energetic analysis of 24 c20 isomers
TRANSCRIPT
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Energetic analysis of 24 C20 isomers
Cody Allison, Kyle A. Beran*
Department of Science and Mathematics, The University of Texas of the Permian Basin, 4901 E. University Blvd., Odessa, TX 79762, USA
Received 24 February 2004; revised 28 April 2004; accepted 28 April 2004
Abstract
Twenty-four individual geometric structures of the 20-carbon system are investigated using hybrid Hartree–Fock/density functional
theory (DFT-B3LYP) in combination with the 6-31G and 6-311G* basis sets. These computations are carried out in order to evaluate the
relative energies of the various C20 isomers utilizing both geometry optimization and single-point energy calculations. The relative energies
of the three most widely studied C20 isomers (ring, bowl, and cage) are compared to the energies of other cyclic, bowl-like, and miscellaneous
isomers. Although the ring and the bowl isomers are predicted to be the two most stable species, we have identified three to four additional
cyclic structures that are predicted to be energetically competitive with the fullerene structure.
q 2004 Elsevier B.V. All rights reserved.
Keywords: C20; Isomers; Fullerenes; DFT calculations; Geometry optimizations; Potential energy; Relative energy
1. Introduction
It has only been in recent years that the C20 caged-
fullerene, the smallest and least stable of this class of
molecules, has been identified experimentally. Prinzbach
et al. [1] reported in 2000 the preparation of the fullerene
cage from brominated dodecahedrane in the gas phase using
mass-selective anion photoelectron spectroscopy. The
vibrational spectrum and electron affinity of the caged
structure was compared to the spectra of the bowl, which
was obtained from brominated corannulene, and ring [2]
isomers. In the following year, Wang et al. [3] reported the
synthesis of solid crystals of the cage isomer by irradiating
samples of ultra-high molecular weight polyethylene
(UHMWPE), which are indirectly cooled in liquid nitrogen,
with an Arþ beam. In spite of the historical difficulties
associated with the experimental synthesis of the cage
structure of the 20-carbon fullerene, theoretical studies on
this system have been extensive ever since Kroto [4] first
proposed its existence in 1987.
In addition to theoretical studies on the electronic and
vibrational properties [5,6] of C20 and its ions, theoretical
studies on narrow nanotubes (5 A diameters) have proposed
that C20 fragments may be responsible for capping these
slender tubes [7]. The theoretical studies on the tubes were
based on the experimental production of very narrow carbon
nanotubes that possess diameters on the order of 4–5 A
[8,9]. There has also been a considerable amount of
computational time devoted to analyzing the relative energy
of isomers in the 20-carbon system [10–18]. Primarily, the
focus of these studies has been directed toward the ring,
bowl, and cage structures. According to the literature, it has
been difficult to identify the most stable isomer due to the
variation of relative stabilities of the structures as a function
of the theoretical model applied. This uncertainty has been
attributed to the structural diversity and chemical unsatura-
tion, which yields contributions from both the static and
dynamic electron correlation effects. However, Grimme
et al. [10] have recently employed the most accurate
theoretical methods to determine that, within experimental
uncertainty, the bowl and the cage isomers are isoenergetic
with the ring approximately 2.0 eV higher in energy.
Regardless of these findings, there is very little mention in
the literature [2,14,16] of other possible stable isomers that
may compete with the energetic stability of the ring, bowl,
and cage structures.
Our previous studies on the C20 system [19–21]
focused on the construction of the potential energy surface
that exists around the ring, bowl, and cage isomers.
During the course of analyzing the output generated from
0166-1280/$ - see front matter q 2004 Elsevier B.V. All rights reserved.
doi:10.1016/j.theochem.2004.04.042
Journal of Molecular Structure (Theochem) 680 (2004) 59–63
www.elsevier.com/locate/theochem
* Corresponding author. Tel.: þ1-432-552-2238; fax: þ1-432-552-2236.
E-mail address: [email protected] (K.A. Beran).
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saddle-point calculations between the three primary
isomers, we have located and identified over 40 additional
20-carbon isomers, each of which is predicted to occupy
an energy minimum. Consequently, the research presented
in this paper goes beyond the theoretical investigation of
simply the ring, bowl, and cage isomers by considering 21
additional structures. These isomers were chosen amongst
the 40 þ isomers based upon their respective heats of
formation ðDHfÞ that we had determined using the semi-
empirical PM3 model. Five of the isomers were con-
structed via the pencil-on-paper method and incorporated
into this research based on their near bowl-like, or near
sheet-like structure, each of which has a central six-
membered ring.
