evaluation of cryopreserved bacmam transduced … · 1536-well suspension cell ... as ys over n ex...

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Results FLIPR TETRA® System with Aequorin Option and Frozen Bacmam Transduced Aequorin Cells: Cell Titration and CRC Assay Comparison of EC 50 Values Between 384- and 1536- Well Suspension Cell Aequorin Assays Figure 3a. 384-well suspension cell assay at 2,500 cells/well. Figure 3b. 1536-well suspension cell assay at 2,000 cells/well. Both yield similar agonist EC 50 values well within ½ log of the expected value. Change in EC 50 During Frozen Bacmam Aequorin Suspension Cell Assays Figure 4a. Reference compound EC 50 values during a 6 hour 100 plate screening assay. The cell suspension system filled and emptied the reservoir 100 times. 384-well dose response plates were run every 5 cycles. During the assay, EC 50 values remained within ½ log of expected value. Figure 4b. Compound A EC 50 values during a similar 1536-well 2.5 hour 30 plate assay. GSK Agonist CRC 2,500 cells/w ell [ Agonist] (nM) 0.1 1 10 100 1000 10000 Relative Light Units ((AUC)) 2000 4000 6000 8000 EC/IC50 = 371.3 Comparison of Z’ factor Over Time during Bacmam Aequorin Suspension Cell Assays Figure 5. Recording of whole plate Z’ factors during extended plate screening assays. A. 384-well plates contained 22 columns of EC 80 reference compound and 2 columns of negative controls. Average Z’ factor = 0.7. B. 1536-well plates contained 46 columns of EC 80 reference compound and 2 columns of negative controls. Average Z’ factor = 0.55. Change in Signal Over time during Aequorin Suspension Cell Assays Figure 6a. Change in RLU over time during 6 hour 384-well suspension cell experiment. Cells were added at 2,500/well. Figure 6b. Change in S:B ratio (auc) over time during 2.5 hour 1536-well suspension cell experiment. Cells were added at 2,000/well. Summary Cryopreserved Bacmam transduced Aequorin cell lines can be used to produce robust assay results in both 384-well and 1536-well formats on FLIPR TETRA ® instrument with Aequorin options. In both formats, EC 50 values remain within one half log of expected results and there is little reduction in signal intensity over time. Average Z’ = 0.7 in the 384-well 100 plate assay and average Z’ = 0.55 in the 1536-well assay. References 1. Wigglesworth, MJ, et. al., Use of Cryopreserved Cells for Enabling Greater Flexibility in Compound Profiling J Biomol Screen, Jun 2008; 13: 354 - 362. Abstract Cryopreserved cells as reagents in Aequorin based calcium flux assays decouples the tissue culture process from high throughput screening while improving overall assay performance 1 . The need for culturing cells in plates is eliminated. Combined with the FLIPR TETRA® system equipped with Aequorin options, cryopreserved cells are a powerful tool in the identification of lead compounds in drug discovery. The suspension cell distribution capability of the FLIPR TETRA® system enables uniform delivery of cells directly to read-plates for luminescent detection in up to 1536-well format. This study demonstrates performance of cryopreserved Bacmam transduced Aequorin cells in 384- well and 1536-well formats. Aequorin-based suspension assays with frozen cells demonstrate both instrument and cell performance during extended assays without significant shift in EC 50 or Z’ factor. Introduction Aequorin based calcium mobilization assays are highly compatible with cryopreserved cells when screening in suspension format. The FLIPR TETRA® system suspension cell option provides an effective method to perform Aequorin assays over an extended period of time enabling robust HTS. An enclosure surrounds the spinner flask to protect Coelenterazine loaded cells from light. Cells are pumped to the reservoir for pipetting during the assay and the remaining cells are returned to the cell flask to ensure an even cell suspension and consistent results during a six hour screening period. FLIPR TETRA® Cell System Suspension Option Figure 1. Cells are maintained in suspension in the external spinner flask until just prior to addition. At this time, cells are pumped into the user-installable cell reservoir located in source position 3 and then transferred to the read-plate using the system pipettor. About Cryopreserved Bacmam Transduced Aequorin Cells Cells were provided by GSK BRAD screening group, Stevenage, UK. Embryonic Kidney (HEK) cells, which stably express mitochondrial