST (Altschul et al., 1997) against the primary amino acid sequence contained in theSMTL. A total of 227 templates were found.
An initial HHblits profile has been built using the procedure outlined in (Remmert, et al., 2011), followed by 1 iteration of HHblitsagainst NR20. The obtained profile has then be searched against all profiles of the SMTL. A total of 771 templates were found.
Template Selection
For each identified template, the template's quality has been predicted from features of the target-template alignment. The templateswith the highest quality have then been selected for model building.
Model Building
Models are built based on the target-template alignment using Promod-II. Coordinates which are conserved between the target andthe template are copied from the template to the model. Insertions and deletions are remodeled using a fragment library. Sidechains are then rebuilt. Finally, the geometry of the resulting model is regularized by using a force field. In case loop modelling withProMod-II (Guex, et al., 1997) does not give satisfactory results, an alternative model is built with MODELLER (Sali, et al., 1993).
Model Quality Estimation
The global and per-residue model quality has been assessed using the QMEAN scoring function (Benkert, et al., 2011) . Forimproved performance, weights of the individual QMEAN terms have been trained specifically for SWISS-MODEL.
Ligand Modeling
Ligands present in the template structure are transferred by homology to the model when the following criteria are met (Gallo
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-Casserino, to be published): (a) The ligands are annotated as biologically relevant in the template library, (b) the ligand is in contactwith the model, (c) the ligand is not clashing with the protein, (d) the residues in contact with the ligand are conserved between thetarget and the template. If any of these four criteria is not satisfied, a certain ligand will not be included in the model. The modelsummary includes information on why and which ligand has not been included.
Oligomeric State Conservation
Homo-oligomeric structure of the target protein is predicted based on the analysis of pairwise interfaces of the identified templatestructures. For each relevant interface between polypetide chains (interfaces with more than 10 residue-residue interactions), theQscoreOligomer (Mariani et al., 2011) is predicted from features such as similarity to target and frequency of observing this interfacein the identified templates (Kiefer, Bertoni, Biasini, to be published). The prediction is performed with a random forest regressorusing these features as input parameters to predict the probability of conservation for each interface. The QscoreOligomer of thewhole complex is then calculated as the weight-averaged QscoreOligomer of the interfaces. The oligomeric state of the target ispredicted to be the same as in the template when QscoreOligomer is predicted to be higher or equal to 0.5.
References
Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST andPSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res, 25, 3389-3402.Remmert, M., Biegert, A., Hauser, A. and Soding, J. (2012) HHblits: lightning-fast iterative protein sequence searching byHMM-HMM alignment. Nat Methods, 9, 173-175.Guex, N. and Peitsch, M.C. (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling.Electrophoresis, 18, 2714-2723.Sali, A. and Blundell, T.L. (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol, 234, 779-815.Benkert, P., Biasini, M. and Schwede, T. (2011) Toward the estimation of the absolute quality of individual protein structure models.Bioinformatics, 27, 343-350.Mariani, V., Kiefer, F., Schmidt, T., Haas, J. and Schwede, T. (2011) Assessment of template based protein structure predictions inCASP9. Proteins, 79 Suppl 10, 37-58.
Table T1:
Primary amino acid sequence for which templates were searched and models were built.
STSYHGYWARDFKKTNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLIGGYTNDTNSYFHHNGGTTFSNLEDGIYRNLFDLADFNHQNQFIDKYLKDAIKLWLDMGIDGIRMDAVKHMPFGWQKSFMDEVYDYRPVFTFGEWFLSENEVDSNNHFFANESGMSLLDFRFGQKLRQVLRNNSDDWYGFNQMIQDTASAYDEVIDQVTFIDNHDMDRFMADEGDPRKVDIALAVLLTSRGVPNIYYGTEQYMTGNGDPNNRKMMTSFNKNTRAYQVIQKLSSLRRSNPALSYGDTEQRWINSDVYIYERQFGKDVVLVAVNRSLSKSYSITGLFTALPSGTYTDQLGALLDGNTIQVGSNGAVNAFNLGPGEVGVWTYSAAESVPIIGHIGPMMGQVGHKLTIDGEGFGTNVGTVKFGNTVASVVSWSNNQITVTVPNIPAGKYNITVQTSGGQVSAAY
Table T2:
Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
1cyg.1.A 88.75 monomer BLAST X-ray 2.50 0.59 1.00 CYCLODEXTRINGLUCANOTRANSFERASE
1cyg.1.A 88.73 monomer HHblits X-ray 2.50 0.59 1.00 CYCLODEXTRINGLUCANOTRANSFERASE3bmw.1.A 68.48 monomer BLAST X-ray 1.60 0.52 1.00 Cyclomaltodextrin glucanotransferase
1a47.1.A 68.48 monomer BLAST X-ray 2.56 0.52 1.00 CYCLODEXTRINGLYCOSYLTRANSFERASE3bmw.1.A 68.41 monomer HHblits X-ray 1.60 0.52 1.00 Cyclomaltodextrin glucanotransferase
1a47.1.A 68.41 monomer HHblits X-ray 2.56 0.52 1.00 CYCLODEXTRINGLYCOSYLTRANSFERASE1pj9.1.A 64.58 monomer BLAST X-ray 2.00 0.50 1.00 Cyclomaltodextrin glucanotransferase1pj9.1.A 64.72 monomer HHblits X-ray 2.00 0.50 1.00 Cyclomaltodextrin glucanotransferase
1cgv.1.A 64.17 monomer BLAST X-ray 2.50 0.50 1.00 CYCLOMALTODEXTRINGLUCANOTRANSFERASE
1cxl.1.A 63.96 monomer BLAST X-ray 1.81 0.50 1.00 PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE)1pez.1.A 63.96 monomer BLAST X-ray 2.32 0.50 1.00 Cyclomaltodextrin glucanotransferase
1tcm.1.A 63.96 monomer BLAST X-ray 2.20 0.50 1.00 CYCLODEXTRINGLYCOSYLTRANSFERASE
1cdg.1.A 63.96 monomer BLAST X-ray 2.00 0.50 1.00 CYCLODEXTRIN GLYCOSYL-TRANSFERASE1ot2.1.A 63.96 monomer BLAST X-ray 2.10 0.50 1.00 Cyclomaltodextrin glucanotransferase
1dtu.1.A 63.96 monomer BLAST X-ray 2.40 0.50 1.00 PROTEIN (CYCLODEXTRINGLYCOSYLTRANSFERASE)
1cgy.1.A 63.96 monomer BLAST X-ray 2.50 0.50 1.00 CYCLOMALTODEXTRINGLUCANOTRANSFERASE
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
1cgx.1.A 63.96 monomer BLAST X-ray 2.50 0.50 1.00 CYCLOMALTODEXTRINGLUCANOTRANSFERASE1ot1.1.A 63.96 monomer BLAST X-ray 2.00 0.50 1.00 Cyclomaltodextrin glucanotransferase
1kck.1.A 63.75 monomer BLAST X-ray 2.43 0.50 1.00 CYCLODEXTRINGLYCOSYLTRANSFERASE
1cgw.1.A 63.96 monomer BLAST X-ray 2.50 0.50 1.00 CYCLOMALTODEXTRINGLUCANOTRANSFERASE
1cgv.1.A 64.30 monomer HHblits X-ray 2.50 0.50 1.00 CYCLOMALTODEXTRINGLUCANOTRANSFERASE
1cxl.1.A 64.09 monomer HHblits X-ray 1.81 0.50 1.00 PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE)
1d3c.1.A 63.54 monomer BLAST X-ray 1.78 0.50 1.00 CYCLODEXTRINGLYCOSYLTRANSFERASE1pez.1.A 64.09 monomer HHblits X-ray 2.32 0.50 1.00 Cyclomaltodextrin glucanotransferase
1eo7.1.A 63.75 monomer BLAST X-ray 2.48 0.50 1.00 PROTEIN (CYCLODEXTRINGLYCOSYLTRANSFERASE)
1cdg.1.A 64.09 monomer HHblits X-ray 2.00 0.50 1.00 CYCLODEXTRIN GLYCOSYL-TRANSFERASE
1tcm.1.A 64.09 monomer HHblits X-ray 2.20 0.50 1.00 CYCLODEXTRINGLYCOSYLTRANSFERASE1ot2.1.A 64.09 monomer HHblits X-ray 2.10 0.50 1.00 Cyclomaltodextrin glucanotransferase1kcl.1.A 63.75 monomer BLAST X-ray 1.94 0.50 1.00 Cyclodextrin glycosyltransferase
1dtu.1.A 64.09 monomer HHblits X-ray 2.40 0.50 1.00 PROTEIN (CYCLODEXTRINGLYCOSYLTRANSFERASE)
1cgy.1.A 64.09 monomer HHblits X-ray 2.50 0.50 1.00 CYCLOMALTODEXTRINGLUCANOTRANSFERASE
1cgx.1.A 64.09 monomer HHblits X-ray 2.50 0.50 1.00 CYCLOMALTODEXTRINGLUCANOTRANSFERASE1ot1.1.A 64.09 monomer HHblits X-ray 2.00 0.50 1.00 Cyclomaltodextrin glucanotransferase
6cgt.1.A 63.52 monomer HHblits X-ray 2.60 0.50 0.99 CYCLODEXTRINGLYCOSYLTRANSFERASE
3cgt.1.A 63.52 monomer HHblits X-ray 2.40 0.50 0.99 CYCLODEXTRINGLYCOSYLTRANSFERASE
1kck.1.A 63.88 monomer HHblits X-ray 2.43 0.50 1.00 CYCLODEXTRINGLYCOSYLTRANSFERASE
1cgw.1.A 64.09 monomer HHblits X-ray 2.50 0.50 1.00 CYCLOMALTODEXTRINGLUCANOTRANSFERASE
1cgt.1.A 63.52 monomer HHblits X-ray 2.00 0.50 0.99 CYCLODEXTRIN GLYCOSYL-TRANSFERASE
1cgu.1.A 63.52 monomer HHblits X-ray 2.50 0.50 0.99 CYCLODEXTRIN GLYCOSYL-TRANSFERASE
1d3c.1.A 63.67 monomer HHblits X-ray 1.78 0.50 1.00 CYCLODEXTRINGLYCOSYLTRANSFERASE
1eo7.1.A 63.88 monomer HHblits X-ray 2.48 0.50 1.00 PROTEIN (CYCLODEXTRINGLYCOSYLTRANSFERASE)1kcl.1.A 63.88 monomer HHblits X-ray 1.94 0.50 1.00 Cyclodextrin glycosyltransferase1ukq.1.A 61.25 monomer BLAST X-ray 2.00 0.49 1.00 Cyclomaltodextrin glucanotransferase
1cgt.1.A 64.19 monomer BLAST X-ray 2.00 0.51 0.98 CYCLODEXTRIN GLYCOSYL-TRANSFERASE1v3m.1.A 61.04 monomer BLAST X-ray 2.00 0.49 1.00 Cyclomaltodextrin glucanotransferase1v3j.1.A 61.04 monomer BLAST X-ray 2.00 0.49 1.00 Cyclomaltodextrin glucanotransferase
6cgt.1.A 63.98 monomer BLAST X-ray 2.60 0.51 0.98 CYCLODEXTRINGLYCOSYLTRANSFERASE
1d7f.1.A 61.04 homo-dimer BLAST X-ray 1.90 0.49 1.00 CYCLODEXTRINGLUCANOTRANSFERASE1ukt.1.A 61.04 monomer BLAST X-ray 2.20 0.49 1.00 Cyclomaltodextrin glucanotransferase
3cgt.1.A 63.98 monomer BLAST X-ray 2.40 0.51 0.98 CYCLODEXTRINGLYCOSYLTRANSFERASE1ukq.1.A 61.38 monomer HHblits X-ray 2.00 0.49 1.00 Cyclomaltodextrin glucanotransferase
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
1cgu.1.A 63.98 monomer BLAST X-ray 2.50 0.50 0.98 CYCLODEXTRIN GLYCOSYL-TRANSFERASE1uks.1.A 60.83 monomer BLAST X-ray 1.90 0.49 1.00 Cyclomaltodextrin glucanotransferase1v3m.1.A 61.17 monomer HHblits X-ray 2.00 0.49 1.00 Cyclomaltodextrin glucanotransferase1v3j.1.A 61.17 monomer HHblits X-ray 2.00 0.49 1.00 Cyclomaltodextrin glucanotransferase
1d7f.1.A 61.17 homo-dimer HHblits X-ray 1.90 0.49 1.00 CYCLODEXTRINGLUCANOTRANSFERASE1ukt.1.A 61.17 monomer HHblits X-ray 2.20 0.49 1.00 Cyclomaltodextrin glucanotransferase1uks.1.A 60.96 monomer HHblits X-ray 1.90 0.49 1.00 Cyclomaltodextrin glucanotransferase
