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VIRUSES vs. BACTERIA 1 VIRUSES: 20-1 BACTERIA: 20-2

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Page 1: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

VIRUSES vs.

BACTERIA

1

BACTERIA

VIRUSES: 20-1

BACTERIA: 20-2

Page 2: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

• Vocabulary

– Virus

– Bacteriophage

– Capsid

– Lytic cycle

– Lysogenic cycle

– Retrovirus

• Key Concepts

– What is the difference

between a virus and a

bacteria?

– How do virus/bacteria

reproduce?

– Importance of

virus/bacteria

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– Retrovirus

– Binary fission

– Conjugation

– Obligate Anaerobe

– Obligate Aerobe

– Endospore

virus/bacteria

Page 3: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

What is a virus?

• viruses are non-cellular particles made up of genetic material (DNA or

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made up of genetic material (DNA orRNA… not both) and protein that can invade living cells

Page 4: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

Are Viruses Alive?• like living things,

viruses have genetic material and they can pass this on to future generations

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generations• BUT, unlike living

things, viruses are notmade of cells

• outside of a cell, they don't reproduce, feed, or grow

• Therefore, most biologists consider viruses nonliving

Page 5: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

What do viruses do?

• viruses can invade the cells of plants, animals, and bacteria

• viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies,

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chicken pox, herpes, AIDS, polio, rabies, measles, mumps…

Chicken pox

Page 6: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

What do viruses look like?• a virus is made of a core of genetic material surrounded by a protein coat (CAPSID)

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• viruses are SMALL!! (20-400 nanometers)

Bar = 100nm

Page 7: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

• viruses come in a variety shapes: rod-shaped; tadpole-shaped; helical; cubelike (see pg 575)

T-4 bacteriophageHuman Influenza

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T-4 bacteriophageHuman Influenza

virus particles

Page 8: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

How do viruses reproduce?

• viruses insert their genetic material into a host cell– The CAPSID (outside protein) “tricks” the cell into allowing it inside

• once inside, the viral genes take over

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• once inside, the viral genes take over

• The “hijacked” cell transcribes the viral genes– Uses the host cells own enzymes (ex: DNA Polymerase)

• one of the ways a virus takes over a cell is

described as the LYTIC CYCLE

Page 9: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

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Page 10: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

LYTIC CYCLE• The cells lyse (burst) when the concentration of new viral particles is high

• The lytic cycle has its name because the host cell lyses and allows viral particles to escape

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Page 11: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

LYSOGENIC CYCLE

• Host cell is not immediately overtaken

• Viral nucleic acid is inserted into host • Viral nucleic acid is inserted into host cell’s DNA

• Host cell copies own DNA along with viral DNA

• Host cell multiples along with viral DNA

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Page 12: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

• Each generation of daughter cells is infected with virus

• Prophage = bacteriophage’s DNA is • Prophage = bacteriophage’s DNA is imbedded host’s DNA

• Environmental trigger (e.g. heat, chemicals, etc…) activates prophage

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Page 13: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

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Page 14: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

RETROVIRUSES:• contain RNA as their genetic material

• retroviruses infect a cell and produce a DNA copy of their RNA

– (retro = backward; RNA is copied in to DNA)

• this DNA is inserted into the host cell's DNA

• example of retroviruses:

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• example of retroviruses:

HIV

Page 15: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

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Page 16: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

How Can You Protect Yourself From Viral Infections?

• The best way: use of vaccines

– Preparation of weakened or killed virus or viral proteins

– When injected, the vaccine stimulates

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– When injected, the vaccine stimulates the immune system

– Sometimes produces permanent immunity

• Protect yourself

– Stay away from known sick people– Wash your hands often

Page 17: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

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Page 18: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

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Page 19: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

How are Bacteria Different?

• Bacteria are different in that they:

– Are much bigger– Have a different structure (made of cells) �

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– Have a different structure (made of cells) �therefore are considered “LIVING”

– Reproduce differently (asexual and sexual)

• Bacteria are prokaryotes (no nucleus)• Bacteria Have 2 Kingdoms: Archaebacteria and Eubacteria

Page 20: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

Some bacteria you

probably familiar

with…

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Page 21: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

The Size of Bacteria

• Prokaryotes typically range in size from 1-5um (micrometers)

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Page 22: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

The Structure of Bacteria• 3 basic shapes: rod-shaped, spherical shaped, spiral-shaped

• they may form long chains, large clumps/clusters, or colonies

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• they may form long chains, large clumps/clusters, or colonies

• cell wall

• movement: propelled by flagella or cilia

Page 23: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

“Breathing” (RESPIRATION) in Bacteria

• some are aerobic: respiration involves

oxygen

– obligate aerobes-cannot survive without oxygen

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– obligate aerobes-cannot survive without oxygen

• some are anaerobic: respiration without

oxygen

– obligate anaerobes-cannot survive with oxygen

Page 24: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

How Do Bacteria Obtain Energy?