2. Experimental method
Geometry optimizations and single-point energy calcu-
lations were conducted using the Spartan ’02 Windows [22]
software package running on a Dell Precision 450 Work-
station. Using the Cartesian coordinates obtained in our
previous work, the 24 isomers, see Fig. 1, were geome-
trically optimized using the split-valence 6-31G [23] basis
set with the B3LYP functional [24] for the purpose of
analyzing the relative energies of these isomers in terms of
density functional theory. These optimizations were carried
out without any symmetry constraints in order to locate the
local minimum for each isomeric structure. Vibrational
analysis of the 24 isomers was also conducted.
Fig. 1. The 24 isomers of C20 that are theoretically investigated. To save space, the molecules pictured do not accurately depict theoretically calculated
molecular volumes.
C. Allison, K.A. Beran / Journal of Molecular Structure (Theochem) 680 (2004) 59–6360
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The eight isomers with the lowest energy were
subsequently subjected to full geometry optimization
using the B3LYP functional with the 6-311G* basis set.
As with the 6-31G optimization process, analysis of the
vibrational frequencies (B3LYP/6-311G*) were performed.
This theoretical method was chosen for comparison with
Ref. [15]. Based on these optimized geometries, single-
point energies were determined for the eight chosen isomers
using DFT (B3LYP/6-311G*//B3LYP/6-311G*).
3. Results and discussion
The 21 isomers that were incorporated into this study, in
addition to the ring, bowl, and cage isomers, have been
categorized into five groups. Besides the group consisting of
the three primary isomers, which have been studied
extensively, the cycloadducts all exhibit ring-like charac-
teristics either in two- or three-dimensional space, of which
only the bowtie isomer has been reported previously [2,14].
The five additional bowls provided an internal comparative
study to the more well-known bowl structure, with its five-
member central ring structure and C5v symmetry. Of the five
new bowl structures, only c20-6om is optimized to a planar
geometry and, therefore, is representative of a carbon sheet.
The c20-5m isomer is a near-planar bowl possessing an
approximate curvature of 10–158, whereas the other three
bowls possess a much larger curvature (30–408). The cage
isomer with C2v symmetry (cage-c2v) isomer was also
included for an energetic comparison to the D2h symmetri-
cal version of the cage isomer. The bowl-like derivatives
(Group IV) are all representative of the atomic rearrange-
ment of the bowl isomer due to the breaking of bonds
between the central pentagon and the external hexagons.
The bowl-loop8 isomer was previously generated by a
genetic algorithm developed by Deaven and Ho [16]. The
other four derivatives were observed during our previous
studies. The three miscellaneous isomers were included
simply due to their unique structural appearance. These 24
isomers represent approximately one-half of all the C20
isomers that we have located and identified through our
semi-empirical studies.
Total geometry optimizations of the 24 isomers were
carried out by implementing the B3LYP/6-31G model and
are tabulated in descending order in Table 1, along with
their respective point groups and multiplicity. A consider-
able amount of time and energy has been directed toward
determining the relative energies of the three primary
isomers, with the assumption being that these three
structures occupy the three lowest-energy potential minima.
While our work predicts that the ring and bowl isomers
occupy the two lowest energy minima, the cage (D2h)
isomer is not the next in line.
We propose that there may be four additional isomers
that possess a relative energy that is comparable to that of
the cage (D2h) isomer. Consequently, there are five cyclic
isomers, including the ring, that lie lower in energy than the
cage (D2h) isomer. This is entirely consistent with
arguments that support the ring structure being lower in
energy due to the larger total entropy that is associated with
the ‘floppier’ structures. Excluding the ring isomer, the
three-dimensional cyclic structure of 3-6loop isomer is
lower in energy by ,0.4 eV in relation to the planar and
isoenergetic bowtie and halfbow isomers. Even though
2-6loop-tri has a unique carbon triangle, suggesting a large
ring strain, it is still predicted to be lower in energy than the
fullerene structure.
