handbook of drug screening. volume 114. drugs and the pharmaceutical sciences edited by ramakrishna...

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Book Reviews Handbook of Drug Screening. Volume 114. Drugs and the Pharmaceutical Sciences. Edited by Ramakrishna Seethala and Rabhavathi B. Fernandes. Marcel Dekker, Inc., New York. 2001. xiii + 597 pp. 16 × 24 cm. ISBN 0-8247-0562-9. $195.00. The rapid development of high-throughput screening techniques during the 1990s has led to a new revolution in drug discovery. The PUBMED database (http:// www.ncbi.nlm.gov/entrez/query.fcgi) lists over 7000 ref- erences to “drug screening” or “high-throughput screen- ing”. The U.S. Patent and Trademark Office (http:// www.uspto.gov) records over 2800 patents or patent applications that mention these terms in their descrip- tion or specification sections. Barnes and Noble’s web site (http://www.bn.com) lists 47 books that have been published on drug screening methods, most of which have come out within the past 5 years. In addition, countless conferences occur throughout the year, having as their primary focus drug discovery and high- throughput technology. The Handbook of Drug Screen- ing provides an overview of all of the current assays, methods, strategies, and instrumentation used in drug discovery processes. The book is basic enough to allow the novice to understand the field while being suf- ficiently detailed to give experienced scientists critical information needed to incorporate new methods into their screening operations. The book contains 21 chapters that have been written by 44 contributors, including the editors. Chapter 1 begins with a concise overview of drug screening that documents its wide scope and utility. The rest of the book presents chapters that are logically grouped into sections that address all of the major aspects of the technology. Chapters 2-4 provide the foundation, with a description of screening targets, developing assay strategies, and a discussion of homogeneous detection technologies. Chapters 5-10 delve into greater detail on the different types of screens, including cell-based molecular genetic designs, receptor-based assays, func- tional screens, enzyme assays, and transcription activa- tion methods. This is followed by a chapter covering the screening techniques used to discover inhibitors of transcription factors. Chapter 12 focuses on screening for natural products having therapeutic utility, using combinatorial libraries created from genomic libraries originating from “uncul- tivatable” microbial sources. The techniques that allow systemic searching for drugs from previously inacces- sible bacterial natural products represent a fertile field for natural product discovery. Engineering these gene libraries through “shuffling” provides new unnatural products that have never before been available for drug investigation. Chapters 13 and 14 discuss high-throughput methods to assay absorption, metabolism, and toxicity. Pharma- ceutical and biotech companies want to assess ADME/ toxicology data as early in the drug discovery process as possible. The techniques used to evaluate a drug candidate’s potential effects in vivo using a high- throughput assay mode are important in rapidly elimi- nating compounds having adverse properties. Next, chapters 15-17 explore the conversion of the vast amount of genomic information to proteomic data from which new drug targets can be gleaned. The last of these chapters addresses the large databases avail- able in the fields of genomics, combinatorial chemistry, high-throughput screening, and clinical trials and ad- dresses how they can be mined to help the drug discovery process. The final five chapters address the practical aspects of setting up screening operations. The cost factors associated with high-throughput drug discovery are discussed in chapters 18 and 19. Some important parameters that affect cost are assay robustness, sen- sitivity, and automation. The last three chapters extend this theme into the miniaturization of screens to allow testing of more than 100 000 compounds per day. A review of the equipment and robotics necessary to accomplish this level of ultra-high-throughput is pre- sented. Chapter 20 then discusses new assay designs that incorporate homogeneous fluorescent technology to allow one-step assays, truly providing the ultimate in rapid testing. The last chapter reviews what could be the future of screening operations: nanotechnology that presents the possibility of detecting single-molecule interactions. The Handbook of Drug Discovery contains 1324 references extending through the year 2000, which are located at the end of their respective chapters. Most chapters are backed by recent literature citations, providing valuable detail that back up the methods reviewed in the text. The book is also liberally spattered with diagrams that illustrate the biochemical principles of each screening technique, as well as graphs and data from real-world drug discovery operations. The index section is adequate at 14 pages of primary and nested citations, but it could have been longer to make the book more convenient for the reader to locate particular information. A technical book containing 582 pages of text probably should have an index at least one- tenth that size to reflect thoroughly the terms used within it. Overall, this book is a worthwhile addition to the chemist’s bookshelf. Its practical methods are certain to make it a frequent reference for scientists involved in drug discovery. Greg T. Hermanson Director, Research and Development Pierce Chemical Company P.O. Box 117 3747 North Meridian Road Rockford, Illinois 61105 JM020185F 10.1021/jm020185f 2886 Journal of Medicinal Chemistry, 2002, Vol. 45, No. 13 Book Reviews

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Page 1: Handbook of Drug Screening. Volume 114. Drugs and the Pharmaceutical Sciences Edited by Ramakrishna Seethala and Rabhavathi B. Fernandes. Marcel Dekker, Inc., New York. 2001. xiii

Book Reviews

Handbook of Drug Screening. Volume 114. Drugsand the Pharmaceutical Sciences. Edited byRamakrishna Seethala and Rabhavathi B. Fernandes.Marcel Dekker, Inc., New York. 2001. xiii + 597 pp. 16× 24 cm. ISBN 0-8247-0562-9. $195.00.

