limnol. oceanogr., 35(4), 1990, 7954308 q 1990, by the ...€¦ · depth intervals with a yellow...

14
Limnol. Oceanogr., 35(4), 1990, 7954308 Q 1990, by the American Society of Limnology and Oceanography, IIIC. Planktonic community structure determines the fate of bacterial production in a temperate lake Michael L. Pace, George B. McManus, 1 and Stuart E. G. Findlay Institute of Ecosystem Studies, New York Botanical Garden, Box AB, Millbrook 12545 Abstract We examined the fate of planktonic bacterial production and the balance between bacterial growth and grazing mortality in the surface waters of Upton Lake, New York. Growth rates were measured by the incorporation of t3H]thymidine into DNA. Grazing rates on bacteria were de- termined with small cells produced by a mutant strain ofEscherichia coli and made either fluorescent or radioactive to monitor feeding. Bacterial community turnover times calculated from either growth or grazing rates ranged from 1.5 to 16 d. On the basis of these data and results from 29 other studies, most bacterial communities appear to have turnover times substantially > 1 d. Our measurements of feeding rates on bacteria frequently exceeded estimates of growth. Limitations of precision and doubts about the accuracy of methods make attempts to balance measurements of bacterial growth and grazing with current techniques unrealistic. The fate of bacterial production depends on planktonic community structure. Flagellates were the primary consumers of bacteria in winter and fall. At other times, Daphnia galeata consumed most of the bacterial production. Ciliates and rotifers were never important bacterial grazers. In Upton Lake large populations of Daphnia effectively “break” the microbial loop and funnel bacterial production to higher con- sumers. In the plankton of most aquatic ecosys- tems, bacterial production is -30% of pri- mary production on an areal basis (Cole et al. 1988). If we assume growth efficiencies of lo-50% (Pomeroy and Wiebe 1988), planktonic bacteria process more than half of the organic C produced in aquatic sys- tems. Furthermore, these organisms either recycle or sequester substantial quantities of nutrients depending on nutrient conditions and trophic interactions (Caron et al. 1988). The fate of bacterial production is uncer- tain. Bacteria are an important resource for the appendicularian Oikopleura dioica, the chrysophyte Dinobryon spp., and a variety of ciliates as determined by direct mea- surements of feeding on bacteria relative to 1Current address: Chesapeake Biological Lab, Uni- versity of Maryland, Box 38, Solomons 20688. Acknowledgments We thank B. Peierls, D. Lints, E. Funke, N. Under- wood, and M. Holland for help in the lab and field. The help of A. Vasconcelos with aspects of the minicell methodology is acknowledged. Mr. and Mrs. C. Wood provided access to Upton Lake. S. Baines, H. Cyr, B. Riemann, D. Scavia, and an anonymous reviewer pro- vided criticisms of the manuscript. Our work was supported by the Mary Flagler Cary Charitable Trust and NSF grant BSR88-05893. This paper is a contribution to the program of the Institute of Ecosystem Studies, the New York Botanical Garden. estimates of consumer energetic demands (Kingetal. 1980;BirdandKalff1987,1989; Sherr and Sherr 1987). In contrast, crusta- cean zooplankton do not feed or grow effi- ciently on bacteria (see McManus and Fuhr- man 1988). Early food-web models that included bac- teria suggested that bacterial production was efficiently funneled to higher consumers (Pace et al. 1984; Fasham 1985). On the other hand, a direct experimental test of this idea by Ducklow et al. (1986) revealed that very little of the organic C incorporated by bacteria is passed up the food web. Recent theoretical analyses and reviews also sug- gest that bacteria are not a major source of C to higher consumers. Rather, the proto- zoans and microzooplankton which con- sume a combination of bacteria, cyanobac- teria, and eucaryotic algae represent a key linkage to higher trophic levels (Sherr et al. 1986; Vezina and Platt 1988; Sherr and Sherr 1988). Although the latter view is compelling, few direct simultaneous mea- surements of grazing on bacteria by the var- ious potential consumers in the pelagic zone have actually been made. Planktonic community structure may de- termine the pathway and degree of utiliza- tion of bacterial production by higher con- sumers. Bacteria are grazed by a wide variety 795

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Page 1: Limnol. Oceanogr., 35(4), 1990, 7954308 Q 1990, by the ...€¦ · depth intervals with a Yellow Springs In- strument 57 meter. Upton Lake is covered with ice for -3 months. Thermal

Limnol. Oceanogr., 35(4), 1990, 7954308 Q 1990, by the American Society of Limnology and Oceanography, IIIC.

Planktonic community structure determines the fate of bacterial production in a temperate lake

Michael L. Pace, George B. McManus, 1 and Stuart E. G. Findlay Institute of Ecosystem Studies, New York Botanical Garden, Box AB, Millbrook 12545

Abstract

We examined the fate of planktonic bacterial production and the balance between bacterial growth and grazing mortality in the surface waters of Upton Lake, New York. Growth rates were measured by the incorporation of t3H]thymidine into DNA. Grazing rates on bacteria were de- termined with small cells produced by a mutant strain ofEscherichia coli and made either fluorescent or radioactive to monitor feeding. Bacterial community turnover times calculated from either growth or grazing rates ranged from 1.5 to 16 d. On the basis of these data and results from 29 other studies, most bacterial communities appear to have turnover times substantially > 1 d. Our measurements of feeding rates on bacteria frequently exceeded estimates of growth. Limitations of precision and doubts about the accuracy of methods make attempts to balance measurements of bacterial growth and grazing with current techniques unrealistic. The fate of bacterial production depends on planktonic community structure. Flagellates were the primary consumers of bacteria in winter and fall. At other times, Daphnia galeata consumed most of the bacterial production. Ciliates and rotifers were never important bacterial grazers. In Upton Lake large populations of Daphnia effectively “break” the microbial loop and funnel bacterial production to higher con- sumers.