4cgt.1.A 63.91 monomer HHblits X-ray 2.60 0.50 0.98 CYCLODEXTRINGLYCOSYLTRANSFERASE
4cgt.1.A 64.38 monomer BLAST X-ray 2.60 0.51 0.97 CYCLODEXTRINGLYCOSYLTRANSFERASE4jcl.1.A 58.13 monomer BLAST X-ray 1.70 0.48 1.00 Cyclomaltodextrin glucanotransferase
3wms.1.A 58.33 monomer BLAST X-ray 2.30 0.48 1.00 Alpha-cyclodextrin glucanotransferase4jcl.1.A 58.25 monomer HHblits X-ray 1.70 0.48 1.00 Cyclomaltodextrin glucanotransferase
3wms.1.A 58.46 monomer HHblits X-ray 2.30 0.48 1.00 Alpha-cyclodextrin glucanotransferase4jcm.1.A 56.36 monomer BLAST X-ray 1.65 0.47 0.98 Cyclodextrin glucanotransferase4jcm.1.A 55.93 monomer HHblits X-ray 1.65 0.47 0.98 Cyclodextrin glucanotransferase1qho.1.A 49.16 monomer BLAST X-ray 1.70 0.44 0.99 ALPHA-AMYLASE1qho.1.A 46.75 monomer HHblits X-ray 1.70 0.43 0.99 ALPHA-AMYLASE3aib.1.A 18.34 monomer HHblits X-ray 3.09 0.29 0.83 Glucosyltransferase-SI1izk.1.A 24.20 monomer HHblits X-ray 2.20 0.33 0.78 amylase1uh3.1.A 24.20 monomer HHblits X-ray 2.60 0.33 0.78 alpha-amylase I2d0f.1.A 23.94 monomer HHblits X-ray 2.08 0.33 0.78 alpha-amylase I
3gbd.1.A 26.13 monomer HHblits X-ray 1.95 0.33 0.78 Sucrose isomerase SmuA fromProtaminobacter rubrum4e2o.1.A 26.83 monomer HHblits X-ray 2.10 0.34 0.77 Alpha-amylase1izj.1.A 24.20 monomer HHblits X-ray 2.20 0.33 0.78 amylase
4how.1.A 24.80 monomer HHblits X-ray 1.70 0.33 0.78 Sucrose isomerase1wza.1.A 27.57 monomer HHblits X-ray 1.60 0.34 0.77 alpha-amylase A4hph.1.A 24.80 monomer HHblits X-ray 1.70 0.33 0.78 Sucrose isomerase4hoz.1.A 25.13 monomer HHblits X-ray 2.00 0.33 0.78 Sucrose isomerase4hox.1.A 24.80 monomer HHblits X-ray 2.00 0.33 0.78 Sucrose isomerase4h2c.1.A 23.81 monomer HHblits X-ray 1.70 0.32 0.79 Sucrose isomerase2ze0.1.A 24.60 homo-dimer HHblits X-ray 2.00 0.33 0.78 Alpha-glucosidase4lxf.1.A 24.93 homo-tetramer HHblits X-ray 2.60 0.32 0.79 Trehalose synthase
4hp5.1.A 24.60 monomer HHblits X-ray 2.00 0.32 0.78 Sucrose isomerase1uh4.1.A 23.26 monomer HHblits X-ray 1.80 0.32 0.78 alpha-amylase I3dhp.1.A 19.63 monomer HHblits X-ray 1.50 0.31 0.80 Alpha-amylase 11m53.1.A 24.40 monomer HHblits X-ray 2.20 0.32 0.79 Isomaltulose Synthase1nm9.1.A 19.37 monomer HHblits X-ray 2.10 0.31 0.80 Alpha-amylase, salivary4gi6.1.A 24.27 monomer HHblits X-ray 2.15 0.32 0.78 Sucrose isomerase4gin.1.A 24.00 monomer HHblits X-ray 1.90 0.32 0.78 Sucrose isomerase2pwf.1.A 24.27 monomer HHblits X-ray 1.80 0.32 0.78 Sucrose isomerase1zjb.1.A 24.27 monomer HHblits X-ray 1.80 0.32 0.78 Trehalulose synthase2pwe.1.A 24.00 monomer HHblits X-ray 2.00 0.32 0.78 Sucrose isomerase4h8h.1.A 24.00 monomer HHblits X-ray 2.00 0.32 0.78 Sucrose isomerase4go8.1.A 24.27 monomer HHblits X-ray 2.15 0.32 0.78 Sucrose isomerase4h7v.1.A 24.00 monomer HHblits X-ray 1.80 0.32 0.78 Sucrose isomerase1kgw.1.A 19.90 monomer HHblits X-ray 2.10 0.30 0.80 ALPHA-AMYLASE, PANCREATIC3blp.1.A 20.00 monomer HHblits X-ray 1.60 0.31 0.79 Alpha-amylase 12pwh.1.A 24.33 monomer HHblits X-ray 2.00 0.32 0.78 Sucrose isomerase3blk.1.A 20.00 monomer HHblits X-ray 2.00 0.31 0.79 Alpha-amylase 11kxt.1.A 20.73 hetero-oligomer HHblits X-ray 2.00 0.31 0.79 ALPHA-AMYLASE, PANCREATIC
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
3zo9.1.A 22.43 homo-tetramer HHblits X-ray 1.84 0.31 0.79 TREHALOSE SYNTHASE/AMYLASETRES1ppi.1.A 20.47 monomer HHblits X-ray 2.20 0.30 0.79 ALPHA-AMYLASE4go9.1.A 24.33 monomer HHblits X-ray 2.20 0.32 0.78 Sucrose isomerase1vah.1.A 20.73 monomer HHblits X-ray 2.40 0.30 0.79 Alpha-amylase, pancreatic3cpu.1.A 19.95 monomer HHblits X-ray 2.00 0.30 0.79 ALPHA-AMYLASE1ose.1.A 20.47 monomer HHblits X-ray 2.30 0.30 0.79 PORCINE ALPHA-AMYLASE1jfh.1.A 20.73 monomer HHblits X-ray 2.03 0.30 0.79 ALPHA-AMYLASE
4m56.1.A 21.69 monomer HHblits X-ray 2.30 0.31 0.79 Oligo-1,6-glucosidase 11b2y.1.A 19.69 monomer HHblits X-ray 3.20 0.30 0.79 PROTEIN (ALPHA-AMYLASE)1pif.1.A 20.21 monomer HHblits X-ray 2.30 0.30 0.79 ALPHA-AMYLASE1jxj.1.A 19.74 monomer HHblits X-ray 1.99 0.31 0.79 Alpha-amylase, salivary
1kgu.1.A 19.37 monomer HHblits X-ray 2.00 0.30 0.80 ALPHA-AMYLASE, PANCREATIC1bvn.1.A 20.21 hetero-oligomer HHblits X-ray 2.50 0.30 0.79 PROTEIN (ALPHA-AMYLASE)1ua3.1.A 20.47 monomer HHblits X-ray 2.01 0.30 0.79 Alpha-amylase, pancreatic3ole.1.A 19.69 monomer HHblits X-ray 1.55 0.30 0.79 Pancreatic alpha-amylase1mfv.1.A 19.74 monomer HHblits X-ray 2.00 0.31 0.79 alpha-amylase, salivary1mfu.1.A 19.74 monomer HHblits X-ray 2.00 0.31 0.79 alpha-amylase, Salivary1wo2.1.A 20.47 monomer HHblits X-ray 2.01 0.30 0.79 Alpha-amylase, pancreatic1viw.1.A 22.13 hetero-oligomer HHblits X-ray 3.00 0.32 0.78 ALPHA-AMYLASE1q4n.1.A 19.47 monomer HHblits X-ray 2.07 0.31 0.79 Alpha-amylase, salivary4mb1.1.A 21.75 monomer HHblits X-ray 1.40 0.31 0.79 Oligo-1,6-glucosidase 13l2m.1.A 20.90 monomer HHblits X-ray 1.97 0.31 0.79 Pancreatic alpha-amylase1z32.1.A 20.37 monomer HHblits X-ray 1.60 0.31 0.79 Salivary alpha-amylase1clv.1.A 21.87 hetero-oligomer HHblits X-ray 2.00 0.32 0.78 PROTEIN (ALPHA-AMYLASE)1bsi.1.A 20.00 monomer HHblits X-ray 2.00 0.30 0.79 ALPHA-AMYLASE4gqq.1.A 20.00 monomer HHblits X-ray 1.35 0.30 0.79 Pancreatic alpha-amylase2wcs.1.A 23.18 homo-dimer HHblits X-ray 2.80 0.32 0.77 ALPHA AMYLASE, CATALYTIC REGION1xh1.1.A 20.05 monomer HHblits X-ray 2.03 0.31 0.79 Alpha-amylase, pancreatic1kbb.1.A 20.05 monomer HHblits X-ray 1.90 0.31 0.79 ALPHA-AMYLASE, PANCREATIC2aaa.1.A 22.99 monomer HHblits X-ray 2.12 0.32 0.78 ALPHA-AMYLASE
1dhk.1.A 20.90 hetero-oligomer HHblits X-ray 1.85 0.31 0.79 PORCINE PANCREATIC ALPHA-AMYLASE1j0i.1.B 24.12 homo-dimer HHblits X-ray 2.40 0.33 0.77 neopullulanase1j0i.1.A 24.12 homo-dimer HHblits X-ray 2.40 0.33 0.77 neopullulanase
1kb3.1.A 20.63 monomer HHblits X-ray 2.10 0.31 0.79 ALPHA-AMYLASE, PANCREATIC1j0k.1.A 23.85 homo-dimer HHblits X-ray 3.20 0.33 0.77 neopullulanase
4maz.1.A 22.19 monomer HHblits X-ray 1.60 0.31 0.78 Oligo-1,6-glucosidase 12gvy.1.A 21.72 monomer HHblits X-ray 1.80 0.32 0.78 Alpha-amylase A1wzk.1.A 22.64 homo-dimer HHblits X-ray 2.30 0.32 0.77 Alpha-amylase II1wzl.1.A 22.64 homo-dimer HHblits X-ray 2.00 0.32 0.77 Alpha-amylase II1uok.1.A 22.46 monomer HHblits X-ray 2.00 0.31 0.78 OLIGO-1,6-GLUCOSIDASE1kbk.1.A 20.11 monomer HHblits X-ray 1.90 0.31 0.79 ALPHA-AMYLASE, PANCREATIC1jf6.1.A 23.24 homo-dimer HHblits X-ray 3.20 0.32 0.77 ALPHA AMYLASE II1vfm.2.A 22.37 monomer HHblits X-ray 2.90 0.32 0.77 Neopullulanase 21vfu.2.A 22.37 monomer HHblits X-ray 3.10 0.32 0.77 Neopullulanase 21vfu.1.A 22.37 monomer HHblits X-ray 3.10 0.32 0.77 Neopullulanase 21bvz.1.A 22.97 monomer HHblits X-ray 2.60 0.32 0.77 PROTEIN (ALPHA-AMYLASE II)1ji2.1.A 22.97 homo-dimer HHblits X-ray 2.30 0.32 0.77 ALPHA-AMYLASE II
3a6o.1.A 22.97 monomer HHblits X-ray 2.80 0.32 0.77 Neopullulanase 21jf5.1.A 22.97 homo-dimer HHblits X-ray 3.20 0.32 0.77 ALPHA AMYLASE II
1wzm.1.A 22.70 homo-dimer HHblits X-ray 3.20 0.32 0.77 Alpha-amylase II1kgx.1.A 20.16 monomer HHblits X-ray 2.00 0.31 0.79 ALPHA-AMYLASE, PANCREATIC1g1y.1.B 22.70 homo-dimer HHblits X-ray 3.00 0.32 0.77 ALPHA-AMYLASE II1g1y.1.A 22.70 homo-dimer HHblits X-ray 3.00 0.32 0.77 ALPHA-AMYLASE II
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
2d2o.1.B 22.70 homo-dimer HHblits X-ray 2.10 0.32 0.77 Neopullulanase 21jib.2.A 22.70 monomer HHblits X-ray 3.30 0.32 0.77 NEOPULLULANASE1jib.1.A 22.70 monomer HHblits X-ray 3.30 0.32 0.77 NEOPULLULANASE1jl8.1.A 22.70 monomer HHblits X-ray 3.20 0.32 0.77 ALPHA-AMYLASE II
1vb9.1.A 22.70 monomer HHblits X-ray 2.20 0.32 0.77 alpha-amylase II4m8u.1.A 22.25 monomer HHblits X-ray 1.45 0.31 0.78 Oligo-1,6-glucosidase 14aee.1.A 23.22 monomer HHblits X-ray 2.28 0.33 0.76 ALPHA AMYLASE, CATALYTIC REGION1hvx.1.A 22.79 monomer HHblits X-ray 2.00 0.31 0.78 ALPHA-AMYLASE1sma.1.A 22.76 homo-dimer HHblits X-ray 2.80 0.32 0.77 MALTOGENIC AMYLASE2taa.1.A 21.77 monomer HHblits X-ray 3.00 0.31 0.77 TAKA-AMYLASE A1ea9.1.A 22.76 homo-dimer HHblits X-ray 3.20 0.32 0.77 CYCLOMALTODEXTRINASE1ea9.2.A 22.76 homo-dimer HHblits X-ray 3.20 0.32 0.77 CYCLOMALTODEXTRINASE1gvi.1.A 22.49 homo-dimer HHblits X-ray 3.30 0.32 0.77 MALTOGENIC AMYLASE
3vm7.1.A 23.51 monomer HHblits X-ray 2.25 0.32 0.77 Alpha-amylase3ede.1.A 25.62 homo-dimer BLAST X-ray 1.71 0.33 0.76 Cyclomaltodextrinase3edj.1.A 25.62 homo-dimer BLAST X-ray 1.69 0.33 0.76 Cyclomaltodextrinase3edd.1.A 25.62 homo-dimer BLAST X-ray 2.65 0.33 0.76 Cyclomaltodextrinase1h3g.1.A 25.62 monomer BLAST X-ray 2.10 0.33 0.76 CYCLOMALTODEXTRINASE3bh4.1.A 19.84 monomer HHblits X-ray 1.40 0.31 0.78 Alpha-amylase3axh.1.A 18.57 monomer HHblits X-ray 1.80 0.30 0.79 Oligo-1,6-glucosidase IMA11vjs.1.A 18.77 monomer HHblits X-ray 1.70 0.31 0.78 ALPHA-AMYLASE2gvy.1.A 28.98 monomer BLAST X-ray 1.80 0.35 0.73 Alpha-amylase A1e3z.1.A 18.77 monomer HHblits X-ray 1.93 0.31 0.78 ALPHA-AMYLASE1ud4.1.A 21.89 monomer HHblits X-ray 2.15 0.31 0.77 amylase3aj7.1.A 18.93 monomer HHblits X-ray 1.30 0.30 0.78 Oligo-1,6-glucosidase
1mw2.1.A 21.93 monomer HHblits X-ray 2.10 0.31 0.78 amylosucrase1jd9.1.A 20.86 monomer HHblits X-ray 2.50 0.30 0.78 ALPHA-AMYLASE1ud3.1.A 21.62 monomer HHblits X-ray 2.15 0.31 0.77 amylase4flo.1.A 21.93 monomer HHblits X-ray 2.20 0.30 0.78 Amylosucrase1bli.1.A 18.77 monomer HHblits X-ray 1.90 0.31 0.78 ALPHA-AMYLASE1bf2.1.A 21.39 monomer HHblits X-ray 2.00 0.30 0.78 ISOAMYLASE4aie.1.A 21.98 monomer HHblits X-ray 2.05 0.31 0.78 GLUCAN 1,6-ALPHA-GLUCOSIDASE4fls.1.A 21.72 monomer HHblits X-ray 2.30 0.31 0.78 Amylosucrase2taa.1.A 28.41 monomer BLAST X-ray 3.00 0.35 0.73 TAKA-AMYLASE A1b0i.1.A 20.00 monomer HHblits X-ray 2.40 0.30 0.78 PROTEIN (ALPHA-AMYLASE)2z1k.1.A 21.58 monomer HHblits X-ray 2.30 0.32 0.76 (Neo)pullulanase1mvy.1.A 21.12 monomer HHblits X-ray 2.00 0.30 0.78 amylosucrase4flq.1.A 21.72 monomer HHblits X-ray 2.50 0.30 0.78 Amylosucrase2die.1.A 20.27 monomer HHblits X-ray 2.10 0.31 0.77 amylase3ueq.1.A 21.39 monomer HHblits X-ray 1.85 0.30 0.78 Amylosucrase1ob0.1.A 18.82 monomer HHblits X-ray 1.83 0.31 0.77 ALPHA-AMYLASE4flr.1.A 21.45 monomer HHblits X-ray 2.40 0.30 0.78 Amylosucrase