The rapid development of high-throughput screeningtechniques during the 1990s has led to a new revolutionin drug discovery. The PUBMED database (http://www.ncbi.nlm.gov/entrez/query.fcgi) lists over 7000 ref-erences to “drug screening” or “high-throughput screen-ing”. The U.S. Patent and Trademark Office (http://www.uspto.gov) records over 2800 patents or patentapplications that mention these terms in their descrip-tion or specification sections. Barnes and Noble’s website (http://www.bn.com) lists 47 books that have beenpublished on drug screening methods, most of whichhave come out within the past 5 years. In addition,countless conferences occur throughout the year, havingas their primary focus drug discovery and high-throughput technology. The Handbook of Drug Screen-ing provides an overview of all of the current assays,methods, strategies, and instrumentation used in drugdiscovery processes. The book is basic enough to allowthe novice to understand the field while being suf-ficiently detailed to give experienced scientists criticalinformation needed to incorporate new methods intotheir screening operations.

The book contains 21 chapters that have been writtenby 44 contributors, including the editors. Chapter 1begins with a concise overview of drug screening thatdocuments its wide scope and utility. The rest of thebook presents chapters that are logically grouped intosections that address all of the major aspects of thetechnology. Chapters 2-4 provide the foundation, witha description of screening targets, developing assaystrategies, and a discussion of homogeneous detectiontechnologies. Chapters 5-10 delve into greater detailon the different types of screens, including cell-basedmolecular genetic designs, receptor-based assays, func-tional screens, enzyme assays, and transcription activa-tion methods. This is followed by a chapter covering thescreening techniques used to discover inhibitors oftranscription factors.

Chapter 12 focuses on screening for natural productshaving therapeutic utility, using combinatorial librariescreated from genomic libraries originating from “uncul-tivatable” microbial sources. The techniques that allowsystemic searching for drugs from previously inacces-sible bacterial natural products represent a fertile fieldfor natural product discovery. Engineering these genelibraries through “shuffling” provides new unnaturalproducts that have never before been available for druginvestigation.

Chapters 13 and 14 discuss high-throughput methodsto assay absorption, metabolism, and toxicity. Pharma-ceutical and biotech companies want to assess ADME/toxicology data as early in the drug discovery process

as possible. The techniques used to evaluate a drugcandidate’s potential effects in vivo using a high-throughput assay mode are important in rapidly elimi-nating compounds having adverse properties.

Next, chapters 15-17 explore the conversion of thevast amount of genomic information to proteomic datafrom which new drug targets can be gleaned. The lastof these chapters addresses the large databases avail-able in the fields of genomics, combinatorial chemistry,high-throughput screening, and clinical trials and ad-dresses how they can be mined to help the drugdiscovery process.

The final five chapters address the practical aspectsof setting up screening operations. The cost factorsassociated with high-throughput drug discovery arediscussed in chapters 18 and 19. Some importantparameters that affect cost are assay robustness, sen-sitivity, and automation. The last three chapters extendthis theme into the miniaturization of screens to allowtesting of more than 100 000 compounds per day. Areview of the equipment and robotics necessary toaccomplish this level of ultra-high-throughput is pre-sented. Chapter 20 then discusses new assay designsthat incorporate homogeneous fluorescent technology toallow one-step assays, truly providing the ultimate inrapid testing. The last chapter reviews what could bethe future of screening operations: nanotechnology thatpresents the possibility of detecting single-moleculeinteractions.

The Handbook of Drug Discovery contains 1324references extending through the year 2000, which arelocated at the end of their respective chapters. Mostchapters are backed by recent literature citations,providing valuable detail that back up the methodsreviewed in the text. The book is also liberally spatteredwith diagrams that illustrate the biochemical principlesof each screening technique, as well as graphs and datafrom real-world drug discovery operations.

The index section is adequate at 14 pages of primaryand nested citations, but it could have been longer tomake the book more convenient for the reader to locateparticular information. A technical book containing 582pages of text probably should have an index at least one-tenth that size to reflect thoroughly the terms usedwithin it. Overall, this book is a worthwhile addition tothe chemist’s bookshelf. Its practical methods arecertain to make it a frequent reference for scientistsinvolved in drug discovery.

Greg T. Hermanson

Director, Research and DevelopmentPierce Chemical Company

P.O. Box 1173747 North Meridian Road

Rockford, Illinois 61105

JM020185F

10.1021/jm020185f

2886 Journal of Medicinal Chemistry, 2002, Vol. 45, No. 13 Book Reviews