Vibrational analysis of the 24 isomers indicates that all
occupy local minima (all frequencies .0), except for the
cage (D2h) isomer that has one imaginary frequency
(2199i cm21). The fullerene isomer was re-built and
optimized without any symmetry constraints. The resulting
structure possesses a C1 symmetry and is not predicted to
possess an imaginary frequency. However, these two
symmetries of the cage isomer, along with a structure
with Cs symmetry, are predicted to be isoenergetic.
Consequently, we have chosen to identify the higher
symmetry structure (D2h) as the local minimum for the
cage isomer, which is consistent with that reported by
Grimme et al. [10]. In contrast, the cage-c2v isomer is
expected to be 1.03 eV higher in energy than the other
isoenergetic symmetries of the cage structure.
Table 1
Relative energiesa of the 24 C20 isomersb based on B3LYP/6-31G
calculations
Isomeric name Point group Multiplicity Relative energy (eV)
Ringc C10h 1 0.00
Bowl C5v 1 1.30
3-6loop D3h 1 2.27
Bowtie D2h 1 2.67
Halfbow C2v 1 2.68
2-6loop-tri C1 1 3.21
Cage D2h 1 4.05
c20-6om C2v 1 4.07
naphth þ 10 C1 1 4.35
C20-5m C2v 3 4.88
Cage-c2v C2v 1 5.08
Bowl-loop8 C1 1 5.22
c16 þ 4 C1 1 5.52
c20-6m C1 3 5.73
11 þ 2 þ 7 C2 3 5.78
c20-6p C2v 3 5.91
c12 þ 8 C1 1 5.92
4 þ 4cross C1 1 6.29
c13 þ 7 C1 1 6.77
Tank C1 1 7.02
c20-6o C1 3 7.13
c15 þ 4 þ 1 C1 1 7.56
Shuttle C1 3 7.80
c19 þ 1 C1 3 8.53
a Uncorrected total energies.b Cartesian coordinates or z-matrix for each isomer is available upon
request.c Total electronic energy ¼ 2761.3428 hartree.
C. Allison, K.A. Beran / Journal of Molecular Structure (Theochem) 680 (2004) 59–63 61
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Of the additional bowl structures, only c20-6om is
predicted to be a ground-state singlet and is only 0.02 eV
higher in energy than the cage (D2h) isomer. The stability of
this isomer in comparison to the other bowl-like structures
can be attributed to the location of the five-membered rings.
Having the five-membered rings nested between six-
membered rings, as occurs in the other four bowl-like
structures, not only induces a curvature of the geometry but
also increases the instability of the isomer. Since the five-
membered rings in c20-6om are isolated, the energy of this
isomer is 0.9 eV lower in energy in relation to its nearest
bowl-like structure with a central six-membered ring.
To bring the study to a higher level of theory, we reduced
the number of isomers in question to the eight isomers
lowest in energy, ring ! c20-6om. These eight isomers
were geometrically optimized using the B3LYP/6-311G*
method and incorporated symmetry constraints. This
method was chosen so that we could compare the relative
energies of the ring, bowl, and cage (D2h) with the results
reported by Grossman et al. [15]. As was the case in the
previous calculations, a vibrational analysis of each isomer
was conducted. Based on these optimized geometries,
single-point energy calculations were performed using
B3LYP/6-311G*. Vibrational analysis reveals that the
bowtie isomer, with its D2h symmetry, has two imaginary
frequencies (142i and -89i cm21). Re-optimization of this
isomer without symmetry constraints results in isoenergetic
C2h and Cs symmetries that occupy local minima. However,
they are predicted to lay 0.2 eV higher in energy than the
D2h symmetry. Consequently, we do not interpret the
imaginary frequencies to be indicative of a second-order
saddle-point for the D2h structure of the bowtie isomer.
Vibrational analysis also showed that the cage (D2h) and the
halfbow (C2v) isomers have imaginary frequencies of 233i
and 2179i cm21, respectively. In the case of the cage (D2h)
isomer, the small imaginary frequency did not lead us to
conclude that this structure occupies a first-order saddle-
point. For the halfbow isomer, re-optimization without
symmetry constraints produced a local minimum structure
with Cs symmetry. An energy comparison between the two
symmetries of the halfbow isomer revealed that they are
isoenergetic. Based on vibrational considerations, we have
included the Cs structure in Table 2. Table 2 lists the relative
energies for the eight isomers as determined by geometry
optimization and single-point energy calculations. The
relative energies are also represented graphically in Fig. 2.