In the plankton of most aquatic ecosys- tems, bacterial production is -30% of pri- mary production on an areal basis (Cole et al. 1988). If we assume growth efficiencies of lo-50% (Pomeroy and Wiebe 1988), planktonic bacteria process more than half of the organic C produced in aquatic sys- tems. Furthermore, these organisms either recycle or sequester substantial quantities of nutrients depending on nutrient conditions and trophic interactions (Caron et al. 1988).

The fate of bacterial production is uncer- tain. Bacteria are an important resource for the appendicularian Oikopleura dioica, the chrysophyte Dinobryon spp., and a variety of ciliates as determined by direct mea- surements of feeding on bacteria relative to

1 Current address: Chesapeake Biological Lab, Uni- versity of Maryland, Box 38, Solomons 20688.

Acknowledgments We thank B. Peierls, D. Lints, E. Funke, N. Under-

wood, and M. Holland for help in the lab and field. The help of A. Vasconcelos with aspects of the minicell methodology is acknowledged. Mr. and Mrs. C. Wood provided access to Upton Lake. S. Baines, H. Cyr, B. Riemann, D. Scavia, and an anonymous reviewer pro- vided criticisms of the manuscript.

Our work was supported by the Mary Flagler Cary Charitable Trust and NSF grant BSR88-05893.

This paper is a contribution to the program of the Institute of Ecosystem Studies, the New York Botanical Garden.

estimates of consumer energetic demands (Kingetal. 1980;BirdandKalff1987,1989; Sherr and Sherr 1987). In contrast, crusta- cean zooplankton do not feed or grow effi- ciently on bacteria (see McManus and Fuhr- man 1988).

Early food-web models that included bac- teria suggested that bacterial production was efficiently funneled to higher consumers (Pace et al. 1984; Fasham 1985). On the other hand, a direct experimental test of this idea by Ducklow et al. (1986) revealed that very little of the organic C incorporated by bacteria is passed up the food web. Recent theoretical analyses and reviews also sug- gest that bacteria are not a major source of C to higher consumers. Rather, the proto- zoans and microzooplankton which con- sume a combination of bacteria, cyanobac- teria, and eucaryotic algae represent a key linkage to higher trophic levels (Sherr et al. 1986; Vezina and Platt 1988; Sherr and Sherr 1988). Although the latter view is compelling, few direct simultaneous mea- surements of grazing on bacteria by the var- ious potential consumers in the pelagic zone have actually been made.

Planktonic community structure may de- termine the pathway and degree of utiliza- tion of bacterial production by higher con- sumers. Bacteria are grazed by a wide variety

795

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796 Pace et al.

of protozoans and metazoans, including mixotrophic algae, heterotrophic flagellates, ciliates, microzooplankton, and macrozoo- plankton (see Pace 1988; McManus and Fuhrman 1988). The relative abundance of these consumers varies dramatically among systems and seasonally within a system. If bacteria are grazed primarily by other mi- crobes, then relatively little bacterial pro- duction will be transferred to higher con- sumers because of respiratory losses at each trophic step. On the other hand, direct pre- dation on bacteria by microzooplankton and macrozooplankton could funnel a signifi- cant fraction of bacterial production up the food web.

Here, we report measurements of bacte- rial growth and grazing on bacteria made in a series of experiments in a small, temperate lake. One purpose of our study was to assess the effect of community structure by mea- suring grazing on bacteria by both meta- zoans and protozoans under various com- munity configurations. Determination of the major grazers allows us to assess the fate of bacterial production. In addition, simulta- neous measurements of bacterial abun- dance and production allow us to assess the balance between bacterial growth and graz- ing to provide independent estimates of the turnover time of bacterial communities.

Methods Study site description and routine obser-

vations- Our study was carried out in Up- ton Lake, a small (18 ha) eutrophic system located in Dutchess County, New York. At a central station, weekly measurements of temperature and oxygen were made at l-m depth intervals with a Yellow Springs In- strument 57 meter. Upton Lake is covered with ice for -3 months. Thermal stratifi- cation developed rapidly in concert with ice- out and was maintained until late Novem- ber. Throughout the year, bottom waters were either anoxic or contained < 1 mg O2 liter- l.

Triplicate water samples were taken weekly from 2 m for estimates of chloro- phyll and bacterial abundance. On the basis of previous profiles, these samples were rep- resentative of mixed-layer conditions. Sam- ples for chlorophyll were filtered through a

GF/F filter, frozen, and subsequently ex- tracted in methanol. Chlorophyll was de- termined fluorometrically with corrections for pheopigments (Parsons et al. 1984). Bac- terial abundance was determined by staining 0.5-ml subsamples with DAPI (4,6-diamin- dino-2-phenylindole) at a concentration of 5 pg ml-l, otherwise following Porter and Feig (1980).

Experimental procedures-Five experi- ments were conducted at different times in 198 8 to represent different planktonic com- munity configurations. An important fea- ture of our study was the replication of all measures. A second important feature was that experiments were conducted during the day and at night on four of the five occa- sions. Crustacean zooplankton feeding in lake surface waters varies dramatically on a diel cycle because of vertical migration and increased feeding at night (Haney 198 5). It has also been suggested that bacterial growth or protozoan grazing may vary sys- tematically over 24 h (Hagstrom and Lars- son 1984; Fuhrman et al. 1985; Wikner et al. 1990). Our day and night measurements allowed us to assess this diel variation in growth and feeding rates.