Aequorin, were cultured adherently and expanded into 6360cm 2 cell culture vessels. Cells were transduced to express the receptor of interest by the addition of Bacmam virus directly to the adherent cultures. Following a transduction period of 24 hours, cells were harvested and frozen to prepare 1 mL aliquots using standard GSK procedures. Evaluation of Cryopreserved Bacmam Transduced Aequorin Cells in 384- and 1536-Well Suspension Cell Assays Using the Aequorin Option for the FLIPR TETRA® System Carole Crittenden 1 , Parita Shah 2 , Stephen J. Brough 2 , Damon Finnigan 2 , and Kasia Paczyna 1 1 Molecular Devices, now part of MDS Analytical Technologies, Sunnyvale, California, USA, 2 GlaxoSmithKline, UK Materials 1. Thawing media: DMEM/F12 (Invitrogen Cat# 11039-021) supplemented with 10% fetal bovine serum 2. Base buffer: Hanks’ balanced salt solution without phenol red and sodium bicarbonate (Sigma Cat# H 8264 made up in sterile DI water, supplemented with 20 mM HEPES (Sigma Cat# H0887) and adjusted to pH 7.4 with NaOH. 3. Cell loading buffer: Base buffer supplemented with 0.1% Pluronic Acid F68 solution (Invitrogen Cat# 24040-032) and 0.1% BSA (Sigma Cat# A 3803) 4. Cell and compound diluent buffer: Base buffer with 0.1% Pluronic Acid F68 5. 500 M Coelenterazine h stock: (Invitrogen Cat# C-6780) diluted in 100% ethanol and stored at -20 o C protected from light Methods 1. Cells were gently thawed, washed and the concentration was adjusted to 2.5 x10 6 /mL in loading buffer 2. Coelenterazine h was added at a final concentration of 5 M and tubes were wrapped in foil to protect from light 3. Cells were loaded on a rotating mixer for 4-20 hours at room temperature (below 22 o C for optimum Coelenterazine loading) 4. One hour before assay, cells were removed from the rotator and the concentration was adjusted as follows: a. 384-well suspension cell assays were performed at 2,500 cells/well in 20 L b. 1536-well assays were performed at 2,000 cells/well in 3 L 5. Cells were placed in the spinner flask under the cover on the suspension cell platform of the FLIPR TETRA® and the stirring speed set to 7 (~60 RPM) for approximately 1 hour) 6. Read-plates were prepared with either an EC 70 dose of reference compound or a concentration response curve (CRC) of reference compound using the AquaMax ® DW4 dispenser 7. Plates were loaded onto the SynchroMax TM ET for FLIPR TETRA® system and cycled into the instrument over time. 8. The FLIPR TETRA® system added cells to the read-plate while detecting luminescent signal with the intensified camera option 2 . Figure 2. In a 384-well plate, cells were titrated against a CRC of target agonist. In this assay, cells were pre-plated in suspension prior to addition of compound. 10 -2 10 -1 10 0 10 1 10 2 10 3 10 4 0 4000 8000 12000 #Cells/Well EC 50 (nM) Z at EC 80 10,000 164 0.84 5,000 147 0.84 2,500 110 0.67 1,250 53 0.45 Expected EC 50 = 175 nM Viability >95% [Agonist] nM RLU(max-min) 384-Well Assay EC 50 Values 0 60 120 180 240 300 360 420 0 100 200 300 400 500 600 Time(min) Compound EC 50 , nM 1536-Well Assay EC 50 Values 0 25 50 75 100 125 150 0 100 200 300 400 500 600 Expected EC 50 = 175 nM Time (min) Compound EC 50 , nM 2000 GSK cells/well CRC#1 0 min ["GSK" A] (nM) 0.1 1 10 100 1000 10000 Relative Light Units 10000 20000 30000 EC/IC50 = 276.5 EC 50 = 371.3 nM Z at EC 80 = 0.74 EC 50 = 276.6 nM Z at EC 80 = 0.69 1536-Well Assay Z' Factors 0 40 80 120 160 0.00 0.25 0.50 0.75 1.00 Average Z' = 0.55 Time (min) Z' factor 384-Well Assay Z' Factors 0 60 120 180 240 300 360 420 0.00 0.25 0.50 0.75 1.00 Average Z' = 0.7 Time (min) Z' Factor 384-Well 6 Hour Assay Signal 0 60 120 180 240 300 360 420 0 1000 2000 3000 4000 5000 6000 Time (min) RLU (AUC) 1536-Well 2.5 hour S:B Ratio 0 25 50 75 100 125 150 0 2 4 6 8 10 12 14 Time (min) S:B ratio (AUC) Table 1. Recommended setup parameters for luminescence assays using FLIPR TETRA® intensified camera and cell suspension system. FLIPR TETRA Suspension Cell Aequorin Assay Parameters Excitation/Emission - - - - Source/Destination Cell reservoir Read plate Cell reservoir Read plate - - - - - - - - - - - 2. These assay methods are also described in the literature , e.g., in Boie et al., Eur. J. Pharmacology., 340(2-3):227-241 (1997), and in United States Patent 6,872,538 and European Patent 1,145,002. Users interested in the patented methods may wish to consult legal counsel in evaluating these patents. 3a. 3b. 4a. 4b. 5a. 5b. 6a. 6b.

