Node

ROBCOOKCEO

•  Not-for-profitcompany

•  Since2000•  Staffsecondedfrommembers

•  Assetsbelongtomembers

•  Projectsexecutedbymembers

•  eResearchinfrastructure

•  NaAonalprojects–Nectar,RDS

QCIF: The Basics

QueenslandCyberInfrastructureFounda9on

Strategic Direc8ons

Lifesciencesandhealthinforma9cs

Environmentalandterrestrialinforma9cs …Otherdomains

Datainnova9on Skillsdevelopment

Accesstodigitalinfrastructure

Local Na9onal Commercial

Bioinforma8cs Services

•  Shareddevelopment,opera9onsforQueenslandresearchNa9onalPlaJorms

•  ArachnoserverandothersTools

•  Storageandaccessforlargedatacollec9ons(genomes,images)Data

•  Trainingprogramsformemberuniversi9esandBPA•  Bioinforma9csskills,soNwareanddatacarpentrySkills

•  Datachaperoningwithinterna9onalcollec9onsInterna9onalEngagement

•  SpecialisedlifesciencesHPC,researchcloudcompu9ng(largememory)•  Verylargestorage,dataaccess,analy9csInfrastructure

• Memberhealthandlifesciences,Queenslandhealth•  Bioinforma9cs,biosta9s9cs,biodata

Expertconsul9ng

Pla?orms

q Developmentq Customisa9onq Hos9ngq Support

Characterisa9onVirtualLab(Monash)Med.data(Intersect)

GenomicsVirtualLab(VLSCI) Mul9omicsPlaJorm(BPA++)

Skill development

•  ManymoreresearchersleveragingIT–skillsdevelopmentatscale

•  Trainingforresearchersandtrainingmaterialstomatchdemand

•  Threekeyareas:•  Effec9veuseofcompu9nganddata,•  Applica9onofbioinforma9cs•  QRIScloudstorage,managementandcomputetools

•  Integratedhigh-touchusersupportandservicedelivery

Be[erresearch

Skills

Support

Interna8onal – Data chaperoning

•  GuidanceandsupporttohelpAustralianresearcherswiththeprocessofcura9ng,forma\ngandmanagingresearchdatafortransfertoexis9nginterna9onaldatarepositories

o  Managementofsubmissionaccountso  Helpdesko  Submissiono  Automa9on

TheBiomeofAustraliaSoilEnvironmentsMarineMicrobesGreatBarrierReef SpiderToxins

Archnoserver & Tox|Note

Themostcomprehensivecurateddatabaseofspidertoxins(GlennKing–UQ)

SubmitCross-

reference

What our members are telling us

•  CustomisedPlaJorms•  Abilitytoaccessacoresuiteoftools•  AbilitytohaveplaJormscustomisedforspecificuse•  Metagenomics,mul9-omics,sensi9vedataandimaging

•  Skillsdevelopment•  Empoweringbiologistsandclinicianstoharnesscomputa9on

•  Consul9ngservices•  Abilitytoengagebioinforma9ciansasapercentageofthetotalfull-9meequivalenttoworkonprojectsasneeded

•  Inclusionofbioinforma9csskillsingrantapplica9ons

What our members are telling us (2)

•  Lifesciencesspecialisedcomputeo  Specialisedinfrastructuresuchasbigmemory,clustersinthecloud,highthroughputcompu9ng

o  CloudtechnologiesforbigdatasuchasApacheSparkandHadoop

•  Inconvenientlylargedatao Accesstodatacollec9onso Helpwithsubmissionsofdatatointerna9onalrepositories§  Largenumberofsubmissions§  Complexsubmissions§  Supportforbou9quecollec9ons

#1 Priority for Bioinforma8cs in Australia

•  Fully-func9onalna9onalbioinforma9csnetwork

• Governance,charter,structureandplanStrategic

• Empowerscien9sts&clinicianstousena9onal&interna9onalplaJorms

• Hos9ng,support,training,customisa9on

PlaJormsandInfrastructure

• Datachaperoning• Omics

QCIFNode

THANK YOU QUESTIONS?

QCIF Structure

ServiceDelivery

DominiqueGorseAnneBernardPierreChaumeilXin-YiChuaAnneKunertNickRhodesJus9nSco[MikeThangMarkCroweKathyDallestIngridBaade

NigelWard

BelindaWeaverHoylenSue

MarliesHenkel(eRAUQ)CihanAtlinay(eRAUQ)NickHamilton(eRAUQ)MinhDinh(eRAUQ)DavidGreen(eRAUQ)

MarcusFitzpatrick(eRAGU)CollinStorlie(eRAJCU)JasonBell(eRACQU)

FrancisGacenga(eRAUSQ)

Outreach&Engineering

LifeScienceConsul9ng

StephenBird

StephenCrawleyAdrianLee

JayvanSchyndelMikeMallon

Mar9nNichollsRyurickHristevDenisLubjanskiBre[Milford

GavinKennedyHamishHolewaAndrewWhiteAndrewBrazza9Ma[MulhollandShiloBanihit

eResearch

Associate member

Compute

Associate member

•  Computeanddatastoragetomeetmemberservicetransi9ontoQRIScloudandnewpartnerservices

•  Reducedtotalcostofserviceopera9onstomembers•  Trustedresilientlong-livedproduc9onservices•  Servicesmee9ngdelivery,ease-of-useandqualityneedsofmembersandresearchcommuni9es

•  Integra9onwithmemberservicedeliverytotheirresearchers

•  Con9nualserviceimprovementandre-inven9on

•  Seamlessintegra9onwithna9onalandcommercialdigitalinfrastructure

DATA

•  Seamlessintegra9onbetweenpublica9ons,dataandresearchersacrosstheresearchlifecycle

•  Maturedatacapture,ingest,cura9on,metadataannota9onandlife9memanagement

•  Loca9onindependentdiscovery,iden9ty-dependentaccess,compute,collabora9onandsharing

•  Reliable,secure,trustedandpreserved•  FAIR–findable,accessible,interoperable,re-usable

•  Bigdatascienceandanaly9cscapability•  Informa9on,knowledgemanagement

Ac9veResearch

Share

Publish

Preserve

Metadata

Data

CaptureIngestAnaly9csManageAugment

ShareCollaborateDiscoverAccess

PublishCatalogueRe-useDistributeStandardise

ArchivePreserve

Discard