strategic health it advanced research projects (sharp) secondary use of ehr data principal...

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Strategic Health IT Advanced Research Projects (SHARP) Secondary Use of EHR Data Principal Investigator: Christopher G. Chute, MD, DrPH Program Manager: Lacey Hart, MBA, PMP Mayo Clinic, Rochester, MN ORGANIZATION COLLABORATORS Agilex Technologies, Inc. Centerphase Solutions, Inc. Clinical Data Interchange Standards Consortium (CDISC) Deloitte Group Health Research Institute Harvard Childrens Hospital Boston IBM T.J. Watson Research Center Intermountain Healthcare Mayo Clinic Massachusetts Institute of Technology Minnesota Health Information Exchange (MN HIE) University at Albany - SUNY University of Colorado University of Pittsburgh University of Utah AREA 4 PROGRAM Mayo Clinic, long a leader in the science of health care delivery, is proud to be a recipient of the Area 4 Strategic Health IT Advanced Research Project award. The SHARP Program – part of the Office of the National Coordinator for Health Information Technology, is focused on improving quality, safety and efficiency of health care through Information Technology. Traditionally, a patient’s medical information, such as medical history, exam data, hospital visits and physician notes, are stored inconsistently and in multiple locations, both electronically and non-electronically. Mayo Clinic’s program will work towards creating a unified electronic healthcare record (EHR), allowing for the exchange of information among care providers, government agencies, and other stake holders. Through six projects, Mayo Clinic’s program will: 1. Standardize health data elements and ensure data integrity Patient information can be stored using several different abbreviations and representations for the same piece of data. For example, “diabetes mellitus” (more commonly referred to as “diabetes”), can be referred to in a patient’s medical record alternately as “diabetic,” “249.00” and “DM.” The first phase of the project, called “Clinical Data Normalization”, will work towards transforming this non-standardized patient data into one unified set terminology. In this case, “diabetes mellitus,” “diabetic,” “249.00” and “DM” would all be re-named “diabetes.” 2. Merge and standardize patient data from non-electronic forms with the EHR Some important patient information, such as that from physician’s radiology and pathology notes, is stored in non- electronic, or “free text” form. This project will first work to merge the patient information in free texts with that in the electronic health care record. The next step, called “Natural Language Processing” (NLP), will work towards classifying certain tags, such as “diabetic,” “DM” and “57 year old male” under specific categories, such as “disease” or “demographics.” NLP, in addition to clinical data normalization, will help improve the efficiency of patient care by reducing inconsistencies in patient data, giving physicians more accurate and uniform information in a centralized location. 3. Seek physically observable patient traits for further study Physically observable traits or phenotypes. These traits result from interactions between a patient’s genes and environmental conditions. Mayo Clinic will use a process called “High- Throughput Phenotyping”, which uses clinical data normalization and NLP to identify and group a particular phenotype, such as Type 2 diabetes. This process will enhance a physician’s ability to identify and study individual or groups of phenotypes. 