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Page 1: Evaluation of Cryopreserved Bacmam Transduced … · 1536-well suspension cell ... as ys over n ex tended peri d f ime en ... Explore PDF to learn about the FLIPR TETRA suspension

Results

FLIPRTETRA® System with Aequorin Option and Frozen Bacmam Transduced Aequorin Cells: Cell

Titration and CRC Assay

Comparison of EC50 Values Between 384- and 1536- Well Suspension Cell Aequorin Assays

Figure 3a. 384-well suspension cell assay at 2,500 cells/well. Figure 3b. 1536-well suspension cell assay at 2,000 cells/well. Both yield similar agonist EC50 values well within ½ log of the expected value.

Change in EC50 During Frozen Bacmam Aequorin Suspension Cell Assays

Figure 4a. Reference compound EC50 values during a 6 hour 100 plate screening assay. The cell suspension system filled and emptied the reservoir 100 times. 384-well dose response plates were run every 5 cycles. During the assay, EC50 values remained within ½ log of expected value. Figure 4b. Compound A EC50 values during a similar 1536-well 2.5 hour 30 plate assay.

GSK Agonist CRC 2,500 cells/w ell

[ Agonist] (nM)0.1 1 10 100 1000 10000

Rel

ativ

e Li

ght U

nits

((AU

C))

2000

4000

6000

8000

EC/IC50 = 371.3

Comparison of Z’ factor Over Time during Bacmam Aequorin Suspension Cell Assays

Figure 5. Recording of whole plate Z’ factors during extended plate screening assays. A. 384-well plates contained 22 columns of EC80reference compound and 2 columns of negative controls. Average Z’ factor = 0.7. B. 1536-well plates contained 46 columns of EC80 reference compound and 2 columns of negative controls. Average Z’ factor = 0.55.

Change in Signal Over time during Aequorin Suspension Cell Assays

Figure 6a. Change in RLU over time during 6 hour 384-well suspension cell experiment. Cells were added at 2,500/well. Figure 6b. Change in S:B ratio (auc) over time during 2.5 hour 1536-well suspension cell experiment. Cells were added at 2,000/well.

Summary

Cryopreserved Bacmam transduced Aequorin cell lines can be used to produce robust assay results in both 384-well and 1536-well formats on FLIPRTETRA® instrument with Aequorin options. In both formats, EC50 values remain within one half log of expected results and there is little reduction in signal intensity over time. Average Z’ = 0.7 in the 384-well 100 plate assay and average Z’ = 0.55 in the 1536-well assay.

References1. Wigglesworth, MJ, et. al., Use of Cryopreserved Cells for Enabling Greater Flexibility in Compound Profiling J Biomol Screen, Jun 2008; 13: 354 - 362.