On each occasion we collected triplicate water samples from 2-m depth to measure chlorophyll, bacterial abundance, bacterial growth, grazing on bacteria, and the abun- dance of protozoans and metazoans. Water was collected by pooling several van Dorn samples into three separate 8-liter buckets. Buckets were returned to the lab and sub- sampled for chlorophyll and bacterial abun- dance as noted above. Abundances of het- erotrophic and mixotrophic flagellates were determined in glutaraldehyde-preserved samples examined by epifluorescence mi- croscopy (Haas 1982). A loo-ml sample from each bucket was preserved,by adding 1 ml of Lugol’s solution. Ciliates were later enumerated by settling a 1 O-25-ml subsam- ple and scanning the entire subsample at 200 x with an inverted microscope. Micro- zooplankton were concentrated by passing 1 liter of water through a 3 5-pm sieve. These samples were preserved in a sucrose-For- malin solution and subsequently counted with an inverted microscope at 100 X mag- nification. Triplicate samples of macrozoo-

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Fate of bacteria 797

plankton were taken with a pump described by Pace (1986). The outlet hose of the pump was passed through a 73-pm net. Samples were preserved in a sucrose-Formalin so- lution and enumerated with a stereomicro- scope at 25 x magnification.

Bacterial production -We measured bac- terial production with the C3H]thymidine method following the protocol of Findlay et al. (1984). Preliminary evaluations indicat- ed that, based on three experiments con- ducted in 1987,25-50 nM of thymidine was sufficient to saturate incorporation and that uptake of [3H]thymidine into DNA was lin- ear for at least 2 h. Isotopic dilution was estimated following the procedure of Find- lay et al. (1984) on a single occasion and was at most twofold.

During each experiment, we took six rep- licate lo-ml subsamples from each of three buckets (total, 18) and added 40 PCi of methyl [3H]thymidine (sp act-80 Ci mmol-l). Two of the six replicates were im- mediately killed by adding 2 ml of 5% For- malin to control for nonbiological absorp- tion of the radiolabel. Samples were incubated for 1 h. Incorporation of [3H]- thymidine was stopped by adding 2 ml of 5% Formalin. Samples were filtered on 47- mm, 0.2-pm polycarbonate filters and washed with ice-cold 5% trichloroacetic acid (TCA). Filters were frozen and subsequently extracted to isolate DNA following Findlay et al. (1984). Bacterial production was cal- culated from the radioactivity incorporated into DNA and a conversion factor of 2 x 1 018 cells produced per mole of thymidine incorporated (Fuhrman and Azam 1982; Moriarty 1986; Riemann et al. 1987). We checked our conversion factor (2 x 1 Ols) on one occasion by comparing bacterial growth in a dilution culture of lake water with thy- midine incorporation into DNA. This di- lution experiment was conducted in Feb- ruary 1988 over 46 h at lake water temperature (4°C). The factor 2 x lOI cells produced per mole thymidine incorporated gave good agreement between actual growth rates based on bacterial counts and thymi- dine incorporation converted to cell in- creases.

Minicell preparation-We used a modi- fication of the method of Wikner et al. (1986)

to measure grazing on bacteria. This tech- nique exploits mutant strains of Escherichia coli, which divide to produce a small cell containing no DNA and a normal cell with a full complement of DNA. The small, agenomic cells are called minicells. They have the desirable properties of being both similar in size to most planktonic bacteria (0.6-0.7 pm) and incapable of cell division.

The minicell-producing strain X- 148 8 was obtained from the E. coli Genetic Stock Center, Yale University, and maintained on agar plates. In order to produce and isolate large numbers of minicells, we grew E. coli cultures overnight in Luria Bertani medium (Maniatis et al. 1982). Minicells were iso- lated from larger cells by sucrose-gradient centrifugation. Initially, the overnight cul- ture was centrifuged in a Sorvall RCB-2 cen- trifuge with a GCA-fixed rotor at 2,000 rpm for 5 ‘min to remove debris and some large cells. The supernatant containing a mixture of minicells and larger cells was then sedi- mented by centrifugation at 6,000 rpm for 20 min. The pellet was resuspended in 2-3 ml of buffered gelatin saline (BSG-0.85% NaCl, 0.03% KH2P04, 0.06% Na,HPO,, and 100 pg of gelatin ml-l).

Cells were gently layered over 30 ml of sterile 5-20% (wt/vol) sucrose gradients and centrifuged at 4,000 rpm for 15 min in the centrifuge with an HS-4, swinging-bucket rotor. Bands of purified minicells were re- moved from the sucrose gradients, pelleted by centrifugation at 6,000 rpm for 20 min, and resuspended in BSG. The gradient cen- trifugation was repeated. Final concentra- tions of minicells were 1 Og-1 010 cells ml-l, and those of large cells were on the order of 1 O5 cells ml-‘. The minicells are diluted 4- 5 orders of magnitude in the feeding exper- iments (see below), so the residual large cells are present in the experiments at negligible concentrations.

Minicells were made either fluorescent to follow ingestion by protozoans or radioac- tive to follow ingestion by metazoans. Flu- orescent minicells were produced by labeling with 5-(4,6-dichlorotriazin-2-yl) aminoflu- orescein (DTAF), following the method of Sherr et al. (1987). Cells were stored in the refrigerator for 24-48 h before use. Imme- diately before using minicells in grazing ex-

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798 Pace et al.

periments, suspensions were dispersed with a sonicator and subsamples counted with epifluorescence microscopy.

Radioactive minicells were produced by incubating cell suspensions in BSG with 250 ,uCi 13H]methionine (sp act - 80 Ci mmol-l) overnight at 37°C. To remove any large cells which may have grown in the overnight cul- tures, we layered minicells onto a sucrose gradient and separated them as described above. Radioactivity per cell was deter- mined by filtering 0.1 ml of the final mini- cell suspension on 0.2~pm polycarbonate fil- ters. Filters were washed twice with 2 ml of BSG to remove any unincorporated label, added to a scintillation vial, boiled for 1 h in 5% TCA, and radioassayed. Minicell con- centrations were determined via acridine orange direct counts (Hobbie et al. 1977). We observed that the specific activity of the minicells (dpm cell-l) was constant between day and night experiments, implying that the minicells were not catabolizing the label between experiments while stored in cold BSG.