• some make their own food (like plants)= AUTOTROPHS

• some obtain their food (like us)=

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HETEROTROPHS

These bacteria eat the

nutrients in the agar.

Page 25: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

Reproduction in Bacteria• most reproduce through binary fission (asexual) =

clones

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Page 26: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

• Other bacteria exchange genetic information through CONJUGATION(a.k.a. bacteria sex)– A hollow bridge forms between the 2 bacterial cells and

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bacterial cells and genes move from 1 bacterium to the other

– ADVANTAGE: increases genetic diversity in the bacterial population

Page 27: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

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•If food and space are not an issue, bacteria divide at astonishing rates!

•Some can divide every 20 minutes!!

•If this were to continue to happen, the bacteria would reach a mass of 4000x the mass of the

Earth in 48 hours!YUCK!!!

Page 28: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

EXPONENTIAL GROWTH!!!EXPONENTIAL GROWTH!!!EXPONENTIAL GROWTH!!!EXPONENTIAL GROWTH!!!

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Page 29: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

How Bacteria Can Be Controlled:

• sterilization: – heating/boiling OR use a disinfectant (alcohol, bleach� chemical)

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(alcohol, bleach� chemical)

• food processing: – boiling, frying, steaming, refrigeration, salt, vinegar

Page 30: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

As labeled by

humans, there are

both “BAD” bacteria

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both “BAD” bacteria

and “GOOD”

bacteria.

Page 31: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

• Bacteria that causes illness and disease (pathogenic)

• Bacterial diseases:

– diptheria, tuberculosis, typhoid fever, tetanus,

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– diptheria, tuberculosis, typhoid fever, tetanus, syphilis, cholera, bubonic plague

• How are the diseases caused?

– Bacteria damage the cells & tissues of an organism directly by breaking down the tissues for food

– Or… Bacteria release toxins (poisons) that travel through the organisms body

Page 32: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

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WARNING: Disturbing

Picture!!

Page 33: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

Ocean warning!

33Flesh-eating bacteria

Page 34: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

•Bacteria that humans use and need in

their everyday lives.

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Escherichia coli (Esh-er-ish-e-ah coal-eye): one of many kinds of microbes that live in your gut. Wanted for helping you digest your food every day.

Page 35: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

Lactobacillus acidophilus (lack-toe-bah-sill-us acid-off-ill-us): one of the bacteria gang wanted for turning milk into yogurt.

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Saccharomyces cerevisiae (sack-arrow-my-seas sair-uh-vis-ee-ay): a.k.a. baker's yeast. Wanted for making bread rise.

Pseudomonas putida(sue-doe-moan-us poo-tea-dah): one of many microbes wanted for cleaning wastes from sewage water at water treatment plants.

Page 36: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

Arbuscular

Streptomyces(strep-toe-my-seas): soil bacteria wanted for making streptomycin, an antibiotic used to treat infections.

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Arbuscular mycorrhizas (ar-bus-que-ler my-kuh-rye-zuh): one of a soil-living fungus family. Wanted for helping crops take up nutrients from the soil.

Bacillus thuringiensis (bah-sill-us ther-in-gee-in-sis): a.k.a "Bt", a common soil bacterium. Wanted as a natural pest-killer in gardens and on crops.

Page 37: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

Good Bacteria in Summary

1. Nitrogen Fixation• Most organisms

need nitrogen for DNA, RNA, proteins, and ATP

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DNA, RNA, proteins, and ATP

• Few organisms can convert nitrogen gas into useable nitrogen so they need help of legumes (beans, etc…)

Page 38: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

2. Recycling of NutrientsExample: Decomposers

3. Foods and Medicines

4. ProducersExample: Prochlorococcus

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Example: Prochlorococcusaccounts for more ½ of primary production in open oceans

Antibiotics

Page 39: NOTES- VIRUSES vs. BACTERIA 2013 · animals, and bacteria • viruses cause illness like colds, flu’s, chicken pox, herpes, AIDS, polio, rabies, 5 ... your food every day. Lactobacillus

How Do You Treat a Bacterial Infection?

• If prevention fails, take antibiotics• Antibiotics kill bacteria without harming the cells of humans or animals– They interfere with the cellular processes of

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– They interfere with the cellular processes of bacteria

• Many antibiotics are produced naturally by living organisms– Ex: penicillin

• Others are synthetic (man-made)