1wpc.1.A 19.68 monomer HHblits X-ray 1.90 0.31 0.77 Glucan 1,4-alpha-maltohexaosidase1jd7.1.A 20.05 monomer HHblits X-ray 2.25 0.30 0.78 ALPHA-AMYLASE3ede.1.A 22.28 homo-dimer HHblits X-ray 1.71 0.31 0.77 Cyclomaltodextrinase1h3g.1.A 23.01 monomer HHblits X-ray 2.10 0.32 0.76 CYCLOMALTODEXTRINASE3vm5.1.A 20.16 monomer HHblits X-ray 2.85 0.30 0.77 alpha-amylase3edd.1.A 21.68 homo-dimer HHblits X-ray 2.65 0.31 0.77 Cyclomaltodextrinase2gjp.1.A 18.65 monomer HHblits X-ray 1.90 0.31 0.77 alpha-amylase1kxh.1.A 20.81 monomer HHblits X-ray 2.30 0.31 0.77 alpha-amylase1w9x.1.A 18.38 monomer HHblits X-ray 2.10 0.30 0.77 ALPHA AMYLASE1g94.1.A 20.22 monomer HHblits X-ray 1.74 0.30 0.77 ALPHA-AMYLASE2zic.1.A 19.84 monomer HHblits X-ray 2.20 0.30 0.78 Dextran glucosidase2zid.1.A 19.57 monomer HHblits X-ray 2.20 0.30 0.78 Dextran glucosidase4ays.1.A 17.72 monomer HHblits X-ray 3.15 0.29 0.79 AMYLOSUCRASE
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8 de 28 28/11/2014 14:40
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
1jgi.1.A 21.14 monomer HHblits X-ray 2.00 0.30 0.77 amylosucrase3edj.1.A 21.92 homo-dimer HHblits X-ray 1.69 0.31 0.76 Cyclomaltodextrinase3uer.1.A 16.84 homo-dimer HHblits X-ray 2.10 0.28 0.79 Amylosucrase1uh4.1.A 27.38 monomer BLAST X-ray 1.80 0.35 0.72 alpha-amylase I1uh3.1.A 29.24 monomer BLAST X-ray 2.60 0.36 0.71 alpha-amylase I2d0f.1.A 28.95 monomer BLAST X-ray 2.08 0.36 0.71 alpha-amylase I1izj.1.A 28.65 monomer BLAST X-ray 2.20 0.36 0.71 amylase1izk.1.A 28.95 monomer BLAST X-ray 2.20 0.36 0.71 amylase3czl.1.A 17.91 monomer HHblits X-ray 2.00 0.28 0.78 sucrose hydrolase3czk.1.A 17.91 monomer HHblits X-ray 2.20 0.28 0.78 Sucrose hydrolase3cze.1.A 17.87 monomer HHblits X-ray 1.90 0.28 0.78 Sucrose hydrolase2die.1.A 27.70 monomer BLAST X-ray 2.10 0.35 0.71 amylase3bcd.1.A 21.61 monomer HHblits X-ray 2.20 0.31 0.75 Alpha amylase, catalytic region2fhc.1.A 17.86 monomer HHblits X-ray 1.85 0.30 0.76 pullulanase2fhf.1.A 17.86 monomer HHblits X-ray 1.65 0.30 0.76 pullulanase2vnc.1.A 16.71 homo-tetramer HHblits X-ray 3.00 0.29 0.76 GLYCOGEN OPERON PROTEIN GLGX2vuy.1.A 16.71 homo-hexamer HHblits X-ray 3.00 0.29 0.76 GLYCOGEN OPERON PROTEIN GLGX2vnc.1.B 16.71 homo-tetramer HHblits X-ray 3.00 0.29 0.76 GLYCOGEN OPERON PROTEIN GLGX1clv.1.A 27.54 hetero-oligomer BLAST X-ray 2.00 0.34 0.72 PROTEIN (ALPHA-AMYLASE)
2wcs.1.A 31.14 homo-dimer BLAST X-ray 2.80 0.36 0.70 ALPHA AMYLASE, CATALYTIC REGION2e8z.1.A 16.76 monomer HHblits X-ray 2.20 0.29 0.76 AmyX protein1viw.1.A 27.25 hetero-oligomer BLAST X-ray 3.00 0.34 0.72 ALPHA-AMYLASE2yoc.1.A 17.36 homo-tetramer HHblits X-ray 2.88 0.29 0.76 PULLULANASE2yoc.1.B 17.36 homo-tetramer HHblits X-ray 2.88 0.29 0.76 PULLULANASE3dhu.1.A 20.85 monomer HHblits X-ray 2.00 0.31 0.74 Alpha-amylase1b0i.1.A 27.57 monomer BLAST X-ray 2.40 0.34 0.71 PROTEIN (ALPHA-AMYLASE)1g94.1.A 27.57 monomer BLAST X-ray 1.74 0.34 0.71 ALPHA-AMYLASE1jd9.1.A 27.57 monomer BLAST X-ray 2.50 0.34 0.71 ALPHA-AMYLASE1jd7.1.A 27.57 monomer BLAST X-ray 2.25 0.34 0.71 ALPHA-AMYLASE1kxh.1.A 27.27 monomer BLAST X-ray 2.30 0.34 0.71 alpha-amylase3amk.1.A 18.08 monomer HHblits X-ray 1.90 0.28 0.76 Os06g0726400 protein4j3s.1.A 14.52 monomer HHblits X-ray 1.75 0.28 0.76 Limit dextrinase1kgu.1.A 26.55 monomer BLAST X-ray 2.00 0.34 0.71 ALPHA-AMYLASE, PANCREATIC2y5e.1.A 14.56 monomer HHblits X-ray 2.49 0.29 0.76 LIMIT DEXTRINASE1b2y.1.A 26.55 monomer BLAST X-ray 3.20 0.34 0.71 PROTEIN (ALPHA-AMYLASE)4gqq.1.A 26.55 monomer BLAST X-ray 1.35 0.34 0.71 Pancreatic alpha-amylase1bsi.1.A 26.55 monomer BLAST X-ray 2.00 0.34 0.71 ALPHA-AMYLASE1kgw.1.A 26.55 monomer BLAST X-ray 2.10 0.34 0.71 ALPHA-AMYLASE, PANCREATIC4aee.1.A 26.79 monomer BLAST X-ray 2.28 0.35 0.70 ALPHA AMYLASE, CATALYTIC REGION4j3w.1.A 13.97 monomer HHblits X-ray 1.67 0.28 0.76 Limit dextrinase1kgx.1.A 26.25 monomer BLAST X-ray 2.00 0.34 0.71 ALPHA-AMYLASE, PANCREATIC
3vu2.1.A 17.81 monomer HHblits X-ray 2.23 0.28 0.76 1,4-alpha-glucan-branching enzyme,chloroplastic/amyloplastic3cpu.1.A 26.25 monomer BLAST X-ray 2.00 0.34 0.71 ALPHA-AMYLASE1xh1.1.A 26.25 monomer BLAST X-ray 2.03 0.34 0.71 Alpha-amylase, pancreatic1kb3.1.A 26.25 monomer BLAST X-ray 2.10 0.34 0.71 ALPHA-AMYLASE, PANCREATIC1kbk.1.A 26.25 monomer BLAST X-ray 1.90 0.34 0.71 ALPHA-AMYLASE, PANCREATIC
2wpg.1.A 17.07 monomer HHblits X-ray 1.90 0.27 0.77 AMYLOSUCRASE OR ALPHAAMYLASE2wan.1.A 15.83 monomer HHblits X-ray 1.65 0.29 0.75 PULLULANASE3dc0.1.A 22.64 monomer HHblits X-ray 2.78 0.32 0.73 alpha-amylase
2ya0.1.A 17.17 monomer HHblits X-ray 1.85 0.29 0.75 PUTATIVE ALKALINEAMYLOPULLULANASE3aml.1.A 18.46 monomer HHblits X-ray 1.70 0.29 0.76 Os06g0726400 protein
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
2ya1.1.A 17.50 monomer HHblits X-ray 2.25 0.29 0.75 PUTATIVE ALKALINEAMYLOPULLULANASE1ua7.1.A 23.21 monomer HHblits X-ray 2.21 0.32 0.73 Alpha-amylase
2ya2.1.A 16.90 monomer HHblits X-ray 2.37 0.29 0.75 PUTATIVE ALKALINEAMYLOPULLULANASE
1bag.1.A 22.92 monomer HHblits X-ray 2.50 0.32 0.73 ALPHA-1,4-GLUCAN-4-GLUCANOHYDROLASE3wdj.1.A 17.93 monomer HHblits X-ray 2.22 0.30 0.74 Type I pullulanase1m7x.1.A 17.93 monomer HHblits X-ray 2.30 0.29 0.74 1,4-alpha-glucan Branching Enzyme3faw.1.A 17.45 monomer HHblits X-ray 2.10 0.28 0.75 Reticulocyte binding protein1kbb.1.A 27.03 monomer BLAST X-ray 1.90 0.35 0.69 ALPHA-AMYLASE, PANCREATIC1mwo.1.A 23.28 monomer HHblits X-ray 2.20 0.31 0.73 alpha amylase2aaa.1.A 25.75 monomer BLAST X-ray 2.12 0.34 0.70 ALPHA-AMYLASE3ole.1.A 28.01 monomer BLAST X-ray 1.55 0.35 0.69 Pancreatic alpha-amylase3k1d.1.A 18.54 monomer HHblits X-ray 2.33 0.29 0.74 1,4-alpha-glucan-branching enzyme3qgv.1.A 21.49 monomer HHblits X-ray 2.10 0.31 0.73 Alpha amylase
4aef.1.A 25.75 monomer BLAST X-ray 2.34 0.34 0.70 NEOPULLULANASE (ALPHA-AMYLASEII)2wsk.1.A 17.83 monomer HHblits X-ray 2.25 0.28 0.75 GLYCOGEN DEBRANCHING ENZYME3qgv.1.A 28.61 monomer BLAST X-ray 2.10 0.34 0.69 Alpha amylase4gkl.1.A 17.43 monomer HHblits X-ray 2.40 0.30 0.73 Alpha-amylase1j0i.1.A 27.49 homo-dimer BLAST X-ray 2.40 0.34 0.69 neopullulanase1j0i.1.B 27.49 homo-dimer BLAST X-ray 2.40 0.34 0.69 neopullulanase1j0k.1.A 27.19 homo-dimer BLAST X-ray 3.20 0.34 0.69 neopullulanase
4bzy.1.A 17.60 monomer HHblits X-ray 2.75 0.28 0.75 1,4-ALPHA-GLUCAN-BRANCHINGENZYME3dhu.1.A 27.36 monomer BLAST X-ray 2.00 0.35 0.69 Alpha-amylase
1gju.1.A 17.42 homo-dimer HHblits X-ray 2.40 0.28 0.74 MALTODEXTRINGLYCOSYLTRANSFERASE
1bag.1.A 25.53 monomer BLAST X-ray 2.50 0.33 0.69 ALPHA-1,4-GLUCAN-4-GLUCANOHYDROLASE
4cn1.1.A 19.20 homo-dimer HHblits X-ray 2.55 0.30 0.73ALPHA-1,4-GLUCAN\: MALTOSE-
1-PHOSPHATEMALTOSYLTRANSFERASE 1
1ua7.1.A 25.53 monomer BLAST X-ray 2.21 0.33 0.69 Alpha-amylase
3zt5.1.A 19.20 homo-dimer HHblits X-ray 2.09 0.30 0.73 PUTATIVE GLUCANOHYDROLASEPEP1A4e2o.1.A 32.49 monomer BLAST X-ray 2.10 0.37 0.66 Alpha-amylase
4cn4.1.A 18.91 homo-dimer HHblits X-ray 2.40 0.29 0.73ALPHA-1,4-GLUCAN\:MALTOSE-
1-PHOSPHATEMALTOSYLTRANSFERASE 1
4aef.1.A 23.58 monomer HHblits X-ray 2.34 0.32 0.70 NEOPULLULANASE (ALPHA-AMYLASEII)3dc0.1.A 24.62 monomer BLAST X-ray 2.78 0.33 0.69 alpha-amylase1ea9.2.A 29.65 homo-dimer BLAST X-ray 3.20 0.36 0.66 CYCLOMALTODEXTRINASE1ea9.1.A 29.65 homo-dimer BLAST X-ray 3.20 0.36 0.66 CYCLOMALTODEXTRINASE3m07.1.A 17.68 monomer HHblits X-ray 1.40 0.29 0.72 Putative alpha amylase3vgb.1.A 19.76 monomer HHblits X-ray 2.65 0.29 0.71 Malto-oligosyltrehalose trehalohydrolase
1eh9.1.A 19.76 homo-dimer HHblits X-ray 3.00 0.29 0.71 GLYCOSYLTREHALOSETREHALOHYDROLASE3vgg.1.A 18.82 monomer HHblits X-ray 2.66 0.29 0.71 Malto-oligosyltrehalose trehalohydrolase
1eha.1.A 19.47 homo-dimer HHblits X-ray 3.00 0.29 0.71 GLYCOSYLTREHALOSETREHALOHYDROLASE3vgd.1.A 19.17 monomer HHblits X-ray 2.40 0.29 0.71 Malto-oligosyltrehalose trehalohydrolase3vgf.1.A 19.17 monomer HHblits X-ray 2.30 0.29 0.71 Malto-oligosyltrehalose trehalohydrolase1sma.1.A 30.65 homo-dimer BLAST X-ray 2.80 0.36 0.65 MALTOGENIC AMYLASE1gvi.1.A 30.32 homo-dimer BLAST X-ray 3.30 0.36 0.65 MALTOGENIC AMYLASE2qps.1.A 20.91 monomer HHblits X-ray 2.20 0.30 0.69 Alpha-amylase type A isozyme
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10 de 28 28/11/2014 14:40
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
3bsh.1.A 20.00 monomer HHblits X-ray 3.00 0.30 0.69 Alpha-amylase type A isozyme1rpk.1.A 20.61 monomer HHblits X-ray 2.00 0.30 0.69 Alpha-amylase type 1 isozyme3bsg.1.A 20.06 monomer HHblits X-ray 1.95 0.30 0.69 Alpha-amylase type A isozyme1rp9.1.A 19.76 monomer HHblits X-ray 2.00 0.30 0.69 Alpha-amylase type 1 isozyme1bvz.1.A 25.88 monomer BLAST X-ray 2.60 0.34 0.65 PROTEIN (ALPHA-AMYLASE II)3a6o.1.A 25.88 monomer BLAST X-ray 2.80 0.34 0.65 Neopullulanase 21ji2.1.A 25.88 homo-dimer BLAST X-ray 2.30 0.34 0.65 ALPHA-AMYLASE II
1wzm.1.A 25.56 homo-dimer BLAST X-ray 3.20 0.34 0.65 Alpha-amylase II1wzk.1.A 25.56 homo-dimer BLAST X-ray 2.30 0.34 0.65 Alpha-amylase II1jib.1.A 25.56 monomer BLAST X-ray 3.30 0.34 0.65 NEOPULLULANASE1jl8.1.A 25.56 monomer BLAST X-ray 3.20 0.34 0.65 ALPHA-AMYLASE II
1vb9.1.A 25.56 monomer BLAST X-ray 2.20 0.34 0.65 alpha-amylase II1jib.2.A 25.56 monomer BLAST X-ray 3.30 0.34 0.65 NEOPULLULANASE