Grazing measurements -Three types of grazing measurements were conducted in each experiment. Total consumption of bacteria by all members of the community was measured by following the disappear- ance of fluorescent minicells in l-liter sam- ples of lake water over 24 h. Grazing by heterotrophic flagellates, mixotrophs, and ciliates was measured by the ingestion of fluorescent minicells in 20-60-min experi- ments (depending on temperature). Grazing by macrozooplankton (>200 pm) and mi- crozooplankton (3 5-200 pm) was measured by the incorporation of radioactive mini- cells in 30-min experiments.

Disappearance of fluorescent minicells was determined by adding minicells to 1 -liter subsamples in Whirlpak bags at 10% of nat- ural bacterial concentrations. Controls were 0.2-pm-filtered lake water with added min- icells (March, April, July experiments) or glutaraldehyde-poisoned lake water (July, September, October experiments). Experi- ments were run in the dark at lake water temperature either by placing the bags in constant temperature incubators (lake water ~20°C) or coolers (> 20°C). Minicell con- centrations in initial, intermediate, and final

samples were determined by direct counts with epifluorescent microscopy. Initial tirne- course experiments revealed that declines in minicell concentration over 24 h were linear. In subsequent experiments we took only initial and final samples and, instead of using three replicates, duplicated each replicate for a total of six l-liter bags plus controls for each experiment. We did not observe significant changes in the concen- tration of minicells over 24 h in the controls. In the experimental containers, rates were determined either by linear regression in the time-course experiment or by difference be- tween initial and final values in the end- point experiments.

Ingestion of fluorescent minicells by pro- tozoans was determined following proce- dures developed by McManus and Fuhr- man (1986) and Pace and Bailiff (1987) for experiments with fluorescent particles. Sub- samples from the same bags used in the dis- appearance experiments were taken several times during the first hour of incubation. These samples were preserved with an equal volume of cold 4% glutaraldehyde, which minimizes particle losses from cells (San- ders et al. 1989; Bloem et al. 1989) and avoids the safety and precipitation prob- lems associated with the fixative containing acrolein, tannic acid, and glutaraldehyde recommended by Sieracki et al. (1987).

Ingestion of minicells by mixotrophic al- gae and heterotrophic flagellates was deter- mined by scanning several random strips on filters prepared as by Pace and Bailiff (1987) with an Olympus 60 x 11.40 S-Plan Apo objective (total magnification 750 x). We observed that some species of hetero- trophic flagellates (usually choanoflagel- lates) attached to algae and typically con- tained high numbers of minicells. These flagellates were often present at lower den- sities than unattached flagellates.

We counted the attached flagellates ac- cording to the type of algae to which they were attached (e.g. Fragilaria, Anabaena) by scanning the entire filter at lower mag- nification (300 x ) and shifting to a higher magnification to determine minicells per flagellate when these forms were encoun- tered. For each category of phagotroph (e.g. unattached heterotrophic flagellates, mixo-

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Fate of bacteria 799

trophs, Dinobryon, heterotrophic flagellates attached to Anabaena), clearance rates were calculated as

CR=I+Cx T (1)

where CR is the clearance rate in nl flagel- late-l h-l, I the minicells flagellate-‘, C the concentration of minicells nl-’ in the ex- perimental container, and T the incubation time (h). Community ingestion rates were calculated by multiplying CR for each cat- egory of phagotroph by the concentration of bacteria and summing across categories.

Ciliate ingestion of minicells was deter- mined in a manner similar to the flagellates. Subsamples were taken after 20-38 min of feeding and fixed with ice-cold glutaralde- hyde. Filters containing DAPI-stained cil- iates (Pace and Bailiff 198 7) were scanned at low power (300 x ), and ciliates encoun- tered were checked for ingestion of minicells at high power (7 50 x ). Ciliates were cate- gorized by major taxa as determined in pre- vious counts. Clearance rates for each taxon and for the entire community were calcu- lated. Because rates of feeding by ciliates on minicells were relatively low, we deter- mined clearance rates in only one. of the three replicates.

Experiments to measure feeding on ra- dioactive minicells were conducted in clear polycarbonate bottles containing 2 liters of lake water. One replicate was killed by add- ing 100 ml of 37% Formalin to produce a 2% final solution. Radioactive minicells were added to the bottles at 10% of natural bacterial concentrations. Bottles were mixed thoroughly, and duplicate 5-ml subsamples taken from each to measure the radioactiv- ity of the feeding suspension. These samples were filtered on 0.2~pm polycarbonate fil- ters and rinsed with distilled water; the fil- ters were then placed in a scintillation vial and frozen. At the end of a 30-min incu- bation, the entire 2-liter sample was filtered through a 200~pm sieve to collect macro- zooplankton; subsequently l-2 liters of the filtrate were passed through a 35-pm sieve to collect microzooplankton. Plankton were washed off these sieves and immediately concentrated on 8 .O-pm polycarbonate fil- ters. Each filter was rinsed thoroughly with

distilled water, placed in a scintillation vial, and frozen.

After completion of each paired day-night experiment, 1 ml of tissue solubilizer (NCS- Amersham) was added to the vials contain- ing 8.0~pm filters, and the sample digested for 24 h to dissolve the animals and the filters. To the vials containing 0.2~pm fil- ters, we added 1 ml of 5% TCA and boiled the samples for 30 min. All vials were sub- sequently radioassayed in a liquid scintil- lation counter. Community clearance rates were calculated for the > 200- and 35-200- pm size fractions with the equation

CCR=I+(SA x C) x V (2)

where CCR is the community clearance rate in liters h-l, I the radioactivity ingested by the size class, corrected for radioactivity ab- sorbed by the control (dpm liter-’ h-l), SA the specific activity of the minicells (dpm minicell- l), C the concentration of minicells in the experimental bottles (minicells li- ter-l), and V the volume of the experimental container (liters). Community ingestion rates were calculated by multiplying clearance rates by the concentration of bacteria.