AbstractCryopreserved cells as reagents in Aequorin based calcium flux assays decouples the tissue culture process from high throughput screening while improving overall assay performance1. The need for culturing cells in plates is eliminated. Combined with the FLIPRTETRA® system equipped with Aequorin options, cryopreserved cells are a powerful tool in the identification of lead compounds in drug discovery. The suspension cell distribution capability of the FLIPRTETRA® system enables uniform delivery of cells directly to read-plates for luminescent detection in up to 1536-well format. This study demonstrates performance of cryopreserved Bacmam transduced Aequorin cells in 384- well and 1536-well formats. Aequorin-based suspension assays with frozen cells demonstrate both instrument and cell performance during extended assays without significant shift in EC50 or Z’ factor.

Introduction

Aequorin based calcium mobilization assays are highly compatible with cryopreserved cells when screening in suspension format. The FLIPRTETRA® system suspension cell option provides an effective method to perform Aequorin assays over an extended period of time enabling robust HTS. An enclosure surrounds the spinner flask to protect Coelenterazine loaded cells from light. Cells are pumped to the reservoir for pipetting during the assay and the remaining cells are returned to the cell flask to ensure an even cell suspension and consistent results during a six hour screening period.

FLIPRTETRA® Cell SystemSuspension Option

Figure 1. Cells are maintained in suspension in the external spinner flask until just prior to addition. At this time, cells are pumped into the user-installable cell reservoir located in source position 3 and then transferred to the read-plate using the system pipettor.

About Cryopreserved Bacmam Transduced Aequorin Cells

Cells were provided by GSK BRAD screening group, Stevenage, UK. Embryonic Kidney (HEK) cells, which stably express mitochondrial Aequorin, were cultured adherently and expanded into 6360cm2 cell culture vessels. Cells were transduced to express the receptor of interest by the addition of Bacmam virus directly to the adherent cultures. Following a transduction period of 24 hours, cells were harvested and frozen to prepare 1 mL aliquots using standard GSK procedures.

Evaluation of Cryopreserved Bacmam Transduced Aequorin Cells in 384- and 1536-WellSuspension Cell Assays Using the Aequorin Option for the FLIPRTETRA® System

Carole Crittenden1, Parita Shah2, Stephen J. Brough2, Damon Finnigan2, and Kasia Paczyna1

1Molecular Devices, now part of MDS Analytical Technologies, Sunnyvale, California, USA, 2GlaxoSmithKline, UK

Materials1. Thawing media: DMEM/F12 (Invitrogen Cat# 11039-021)

supplemented with 10% fetal bovine serum2. Base buffer: Hanks’ balanced salt solution without phenol

red and sodium bicarbonate (Sigma Cat# H 8264 made up in sterile DI water, supplemented with 20 mM HEPES (Sigma Cat# H0887) and adjusted to pH 7.4 with NaOH.

3. Cell loading buffer: Base buffer supplemented with 0.1% Pluronic Acid F68 solution (Invitrogen Cat# 24040-032) and 0.1% BSA (Sigma Cat# A 3803)

4. Cell and compound diluent buffer: Base buffer with 0.1% Pluronic Acid F68

5. 500 �M Coelenterazine h stock: (Invitrogen Cat# C-6780) diluted in 100% ethanol and stored at -20

oC protected from

light

Methods

1. Cells were gently thawed, washed and the concentration was adjusted to 2.5 x106/mL in loading buffer

2. Coelenterazine h was added at a final concentration of 5 �Mand tubes were wrapped in foil to protect from light

3. Cells were loaded on a rotating mixer for 4-20 hours at room temperature (below 22oC for optimum Coelenterazine loading)

4. One hour before assay, cells were removed from the rotator and the concentration was adjusted as follows:

a. 384-well suspension cell assays were performed at 2,500 cells/well in 20 �L

b. 1536-well assays were performed at 2,000 cells/well in 3 �L

5. Cells were placed in the spinner flask under the cover on the suspension cell platform of the FLIPRTETRA® and the stirring speed set to 7 (~60 RPM) for approximately 1 hour)

6. Read-plates were prepared with either an EC70 dose of reference compound or a concentration response curve (CRC) of reference compound using the AquaMax® DW4 dispenser

7. Plates were loaded onto the SynchroMaxTM ET for FLIPRTETRA® system and cycled into the instrument over time.

8. The FLIPRTETRA® system added cells to the read-plate while detecting luminescent signal with the intensified camera option2.