2d2o.1.B 25.56 homo-dimer BLAST X-ray 2.10 0.34 0.65 Neopullulanase 21wzl.1.A 25.56 homo-dimer BLAST X-ray 2.00 0.34 0.65 Alpha-amylase II3wn6.1.A 19.51 monomer HHblits X-ray 2.16 0.30 0.68 Alpha-amylase1g1y.1.B 26.05 homo-dimer BLAST X-ray 3.00 0.34 0.65 ALPHA-AMYLASE II1g1y.1.A 26.05 homo-dimer BLAST X-ray 3.00 0.34 0.65 ALPHA-AMYLASE II1jf5.1.A 25.24 homo-dimer BLAST X-ray 3.20 0.34 0.65 ALPHA AMYLASE II1vfu.1.A 25.24 monomer BLAST X-ray 3.10 0.34 0.65 Neopullulanase 21vfm.2.A 25.24 monomer BLAST X-ray 2.90 0.34 0.65 Neopullulanase 21vfu.2.A 25.24 monomer BLAST X-ray 3.10 0.34 0.65 Neopullulanase 21jf6.1.A 25.24 homo-dimer BLAST X-ray 3.20 0.33 0.65 ALPHA AMYLASE II
2qpu.1.A 20.31 monomer HHblits X-ray 1.70 0.30 0.68 Alpha-amylase type A isozyme
1bg9.1.A 19.69 homo-dimer HHblits X-ray 2.80 0.30 0.68 1,4-ALPHA-D-GLUCANGLUCANOHYDROLASE1lwh.1.A 22.40 homo-dimer HHblits X-ray 2.60 0.31 0.66 4-alpha-glucanotransferase1lwj.1.B 22.40 homo-dimer HHblits X-ray 2.50 0.31 0.66 4-ALPHA-GLUCANOTRANSFERASE4gkl.1.A 23.87 monomer BLAST X-ray 2.40 0.33 0.65 Alpha-amylase4j7r.1.A 20.56 homo-dimer HHblits X-ray 2.30 0.30 0.67 Isoamylase
2dh2.1.A 18.07 monomer HHblits X-ray 2.10 0.29 0.67 4F2 cell-surface antigen heavy chain2dh3.2.A 18.07 monomer HHblits X-ray 2.80 0.29 0.67 4F2 cell-surface antigen heavy chain2dh3.1.A 18.07 monomer HHblits X-ray 2.80 0.29 0.67 4F2 cell-surface antigen heavy chain2z1k.1.A 29.21 monomer BLAST X-ray 2.30 0.35 0.61 (Neo)pullulanase1jdc.1.A 18.33 monomer HHblits X-ray 1.90 0.29 0.65 1,4-ALPHA MALTOTETRAHYDROLASE
1qi3.1.A 18.65 monomer HHblits X-ray 2.00 0.29 0.65 PROTEIN(EXO-MALTOTETRAOHYDROLASE)
1qi5.1.A 18.33 monomer HHblits X-ray 2.00 0.29 0.65 PROTEIN(EXO-MALTOTETRAOHYDROLASE)
2amg.1.A 18.71 monomer HHblits X-ray 2.00 0.29 0.65 1,4-ALPHA-D-GLUCANMALTOTETRAHYDROLASE
1gcy.1.A 18.77 monomer HHblits X-ray 1.60 0.30 0.64 GLUCAN 1,4-ALPHA-MALTOTETRAHYDROLASE
1qpk.1.A 18.06 monomer HHblits X-ray 2.00 0.29 0.65 PROTEIN (MALTOTETRAOSE-FORMING AMYLASE)3kll.1.A 19.81 monomer HHblits X-ray 2.00 0.30 0.64 Glucansucrase
4ayg.1.A 19.81 monomer HHblits X-ray 2.00 0.30 0.64 GLUCANSUCRASE4aie.1.A 27.43 monomer BLAST X-ray 2.05 0.35 0.60 GLUCAN 1,6-ALPHA-GLUCOSIDASE2gdv.1.B 15.82 homo-dimer HHblits X-ray 2.00 0.27 0.66 sucrose phosphorylase2gdv.1.A 15.82 homo-dimer HHblits X-ray 2.00 0.27 0.66 sucrose phosphorylase2gdu.1.A 15.87 homo-dimer HHblits X-ray 2.10 0.27 0.66 sucrose phosphorylase1lwj.1.B 28.83 homo-dimer BLAST X-ray 2.50 0.35 0.59 4-ALPHA-GLUCANOTRANSFERASE1lwh.1.A 28.83 homo-dimer BLAST X-ray 2.60 0.35 0.59 4-alpha-glucanotransferase1wza.1.A 36.09 monomer BLAST X-ray 1.60 0.39 0.55 alpha-amylase A
2bxz.1.A 19.33 monomer HHblits X-ray 1.75 0.29 0.63 MALTOOLIGOSYLTREHALOSETREHALOHYDROLASE
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11 de 28 28/11/2014 14:40
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
1qi4.1.A 19.13 monomer HHblits X-ray 2.00 0.29 0.62 PROTEIN(EXO-MALTOTETRAOHYDROLASE)3vm7.1.A 31.00 monomer BLAST X-ray 2.25 0.35 0.56 Alpha-amylase3wdj.1.A 25.00 monomer BLAST X-ray 2.22 0.34 0.57 Type I pullulanase4m8u.1.A 27.78 monomer BLAST X-ray 1.45 0.35 0.56 Oligo-1,6-glucosidase 14mb1.1.A 27.41 monomer BLAST X-ray 1.40 0.35 0.56 Oligo-1,6-glucosidase 14maz.1.A 27.41 monomer BLAST X-ray 1.60 0.35 0.56 Oligo-1,6-glucosidase 14m56.1.A 27.41 monomer BLAST X-ray 2.30 0.35 0.56 Oligo-1,6-glucosidase 1
3gbd.1.A 31.09 monomer BLAST X-ray 1.95 0.35 0.56 Sucrose isomerase SmuA fromProtaminobacter rubrum3hz3.1.A 19.51 monomer HHblits X-ray 2.22 0.30 0.60 Glucansucrase3k8k.1.A 25.27 monomer HHblits X-ray 2.20 0.32 0.58 Alpha-amylase, susG3k8l.1.A 24.91 monomer HHblits X-ray 2.30 0.32 0.58 Alpha-amylase, susG2ze0.1.A 28.68 homo-dimer BLAST X-ray 2.00 0.35 0.55 Alpha-glucosidase4how.1.A 33.20 monomer BLAST X-ray 1.70 0.37 0.54 Sucrose isomerase4hph.1.A 33.20 monomer BLAST X-ray 1.70 0.37 0.54 Sucrose isomerase4hox.1.A 33.20 monomer BLAST X-ray 2.00 0.37 0.54 Sucrose isomerase4hp5.1.A 33.20 monomer BLAST X-ray 2.00 0.37 0.54 Sucrose isomerase4hoz.1.A 32.43 monomer BLAST X-ray 2.00 0.36 0.54 Sucrose isomerase
1bpl.1.B 18.41 hetero-oligomer HHblits X-ray 2.20 0.31 0.58 ALPHA-1,4-GLUCAN-4-GLUCANOHYDROLASE2zic.1.A 26.52 monomer BLAST X-ray 2.20 0.34 0.55 Dextran glucosidase4h8h.1.A 30.12 monomer BLAST X-ray 2.00 0.35 0.54 Sucrose isomerase2pwe.1.A 30.12 monomer BLAST X-ray 2.00 0.35 0.54 Sucrose isomerase4gin.1.A 30.12 monomer BLAST X-ray 1.90 0.35 0.54 Sucrose isomerase4h2c.1.A 30.12 monomer BLAST X-ray 1.70 0.35 0.54 Sucrose isomerase4go9.1.A 30.12 monomer BLAST X-ray 2.20 0.35 0.54 Sucrose isomerase2pwh.1.A 30.12 monomer BLAST X-ray 2.00 0.35 0.54 Sucrose isomerase1zjb.1.A 30.12 monomer BLAST X-ray 1.80 0.35 0.54 Trehalulose synthase4go8.1.A 30.12 monomer BLAST X-ray 2.15 0.35 0.54 Sucrose isomerase2pwf.1.A 29.73 monomer BLAST X-ray 1.80 0.35 0.54 Sucrose isomerase4h7v.1.A 29.73 monomer BLAST X-ray 1.80 0.35 0.54 Sucrose isomerase1m53.1.A 29.12 monomer BLAST X-ray 2.20 0.35 0.54 Isomaltulose Synthase4gi6.1.A 29.96 monomer BLAST X-ray 2.15 0.35 0.54 Sucrose isomerase1ud4.1.A 31.08 monomer BLAST X-ray 2.15 0.37 0.52 amylase1ud3.1.A 31.08 monomer BLAST X-ray 2.15 0.37 0.52 amylase2e8z.1.A 30.16 monomer BLAST X-ray 2.20 0.37 0.52 AmyX protein1ua3.1.A 30.52 monomer BLAST X-ray 2.01 0.36 0.52 Alpha-amylase, pancreatic1vah.1.A 30.52 monomer BLAST X-ray 2.40 0.36 0.52 Alpha-amylase, pancreatic1wo2.1.A 30.52 monomer BLAST X-ray 2.01 0.36 0.52 Alpha-amylase, pancreatic3l2m.1.A 30.12 monomer BLAST X-ray 1.97 0.36 0.52 Pancreatic alpha-amylase1bvn.1.A 30.12 hetero-oligomer BLAST X-ray 2.50 0.36 0.52 PROTEIN (ALPHA-AMYLASE)1pif.1.A 30.12 monomer BLAST X-ray 2.30 0.36 0.52 ALPHA-AMYLASE1kxt.1.A 30.12 hetero-oligomer BLAST X-ray 2.00 0.36 0.52 ALPHA-AMYLASE, PANCREATIC1jfh.1.A 30.12 monomer BLAST X-ray 2.03 0.36 0.52 ALPHA-AMYLASE1ose.1.A 29.72 monomer BLAST X-ray 2.30 0.36 0.52 PORCINE ALPHA-AMYLASE1ppi.1.A 29.72 monomer BLAST X-ray 2.20 0.36 0.52 ALPHA-AMYLASE
1dhk.1.A 29.72 hetero-oligomer BLAST X-ray 1.85 0.36 0.52 PORCINE PANCREATIC ALPHA-AMYLASE1hvx.1.A 31.69 monomer BLAST X-ray 2.00 0.36 0.51 ALPHA-AMYLASE1bli.1.A 27.24 monomer BLAST X-ray 1.90 0.35 0.51 ALPHA-AMYLASE
1ob0.1.A 26.42 monomer BLAST X-ray 1.83 0.34 0.51 ALPHA-AMYLASE1vjs.1.A 26.23 monomer BLAST X-ray 1.70 0.35 0.51 ALPHA-AMYLASE1e3z.1.A 25.31 monomer BLAST X-ray 1.93 0.35 0.51 ALPHA-AMYLASE1w9x.1.A 28.03 monomer BLAST X-ray 2.10 0.36 0.50 ALPHA AMYLASE
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12 de 28 28/11/2014 14:40
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
2gjp.1.A 28.03 monomer BLAST X-ray 1.90 0.36 0.50 alpha-amylase3bcd.1.A 30.29 monomer BLAST X-ray 2.20 0.35 0.50 Alpha amylase, catalytic region4fnu.1.D 15.18 homo-tetramer HHblits X-ray 3.60 0.28 0.54 Alpha-galactosidase AgaA4fnu.1.A 15.18 homo-tetramer HHblits X-ray 3.60 0.28 0.54 Alpha-galactosidase AgaA
1mwo.1.A 30.09 monomer BLAST X-ray 2.20 0.34 0.47 alpha amylase4amc.1.A 18.53 monomer HHblits X-ray 3.60 0.30 0.48 GLUCANSUCRASE
1eha.1.A 27.65 homo-dimer BLAST X-ray 3.00 0.35 0.45 GLYCOSYLTREHALOSETREHALOHYDROLASE3vgb.1.A 27.65 monomer BLAST X-ray 2.65 0.35 0.45 Malto-oligosyltrehalose trehalohydrolase
1eh9.1.A 27.65 homo-dimer BLAST X-ray 3.00 0.35 0.45 GLYCOSYLTREHALOSETREHALOHYDROLASE3dhp.1.A 25.36 monomer BLAST X-ray 1.50 0.34 0.44 Alpha-amylase 11z32.1.A 27.59 monomer BLAST X-ray 1.60 0.35 0.42 Salivary alpha-amylase1mfu.1.A 27.59 monomer BLAST X-ray 2.00 0.35 0.42 alpha-amylase, Salivary1mfv.1.A 27.59 monomer BLAST X-ray 2.00 0.35 0.42 alpha-amylase, salivary3blp.1.A 27.59 monomer BLAST X-ray 1.60 0.35 0.42 Alpha-amylase 13blk.1.A 27.59 monomer BLAST X-ray 2.00 0.35 0.42 Alpha-amylase 11jxj.1.A 27.59 monomer BLAST X-ray 1.99 0.35 0.42 Alpha-amylase, salivary
1nm9.1.A 27.59 monomer BLAST X-ray 2.10 0.35 0.42 Alpha-amylase, salivary3tto.1.A 18.40 monomer HHblits X-ray 3.30 0.29 0.44 Dextransucrase3ttq.1.A 18.40 monomer HHblits X-ray 1.90 0.29 0.44 Dextransucrase3k8k.1.A 32.58 monomer BLAST X-ray 2.20 0.35 0.37 Alpha-amylase, susG3k8l.1.A 32.02 monomer BLAST X-ray 2.30 0.35 0.37 Alpha-amylase, susG
3hje.1.A 21.88 monomer HHblits X-ray 1.90 0.31 0.33 704aa long hypotheticalglycosyltransferase
1iv8.1.A 22.93 monomer HHblits X-ray 1.90 0.32 0.33 MALTOOLIGOSYL TREHALOSESYNTHASE4flr.1.A 34.56 monomer BLAST X-ray 2.40 0.38 0.28 Amylosucrase4flq.1.A 34.56 monomer BLAST X-ray 2.50 0.38 0.28 Amylosucrase4lxf.1.A 40.15 homo-tetramer BLAST X-ray 2.60 0.40 0.28 Trehalose synthase
3zo9.1.A 37.88 homo-tetramer BLAST X-ray 1.84 0.40 0.28 TREHALOSE SYNTHASE/AMYLASETRES1mvy.1.A 34.62 monomer BLAST X-ray 2.00 0.38 0.27 amylosucrase1mw2.1.A 34.62 monomer BLAST X-ray 2.10 0.38 0.27 amylosucrase1jgi.1.A 34.62 monomer BLAST X-ray 2.00 0.38 0.27 amylosucrase4flo.1.A 34.62 monomer BLAST X-ray 2.20 0.38 0.27 Amylosucrase4fls.1.A 34.62 monomer BLAST X-ray 2.30 0.38 0.27 Amylosucrase
3ueq.1.A 34.62 monomer BLAST X-ray 1.85 0.38 0.27 Amylosucrase
3vu2.1.A 36.15 monomer BLAST X-ray 2.23 0.38 0.27 1,4-alpha-glucan-branching enzyme,chloroplastic/amyloplastic3aml.1.A 36.15 monomer BLAST X-ray 1.70 0.38 0.27 Os06g0726400 protein3amk.1.A 36.15 monomer BLAST X-ray 1.90 0.38 0.27 Os06g0726400 protein1uok.1.A 29.77 monomer BLAST X-ray 2.00 0.36 0.27 OLIGO-1,6-GLUCOSIDASE3aj7.1.A 38.10 monomer BLAST X-ray 1.30 0.39 0.26 Oligo-1,6-glucosidase3axh.1.A 38.10 monomer BLAST X-ray 1.80 0.39 0.26 Oligo-1,6-glucosidase IMA12zid.1.A 29.77 monomer BLAST X-ray 2.20 0.36 0.27 Dextran glucosidase3ttq.1.A 19.69 monomer HHblits X-ray 1.90 0.29 0.26 Dextransucrase3tto.1.A 19.69 monomer HHblits X-ray 3.30 0.29 0.26 Dextransucrase