Rotifers dominated the 35-200-pm size class (Table 1)-primarily the genera Poly- arthra and Keratella. Incorporation of ra- dioactivity by this size fraction was typically only two to three times, and sometimes less than or equal to, the radioactivity absorbed by the killed control. By contrast, radioac- tivity of the macrozooplankton (> 200 pm) was typically 10 times the radioactivity of the controls. The low radioactivity incor- porated by microzooplankton indicates these animals were not feeding on bacteria at significant rates. Thus, we present results only for the macrozooplankton.

Results Annual cycle of chlorophyll and bacte-

ria - Chlorophyll was relatively high in win- ter under the ice and increased with the spring bloom that occurred in concert with ice-out (Fig. 1 a). Following the spring bloom, chlorophyll declined and oscillated between 2 and 10 pg liter-l for the remainder of the year. A bloom of Dinobryon divergens was observed in October which led to a modest increase in chlorophyll in fall. Chlorophyll

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Fate of bacteria 801

I= a. Apr

‘; loo- b. Jul

r ‘i- loo- 1

= ao-- ‘i-

L aJ k 60--

.e .k! - - ul m 40--

= =

s 8 20-- CD co

z 10 0

O- *IT

Growth Macro Flagellate Growth Macro Flagellate

-i 40 t

c. Sep

I

‘i- 15

L Jz

Growth Macro Flagellate

d. Ott

Growth Macro Flagellate Fig. 2. Measurements of bacterial growth and feeding on bacteria by macrozooplankton (> 200 pm) and

flagellates including mixotrophs in four experiments in 1988. Solid bars represent night measurements and open bars day measurements for experiments conducted on 13-l 4 April (note log scale), 13-l 4 July, 2 l-22 September, and 26-27 October. All values are means + 1 SD.

2a). Strong day-night differences in the ma- crozooplankton grazing rates were due to diel vertical migrations by Daphnia (Table 1). Flagellate grazing rates were 10% (night) and 17% (day) of the macrozooplankton grazing rates. Overall, consumption of bac- teria was far greater than growth during the April experiment. It is likely that zooplank- ton, in particular Daphnia, were driving the sharp declines of both algae and bacteria observed in April (Fig. 1).

In the July experiment, growth and graz- ing were approximately balanced (Fig. 2b). Total bacterial consumption by macrozoo- plankton plus flagellates was twice bacterial production at night and half of bacterial production during the day. Bacterial pro- duction was slightly higher in July relative to April, whereas grazing rates were lower, reflecting the decline in Daphnia abundance between the two experiments (Table 1). As in April, macrozooplankton grazing was substantially higher than flagellate grazing

both at night and during the day. Bacteria were relatively stable in summer with cell densities oscillating between 4 and 6 x log cells liter-l (Fig. 1). During this period, bac- terial production and grazing were in bal- ance with the primary fate of bacterial pro- duction being direct ingestion by Daphnia.

Two experiments were conducted in fall when water temperatures were declining (Fig. 2c,d). Bacterial production was lower during these experiments relative to spring and summer conditions. Total consump- tion of bacteria by macrozooplankton and flagellates exceeded growth estimates by about twofold to fourfold in September and October. Flagellate grazing was of increased significance, especially in October when mean flagellate feeding rates were higher than macrozooplankton rates (Fig. 2d). The shift in rates reflects changes in the com- munity of bacterial consumers. In October, Daphnia densities were lower (Table 1) and D. divergens was abundant. Dinobryon is an

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802 Pace et al.

Table 2. Abundance and grazing rates of heterotrophic and mixotrophic flagellates. All data are means f 1 SD except in some cases of low abundance where data were pooled from replicates. Data from consecutive dates represent day (D) and night (N) samples.

1988 D/N Flagellate type Abundance (No. ml-l)

Ingestion (mini. flag.? h-l)

Clearance (nl flag.3 h-l)

3 Mar D 13 Apr N 14 Apr D 13 Jul N

14 Jul D

21 Sep N

22 Sep D

26 Ott N

27 Ott D

Free heterotrophic Free heterotrophic Free heterotrophic Free heterotrophic Attached to diatoms Attached to blue-greens Free heterotrophic Attached to diatoms Attached to blue-greens Free heterotrophic Attached to diatoms Attached to blue-greens Attached to Dinobryon Dinobryon Free heterotrophic Attached to diatoms Attached to blue-greens Attached to Dinobryon Dinobryon Free heterotrophic Attached to diatoms Attached to blue-greens Attached to Dinobryon Dinobryon Free heterotrophic Attached to diatoms Attached to blue-greens Attached to Dinobryon Dinobryon

761f56 502k30 371k61 711a164 15.4k9.5

3.23 461+203 16.7+ 15.7

5.55 759+49 15.2k3.8 71.Ok45.6

3.31k2.4 42.3k22.9

1,335+31 14.0k6.2 88.8k30.6

5.6k3.6 39.7k7.8 789k 122 7.5k2.4 1.8k2.9

57.6k37.5 2,159&380

991+141 5.9k 1.5 1.4k2.0

59.1k2.1 2,121+441

0.37kO.09 2.46f0.42 2.8 1 kO.49 1.56kO.32 2.42+ 1.50

11.1 1.69kO.51 1.82kO.93

9.09 1.54kO.33 4.17 f2.55 9.48+ 1.08 5.49k0.88 7.20+ 1.60 2.33kO.14 2.79Zk1.18 8.59+ 1.25

3.81 4.72f0.94 0.84f0.39 2.901ko.53

3.17 1.24

1.12kO.15 1.13k0.38 2.47f0.31

2.05 kO.93 0.87kO.27

0.6220.12 5.32kO.71 5.3820.95 1.38kO.26 2.13k1.31

9.86 1.8 1 kO.68 1.81kO.78

9.59 1.85kO.49 5.ooIk3.03 11.4k1.81 6.67+ 1.44 8.62k1.81 2.65kO.08 3.14+ 1.23 9.74f0.87

4.13 5.36kO.94 1.18kO.65 4.03 f. 1.05

4.28 1.71

1.54f0.17 1.60k0.69 3.4320.68

2.90+ 1.44 1.23kO.50

effective consumer of bacteria (Bird and Kalff 198 7) and was the principal bacterial grazer in the October experiment (Table 2).