Figure 2. In a 384-well plate, cells were titrated against a CRC of target agonist. In this assay, cells were pre-plated in suspension prior to addition of compound.

10 -2 10 -1 10 0 10 1 10 2 10 3 10 4

0

4000

8000

12000#Cells/Well EC50 (nM) Z at EC80

10,000 164 0.845,000 147 0.842,500 110 0.671,250 53 0.45

Expected EC50 = 175 nM

Viability >95%

[Agonist] nM

RLU

(max

-min

)

384-Well Assay EC50 Values

0 60 120 180 240 300 360 4200

100

200

300

400

500

600

Time(min)

Com

poun

d EC

50, n

M

1536-Well Assay EC50 Values

0 25 50 75 100 125 1500

100

200

300

400

500

600

Expected EC50= 175 nM

Time (min)

Com

poun

d EC

50, n

M

2000 GSK cells/well CRC#1 0 min

["GSK" A] (nM)0.1 1 10 100 1000 10000

Rel

ativ

e Li

ght U

nits

10000

20000

30000

EC/IC50 = 276.5

EC50 = 371.3 nMZ at EC80 = 0.74

EC50 = 276.6 nMZ at EC80 = 0.69

1536-Well Assay Z' Factors

0 40 80 120 1600.00

0.25

0.50

0.75

1.00

Average Z' = 0.55

Time (min)

Z' fa

ctor

384-Well Assay Z' Factors

0 60 120 180 240 300 360 4200.00

0.25

0.50

0.75

1.00

Average Z' = 0.7

Time (min)

Z' F

acto

r

384-Well 6 Hour Assay Signal

0 60 120 180 240 300 360 4200

1000

2000

3000

4000

5000

6000

Time (min)

RLU

(AU

C)

1536-Well 2.5 hour S:B Ratio

0 25 50 75 100 125 1500

2

4

6

8

10

12

14

Time (min)

S:B

rat

io (A

UC

)

Table 1. Recommended setup parameters for luminescence assays using FLIPRTETRA® intensified camera and cell suspension system.

FLIPRTETRA Suspension Cell Aequorin Assay ParametersRead Mode Luminescence LuminescenceExcitation/Emission - -Camera Gain 280,000 280,000LED Excitation - -Exposure Time 0.53 sec 0.53 secGate Open 100% 100%Read Interval 1 sec 1 secReads Before Pipetting 5 5Reads During first Interval 90 90

Fluid Transfer Settings384-well 1536-well

Single Aspirate, Single dispense Aspirate Dispense Aspirate DispenseCell Reservoir Rotation Speed 6 6 6 6Source/Destination Cell reservoir Read plate Cell reservoir Read plateReservoir fill speed 5 - 5 -Reservoir fill source Cell flask - Cell flask -Reservoir drain speed 4 - 4 -Reservoir drain destination Cell flask - Cell flaskPipetting Volume 25 �L 25 �L 2 or 3 �L 2 or 3��LPipetting Height 70 �L 10 �L 35 �L 0.5��LPipetting Speed 20 �L/sec 50 �L/sec 5 �L/sec 8 �L/secTip removal speed 10 mm/sec 10 mm/sec 10 mm/sec 10 mm/secHold/Expel volume* 0 0 0 0Pause in Well - 0 - 0Mix After dispense - None - None* Using a hold/expel volume will cause an airgap resulting in a false luminescent signal

2. These assay methods are also described in the literature , e.g., in Boie et al., Eur. J. Pharmacology., 340(2-3):227-241 (1997), and in United States Patent 6,872,538 and European Patent 1,145,002. Users interested in the patented methods may wish to consult legal counsel in evaluating these patents.

3a. 3b.

4a. 4b.

5a. 5b.

6a. 6b.