1bpl.1.A 20.80 hetero-oligomer HHblits X-ray 2.20 0.30 0.26 ALPHA-1,4-GLUCAN-4-GLUCANOHYDROLASE1bf2.1.A 32.38 monomer BLAST X-ray 2.00 0.37 0.22 ISOAMYLASE1m7x.1.A 36.73 monomer BLAST X-ray 2.30 0.39 0.20 1,4-alpha-glucan Branching Enzyme
2yfn.1.A 19.42 homo-tetramer HHblits X-ray 1.45 0.29 0.21 ALPHA-GALACTOSIDASE-SUCROSEKINASE AGASK1xsj.1.A 23.16 homo-hexamer HHblits X-ray 2.10 0.32 0.20 Putative family 31 glucosidase yicI3mi6.1.A 17.89 homo-tetramer HHblits X-ray 2.70 0.29 0.20 Alpha-galactosidase
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13 de 28 28/11/2014 14:40
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
4fnr.1.A 16.84 homo-tetramer HHblits X-ray 3.20 0.28 0.20 Alpha-galactosidase AgaA4fnq.1.A 16.84 homo-tetramer HHblits X-ray 1.80 0.28 0.20 Alpha-galactosidase AgaB4fns.1.B 17.02 homo-tetramer HHblits X-ray 2.60 0.28 0.20 Alpha-galactosidase AgaA4fnp.1.A 17.02 homo-tetramer HHblits X-ray 2.80 0.28 0.20 Alpha-galactosidase AgaA4fnt.1.A 16.30 homo-tetramer HHblits X-ray 2.60 0.28 0.19 Alpha-galactosidase AgaA2xn0.1.A 22.09 homo-tetramer HHblits X-ray 2.50 0.31 0.18 ALPHA-GALACTOSIDASE1zy9.1.A 13.95 monomer HHblits X-ray 2.34 0.28 0.18 alpha-galactosidase
4b9y.1.A 10.47 homo-dimer HHblits X-ray 1.90 0.26 0.18 ALPHA-GLUCOSIDASE, PUTATIVE,ADG31B1ktc.1.A 16.05 homo-dimer HHblits X-ray 2.40 0.28 0.17 alpha-N-acetylgalactosaminidase2yl6.1.A 20.25 monomer HHblits X-ray 1.60 0.29 0.16 BETA-N-ACETYLHEXOSAMINIDASE3suu.1.A 17.95 monomer HHblits X-ray 1.60 0.30 0.16 Beta-hexosaminidase3h54.1.A 14.81 homo-dimer HHblits X-ray 2.20 0.27 0.17 Alpha-N-acetylgalactosaminidase4az7.1.A 20.51 monomer HHblits X-ray 1.70 0.30 0.16 BETA-N-ACETYLHEXOSAMINIDASE1m01.1.A 16.67 monomer HHblits X-ray 2.10 0.30 0.16 Beta-N-acetylhexosaminidase1m03.1.A 16.67 monomer HHblits X-ray 1.90 0.30 0.16 Beta-N-acetylhexosaminidase1m04.1.A 16.67 monomer HHblits X-ray 1.95 0.30 0.16 Beta-N-acetylhexosaminidase4c7g.1.A 15.38 monomer HHblits X-ray 1.80 0.29 0.16 BETA-N-ACETYLHEXOSAMINIDASE4c7d.1.A 15.38 monomer HHblits X-ray 1.85 0.29 0.16 BETA-N-ACETYLHEXOSAMINIDASE3orj.1.A 27.40 monomer HHblits X-ray 2.16 0.34 0.15 sugar-binding protein2yl9.1.A 18.67 monomer HHblits X-ray 2.65 0.31 0.16 BETA-N-ACETYLHEXOSAMINIDASE4azi.1.A 18.67 monomer HHblits X-ray 1.98 0.31 0.16 BETA-N-ACETYLHEXOSAMINIDASE2yla.1.A 18.67 monomer HHblits X-ray 2.70 0.31 0.16 BETA-N-ACETYLHEXOSAMINIDASE4azg.1.A 17.33 monomer HHblits X-ray 2.40 0.31 0.16 BETA-N-ACETYLHEXOSAMINIDASE4pys.1.A 15.38 monomer HHblits X-ray 1.82 0.28 0.16 beta-N-acetylhexosaminidase3lxa.1.A 9.88 homo-dimer HHblits X-ray 3.04 0.24 0.17 Alpha-galactosidase A3tv8.1.B 10.00 homo-dimer HHblits X-ray 2.64 0.24 0.17 Alpha-galactosidase A3hg3.1.A 10.00 homo-dimer HHblits X-ray 1.90 0.24 0.17 Alpha-galactosidase A3mqi.1.B 24.66 homo-dimer HHblits X-ray 2.30 0.31 0.15 Transcription factor COE13mqi.1.A 24.66 homo-dimer HHblits X-ray 2.30 0.31 0.15 Transcription factor COE14qaw.1.A 28.17 monomer HHblits X-ray 2.40 0.32 0.15 Xyn30D3mlp.1.A 25.00 homo-dimer HHblits X-ray 2.80 0.30 0.15 Transcription factor COE13mlp.1.B 25.00 homo-dimer HHblits X-ray 2.80 0.30 0.15 Transcription factor COE13mlp.2.A 25.00 homo-dimer HHblits X-ray 2.80 0.30 0.15 Transcription factor COE13mlp.2.B 25.00 homo-dimer HHblits X-ray 2.80 0.30 0.15 Transcription factor COE13n50.1.B 25.35 homo-dimer HHblits X-ray 3.10 0.31 0.15 Transcription factor COE33n50.1.A 25.35 homo-dimer HHblits X-ray 3.10 0.31 0.15 Transcription factor COE34nzj.1.A 12.16 monomer HHblits X-ray 1.57 0.27 0.15 Putative alpha-galactosidase3muj.1.A 24.29 homo-dimer HHblits X-ray 1.92 0.31 0.15 Transcription factor COE33muj.1.B 24.29 homo-dimer HHblits X-ray 1.92 0.31 0.15 Transcription factor COE33kya.1.A 34.85 homo-dimer HHblits X-ray 1.77 0.35 0.14 Putative phosphatase1uad.1.B 26.09 hetero-oligomer HHblits X-ray 2.10 0.31 0.14 Exocyst complex component Sec53hrp.1.A 23.88 monomer HHblits X-ray 1.70 0.33 0.14 Uncharacterized protein1t0o.1.A 9.46 monomer HHblits X-ray 1.96 0.25 0.15 alpha-galactosidase
2cxk.1.A 18.57 homo-dimer HHblits X-ray 1.85 0.29 0.15 calmodulin binding transcription activator1
1hk6.1.A 26.87 monomer HHblits NMR NA 0.31 0.14 EXOCYST COMPLEX COMPONENTSEC5
4hw6.1.A 21.21 monomer HHblits X-ray 1.70 0.32 0.14 hypothetical protein, IPT/TIG domainprotein3tc9.1.A 24.62 homo-dimer HHblits X-ray 2.23 0.33 0.14 Hypothetical hydrolase3orj.1.A 23.81 monomer HHblits X-ray 2.16 0.32 0.13 sugar-binding protein3k8k.1.A 55.10 monomer BLAST X-ray 2.20 0.46 0.10 Alpha-amylase, susG3k8l.1.A 55.10 monomer BLAST X-ray 2.30 0.46 0.10 Alpha-amylase, susG3pdd.1.A 23.73 monomer HHblits X-ray 1.72 0.31 0.12 Glycoside hydrolase, family 9
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14 de 28 28/11/2014 14:40
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
2yn5.1.A 15.00 homo-tetramer HHblits X-ray 1.85 0.29 0.13 PUTATIVE INNER MEMBRANEPROTEIN
2yn3.1.B 15.00 homo-dimer HHblits X-ray 2.12 0.29 0.13 PUTATIVE INNER MEMBRANEPROTEIN
2yn3.1.A 15.00 homo-dimer HHblits X-ray 2.12 0.29 0.13 PUTATIVE INNER MEMBRANEPROTEIN
2yn3.2.A 15.00 monomer HHblits X-ray 2.12 0.29 0.13 PUTATIVE INNER MEMBRANEPROTEIN4kdv.1.A 12.28 monomer HHblits X-ray 2.42 0.29 0.12 Antifreeze protein
3wnl.1.A 17.54 monomer HHblits X-ray 2.60 0.29 0.12 Cycloisomaltooligosaccharideglucanotransferase
3cc1.1.A 14.55 homo-tetramer HHblits X-ray 2.00 0.30 0.11 Putative alpha-N-acetylgalactosaminidase
3cc1.1.B 14.55 homo-tetramer HHblits X-ray 2.00 0.30 0.11 Putative alpha-N-acetylgalactosaminidase3hg5.1.A 16.07 homo-dimer HHblits X-ray 2.30 0.27 0.12 Alpha-galactosidase A3s5z.1.B 16.07 homo-dimer HHblits X-ray 2.00 0.27 0.12 Alpha-galactosidase A3pdg.1.A 22.64 monomer HHblits X-ray 1.78 0.31 0.11 Fibronectin(III)-like module3aib.1.A 30.61 monomer HHblits X-ray 3.09 0.36 0.10 Glucosyltransferase-SI4amc.1.A 24.49 monomer HHblits X-ray 3.60 0.33 0.10 GLUCANSUCRASE3hz3.1.A 22.92 monomer HHblits X-ray 2.22 0.32 0.10 Glucansucrase4ayg.1.A 22.92 monomer HHblits X-ray 2.00 0.32 0.10 GLUCANSUCRASE3kll.1.A 22.92 monomer HHblits X-ray 2.00 0.32 0.10 Glucansucrase
3pdd.1.A 14.00 monomer HHblits X-ray 1.72 0.26 0.10 Glycoside hydrolase, family 91uas.1.A 10.20 monomer HHblits X-ray 1.50 0.27 0.10 alpha-galactosidase4q6t.1.A 13.33 monomer HHblits X-ray 1.40 0.28 0.09 Glycosyl hydrolase, family 183bxw.1.A 6.52 homo-dimer HHblits X-ray 2.70 0.25 0.10 Chitinase domain-containing protein 13co4.1.A 13.04 monomer HHblits X-ray 1.92 0.24 0.10 Chitinase3fnd.1.A 13.04 monomer HHblits X-ray 1.90 0.24 0.10 Chitinase4q6j.1.A 25.00 homo-tetramer HHblits X-ray 1.37 0.31 0.08 Lmo0131 protein3a24.1.A 10.26 monomer HHblits X-ray 2.30 0.28 0.08 alpha-galactosidase1we5.1.A 25.00 homo-hexamer HHblits X-ray 2.40 0.34 0.08 Putative family 31 glucosidase yicI2f2h.1.A 25.00 homo-hexamer HHblits X-ray 1.95 0.34 0.08 Putative family 31 glucosidase yicI1we5.1.B 25.00 homo-hexamer HHblits X-ray 2.40 0.34 0.08 Putative family 31 glucosidase yicI3pjt.1.B 12.82 homo-dimer HHblits X-ray 2.52 0.27 0.08 Cyclic dimeric GMP binding protein3pjt.1.A 12.82 homo-dimer HHblits X-ray 2.52 0.27 0.08 Cyclic dimeric GMP binding protein3pju.1.A 12.82 homo-dimer HHblits X-ray 2.50 0.27 0.08 Cyclic dimeric GMP binding protein3jx9.1.A 17.07 homo-dimer HHblits X-ray 1.95 0.23 0.09 Putative phosphoheptose isomerase3pfm.1.A 13.16 homo-dimer HHblits X-ray 2.91 0.27 0.08 GGDEF domain protein3ecq.2.A 19.44 monomer HHblits X-ray 2.90 0.31 0.08 Endo-alpha-N-acetylgalactosaminidase3ecq.1.A 19.44 monomer HHblits X-ray 2.90 0.31 0.08 Endo-alpha-N-acetylgalactosaminidase2gjx.1.A 31.25 hetero-oligomer HHblits X-ray 2.80 0.40 0.07 Beta-hexosaminidase alpha chain2gk1.1.B 31.25 hetero-oligomer HHblits X-ray 3.25 0.39 0.07 Beta-hexosaminidase beta chain1o7a.1.A 31.25 homo-dimer HHblits X-ray 2.25 0.39 0.07 BETA-HEXOSAMINIDASE BETA CHAIN2gjx.1.B 31.25 hetero-oligomer HHblits X-ray 2.80 0.39 0.07 Beta-hexosaminidase beta chain3lmy.1.A 31.25 homo-dimer HHblits X-ray 2.80 0.39 0.07 Beta-hexosaminidase subunit beta2zxq.1.A 13.89 monomer HHblits X-ray 2.00 0.29 0.08 Endo-alpha-N-acetylgalactosaminidase3rpm.1.A 29.41 monomer HHblits X-ray 2.10 0.33 0.07 Beta-N-acetyl-hexosaminidase
4dm2.1.A 23.53 monomer HHblits X-ray 1.95 0.32 0.07 458aa long hypothetical endo-1,4-beta-glucanase2aam.1.A 14.29 monomer HHblits X-ray 2.20 0.30 0.07 Hypothetical protein TM14102yl8.1.A 30.30 monomer HHblits X-ray 1.75 0.34 0.07 BETA-N-ACETYLHEXOSAMINIDASE
3wnk.1.A 27.27 monomer HHblits X-ray 2.30 0.33 0.07 Cycloisomaltooligosaccharideglucanotransferase
3axx.1.A 24.24 monomer HHblits X-ray 1.90 0.33 0.07 458aa long hypothetical endo-1,4-beta-glucanase4azb.1.A 30.30 homo-dimer HHblits X-ray 2.10 0.33 0.07 BETA-N-ACETYLHEXOSAMINIDASE
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
4qgr.1.A 24.24 homo-dimer HHblits X-ray 1.75 0.33 0.07 DegT/DnrJ/EryC1/StrS aminotransferase
1kyh.1.A 20.00 monomer HHblits X-ray 1.60 0.28 0.07 Hypothetical 29.9 kDa protein inSIGY-CYDD intergenic region4h04.1.A 31.25 monomer HHblits X-ray 1.80 0.35 0.07 Lacto-N-biosidase3rcn.1.A 31.25 homo-dimer HHblits X-ray 2.51 0.35 0.07 Beta-N-acetylhexosaminidase4az6.1.A 31.25 monomer HHblits X-ray 1.36 0.34 0.07 BETA-N-ACETYLHEXOSAMINIDASE2yll.1.A 31.25 monomer HHblits X-ray 1.85 0.34 0.07 BETA-N-ACETYLHEXOSAMINIDASE
3qho.1.A 25.00 monomer HHblits X-ray 1.65 0.34 0.07 458aa long hypothetical endo-1,4-beta-glucanase