To test the hypothesis that grazing or growth rates vary significantly on a diel cycle, we used a two-factor ANOVA for the four experiments shown in Fig. 2. Factors were experiments and day vs. night. Growth and flagellate grazing did not vary significantly between day and night (growth: F = 0.29, P= 0.39, n = 22; flagellate grazing: F = 0.31, P = 0.58, n = 24). As expected, ma- crozooplankton grazing was significantly dif- ferent between day and night (F = 26.27, P < 0.0001, n = 24), and we attribute this difference to vertical migration by Daphnia (Table 1).

Flagellate community composition and grazing- Free-living, nonpigmented flagel- lates (hereafter free-living heterotrophic fla- gellates) were typically the major protists consuming bacteria in Upton Lake. Den-

sities ranged from several hundred to > 1,000 cells ml-l, and clearance rates var- ied from 1 to 5 nl flagellate-’ h-l. The latter rates are somewhat lower than laboratory estimates of clearance rates for single species (Fenchel 1986a). These rates are, however, reasonable, particularly since the total com- munity is likely to contain species which either do not consume bacteria or feed on bacteria at relatively low rates. A second group of heterotrophic flagellates was found attached to several species of large algae in- cluding the diatom Fragilaria, the blue-green Anabaena, and the chrysophyte Dinobryon. Attached flagellates ingested minicells at high rates (Table 2). Clearance rates up to 11 nl flagellate-l h-l were observed, but these flagellates were never abundant (< 100 cells ml-l). Consequently, attached flagellates were of little significance in the overall fate of bacterial production. Dinobryon was an important bacterial consumer when this

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Fate of bacteria 803

- 0.5

r; E 0.4

a,

4

g 0.3

E

3 0.2

= 8 0.1 .-

.- s

0.0 L ll!-NL ill-

243 f 41

150 J

r; -c 125

‘; 100

ki .e 75 -

22 50 x5 0

co 25 0 - 0

N DNDNDND

APr Jul SeP act

Fig. 4. Comparison of direct measurements of feeding by macrozooplankton and flagellates (hatched) to total community measurements of feeding based on minicell disappearance (black) for the night (N) and day (D) measurements conducted in 1988. All values are means -+_ 1 SD.

SeP act

Fig. 3. Total community grazing rates measured by following the disappearance of minicells in four ex- periments in 19 8 8. Black bars- night measurements; white bars-day measurements. All values are means *l SD.

species reached high densities during a fall bloom (Table 2). Other mixotrophic Aagel- lates were rare and never significant grazers.

Ciliate community composition and graz- ing-Total ciliate grazing varied from 1.2 to 96 x lo4 bacteria liter-’ h-l with lowest rates in the October experiment and highest rates in July. These rates were typically < 10% of the total flagellate grazing (Fig. 2). The ciliate fauna of the surface waters con- sisted primarily of choreotrichs (Strombid- ium spp. and Halteria sp.) and haptorids (Mesodinium sp. and Askenesia sp.). Some species of choreotrichs ingested minicells, but clearance rates were low (range l-20 nl ciliate-’ h-l) relative to measurements made on similar species feeding on larger particles (Fenchel 1986b). Haptorids did not ingest minicells.

Total community grazing rate - Esti- mates of grazing by the entire planktonic community on bacteria were made by fol- lowing the disappearance of minicells over 24 h. No change was observed during the March experiment (data not shown) reflect- ing the relatively low grazing rate under the ice. Losses of minicells were observed at other times of the year, and specific daily loss rates were calculated from these changes (Fig. 3). Loss rates were typically in the range of 0.1-0.2 d-l except in July, when higher rates of 0.4 and 0.3 d-l were observed.

Total community grazing estimates should agree with the direct measures of feeding on bacteria by macrozooplankton and flagellates, since these two groups ac-

count for most of the grazing. There was good agreement between the two estimates only in the October experiments where t-tests revealed no significant differences (P > 0.1) between the estimates (Fig. 4). Poor- est agreement between the two methods was observed in April, when total grazing esti- mates were threefold to fourfold lower than the sum of zooplankton and flagellate graz- ing (Fig. 4). Differences between the esti- mates were highly significant for the night measurements (P = 0.004), but because of high variability in replicate total grazing es- timates (Fig. 4), differences were of lower significance for the day measurements (P = 0.07). In July, total community estimates were greater than the direct measures of feeding in the day (P = O-03), but there were no significant differences between night measurements (Fig. 4). Finally, direct graz- ing estimates were significantly greater than total community measurements in Septem- ber (night: P = 0.06; day: P = 0.04).

Comparison of turnover-Our estimates of bacterial growth, direct feeding on bac- teria by flagellates and macrozooplankton, and total community grazing rates can be compared in terms of turnover times by di- viding bacterial abundance by each rate es- timate. Turnover times as measured by three different techniques are all > 1 d (Table 3). Exceptionally slow turnover times of 50- 100 d were observed under the ice in March.

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804 Pace et al.

Table 3. Turnover times (in days) of bacteria in Upton Lake based on estimates of growth, grazing, and total mortality. -.

TOtal

1988 Growth Grazing mortality

3 Mar 55.9 90.9 - 13 Apr 11.4 1.5 5.9 14 Apr 9.2 3.0 9.1 13 Jul 6.8 3.4 2.5 14 Jul 6.1 12.7 3.7 21 Sep 14.7 3.8 7.0 22 Sep 15.9 4.0 7.0 26 Ott 16.3 4.4 6.1 27 Ott 13.3 6.2 5.5

More rapid turnover was observed in spring, summer, and fall experiments with most es- timates falling in the range of 3-15 d. In general, shorter turnover times were cal- culated based on grazing measurements than on measurements of growth.