The B3LYP/6-311G* calculations performed by Gross-
man et al. resulted in the ring being identified as the most
stable isomer, followed by the bowl (þ0.40 eV) and the
cage structures (þ2.33 eV). In comparison, our results do
show that the ring is indeed predicted to be the most stable
isomeric structure, followed by the bowl and the cage.
Although the relative single-point energy of the bowl
reproduces that reported by Grossman et al., we are 0.4 eV
higher in relative energy based on the total optimization.
For the cage isomer, we are 0.2 eV higher in relative
energy with respect to total optimization and 0.4 eV lower
in energy in terms of the single-point energy. Since
Grossman et al. [15] do not report symmetries for their
isomers, we are uncertain as to the cause of this slight
discrepancy, whether it is in fact due to symmetry
considerations or differences in methodology.
Table 2
Relative energiesa (eV) based on B3LYP/6-311G* geometries and
B3LYP/6-311G* single-point calculations
Isomers Point group B3LYP/6-311G* B3LYP/6-311G*//
B3LYP-6.311G*
Ring C10h 0.0b 0.0
Bowl C5v 0.8 0.4
3-6loop D3d 2.0 1.5
Bowtie D2h 2.3 1.8
Cage D2h 2.5 1.9
Halfbow Cs 2.5 1.8
2-6loop-tri C1 2.6 2.1
c20-6om C2v 3.3 2.7
a Uncorrected total energies.b Total electronic energy ¼ 2761.6833 hartree.
Fig. 2. Graphical representation of the relative energies compiled in Tables 1 and 2 for the eight isomers of C20 based on the levels of theory considered in this
work.
C. Allison, K.A. Beran / Journal of Molecular Structure (Theochem) 680 (2004) 59–6362
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Even at this higher level of theory, the relative stability of
the cage isomer is still receiving competition from four
other cyclic isomers using the hybrid exchange-correlation
functional. The single-point energy calculations at this level
of theory suggest that the cage, halfbow, and bowtie isomers
are nearly isoenergetic, with the 3-loop6 isomer lying only
0.3 eV lower in energy. The graphical depiction of the
relative energies suggest that by increasing the rigor of the
basis set, while utilizing the same DFT method, decreases
the difference in the total electronic energies of these
isomers.
The structural parameters for the ring, bowl, and cage
isomers obtained at this level of theory are in very good
agreement with that reported by Grimme et al. [10]. They
optimized the geometries of the three isomers at the MP2
level using a large polarized valence triple-z ([5s3p2d1f]
TZV2df) [25] atomic orbital basis set. For the ring isomer,
the geometry comparison between B3LYP/6-311G* and
Grimme et al., where their bond lengths are contained
within parenthese, yields alternating bond lengths of 1.226
(1.251) and 1.344 (1.337) A. The DFT correlation function,
therefore, views the electron distribution as being slightly
less uniform, accounting for the shorter ‘triple’ bond and a
slightly longer ‘single’ bond. Our studies show that the bond
lengths in the five-membered ring of the bowl isomer are all
1.428 (1.423) A. The length of the bonds extending from the
central pentagon into the six-membered rings is also
predicted to be 1.428 (1.434) A. The lengths of the external
bonds alternate between 1.241 (1.269) and 1.417 (1.411) A.
As with the ring, the DFT method exhibits a more localized
description of the electronic distribution, particularly along
the external bonds. Of the 15 different bond lengths reported
by Grimme et al. for the cage isomer, eight of the bond
lengths predicted using B3LYP/6-311G* are within
0.003 A, five bond lengths are with 0.015 A, and the final
two are within 0.028 A. As an aside, the same structural
parameters for these three isomers determined using the
B3LYP/6-31G method are only slightly less precise.
Consequently, there is not a dramatic gain in geometric
precision utilizing a more rigorous basis set when compared
to the geometric dimensions obtained with the B3LYP
method.
4. Conclusions
The present study focuses on evaluating the relative
stability of 24 unique isomers of the 20-carbon system.