2zun.1.A 25.00 monomer HHblits X-ray 2.00 0.34 0.07 458aa long hypothetical endo-1,4-beta-glucanase1yht.1.A 29.03 monomer HHblits X-ray 2.00 0.36 0.06 DspB1c7s.1.A 29.03 homo-dimer HHblits X-ray 1.80 0.36 0.06 BETA-N-ACETYLHEXOSAMINIDASE1qba.1.A 29.03 monomer HHblits X-ray 1.85 0.36 0.06 CHITOBIASE1c7t.1.A 29.03 homo-dimer HHblits X-ray 1.90 0.36 0.06 BETA-N-ACETYLHEXOSAMINIDASE1qz9.1.A 31.25 homo-dimer HHblits X-ray 1.85 0.33 0.07 KYNURENINASE4kmq.1.A 21.21 monomer HHblits X-ray 1.90 0.31 0.07 Lmo2446 protein1i29.1.A 29.03 homo-dimer HHblits X-ray 2.80 0.36 0.06 CSDB1jf9.1.A 29.03 homo-dimer HHblits X-ray 2.00 0.36 0.06 SELENOCYSTEINE LYASE2ckr.1.A 41.38 monomer HHblits X-ray 1.77 0.41 0.06 ENDOGLUCANASE E-5
2g3m.1.A 25.00 homo-hexamer HHblits X-ray 2.55 0.33 0.07 Alpha-glucosidase2fds.1.A 15.63 homo-dimer HHblits X-ray 1.72 0.33 0.07 orotidine-monophosphate-decarboxylase2yl5.1.A 25.81 monomer HHblits X-ray 2.15 0.35 0.06 BETA-N-ACETYLHEXOSAMINIDASE4azc.1.A 25.81 monomer HHblits X-ray 2.09 0.35 0.06 BETA-N-ACETYLHEXOSAMINIDASE3ost.1.A 8.82 monomer HHblits X-ray 1.69 0.27 0.07 serine/threonine-protein kinase KCC43osm.1.A 8.82 monomer HHblits X-ray 1.70 0.27 0.07 serine/threonine-protein kinase KCC4
3qhm.1.A 25.81 monomer HHblits X-ray 2.01 0.34 0.06 458aa long hypothetical endo-1,4-beta-glucanase
4dm1.1.A 25.81 monomer HHblits X-ray 1.75 0.34 0.06 458aa long hypothetical endo-1,4-beta-glucanase
3qhm.2.A 25.81 monomer HHblits X-ray 2.01 0.34 0.06 458aa long hypothetical endo-1,4-beta-glucanase3nuk.1.A 25.00 homo-dimer HHblits X-ray 2.06 0.32 0.07 ALPHA-GLUCOSIDASE3m46.1.A 25.00 homo-dimer HHblits X-ray 2.66 0.32 0.07 Uncharacterized protein3n04.1.A 25.00 homo-dimer HHblits X-ray 2.02 0.32 0.07 alpha-glucosidase3pha.1.A 25.00 homo-dimer HHblits X-ray 2.17 0.32 0.07 alpha-glucosidase3nsx.1.A 25.00 homo-dimer HHblits X-ray 1.57 0.32 0.07 alpha-glucosidase1hjs.1.A 35.48 monomer HHblits X-ray 1.87 0.34 0.06 BETA-1,4-GALACTANASE1fob.1.A 25.00 monomer HHblits X-ray 1.80 0.31 0.07 BETA-1,4-GALACTANASE1hjq.1.A 32.26 monomer HHblits X-ray 2.55 0.33 0.06 BETA-1,4-GALACTANASE
3wmb.1.A 26.67 monomer HHblits X-ray 2.70 0.36 0.06 Beta-hexosaminidase3ozo.1.A 26.67 homo-dimer HHblits X-ray 2.00 0.36 0.06 N-acetylglucosaminidase3vtr.1.A 26.67 monomer HHblits X-ray 2.50 0.36 0.06 N-acetylglucosaminidase3s6t.1.A 26.67 homo-dimer HHblits X-ray 2.30 0.36 0.06 N-acetylglucosaminidase2w8u.1.A 22.58 homo-dimer HHblits X-ray 1.50 0.33 0.06 SERINE PALMITOYLTRANSFERASE2xbn.1.A 22.58 homo-dimer HHblits X-ray 1.40 0.33 0.06 SERINE PALMITOYLTRANSFERASE1bqg.1.A 18.75 homo-tetramer HHblits X-ray 2.30 0.30 0.07 D-GLUCARATE DEHYDRATASE3w37.1.A 29.03 monomer HHblits X-ray 1.70 0.33 0.06 Alpha-glucosidase
3qhn.1.A 26.67 monomer HHblits X-ray 1.99 0.35 0.06 458aa long hypothetical endo-1,4-beta-glucanase3poc.1.A 21.88 homo-dimer HHblits X-ray 1.99 0.30 0.07 alpha-Glucosidase3m6d.1.A 21.88 homo-dimer HHblits X-ray 2.90 0.30 0.07 Uncharacterized protein1ece.1.A 22.58 monomer HHblits X-ray 2.40 0.32 0.06 ENDOCELLULASE E13nys.1.A 33.33 homo-dimer HHblits X-ray 1.45 0.35 0.06 Aminotransferase WbpE4lgl.1.A 22.58 homo-dimer HHblits X-ray 2.00 0.32 0.06 Glycine dehydrogenase [decarboxylating]4lhc.1.A 22.58 homo-dimer HHblits X-ray 1.90 0.32 0.06 Glycine dehydrogenase [decarboxylating]
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
3r89.1.A 12.50 homo-dimer HHblits X-ray 1.84 0.29 0.07 Orotidine 5'-phosphate decarboxylase1c0n.1.A 31.03 homo-dimer HHblits X-ray 2.80 0.37 0.06 PROTEIN (CSDB PROTEIN)3nub.1.A 33.33 homo-dimer HHblits X-ray 1.90 0.34 0.06 Aminotransferase WbpE3nu8.1.B 33.33 homo-dimer HHblits X-ray 1.50 0.34 0.06 Aminotransferase WbpE3cai.1.A 20.00 homo-dimer HHblits X-ray 1.80 0.34 0.06 POSSIBLE AMINOTRANSFERASE
4bf7.1.A 25.81 monomer HHblits X-ray 2.00 0.31 0.06 ARABINOGALACTAN ENDO-1,4-BETA-GALACTOSIDASE A1ax4.1.A 31.03 homo-tetramer HHblits X-ray 2.10 0.36 0.06 TRYPTOPHANASE3vp6.1.B 16.13 homo-dimer HHblits X-ray 2.10 0.31 0.06 Glutamate decarboxylase 13vp6.1.A 16.13 homo-dimer HHblits X-ray 2.10 0.31 0.06 Glutamate decarboxylase 12okj.1.A 16.13 homo-dimer HHblits X-ray 2.30 0.31 0.06 Glutamate decarboxylase 1
2c81.1.A 27.59 homo-dimer HHblits X-ray 1.70 0.36 0.06 GLUTAMINE-2-DEOXY-SCYLLO-INOSOSE AMINOTRANSFERASE2jgt.1.A 23.33 homo-dimer HHblits X-ray 3.00 0.33 0.06 SERINE PALMITOYLTRANSFERASE2jg2.1.A 23.33 homo-dimer HHblits X-ray 1.30 0.33 0.06 SERINE PALMITOYLTRANSFERASE2w8t.1.A 23.33 homo-dimer HHblits X-ray 1.25 0.33 0.06 SERINE PALMITOYLTRANSFERASE
2dr1.1.A 18.75 homo-dimer HHblits X-ray 1.90 0.28 0.07 386aa long hypothetical serineaminotransferase2x2h.1.A 12.50 monomer HHblits X-ray 2.06 0.28 0.07 ALPHA-1,4-GLUCAN LYASE ISOZYME 1
1vrx.1.A 23.33 monomer HHblits X-ray 2.40 0.32 0.06 ENDOCELLULASE E1 FROM A.CELLULOLYTICUS4ot8.2.A 31.03 homo-dimer HHblits X-ray 2.00 0.35 0.06 Serine hydroxymethyltransferase4mso.1.B 31.03 homo-dimer HHblits X-ray 1.40 0.35 0.06 Serine hydroxymethyltransferase4mso.1.A 31.03 homo-dimer HHblits X-ray 1.40 0.35 0.06 Serine hydroxymethyltransferase4n0w.1.A 31.03 homo-dimer HHblits X-ray 1.65 0.35 0.06 Serine hydroxymethyltransferase3n0l.1.A 19.35 homo-dimer HHblits X-ray 1.80 0.30 0.06 Serine hydroxymethyltransferase3ctt.1.A 19.35 monomer HHblits X-ray 2.10 0.30 0.06 Maltase-glucoamylase3l4x.1.A 19.35 monomer HHblits X-ray 1.90 0.30 0.06 Maltase-glucoamylase, intestinal3pgy.1.A 20.00 homo-dimer HHblits X-ray 1.92 0.32 0.06 Serine hydroxymethyltransferase3pgy.1.B 20.00 homo-dimer HHblits X-ray 1.92 0.32 0.06 Serine hydroxymethyltransferase2yhk.1.A 23.33 homo-tetramer HHblits X-ray 1.91 0.32 0.06 TYROSINE PHENOL-LYASE1ibj.1.A 27.59 homo-tetramer HHblits X-ray 2.30 0.34 0.06 CYSTATHIONINE BETA-LYASE3top.1.A 19.35 monomer HHblits X-ray 2.88 0.29 0.06 Maltase-glucoamylase, intestinal4f5k.1.A 30.00 homo-dimer HHblits X-ray 2.20 0.32 0.06 Aspartate aminotransferase4k2b.1.B 31.03 homo-dimer HHblits X-ray 2.31 0.34 0.06 NTD biosynthesis operon protein NtdA4k2b.1.A 31.03 homo-dimer HHblits X-ray 2.31 0.34 0.06 NTD biosynthesis operon protein NtdA4k2i.1.B 31.03 homo-dimer HHblits X-ray 2.23 0.34 0.06 NTD biosynthesis operon protein NtdA4k2i.1.A 31.03 homo-dimer HHblits X-ray 2.23 0.34 0.06 NTD biosynthesis operon protein NtdA
1fc4.1.A 16.13 homo-dimer HHblits X-ray 2.00 0.29 0.06 2-AMINO-3-KETOBUTYRATECONENZYME A LIGASE3f9t.1.A 23.33 homo-dimer HHblits X-ray 2.11 0.32 0.06 L-tyrosine decarboxylase MfnA
1yjz.1.A 20.00 homo-dimer HHblits X-ray 2.10 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE
1yjs.1.A 20.00 homo-dimer HHblits X-ray 2.00 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE
3tqx.1.A 20.00 homo-dimer HHblits X-ray 2.30 0.31 0.06 2-amino-3-ketobutyrate coenzyme Aligase2x8u.1.A 20.69 homo-dimer HHblits X-ray 2.10 0.34 0.06 SERINE PALMITOYLTRANSFERASE4f5h.1.A 34.48 homo-dimer HHblits X-ray 1.60 0.34 0.06 Aspartate aminotransferase4f5f.1.A 34.48 homo-dimer HHblits X-ray 2.25 0.34 0.06 Aspartate aminotransferase
2jis.1.A 16.67 homo-dimer HHblits X-ray 1.60 0.31 0.06 CYSTEINE SULFINIC ACIDDECARBOXYLASE2epk.1.A 20.00 homo-dimer HHblits X-ray 1.85 0.31 0.06 N-acetyl-beta-D-glucosaminidase2epo.1.A 20.00 homo-dimer HHblits X-ray 1.56 0.31 0.06 N-acetyl-beta-D-glucosaminidase4a00.1.A 31.03 homo-dimer HHblits X-ray 2.34 0.34 0.06 ASPARTATE AMINOTRANSFERASE3gbx.1.A 16.67 homo-dimer HHblits X-ray 1.80 0.31 0.06 Serine hydroxymethyltransferase
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
3gbx.1.B 16.67 homo-dimer HHblits X-ray 1.80 0.31 0.06 Serine hydroxymethyltransferase3g8m.1.A 16.67 homo-dimer HHblits X-ray 3.30 0.31 0.06 Serine hydroxymethyltransferase1g0c.1.A 23.33 monomer HHblits X-ray 1.90 0.31 0.06 ENDOGLUCANASE4lw4.1.A 32.14 hetero-oligomer HHblits X-ray 2.01 0.36 0.06 Cysteine sulfinate desulfinase4lw4.1.B 32.14 hetero-oligomer HHblits X-ray 2.01 0.36 0.06 Cysteine sulfinate desulfinase4lw2.1.A 32.14 homo-dimer HHblits X-ray 1.80 0.36 0.06 Cysteine sulfinate desulfinase3lpo.1.A 12.90 monomer HHblits X-ray 3.20 0.28 0.06 Sucrase-isomaltase2ctz.1.A 27.59 homo-dimer HHblits X-ray 2.60 0.33 0.06 O-acetyl-L-homoserine sulfhydrylase4f5m.1.A 31.03 homo-dimer HHblits X-ray 1.65 0.33 0.06 Aspartate aminotransferase4q75.1.A 24.14 homo-dimer HHblits X-ray 1.71 0.33 0.06 Cysteine desulfurase 2, chloroplastic4q76.1.A 24.14 homo-dimer HHblits X-ray 1.90 0.33 0.06 Cysteine desulfurase 2, chloroplastic
1wyt.1.A 32.14 hetero-oligomer HHblits X-ray 2.40 0.36 0.06 glycine dehydrogenase (decarboxylating)subunit 1
1wyv.1.A 32.14 hetero-oligomer HHblits X-ray 2.40 0.36 0.06 glycine dehydrogenase (decarboxylating)subunit 12oge.1.A 24.14 homo-dimer HHblits X-ray 2.05 0.33 0.06 Transaminase3ecd.1.A 27.59 homo-dimer HHblits X-ray 1.60 0.33 0.06 Serine hydroxymethyltransferase 21t3i.1.A 25.00 homo-dimer HHblits X-ray 1.80 0.35 0.06 Probable cysteine desulfurase2xvg.1.A 15.63 monomer HHblits X-ray 2.60 0.25 0.07 ALPHA XYLOSIDASE3h7f.1.A 24.14 homo-dimer HHblits X-ray 1.50 0.33 0.06 Serine hydroxymethyltransferase 1
3ke3.1.A 24.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 Putative serine-pyruvateaminotransferase3nyu.1.A 35.71 homo-dimer HHblits X-ray 1.50 0.35 0.06 Aminotransferase WbpE4f5g.1.A 31.03 homo-dimer HHblits X-ray 1.67 0.32 0.06 Aspartate aminotransferase3ndn.1.A 32.14 homo-tetramer HHblits X-ray 1.85 0.35 0.06 O-succinylhomoserine sulfhydrylase
2ch1.1.A 16.67 homo-dimer HHblits X-ray 2.40 0.30 0.06 3-HYDROXYKYNURENINETRANSAMINASE3e9k.1.A 27.59 homo-dimer HHblits X-ray 1.70 0.32 0.06 Kynureninase
2via.1.A 20.69 homo-dimer HHblits X-ray 1.67 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE1kkj.1.A 20.69 homo-dimer HHblits X-ray 1.93 0.32 0.06 Serine Hydroxymethyltransferase
2vmn.1.A 20.69 homo-dimer HHblits X-ray 1.74 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE
2w7k.1.A 20.69 homo-dimer HHblits X-ray 2.42 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE
2vms.1.A 20.69 homo-dimer HHblits X-ray 2.15 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE
2vgv.1.A 20.69 homo-dimer HHblits X-ray 2.30 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE
2vmz.1.A 20.69 homo-dimer HHblits X-ray 1.70 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE
2w7h.1.A 20.69 homo-dimer HHblits X-ray 1.67 0.32 0.06 SERINEHYDROXYMETHYLTRANSFERASE3frk.1.A 24.14 homo-dimer HHblits X-ray 2.15 0.32 0.06 QdtB
3aeo.1.A 17.24 homo-tetramer HHblits X-ray 2.15 0.32 0.06 Methionine gamma-lyase2dkj.1.A 20.69 homo-dimer HHblits X-ray 1.15 0.32 0.06 serine hydroxymethyltransferase3u7v.1.A 17.24 homo-tetramer HHblits X-ray 1.80 0.32 0.06 Beta-galactosidase3dr4.1.A 25.00 homo-dimer HHblits X-ray 1.60 0.34 0.06 Putative perosamine synthetase3dr7.1.A 25.00 homo-dimer HHblits X-ray 1.70 0.34 0.06 Putative perosamine synthetase
4bhd.1.B 23.33 homo-dimer HHblits X-ray 2.83 0.29 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4bhd.1.A 23.33 homo-dimer HHblits X-ray 2.83 0.29 0.06 SERINEHYDROXYMETHYLTRANSFERASE
1dfo.1.A 17.24 homo-dimer HHblits X-ray 2.40 0.31 0.06 SERINEHYDROXYMETHYLTRANSFERASE
1eqb.1.A 17.24 homo-dimer HHblits X-ray 2.70 0.31 0.06 SERINEHYDROXYMETHYLTRANSFERASE
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
1b9i.1.A 20.69 homo-dimer HHblits X-ray 2.00 0.31 0.06PROTEIN (3-AMINO-
5-HYDROXYBENZOIC ACIDSYNTHASE)
1eji.1.D 24.14 homo-tetramer HHblits X-ray 2.90 0.31 0.06 SERINEHYDROXYMETHYLTRANSFERASE
1eji.1.C 24.14 homo-tetramer HHblits X-ray 2.90 0.31 0.06 SERINEHYDROXYMETHYLTRANSFERASE
1eji.1.B 24.14 homo-tetramer HHblits X-ray 2.90 0.31 0.06 SERINEHYDROXYMETHYLTRANSFERASE
1eji.1.A 24.14 homo-tetramer HHblits X-ray 2.90 0.31 0.06 SERINEHYDROXYMETHYLTRANSFERASE
1rv4.1.A 24.14 homo-tetramer HHblits X-ray 2.95 0.31 0.06 Serine hydroxymethyltransferase,cytosolic1ls3.1.B 24.14 homo-tetramer HHblits X-ray 2.70 0.31 0.06 Serine Hydroxymethyltransferase
1rvy.1.A 24.14 homo-tetramer HHblits X-ray 2.90 0.31 0.06 Serine hydroxymethyltransferase,cytosolic1ls3.1.A 24.14 homo-tetramer HHblits X-ray 2.70 0.31 0.06 Serine Hydroxymethyltransferase
1cj0.1.A 24.14 homo-dimer HHblits X-ray 2.80 0.31 0.06 PROTEIN (SERINEHYDROXYMETHYLTRANSFERASE)4riz.1.A 16.67 homo-dimer HHblits X-ray 2.20 0.28 0.06 Pyridoxal-dependent decarboxylase3r9a.1.A 13.33 hetero-oligomer HHblits X-ray 2.35 0.28 0.06 Serine--pyruvate aminotransferase
4cbr.1.A 13.33 homo-dimer HHblits X-ray 2.30 0.28 0.06 SERINE--PYRUVATEAMINOTRANSFERASE4kyo.1.A 13.33 hetero-oligomer HHblits X-ray 2.20 0.28 0.06 Serine-pyruvate aminotransferase
2yob.1.A 13.33 homo-dimer HHblits X-ray 1.90 0.28 0.06 SERINE--PYRUVATEAMINOTRANSFERASE3bn1.1.A 25.00 homo-dimer HHblits X-ray 1.80 0.34 0.06 Perosamine synthetase
4obu.1.A 12.90 homo-dimer HHblits X-ray 2.80 0.26 0.06 Pyridoxal-dependent decarboxylasedomain protein
4obv.1.A 12.90 homo-dimer HHblits X-ray 2.84 0.26 0.06 Pyridoxal-dependent decarboxylasedomain protein
4dq6.1.A 20.69 homo-dimer HHblits X-ray 1.50 0.31 0.06 Putative pyridoxal phosphate-dependenttransferase3kgw.1.B 10.00 homo-dimer HHblits X-ray 1.65 0.28 0.06 Alanine-glyoxylate aminotransferase3kgx.1.A 10.00 homo-dimer HHblits X-ray 1.80 0.28 0.06 Alanine-glyoxylate aminotransferase1vjo.1.A 10.00 homo-dimer HHblits X-ray 1.70 0.28 0.06 alanine--glyoxylate aminotransferase4j5u.1.A 16.67 homo-dimer HHblits X-ray 1.70 0.28 0.06 Serine hydroxymethyltransferase
3lws.1.A 21.43 homo-dimer HHblits X-ray 2.00 0.33 0.06 Aromatic amino acid beta-eliminatinglyase/threonine aldolase1arh.1.A 32.14 homo-dimer HHblits X-ray 2.30 0.33 0.06 ASPARTATE AMINOTRANSFERASE1arh.1.B 32.14 homo-dimer HHblits X-ray 2.30 0.33 0.06 ASPARTATE AMINOTRANSFERASE3ayr.1.A 25.00 monomer HHblits X-ray 2.00 0.33 0.06 Endoglucanase
1bj4.1.A 20.69 monomer HHblits X-ray 2.65 0.31 0.06 PROTEIN (SERINEHYDROXYMETHYLTRANSFERASE)
4d1i.1.A 17.24 monomer HHblits X-ray 1.80 0.31 0.06 BETA-GALACTOSIDASE, PUTATIVE,BGL35A3rbf.1.B 9.68 homo-dimer HHblits X-ray 2.90 0.25 0.06 Aromatic-L-amino-acid decarboxylase3rbf.1.A 9.68 homo-dimer HHblits X-ray 2.90 0.25 0.06 Aromatic-L-amino-acid decarboxylase
1g7w.1.A 32.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 ASPARTATE AMINOTRANSFERASE1ix8.1.A 32.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 Aspartate Aminotransferase1b4x.1.A 32.14 homo-dimer HHblits X-ray 2.45 0.33 0.06 ASPARTATE AMINOTRANSFERASE1bqa.1.A 32.14 homo-dimer HHblits X-ray 2.10 0.33 0.06 ASPARTATE AMINOTRANSFERASE1qit.1.A 32.14 homo-dimer HHblits X-ray 1.90 0.33 0.06 ASPARTATE AMINOTRANSFERASE
1ahe.1.A 32.14 homo-dimer HHblits X-ray 2.30 0.33 0.06 ASPARTATE AMINOTRANSFERASE1toj.1.A 32.14 homo-dimer HHblits X-ray 1.90 0.33 0.06 Aspartate aminotransferase
5eaa.1.A 32.14 homo-dimer HHblits X-ray 2.40 0.33 0.06 ASPARTATE AMINOTRANSFERASE1ix6.1.A 32.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 Aspartate Aminotransferase1ix7.1.A 32.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 Aspartate Aminotransferase
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
1toe.1.A 32.14 homo-dimer HHblits X-ray 2.00 0.33 0.06 Aspartate aminotransferase1aam.1.A 32.14 homo-dimer HHblits X-ray 2.80 0.33 0.06 ASPARTATE AMINOTRANSFERASE2d5y.1.A 32.14 homo-dimer HHblits X-ray 1.98 0.33 0.06 Aspartate aminotransferase1qis.1.A 32.14 homo-dimer HHblits X-ray 1.90 0.33 0.06 ASPARTATE AMINOTRANSFERASE1arg.1.A 32.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 ASPARTATE AMINOTRANSFERASE1ase.1.A 32.14 homo-dimer HHblits X-ray 2.50 0.33 0.06 ASPARTATE AMINOTRANSFERASE1ams.1.A 32.14 homo-dimer HHblits X-ray 2.70 0.33 0.06 ASPARTATE AMINOTRANSFERASE1aaw.1.A 32.14 homo-dimer HHblits X-ray 2.40 0.33 0.06 ASPARTATE AMINOTRANSFERASE1art.1.A 32.14 homo-dimer HHblits X-ray 1.80 0.33 0.06 ASPARTATE AMINOTRANSFERASE1asn.1.A 32.14 homo-dimer HHblits X-ray 2.50 0.33 0.06 ASPARTATE AMINOTRANSFERASE1asn.1.B 32.14 homo-dimer HHblits X-ray 2.50 0.33 0.06 ASPARTATE AMINOTRANSFERASE1cq6.1.A 32.14 homo-dimer HHblits X-ray 2.70 0.33 0.06 ASPARTATE AMINOTRANSFERASE2q7w.1.A 32.14 homo-dimer HHblits X-ray 1.40 0.33 0.06 Aspartate aminotransferase1g7x.1.A 32.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 ASPARTATE AMINOTRANSFERASE1yoo.1.A 32.14 homo-dimer HHblits X-ray 2.40 0.33 0.06 ASPARTATE AMINOTRANSFERASE1bqd.1.A 32.14 homo-dimer HHblits X-ray 2.10 0.33 0.06 ASPARTATE AMINOTRANSFERASE
1czc.1.A 32.14 homo-dimer HHblits X-ray 2.50 0.33 0.06 PROTEIN (ASPARTATEAMINOTRANSFERASE)1qir.1.A 32.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 ASPARTATE AMINOTRANSFERASE3aat.1.A 32.14 homo-dimer HHblits X-ray 2.80 0.33 0.06 ASPARTATE AMINOTRANSFERASE1ari.1.A 32.14 homo-dimer HHblits X-ray 2.30 0.33 0.06 ASPARTATE AMINOTRANSFERASE1tog.1.B 32.14 homo-dimer HHblits X-ray 2.31 0.33 0.06 Aspartate aminotransferase1tog.1.A 32.14 homo-dimer HHblits X-ray 2.31 0.33 0.06 Aspartate aminotransferase2d7y.1.A 32.14 homo-dimer HHblits X-ray 2.66 0.33 0.06 Aspartate aminotransferase3a2b.1.A 20.69 homo-dimer HHblits X-ray 2.30 0.30 0.06 Serine palmitoyltransferase1i43.1.A 27.59 homo-tetramer HHblits X-ray 3.10 0.30 0.06 CYSTATHIONINE GAMMA-SYNTHASE
3ri6.1.A 29.63 homo-tetramer HHblits X-ray 2.20 0.36 0.06 O-ACETYLHOMOSERINESULFHYDRYLASE
2qma.1.A 20.69 homo-dimer HHblits X-ray 1.81 0.30 0.06 Diaminobutyrate-pyruvate transaminaseand L-2,4-diaminobutyrate decarboxylase2bwn.1.B 20.69 homo-dimer HHblits X-ray 2.10 0.30 0.06 5-AMINOLEVULINATE SYNTHASE2bwo.1.A 20.69 homo-dimer HHblits X-ray 2.80 0.30 0.06 5-AMINOLEVULINATE SYNTHASE2hui.1.A 17.24 homo-dimer HHblits X-ray 1.75 0.30 0.06 Alanine glyoxylate aminotransferase4f5i.1.A 32.14 homo-dimer HHblits X-ray 2.20 0.33 0.06 Aspartate aminotransferase4f5l.1.A 32.14 homo-dimer HHblits X-ray 1.40 0.33 0.06 Aspartate aminotransferase
4q31.1.A 25.00 homo-tetramer HHblits X-ray 2.10 0.33 0.06 cystathione gamma lyase CalE63n11.1.A 25.00 monomer HHblits X-ray 1.35 0.33 0.06 Chitinase A1e5j.1.A 32.14 monomer HHblits X-ray 1.85 0.33 0.06 ENDOGLUCANASE 5A
1cs1.1.A 13.33 homo-tetramer HHblits X-ray 1.50 0.27 0.06 PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE)1js6.1.A 13.33 homo-dimer HHblits X-ray 2.60 0.27 0.06 DOPA decarboxylase
4uqv.6.B 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.6.A 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.5.B 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.5.A 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.1.A 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.4.B 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.4.A 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.3.B 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
4uqv.1.B 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE2po3.1.A 20.69 homo-dimer HHblits X-ray 2.10 0.30 0.06 4-dehydrase
4uqv.3.A 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.2.B 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
4uqv.2.A 24.14 homo-dimer HHblits X-ray 3.00 0.30 0.06 SERINEHYDROXYMETHYLTRANSFERASE
3nnk.1.A 9.68 homo-tetramer HHblits X-ray 2.58 0.24 0.06 Ureidoglycine-glyoxylateaminotransferase3lvl.1.A 21.43 hetero-oligomer HHblits X-ray 3.00 0.32 0.06 Cysteine desulfurase
1o62.1.A 21.43 homo-dimer HHblits X-ray 2.10 0.32 0.06 aminotransferase1o69.1.A 21.43 homo-dimer HHblits X-ray 1.84 0.32 0.06 aminotransferase
2r0t.1.A 13.79 homo-dimer HHblits X-ray 1.90 0.29 0.06 Pyridoxamine 5-phosphate-dependentdehydrase3gr9.1.A 13.79 homo-dimer HHblits X-ray 2.20 0.29 0.06 ColD
3b8x.1.A 13.79 homo-dimer HHblits X-ray 1.70 0.29 0.06 Pyridoxamine 5-phosphate-dependentdehydrase