Discussion Some of the discrepancy between the total

mortality and grazing estimates illustrated in Fig. 4 could be attributed to measure- ment error. In the minicell disappearance experiments we usually observed only a 1 O- 15% decline in minicells over 24 h. Such small declines are difficult to detect reliably because of the inherent variability associ- ated with direct microscopic counts. Mea- surements of minicell disappearance may not be sufficiently sensitive to accurately de- tect community rates of grazing on bacteria in systems where bacteria do not turn over rapidly. In addition, direct measurements of feeding were based on short-term esti- mates which minimize containment effects on the organisms. It may be problematic to compare these short-term estimates to those made over 24 h, given possible containment effects in these longer experiments and the diel rhythms of feeding by organisms like Daphnia (Haney 1985).

The fate of ingested minicells in the long- term experiments is unknown. Minicells which are ingested may be assimilated or pass through consumers and be egested. In the latter case, they will likely be compacted in fecal material as observed for fluorescent particles (Pace and Bailiff 1987), but some could redisperse and be counted, thus caus-

ing an underestimate of community grazing rate.

Previous studies have considered the re- lationship between bacterial growth and losses due to grazing and have inferred that growth and grazing are in close balance (McManus and Fuhrman 1988; Sanders et al. 1989; Bloem et al. 1989). On the other hand, Sherr et al. (1989) made simultaneous measurements of growth and protozoan grazing and found that growth estimates consistently exceeded grazing estimates in a Georgia estuary. Our study is among the first to attempt to measure feeding on bac- teria by all the major consumers including heterotrophic flagellates, mixotrophs, cil- iates, microzooplankton, and macrozoo- plankton. We found that growth rates were considerably lower than feeding rates when Daphnia was abundant. If we had measured feeding by microbial phagotrophs alone, we would have concluded that growth was ap- proximately balanced by flagellate grazing. In Upton Lake, however, feeding rates of macrozooplankton and flagellates com- bined were significantly greater (t-tests, P ( 0.1) than growth except in March and July experiments, when the two estimates were similar.

Differences between growth and grazing estimates were probably due to the uncer- tain accuracy of our methods, which makes comparisons among them difficult. The thy- midine method we used measures the in- corporation of radioactivity into DNA iso- lated by chemical extraction procedures. Previous evaluations of our chemical ex- traction suggest that our method of isolating DNA is > 90% efficient (Findlay et al. 1984; unpubl. data). There is uncertainty about converting estimates of radioactivity in DNA into measures of cells liter-’ h-l (Mor- iarty 1986). We attempted to verify our con- version with a dilution growth approach, which gave a value that agrees well with many previous estimates (Fuhrman and Azam 1982; Moriarty 1986), an extensive empirical study (Riemann et al. 1987), and ecosystem C budget constraints (Cole et al. 1989).

We also checked our method to be sure that we were using saturating quantities of the isotope and to examine the possibility

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Fate of bacteria 805

of isotope dilution by external pools of nu- cleic acid precursors. We saturated uptake, and isotope dilution appeared to be low. Nevertheless, some isotope dilution by competing external pools, internal de novo synthesis, and community variability in the ability to incorporate and utilize thymidine for DNA synthesis could easily change the thymidine-based estimates by a factor of two or more. Furthermore, recent studies suggest that the conversion factor varies in freshwater environments (Smits and Rie- mann 1988; Coveney and Wetzel 1988).

Similar concerns could be raised about the minicell method. We have verified in independent studies that flagellates, ciliates, and Daphnia consume minicells at expected rates. For mixed communities of con- sumers, we assume that the spherical mini- cells, which are 0.6-0.7 pm in diameter, ad- equately represent the diversity of bacteria in terms of size, shape, and taxonomy for all grazers. These assumptions are not en- tirely valid. For example, Glide (1988) ob- served that the size composition of bacteria in Lake Constance shifted, which presum- ably resulted from Daphnia grazing most intensely on larger bacteria and bacterial ag- gregates. In this context, our method may represent a conservative estimate of graz- ing.

Both the thymidine and minicell meth- ods, however, are among the best tech- niques now available to measure bacterial processes. Given current uncertainties about accuracy, it is probably unrealistic to ask whether bacterial production and grazing mortality are in balance. Rather, diverse methods help constrain the possible range of bacterial activity and identify the major pathways of bacterial consumption.

Several studies in both marine and fresh- water systems have presented evidence for rapid turnover times (0.2-2 d) of bacterial communities based on thymidine incor- poration into macromolecular pools, cali- brated with dilution growth experiments (Kirchman et al. 1982; Ducklow and Hill 1985; Scavia and Laird 1987). Bacteria in Upton Lake do not turn over so rapidly. Our conclusion of slower turnover rates is based on three different approaches, includ- ing growth measurements, direct estimates

of grazing by several types of consumers, and disappearance rates of tracer bacteria.

While the studies cited above have argued that turnover is rapid, others support the view of slower turnover times. For example, Cole et al. (1988) summarized data from studies where both primary production and bacterial production were measured in units of pg C liter-l d- l. Using these data, we calculated bacterial turnover times for 29 cases where the thymidine method was used and bacterial abundance was available. We converted abundances into C with a factor of 20 fg C cell-l (Lee and Fuhrman 1987). Average turnover time was 4.5 d with a me- dian of 3.7 and a range of 0.5-14. Upton Lake turnover times fall within this range, except in winter. The literature data and the Upton Lake data are based on epilimnion communities only. Recent field studies in lakes also provide evidence for slow bac- terial turnover times in the epilimnion, metalimnion, and hypolimnion (Sanders et al. 1989; Bloem et al. 1989). We conclude that community turnover times of plank- tonic bacteria in Upton Lake and in most systems are considerably > 1 d.

