)rufh phdvxuhphqw 0rohfxodu prwru &dqfhu fhoo …motor1.physics.wayne.edu/~cinabro/cinabro/...0\...

36
Force measurement: Molecular motor & Cancer cell migration Takeshi Sakamoto Associate Professor Department of Physics and Astronomy Wayne State University

Upload: others

Post on 27-Jul-2020

1 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Force measurement:Molecular motor

&Cancer cell migration

Takeshi SakamotoAssociate ProfessorDepartment of Physics and AstronomyWayne State University

Page 2: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Takeshi SakamotoAssociate ProfessorDepartment of Physics and AstronomyWayne State University

Force measurement:Molecular motor

&Cancer cell migration

Page 3: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

My labs focus on..

(1) Determine the force-generation map of cancer cell; controlling metastasis

(2) Determine the mechanical property of the motor by using TIRF microscope and optical trap

Page 4: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

My labs focus on..

(1) Determine the force-generation map of cancer cell; controlling metastasis

(2) Determine the mechanical property of the motor by using TIRF microscope and optical trap

Page 5: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Metastasis of the cancer cell&

New protein, TRIOBP, in cancer

Page 6: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Traction Force Microscope

Page 7: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv
Page 8: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

My labs focus on..

(1) Determine the force-generation map of cancer cell; controlling metastasis

(2) Determine the mechanical property of the motor by using TIRF microscope and optical trap

Single molecule motility assay

Single molecule Force measurement by optical tweezers

Page 9: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

My labs focus on..

(1) Determine the force-generation map of cancer cell; controlling metastasis

(2) Determine the mechanical property of the motor by using TIRF microscope and optical trap

Single molecule motility assay

Single molecule Force measurement by optical tweezers

Page 10: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

The function of myosins are very wide variety

Muscle contraction

Page 11: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

The size of things

Page 12: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

What kind of motor in our body?

Myosin

Kinesin

Dynein

Rotation motor

Yasuda R, Cell, 1998

Page 13: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Conventional myosin

Myosin V: a cargo transportermelanosome, mRNA,

endoplasmic reticulum

Page 14: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv
Page 15: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Cytokinesis

Vesicle transportation

Page 16: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Humans have

39 myosins

from 12 classes

From Berg et al. Mol. Biol. Cell 12: 780, 2001

Myosin Motor Family in Humans

Page 17: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Myosin V

○ N-terminus motor domain,○ 6 light chain binding sites

(CaM or light chain (ELC))IQxxxRGxxxR : 23~25 aa

○ Tails have Coiled-coil andglobular domain

○ Does not form filaments

♠ Transport cargo♠ Processive motor

Walker M., et al., 2000, Nature, 405

Page 18: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Myosin V

Actin filament

○ N-terminus motor domain,○ 6 light chain binding sites

(CaM or light chain (ELC))IQxxxRGxxxR : 23~25 aa

○ Tails have Coiled-coil andglobular domain

○ Does not form filaments

♠ Transport cargo♠ Processive motor

Page 19: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Myosin V

Actin filament

Motor domain

Actin bingin domainATP bindingATP hydrolysis energy convert into force

Page 20: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Myosin V

Actin filament

Neck region and light chain

-helix on heavy chain6 IQ motifs: IQxxxRGxxxR,

23~25 aminoacidLight chain: Calmodulin

Essential light chainMeasurering stiffness

Lever arm

Page 21: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Myosin V

Actin filament

Neck region and light chain

Coiled-coil : dimerize two heavy chain

Page 22: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Myosin V

Actin filament

Neck region and light chain

Coiled-coil

Globular tail :cellular functionsBinding another protein: Rab27a

Page 23: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Courtesy ofJohn Hammer andXufeng Wu, NIH

The “Dilute” Mouse is a Good Model for Griscelli’s Disease

Wild type Dilute Melanocytes

Page 24: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Courtesy ofJohn Hammer andXufeng Wu, NIH

The “Dilute” Mouse is a Good Model for Griscelli’s Disease

Wild type Dilute Melanocytes

Page 25: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Wu X and Sakamoto T, et al. , FEBS Lett.

580 :5863-8, 2006.

Movement of the myosin V-melanophilin-Rab27acomplex

Cy3-CaM GFP-Rab27a

4 m

Rhodamine-actin with GFP-Rab27a

GFP-Rab27a

Page 26: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Total Internal Reflection Fluorescent Microscopy (TIRF) and

single molecule motility assay

Ez = Eo exp(-z/dz)

2n

dz =

Penetration depth of evanescent wave

Page 27: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Wide-field Fluorescence TIRF

Advantage of TIRF Microscopy

Page 28: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Total Internal Reflection Fluorescent Microscopy

10x real time

Page 29: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Fluorescent Imaging at One Nanometer Accuracy

FIONA

Yildiz A, et. al., Science, 2003

>40,000 photons ~ 1.5 nm accuracy

510152025303540

-50

0

50

100

150

200

5 10 15 20 25 30 35 40

Conditions: < 300 nM ATP

Page 30: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Recently, Dr. Warshaw have demonstrated that heads ofmyosin V alternatively steps on actin filament.

Page 31: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Stepping Trace of Myosin V longer neck (8IQ) mutant

300nM ATP

6 IQ

Page 32: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Three models of myosin V movement

Tight couplingCenter of mass 36nmEach head steps 72nm

Diffuse movement ~36nm

Current 5.5 nm x 3 = 16.5 nmOkada T et al., 2007, B.B.R.C

step size 36nm

Page 33: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Tractor beam in the space

Trapping beam in the lab

Trap an object by LASER light

Page 34: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

LASER trapping for 1 µm spherical bead

Monitor

Page 35: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

Optical trap study of single myosin VIn vitro motility study

Mehta AD, Nature. 1999;400:590-3

Page 36: )RUFH PHDVXUHPHQW 0ROHFXODU PRWRU &DQFHU FHOO …motor1.physics.wayne.edu/~cinabro/cinabro/...0\ odev irfxv rq 'hwhuplqh wkh irufh jhqhudwlrq pds ri fdqfhu fhoo frqwuroolqj phwdvwdvlv

My labs focus on..

(1) Determine the force-generation map of cancer cell; controlling metastasis

(2) Determine the mechanical property of the motor by using TIRF microscope and optical trap

Single molecule motility assay

Single molecule Force measurement by optical tweezers