2gms.1.A 13.79 homo-dimer HHblits X-ray 1.80 0.29 0.06 Putative pyridoxamine 5-phosphate-dependent dehydrase, Wbdk1y4i.1.A 21.43 homo-tetramer HHblits X-ray 1.90 0.32 0.06 methionine gamma-lyase2x5d.1.A 28.57 homo-tetramer HHblits X-ray 2.25 0.32 0.06 PROBABLE AMINOTRANSFERASE2x5d.1.C 28.57 homo-tetramer HHblits X-ray 2.25 0.32 0.06 PROBABLE AMINOTRANSFERASE
1b9h.1.A 21.43 homo-dimer HHblits X-ray 2.00 0.32 0.06PROTEIN (3-AMINO-
5-HYDROXYBENZOIC ACIDSYNTHASE)
2x5d.1.D 28.57 homo-tetramer HHblits X-ray 2.25 0.32 0.06 PROBABLE AMINOTRANSFERASE2x5d.1.B 28.57 homo-tetramer HHblits X-ray 2.25 0.32 0.06 PROBABLE AMINOTRANSFERASE
3hl2.1.A 16.67 homo-tetramer HHblits X-ray 2.81 0.26 0.06 O-phosphoseryl-tRNA(Sec) seleniumtransferase3f0h.1.A 10.00 homo-dimer HHblits X-ray 1.70 0.26 0.06 Aminotransferase3b46.1.A 17.24 homo-dimer HHblits X-ray 2.00 0.29 0.06 Aminotransferase BNA32okk.1.A 17.24 homo-dimer HHblits X-ray 2.30 0.29 0.06 Glutamate decarboxylase 24l0o.1.A 17.24 homo-octamer HHblits X-ray 2.76 0.29 0.06 Cystathionine gamma-synthase3uwc.1.A 17.86 monomer HHblits X-ray 1.80 0.31 0.06 Nucleotide-sugar aminotransferase1mdo.1.A 28.57 monomer HHblits X-ray 1.70 0.31 0.06 ArnB aminotransferase3v75.1.A 21.43 homo-dimer HHblits X-ray 1.40 0.31 0.06 Orotidine 5'-phosphate decarboxylase3l52.1.A 21.43 homo-dimer HHblits X-ray 1.35 0.31 0.06 Orotidine 5'-phosphate decarboxylase4rit.1.A 17.24 homo-dimer HHblits X-ray 1.80 0.29 0.06 Pyridoxal-dependent decarboxylase4rj0.1.A 17.24 homo-dimer HHblits X-ray 1.95 0.29 0.06 Pyridoxal-dependent decarboxylase
3bb8.1.A 20.69 homo-dimer HHblits X-ray 2.35 0.29 0.06 CDP-4-keto-6-deoxy-D-glucose-3-dehydrase
3ou5.1.A 17.86 monomer HHblits X-ray 2.04 0.31 0.06 Serine hydroxymethyltransferase,mitochondrial1asc.1.A 28.57 homo-dimer HHblits X-ray 2.40 0.31 0.06 ASPARTATE AMINOTRANSFERASE1asb.1.A 28.57 homo-dimer HHblits X-ray 2.60 0.31 0.06 ASPARTATE AMINOTRANSFERASE1spa.1.A 28.57 homo-dimer HHblits X-ray 2.00 0.31 0.06 ASPARTATE AMINOTRANSFERASE3mkj.1.B 21.43 homo-tetramer HHblits X-ray 1.65 0.31 0.06 Methionine gamma-lyase1yaa.1.A 25.00 homo-dimer HHblits X-ray 2.05 0.31 0.06 ASPARTATE AMINOTRANSFERASE3maf.1.A 17.24 homo-dimer HHblits X-ray 2.97 0.28 0.06 sphingosine-1-phosphate lyase3mau.1.A 17.24 homo-dimer HHblits X-ray 2.90 0.28 0.06 sphingosine-1-phosphate lyase3mad.1.A 17.24 homo-dimer HHblits X-ray 2.00 0.28 0.06 Sphingosine-1-phosphate lyase4f4e.1.A 13.79 homo-dimer HHblits X-ray 1.80 0.28 0.06 Aromatic-amino-acid aminotransferase4eff.1.A 13.79 monomer HHblits X-ray 1.85 0.28 0.06 Aromatic-amino-acid aminotransferase
2d66.1.A 33.33 homo-dimer HHblits X-ray 2.18 0.34 0.06 Aspartate aminotransferase2yct.1.B 25.93 homo-tetramer HHblits X-ray 2.25 0.34 0.06 TYROSINE PHENOL-LYASE
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
2yct.1.A 25.93 homo-tetramer HHblits X-ray 2.25 0.34 0.06 TYROSINE PHENOL-LYASE
4lc3.1.A 37.04 homo-dimer HHblits X-ray 1.60 0.34 0.06Putative UDP-4-amino-4-deoxy-
l-arabinose--oxoglutarateaminotransferase
2z9v.1.A 21.43 homo-tetramer HHblits X-ray 1.70 0.31 0.06 Aspartate aminotransferase4e1o.1.A 16.67 homo-dimer HHblits X-ray 1.80 0.26 0.06 Histidine decarboxylase4awe.1.A 40.00 monomer HHblits X-ray 1.40 0.40 0.05 ENDO-BETA-D-1,4-MANNANASE
3hlm.1.A 10.34 homo-dimer HHblits X-ray 2.50 0.28 0.06 Aspartate aminotransferase,mitochondrial1d2f.1.A 17.86 homo-dimer HHblits X-ray 2.50 0.31 0.06 MALY PROTEIN4ixs.1.A 17.24 homo-tetramer HHblits X-ray 2.29 0.28 0.06 Cystathionine gamma-lyase-like protein4ixs.1.B 17.24 homo-tetramer HHblits X-ray 2.29 0.28 0.06 Cystathionine gamma-lyase-like protein4ixz.1.B 17.24 homo-tetramer HHblits X-ray 2.07 0.28 0.06 Cystathionine gamma-lyase-like protein1tar.1.A 10.34 homo-dimer HHblits X-ray 2.20 0.28 0.06 ASPARTATE AMINOTRANSFERASE1aka.1.A 10.34 homo-dimer HHblits X-ray 2.10 0.28 0.06 ASPARTATE AMINOTRANSFERASE1akb.1.A 10.34 homo-dimer HHblits X-ray 2.30 0.28 0.06 ASPARTATE AMINOTRANSFERASE1maq.1.A 10.34 homo-dimer HHblits X-ray 2.30 0.28 0.06 ASPARTATE AMINOTRANSFERASE2wk8.1.A 22.22 homo-dimer HHblits X-ray 2.10 0.33 0.06 CAI-1 AUTOINDUCER SYNTHASE2tpl.1.A 25.93 homo-tetramer HHblits X-ray 2.50 0.33 0.06 TYROSINE PHENOL-LYASE1tpl.1.B 25.93 homo-tetramer HHblits X-ray 2.30 0.33 0.06 TYROSINE PHENOL-LYASE1tpl.1.A 25.93 homo-tetramer HHblits X-ray 2.30 0.33 0.06 TYROSINE PHENOL-LYASE
2a3h.1.A 33.33 monomer HHblits X-ray 2.00 0.33 0.06 ENDOGLUCANASE1p3w.1.A 22.22 homo-dimer HHblits X-ray 2.10 0.33 0.06 Cysteine desulfurase2w4x.1.A 17.86 monomer HHblits X-ray 2.42 0.30 0.06 O-GLCNACASE BT_43952jiw.1.A 17.86 monomer HHblits X-ray 1.95 0.30 0.06 O-GLCNACASE BT_4395
2xm2.1.A 17.86 monomer HHblits X-ray 1.95 0.30 0.06 O-GLCNACASE BT_43952cho.1.A 17.86 hetero-oligomer HHblits X-ray 1.85 0.30 0.06 GLUCOSAMINIDASE2j4g.1.A 17.86 monomer HHblits X-ray 2.25 0.30 0.06 HYALURONOGLUCOSAMINIDASE4kam.1.A 29.63 homo-tetramer HHblits X-ray 2.00 0.33 0.06 O-acetylhomoserine sulfhydrylase MetC1v2d.1.A 13.79 homo-dimer HHblits X-ray 1.90 0.27 0.06 Glutamine Aminotransferase1v2e.1.A 13.79 homo-dimer HHblits X-ray 2.60 0.27 0.06 Glutamine Aminotransferase
1aat.1.A 10.34 homo-dimer HHblits X-ray 2.80 0.27 0.06 CYTOSOLIC ASPARTATEAMINOTRANSFERASE2cst.1.A 10.34 homo-dimer HHblits X-ray 1.90 0.27 0.06 ASPARTATE AMINOTRANSFERASE
2x3l.1.A 26.92 homo-dimer HHblits X-ray 2.00 0.36 0.05 ORN/LYS/ARG DECARBOXYLASEFAMILY PROTEIN4ixo.1.A 17.24 homo-dimer HHblits X-ray 2.20 0.27 0.06 NifS-like protein
4cvq.1.A 10.34 homo-dimer HHblits X-ray 2.11 0.27 0.06 GLUTAMATE-PYRUVATEAMINOTRANSFERASE ALAA3mc6.1.A 17.24 homo-dimer HHblits X-ray 3.15 0.27 0.06 Sphingosine-1-phosphate lyase4ix8.1.A 13.79 homo-dimer HHblits X-ray 2.35 0.27 0.06 Tyrosine aminotransferase3k40.1.A 6.67 homo-dimer HHblits X-ray 1.75 0.24 0.06 Aromatic-L-amino-acid decarboxylase3isl.1.A 14.29 homo-dimer HHblits X-ray 2.06 0.30 0.06 Purine catabolism protein pucG
4mkj.1.A 22.22 homo-tetramer HHblits X-ray 1.85 0.32 0.06 Methionine gamma-lyase4mkk.1.A 22.22 homo-tetramer HHblits X-ray 1.45 0.32 0.06 Methionine gamma-lyase2e7i.1.A 14.81 homo-dimer HHblits X-ray 3.00 0.32 0.06 Sep-tRNA:Cys-tRNA synthase
4oca.1.A 29.63 homo-dimer HHblits X-ray 2.30 0.32 0.06 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
1bs0.1.A 10.34 monomer HHblits X-ray 1.65 0.26 0.06 PROTEIN (8-AMINO-7-OXONANOATESYNTHASE)2g6w.1.A 10.34 homo-dimer HHblits X-ray 2.14 0.26 0.06 8-amino-7-oxononanoate synthase1dje.1.A 10.34 monomer HHblits X-ray 1.71 0.26 0.06 8-AMINO-7-OXONANOATE SYNTHASE
1dj9.1.A 10.34 monomer HHblits X-ray 2.00 0.26 0.06 8-AMINO-7-OXONONANOATESYNTHASE4cd6.1.A 26.92 monomer HHblits X-ray 1.64 0.35 0.05 ENDO-BETA-1,4-MANNANASE
3bcx.1.A 21.43 homo-dimer HHblits X-ray 2.40 0.29 0.06 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase
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Template SeqIdentity Oligo-stateFound
by Method ResolutionSeq
Similarity Coverage Description
2xh1.1.A 13.79 homo-dimer HHblits X-ray 2.10 0.26 0.06KYNURENINE/ALPHA-AMINOADIPATE
AMINOTRANSFERASE,MITOCHONDRIAL
2d64.1.A 34.62 homo-dimer HHblits X-ray 2.05 0.35 0.05 Aspartate aminotransferase1g4x.1.A 34.62 homo-dimer HHblits X-ray 2.20 0.35 0.05 ASPARTATE AMINOTRANSFERASE
1h0c.1.A 14.29 homo-dimer HHblits X-ray 2.50 0.29 0.06 SERINE--GLYOXYLATEAMINOTRANSFERASE
1lc5.1.A 21.43 homo-dimer HHblits X-ray 1.46 0.29 0.06 L-Threonine-O-3-PhosphateDecarboxylase
1lc8.1.A 21.43 homo-dimer HHblits X-ray 1.80 0.29 0.06 L-Threonine-O-3-PhosphateDecarboxylase4m2j.1.A 17.86 homo-dimer HHblits X-ray 2.95 0.29 0.06 Aminotransferase2yri.1.A 17.86 homo-dimer HHblits X-ray 2.05 0.29 0.06 Aminotransferase, class V1asf.1.A 34.62 homo-dimer HHblits X-ray 2.80 0.34 0.05 ASPARTATE AMINOTRANSFERASE1asg.1.A 34.62 homo-dimer HHblits X-ray 2.80 0.34 0.05 ASPARTATE AMINOTRANSFERASE2aeu.1.A 26.92 homo-dimer HHblits X-ray 1.70 0.34 0.05 Hypothetical protein MJ0158
1m32.1.A 25.93 homo-dimer HHblits X-ray 2.20 0.31 0.06 2-aminoethylphosphonate-pyruvateaminotransferase3e6g.1.A 17.86 homo-tetramer HHblits X-ray 2.80 0.28 0.06 Cystathionine gamma-lyase-like protein3e6g.1.B 17.86 homo-tetramer HHblits X-ray 2.80 0.28 0.06 Cystathionine gamma-lyase-like protein
1m7y.1.A 25.93 homo-dimer HHblits X-ray 1.60 0.31 0.06 1-aminocyclopropane-1-carboxylatesynthase
1m4n.1.A 25.93 homo-dimer HHblits X-ray 2.01 0.31 0.06 1-aminocyclopropane-1-carboxylatesynthase
1ynu.1.A 25.93 homo-dimer HHblits X-ray 2.25 0.31 0.06 1-aminocyclopropane-1-carboxylatesynthase
1b8g.1.A 25.93 homo-dimer HHblits X-ray 2.37 0.31 0.06 PROTEIN (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE)4o6z.1.A 6.90 homo-dimer HHblits X-ray 2.98 0.26 0.06 Serine hydroxymethyltransferase1h5v.1.A 34.62 monomer HHblits X-ray 1.10 0.34 0.05 ENDOGLUCANASE 5A1vep.1.A 22.22 monomer HHblits X-ray 2.06 0.31 0.06 Beta-amylase4q6r.1.A 14.29 homo-dimer HHblits X-ray 2.40 0.28 0.06 Sphingosine-1-phosphate lyase 12zc0.1.A 22.22 homo-tetramer HHblits X-ray 2.30 0.30 0.06 Alanine glyoxylate transaminase
3fdb.1.A 22.22 homo-dimer HHblits X-ray 1.99 0.30 0.06 putative PLP-dependentbeta-cystathionase2hzp.1.A 30.77 homo-dimer HHblits X-ray 2.00 0.33 0.05 Kynureninase3ei5.1.B 22.22 homo-dimer HHblits X-ray 2.05 0.30 0.06 LL-diaminopimelate aminotransferase2z1z.1.B 22.22 homo-dimer HHblits X-ray 2.40 0.30 0.06 LL-diaminopimelate aminotransferase3ei7.1.A 22.22 homo-dimer HHblits X-ray 1.99 0.30 0.06 LL-diaminopimelate aminotransferase3eia.1.A 22.22 homo-dimer HHblits X-ray 1.85 0.30 0.06 LL-diaminopimelate aminotransferase
3zrp.1.A 7.14 homo-dimer HHblits X-ray 1.75 0.27 0.06 SERINE-PYRUVATEAMINOTRANSFERASE (AGXT)
3zrr.1.A 7.14 homo-tetramer HHblits X-ray 1.99 0.27 0.06 SERINE-PYRUVATEAMINOTRANSFERASE (AGXT)1u08.1.