Although this is only a small selection of the total possible
isomers, we have shown that based on this level of theory,
the ring structure with the C10h symmetry is the most
energetically stable. We have also shown that even though
there are several different potential symmetrical structures
for the cage isomer, the D2h symmetry is at least iso-
energetic with structures of lesser symmetry (C1 and Cs).
Of greater interest, however, we have determined that there
are several C20 isomers that are energetically competitive
with the cage isomer at this level of theory. The bowtie
(D2h) and the halfbow (Cs) isomers are nearly isoenergetic
to the cage, and the 3-6loop (D3d) isomer is predicted to be
0.4–0.5 eV lower in energy than the caged structure.
Additional investigations at higher levels of theory are
warranted to further evaluate relative energies of these other
cyclic structures.
Acknowledgements
This work was entirely supported by the Sponsored
Project Development Fund (SPDF) grant from The
University of Texas of the Permian Basin, Odessa, TX.
References
[1] H. Prinzbach, A. Weiler, P. Landenberger, F. Wahl, J. Worth,
L.T. Scott, M. Gelmont, D. Olevano, B. Issendorff, Nature 407 (2000)
60–63.
[2] G.V. Von Helden, M.T. Hsu, N.G. Gotts, P.R. Kemper, M.T. Bowers,
Chem. Phys. Lett. 204 (1993) 15–22.
[3] Z. Wang, X. Ke, Z. Zhu, F. Zhu, M. Ruan, H. Chen, R. Huang,
L. Zheng, Phys. Lett. A 280 (2001) 351–356.
[4] H.W. Kroto, Nature (London) 329 (1987) 529–531.
[5] Z. Wang, P. Day, R. Pachter, Chem. Phys. Lett. 248 (1996) 121–126.
[6] G. Galli, F. Gygi, J.-C. Golaz, Phys. Rev. B, 57 (3) (1998)
1860–1867.
[7] Z. Slanina, F. Uhlık, L. Adamowicz, J. Mol. Graphics Mod. 21 (2003)
517–522.
[8] L.C. Qin, X.L. Zhao, K. Hirahara, Y. Miyamoto, Y. Ando, S. Iijima,
Nature 408 (2000) 50.
[9] N. Wang, Z.K. Tang, G.D. Li, J.S. Chen, Nature 408 (2000) 50–51.
[10] S. Grimme, C. Muck-Lichtenfeld, Chem. Phys. Chem. 3 (2002)
207–209.
[11] Z. Chen, W. Thiel, Chem. Phys. Lett. 367 (2003) 15–25.
[12] S. Sokolova, A. Luchow, J.B. Anderson, Chem. Phys. Lett. 323 (2000)
229–233.
[13] E. Bylaska, P.R. Taylor, R. Kawai, J.H. Weare, J. Phys. Chem. 100
(1996) 6966–6972.
[14] J.M.L. Martin, J. El-Yazal, J.-P. Francois, Chem. Phys. Lett. 248
(1996) 345–352.
[15] J.C. Grossman, L. Mitas, K. Raghavachari, Phys. Rev. Lett. 75 (1995)
3870–3873.
[16] D.M. Deaven, K.M. Ho, Phys. Rev. Lett. 75 (1995) 288–291.
[17] K. Raghavachari, D.L. Stout, G.K. Odom, G.E. Scuseria, J.A. Pople,
B.G. Johnson, P.M.W. Gill, Chem. Phys. Lett. 214 (1993) 357–361.
[18] V. Parasuk, J. Almlof, Chem. Phys. Lett. 184 (1991) 187–190.
[19] K.R. Greene, K.A. Beran, J. Comput. Chem. 23 (2002) 938–942.
[20] K.A. Beran, J. Comput. Chem. 24 (2003) 1287–1290.
[21] J.I. Chavez, M.M. Carrillo, K.A. Beran, J. Comput. Chem. 25 (2003)
322–327.
[22] Spartan ’02, Wavefunction, Inc., Irvine, CA.
[23] R. Dithcfield, W.J. Hehre, J.A. Pople, J. Chem. Phys. 54 (1971)
724–728.
[24] C. Lee, W. Yang, R.G. Parr, Phys. Rev. B 37 (1988) 785–789.
[25] A. Schafer, C. Huber, R. Ahlrichs, J. Chem. Phys. 100 (1994)
5829–5835.
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