4. Find processes to make clinical data normalization, NLP and high-throughput phenotyping more efficient using fewer resources This part of the process will focus on building adequate computing resources and infrastructures to accomplish the previous steps. Called “Performance Optimization,” this system will allow for those seeking patient information to receive it quickly, increasing the efficiency of patient care. COLLABORATION Learn more about Mayo Clinic’s SHARP Area 4 Program process at http:// sharpn.org Health IT Pilot Communities through Recovery Act Beacon Community Program Principal Investigators: C. Michael Harper, Jr. M.D.; Christopher G. Chute, MD, DrPH; Douglas L. Wood, M.D. Program Manager: Lacey Hart, MBA, PMP Mayo Clinic, Rochester, MN PROGRAM ADVISORY COMMITTEE Suzanne Bakken, RN DNSc, Columbia University C. David Hardison, PhD, VP SAIC Barbara A. Koenig, PhD, Bioethics, Mayo Clinic Issac Kohane, MD PhD, i2b2 Director, Harvard Marty LaVenture, PhD MPH, Minnesota Department of Health Dan Masys, MD, Chair, Biomedical Informatics, Vanderbilt University Mark A. Musen, MD PhD, Division Head BMIR, Stanford University Robert A. Rizza, MD, Executive Dean for Research, Mayo Clinic Nina Schwenk, MD, Vice Chair Board of Governors, Mayo Clinic Kent A. Spackman, MD PhD, Chief Terminologist, IHTSDO Tevfik Bedirhan Üstün, MD, Coordinator Classifications, WHO SE MN POPULATION HEALTH SE MN community will embrace standards based HIE to improve access, quality and efficiency of health care delivery Childhood Asthma and Diabetes Reduce Emergency room visits Reduce unscheduled MD visits Reduce hospitalization Improve self-reported functioning Improve compliance with the treatment of asthma Improve school attendance Reduce days out of work – self-reported for Diabetes Improve compliance with Diabetes Conceptual Infrastructure BEACON COMMUNITIES Community Services Council of Tulsa, Tulsa, OK Delta Health Alliance, Inc., Stoneville, MS Eastern Maine Healthcare Systems, Brewer, ME Geisinger Clinic, Danville, PA HealthInsight, Salt Lake City, UT Indiana Health Information Exchange, INC., Indianapolis, IN Inland Northwest Health Services, Spokane, WA Louisiana Public Health Institute, New Orleans, LA Mayo Clinic Rochester, Rochester, MN Rhode Island Quality Institute, Providence, RI Rocky Mountain Health Maintenance Organization, Grand Junction, CO Southern Piedmont Community Care Plan, Inc., Concord, NC The Regents of the University of California at San Diego, San Diego, CA University of Hawaii at Hilo, Hilo, HI Western New York Clinical Information Exchange, Inc., Buffalo, NY Learn more about Mayo Clinic’s Beacon Program at http://informatics.mayo.edu/beacon Extend advanced health IT & exchange infrastructure Leverage data to inform specific delivery system & payment strategies Demonstrate a vision of the future where: •Hospitals, clinicians, & patients are meaningful users of health IT •Communities achieve measurable & sustainable improvements in health care quality, safety, efficiency, and Fillmore county Fillmore county Dodge county Dodge county Freeborn county Freeborn county Goodhue county Goodhue county Houston county Houston county Mower county Mower county Olmsted county Olmsted county Rice county Rice county Steele county Steele county Wabasha county Wabasha county Winona county Winona county Nursing homes Nursing homes Public health Public health Hospitals Hospitals Emergency rooms Emergency rooms Home health Home health Schools Schools Out-patient clinics Out-patient clinics Mayo Clinic Mayo Clinic Olmsted Medical Olmsted Medical Mayo Health System Mayo Health System Winona Health Winona Health Map data © 2010 Google, INEGI VA VA MN Dept Employee Relat. MN Dept Employee Relat. MN Dept of Health MN Dept of Health MN Dept Human Services MN Dept Human Services Agilex Agilex MN MN Cnty Cnty Comp Coop Comp Coop MN HIE MN HIE Stratis Stratis Mayo Mayo Olmsted Olmsted Medical Cntr Medical Cntr Mayo Health Mayo Health System System Winona Winona Health Health EMR’s EMR’s MN HIE MN HIE exchange exchange Public health Public health (NH’s, schools, (NH’s, schools, home health) home health) Portal Portal Portal Portal Population Population management management Analysis Analysis (and reporting (and reporting to practice) to practice) Portal Portal Portal Portal Portal Portal Portal Portal Portal Portal Portal Portal