A clear result of our study concerns the relative importance of various microbial phagotrophs as bacterial consumers. In Up- ton Lake free-living heterotrophic flagel- lates and mixotrophs such as Dinobryon ac- count for most Protist grazing. Ciliates were not important grazers nor were attached heterotrophic flagellates, although for the latter, per-cell grazing rates were high. The surface-water ciliates of the lake are typical of those found in the epilimnion of other lakes (Pace 1982), and we infer that epilim- netic ciliates are, in general, not important grazers of bacteria. Our results are very sim- ilar to those found by Sanders et al. (1989) for Lake Oglethorpe, Georgia, where graz- ing was measured with fluorescent micro- spheres. In that lake heterotrophic and niix- atrophic flagellates accounted for 68-90% of the bacterial ingestion, whereas ciliates accounted for a relatively low percentage.

Daphnia consumes most of the bacteria1 production in Upton Lake. Earlier studies have concluded that Daphnia, and meta- zoans in general, are relatively unimportant as bacterial consumers (see Pace 1988;

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806 Pace et al.

McManus and Fuhrman 1988; Sanders et al. 1989). Daphnia feeds on bacteria with a lower efficiency than it does on algae (Porter et al. 1983), and bacteria alone are a poor food for Daphnia (Pace et al. 1983). In sys- tems, however, where large populations of Daphnia develop, these cladocerans can consume a substantial portion of the bac- terial production as noted during seasonal Daphnia maxima in several lakes (Pedros- Alio and Brock 1983; Geertz-Hansen et al. 1987; Giide 1988) and in enclosure exper- iments when dense populations of Daphnia develop (Riemann 1985; Geertz-Hansen et al. 1987). Kankaala (1988) studied a Daph- nia Zongispina population that maintained high densities (5-326 animals liter-l) and found that these animals could graze 3-48% of bacterial biomass daily.

In Upton Lake, if we assume Daphnia accounts for all the feeding on bacteria by macrozooplankton, we obtain estimates of clearance rates ranging from 0.1 to 0.4 ml animal-l h-l, in good agreement with ex- pected rates based on earlier studies of daphnids (Peterson et al. 1978; Porter et al. 1983; B@sheim and Andersen 1987; Bern 1987; Kankaala 1988). The estimates of bacterial consumption by Daphnia are equivalent to or greater than our estimates of bacterial production for the April through October experiments.

Grazing by Daphnia is likely to be the predominant fate of bacterial production in lakes where daphnids are consistently abun- dant. In Upton Lake, Daphnia densities varied from - 10 to > 100 animals liter-’ excluding the sample taken when the lake was covered with ice. Densities in this range are not unusual, as demonstrated by McCauley et al. (1988) who summarized data on algal biomass and the abundance of Daphnia in 35 lakes worldwide. In 11 of those 35 lakes the average Daphnia density exceeded 10 animals liter-l. This average was based only on observations following the spring algal-zooplankton bloom and preceding winter decline. The averages, therefore, did not include high-density pe- riods such as we observed during the April bloom and which occur commonly in many lakes. In contrast, bacteria appear to be con- sumed primarily by flagellates in lakes with

low Daphnia densities (Riemann 1985). For example, Sanders et al. (1989) found het- erotrophic and mixotrophic flagellates to be the primary bacterial grazers in Lake Ogle- thorpe where cladocerans including Daph- nia are abundant only seasonally, with den- sities > 10 animals liter-l only briefly during spring or fall blooms.

Microbial food webs have recently been viewed as primarily regenerative in the sense that nutrients contained in picoplankton are rapidly turned over by the microbial pha- gotrophs that consume picoplankters (Pom- eroy and Wiebe 198 8). A correlate of this idea is that processes mediated by hetero- trophic bacteria are “loops” wherein matter cycles rapidly and is only passed up the food web by protozoan intermediaries. These concepts have been developed primarily in marine systems where the dominant zoo- plankton are copepods. Copepods cannot graze as effectively as Daphnia on small par- ticles-including in some cases the smallest heterotrophic flagellates. Daphnia, because of their broad feeding abilities, are able to “break” the microbial loop and directly consume both algae and a broad spectrum of heterotrophic microbes (Porter et al. 1979). Microbial food webs may differ be- tween systems with and without abundant populations of Daphnia (Stockner and Por- ter 1988).

We suggest that nutrient cycling and res- piration by heterotrophic microbes will be slower and the flow of C to higher trophic levels will be greater in systems with Daph- nia. In marine systems dominated by co- pepods and freshwater systems without Daphnia, heterotrophic microbes will dis- sipate more of the primary production in respiration, and the flow of C to higher trophic levels will be lower. This hypothesis requires comparative study of systems with and without Daphnia to fully quantify the interactions and assess the postulated sig- nificance of these organisms in controlling microbial heterotrophy. If correct, the hy- pothesis identifies a major difference be- tween the nature of pelagic food webs in freshwater and marine systems, although larvaceans, when abundant, may be the ma- rine analog of Daphnia.

In conclusion, the fate of bacterial pro-

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Fate of bacteria 807

duction in Upton Lake is largely a function of planktonic community structure. The three primary bacterial consumers in the surface mixed layer were Daphnia, Dinobry- on, and heterotrophic flagellates. Variations in the relative abundances of these con- sumers over the season influence how bac- terial production enters the food web. In winter and fall, flagellates and Dinobryon are the primary consumers of bacteria; in spring and summer, Daphnia are the pri- mary consumers. Factors determining the relative abundances of varying bacterial predators among lake ecosystems seem to be crucial in determining the pathways of bacterial utilization in pelagic food webs.

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Submitted: 24 August 1989 Accepted: 9 January 1990

Revised: 15 March 1990

2 al.