lab 1 qualitative tests 2-2-2014

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     Introduction

    • The food we consume is divided into three mainclasses:

    1.Carbohydrates: the body’s most readily availableenergy source.

    2.Lipids: the body’s principal energy reserve..!roteins: the body’s source of energy for growth

    and cellular maintenance.

    • !roteins also ma"e up the second largest portionof cells# after water.

    • !roteins consists of amino acid lin"ed together by

     peptide bond.

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    • $mino acids incorporated into proteins are covalently

    lin"ed by peptide bonds.

    • !eptide bonds are amide bonds formed between thecarbo%ylic acid group of one amino acid and the amino

    group of a second amino acid.

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    • &ote: each amino acids consists of:

    Carbo%ylic acid groups '(C))*+.

    $mino groups '(&*2+.,ubstituent# or replaceable.

    ,ide chains '(-+.

    • ifferent side

    chain result in

    various amino

    acid .

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    • The α carbon on all amino acids# e%cept glycine# is a

    chiral carbon  because it has four different groups

     bonded to it.• Glycine: is simple amino acid because - chain is *.

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    • Twenty different amino acids# which differ onlyin the structure of their side chains# are used byhuman cells to build proteins.

    • The side chain structure determines the class ofthe amino acid: non(polar# neutral# basic# or

    acidic.• *uman cells can synthesi/e most the aminoacids needed to build proteins. *owever# about10 amino acids# called essential amino acids 

    cannot be synthesi/ed by human cells and must be obtained from food.

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     Essential Amino Acids in Humans

    1. $rginine

    2. *istidine

    . soleucine

    . Leucine

    3. 4aline

    5. Lysine

    6. 7ethionine

    8. Threonine

    9. !henylalanine

    10. Tryptophan

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     Non-Essential Amino Acids in Humans

    1. $lanine

    2. $sparagine

    . $spartate

    . lutamate3. lutamine

    5. lycine

    6. !roline8. ,erine

    9. Cysteine

    10. Tyrosine

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    Chemical Reactions of Amino Acids and Protein

    Functional Groups

    • Certain functional groups in amino acids and

     proteins can react to produce characteristically

    colored products.

    • The color intensity of the product formed by a

     particular group varies among proteins in

     proportion to the number of reacting functional# or

    free# groups present.

    • n this part of e%periment# various color(producing

    reagents 'dyes+ will be used to ;ualitatively detect

    the presence of certain functional groups in amino

    acids and proteins.

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     E !"#$ %illon Reaction

    •  Principle: 7illontyrosine?

    •  Purpose: To detect the amino acid that have phenol group oftyrosin.

     Note: some proteins containing tyrosine will initially form a

    white precipitate that turns red when heated# while others forma red solution immediately. &ote that any compound with a

     phenol group will yield a positive test# so one should be certain

    that the sample being tested does not contain any phenols other

    than those present in tyrosine.

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     E !$ 'anthoprotic Reaction

    • ,ome amino acids contain aromatic groups that are

    derivatives of ben/ene.

    • These aromatic groups can undergo reactions that are

    characteristic of ben/ene and its derivatives.

    • )ne such reaction is the nitration of a ben/ene ring with nitric

    acid.

    • The amino acids tyrosine and tryptophan contain activated

     ben/ene rings and readily undergo nitration.

    • The amino acid phenylalanine also contains a ben/ene ring#

     but the ring is not activated and therefore does not undergo

    readily nitration.

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    •  Principle: &itric acid gives color when heated

    with proteins containing tyrosine 'yellow color+

    or tryptophan 'orange color+B the color is due tonitration.

    •  Purpose: used to identify the presence of anactivated ben/ene ring.

     Note: f one spills a concentrated solution of nitric

    acid onto someone’s s"in. The proteins in s"in

    contain tyrosine and tryptophan# which become

    nitrated and turn yellow.

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     Procedure

    1. $dd 2 ml of protein solution in atest tube and add 2 drops of

    concentrated nitric acid.

    2. The formed white precipitate# willturn yellow upon heating# and

    finally will dissolve giving a

    yellow color to the solution.

    . Cool the solution down. Carefully

    add ml of 5 & &a)*. &ote that

    the yellow color turns orange.

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     E !(#$ Glyoylic Acid Reaction

    !Hop)ins-Col* test#:

    •  Principle: The indole ring reacts with glyo%ylic

    acid in the presence of a strong acid to form a

    violet cyclic product.

    •  Purpose: The *op"ins(Cole test is specific for

    tryptophan# the only amino acid containing indole

    group. .

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     Procedure:

    • $dd 1 ml of protein solution in a test tube# add 1 ml

    of *op"ins(Col reagent and mi% well.

    • ncline the test tube and slowly add 1 ml of

    concentrated *2,) on the inner wall of the test tube

    thus forming a reddish ( violet ring at the interface of

    the two layers.

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     Result :

    • $ reddish violet ring is

    formed at the Dunction

     between the 2 layers with

    albumin and casein.

    •  elatin gives negative

    results.

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     E !+#$ Reduced sulfur test !,est for !-H# .roup#

    •  Principle: !roteins containing sulfur 'li"e:

    7ethionine and cystine+ give a blac" deposit of

    lead sulfide '!b,+ when heated with lead acetatein al"aline medium.

    •  Purpose: To detect amino acid which containe

    sulfer group. 

    • Sulfur-containing protein ----> NaOH----> S2- ----Pb2+----> PbS

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     Procedure:

    1. $dd 1 ml of protein solution in a test tube# add 2 drops

    of 10E sodium hydro%ide solution and 2 drops 'or few+

    of lead acetate.

    2. ,topper the tubes and sha"e them. -emove the stoppers

    and heat in a boiling water bath for 3 minutes.

    . Cool and record the results.

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     Result :

    • $ blac" deposit is formed with albumin•  while a slight blac" turbidity is obtained with

    casein due to its lower content of sulfur.

    • elatin gives negative result.

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     E !/#$ a)a.uchi ,est for Ar.inine:

    •  Principle: F( naphthol and sodium

    hypobromite=chlorite react with the above mentioned

    compound to form red orange comple%es.

    •  Purpose: used for the detection of a specific type of

     protein with the amino acid containing the

    guanidinium group 'e.g. arginine+.

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     Procedure

    1. To 1 ml of the protein solution add 1 ml of & &a)* solution and 0.3 ml of 0.1 E F( naphtholsolution# and a few drops of 2 E hypobromitesolution.

    2. The presence of a guanidinium group in thecompound under e%amination will be confirmed

     by the formation of a red color.

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     Ninhydrin ,est 

    •  &inhydrin is a chemical used to detect free amino acidand proteins

    •  $mino acids'&*2+ also react with ninhydrin at p*G.

    • The reduction product obtained from ninhydrin thenreacts with &* and e%cess ninhydrin to yield a blue

    colored substance.

    • This reaction provides an e%tremely sensitive test for

    amino acids.

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     Procedure

    • To 1 mL solution add 3 drops of 0.3E ninhydrinesolution

    • Hoil over a water bath for 2 min.

    • $llow to cool and observe the blue color formed.

    • -esult: all amino acid will give purple or deep blue

    with e%ception !roline gives yellow not violet.

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