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Page 1: Strategic Health IT Advanced Research Projects (SHARP) Secondary Use of EHR Data Principal Investigator: Christopher G. Chute, MD, DrPH Program Manager:

Strategic Health IT Advanced Research Projects (SHARP)Secondary Use of EHR Data

Principal Investigator: Christopher G. Chute, MD, DrPHProgram Manager: Lacey Hart, MBA, PMP

Mayo Clinic, Rochester, MN

ORGANIZATION COLLABORATORSAgilex Technologies, Inc.

Centerphase Solutions, Inc.

Clinical Data Interchange Standards Consortium (CDISC)

Deloitte

Group Health Research Institute

Harvard Childrens Hospital Boston

IBM T.J. Watson Research Center

Intermountain Healthcare

Mayo Clinic

Massachusetts Institute of Technology

Minnesota Health Information Exchange (MN HIE)

University at Albany - SUNY

University of Colorado

University of Pittsburgh

University of Utah

AREA 4 PROGRAMMayo Clinic, long a leader in the science of health care delivery, is proud to be a recipient of the Area 4 Strategic Health IT Advanced Research Project award. The SHARP Program – part of the Office of the National Coordinator for Health Information Technology, is focused on improving quality, safety and efficiency of health care through Information Technology.

Traditionally, a patient’s medical information, such as medical history, exam data, hospital visits and physician notes, are stored inconsistently and in multiple locations, both electronically and non-electronically. Mayo Clinic’s program will work towards creating a unified electronic healthcare record (EHR), allowing for the exchange of information among care providers, government agencies, and other stake holders.

Through six projects, Mayo Clinic’s program will:1. Standardize health data elements and ensure data integrityPatient information can be stored using several different abbreviations and representations for the same piece of data. For example, “diabetes mellitus” (more commonly referred to as “diabetes”), can be referred to in a patient’s medical record alternately as “diabetic,” “249.00” and “DM.” The first phase of the project, called “Clinical Data Normalization”, will work towards transforming this non-standardized patient data into one unified set terminology. In this case, “diabetes mellitus,” “diabetic,” “249.00” and “DM” would all be re-named “diabetes.”

2. Merge and standardize patient data from non-electronic forms with the EHRSome important patient information, such as that from physician’s radiology and pathology notes, is stored in non-electronic, or “free text” form. This project will first work to merge the patient information in free texts with that in the electronic health care record. The next step, called “Natural Language Processing” (NLP), will work towards classifying certain tags, such as “diabetic,” “DM” and “57 year old male” under specific categories, such as “disease” or “demographics.” NLP, in addition to clinical data normalization, will help improve the efficiency of patient care by reducing inconsistencies in patient data, giving physicians more accurate and uniform information in a centralized location.

3. Seek physically observable patient traits for further studyPhysically observable traits or phenotypes. These traits result from interactions between a patient’s genes and environmental conditions. Mayo Clinic will use a process called “High-Throughput Phenotyping”, which uses clinical data normalization and NLP to identify and group a particular phenotype, such as Type 2 diabetes. This process will enhance a physician’s ability to identify and study individual or groups of phenotypes.

4. Find processes to make clinical data normalization, NLP and high-throughput phenotyping more efficient using fewer resourcesThis part of the process will focus on building adequate computing resources and infrastructures to accomplish the previous steps. Called “Performance Optimization,” this system will allow for those seeking patient information to receive it quickly, increasing the efficiency of patient care.

5. Detect and reconcile inconsistent dataMayo Clinic will utilize high-confidence services, or “data quality metrics,” to identify and optionally correct inconsistent or conflicting data.

6. Evaluate the progress and efficiency of Mayo Clinic’s projectThis program will use an “Evaluation Framework” using the Nationwide Health Information Network (NHIN). NHIN is a set of standards, services and policies that enable secure health information exchange over the internet.

COLLABORATION

Learn more about Mayo Clinic’s SHARP

Area 4 Program process at http://sharpn.org

Health IT Pilot Communities through Recovery Act Beacon Community Program

Principal Investigators: C. Michael Harper, Jr. M.D.; Christopher G. Chute, MD, DrPH; Douglas L. Wood, M.D. Program Manager: Lacey Hart, MBA, PMP

Mayo Clinic, Rochester, MN

PROGRAM ADVISORY COMMITTEESuzanne Bakken, RN DNSc, Columbia University

C. David Hardison, PhD, VP SAICBarbara A. Koenig, PhD, Bioethics, Mayo Clinic Issac Kohane, MD PhD, i2b2 Director, Harvard

Marty LaVenture, PhD MPH, Minnesota Department of Health Dan Masys, MD, Chair, Biomedical Informatics, Vanderbilt University Mark A. Musen, MD PhD, Division Head BMIR, Stanford University

Robert A. Rizza, MD, Executive Dean for Research, Mayo Clinic Nina Schwenk, MD, Vice Chair Board of Governors, Mayo Clinic

Kent A. Spackman, MD PhD, Chief Terminologist, IHTSDOTevfik Bedirhan Üstün, MD, Coordinator Classifications, WHO

SE MN POPULATION HEALTHSE MN community will embrace standards based HIE to improve

access, quality and efficiency of health care delivery

Childhood Asthma and DiabetesReduce Emergency room visits

Reduce unscheduled MD visits

Reduce hospitalization

Improve self-reported functioning

Improve compliance with the treatment of asthma

Improve school attendance

Reduce days out of work – self-reported for Diabetes

Improve compliance with Diabetes

Conceptual Infrastructure

BEACON COMMUNITIESCommunity Services Council of Tulsa, Tulsa, OK

Delta Health Alliance, Inc., Stoneville, MS

Eastern Maine Healthcare Systems, Brewer, ME

Geisinger Clinic, Danville, PA

HealthInsight, Salt Lake City, UT

Indiana Health Information Exchange, INC., Indianapolis, IN

Inland Northwest Health Services, Spokane, WA

Louisiana Public Health Institute, New Orleans, LA

Mayo Clinic Rochester, Rochester, MN

Rhode Island Quality Institute, Providence, RI

Rocky Mountain Health Maintenance Organization, Grand Junction, CO

Southern Piedmont Community Care Plan, Inc., Concord, NC

The Regents of the University of California at San Diego, San Diego, CA

University of Hawaii at Hilo, Hilo, HI

Western New York Clinical Information Exchange, Inc., Buffalo, NY

Learn more about Mayo Clinic’s Beacon Program at http://informatics.mayo.edu/beacon

Extend advanced health IT & exchange

infrastructure

Leverage data to inform specific

delivery system & payment strategies

Demonstrate a vision of the future where:

•Hospitals, clinicians, & patients are meaningful users of health IT

•Communities achieve measurable & sustainable improvements in health care quality, safety, efficiency, and population health

Fillmore countyFillmore countyFillmore countyFillmore county

Dodge countyDodge countyDodge countyDodge county

Freeborn countyFreeborn countyFreeborn countyFreeborn county

Goodhue countyGoodhue countyGoodhue countyGoodhue county

Houston countyHouston countyHouston countyHouston county

Mower countyMower countyMower countyMower county

Olmsted countyOlmsted countyOlmsted countyOlmsted county

Rice countyRice countyRice countyRice county

Steele countySteele countySteele countySteele county

Wabasha countyWabasha countyWabasha countyWabasha county

Winona countyWinona countyWinona countyWinona county

Nursing homesNursing homesNursing homesNursing homes

Public healthPublic healthPublic healthPublic health

HospitalsHospitalsHospitalsHospitals

Emergency roomsEmergency roomsEmergency roomsEmergency rooms

Home healthHome healthHome healthHome health

SchoolsSchoolsSchoolsSchools

Out-patient clinicsOut-patient clinicsOut-patient clinicsOut-patient clinics

Mayo ClinicMayo ClinicMayo ClinicMayo Clinic

Olmsted MedicalOlmsted MedicalOlmsted MedicalOlmsted Medical

Mayo Health SystemMayo Health SystemMayo Health SystemMayo Health System

Winona HealthWinona HealthWinona HealthWinona Health

Map data © 2010 Google, INEGI

VAVAVAVA

MN Dept Employee Relat.MN Dept Employee Relat.MN Dept Employee Relat.MN Dept Employee Relat.

MN Dept of HealthMN Dept of HealthMN Dept of HealthMN Dept of Health

MN Dept Human ServicesMN Dept Human ServicesMN Dept Human ServicesMN Dept Human Services

AgilexAgilexAgilexAgilex

MN MN CntyCnty Comp Coop Comp CoopMN MN CntyCnty Comp Coop Comp Coop

MN HIEMN HIEMN HIEMN HIE

StratisStratisStratisStratis

MayoMayoMayoMayo

OlmstedOlmstedMedical CntrMedical Cntr

OlmstedOlmstedMedical CntrMedical Cntr

Mayo Health Mayo Health SystemSystem

Mayo Health Mayo Health SystemSystem

Winona Winona HealthHealth

Winona Winona HealthHealth

EMR’sEMR’sEMR’sEMR’s

MN HIEMN HIEexchangeexchangeMN HIEMN HIE

exchangeexchange

Public healthPublic health(NH’s, schools, (NH’s, schools,

home health)home health)

Public healthPublic health(NH’s, schools, (NH’s, schools,

home health)home health)

PortalPortalPortalPortal

PortalPortalPortalPortal

PopulationPopulationmanagementmanagementPopulationPopulation

managementmanagement

AnalysisAnalysis(and reporting(and reporting

to practice)to practice)

AnalysisAnalysis(and reporting(and reporting

to practice)to practice)

PortalPortalPortalPortal

PortalPortalPortalPortal

PortalPortalPortalPortal

PortalPortalPortalPortal

PortalPortalPortalPortal

PortalPortalPortalPortal