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Introduction to pure shift NMR Dr. Juan A. Aguilar Durham University June-2014 [email protected]

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Page 1: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Introduction to pure shift NMR

Dr. Juan A. Aguilar

Durham University

June-2014

[email protected]

Page 2: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Menu

- The definition and the reason

- One-dimensional experimentsThe Zangger-Sterk pulse sequenceThe ZS-BIRD-HybridHow to use them

- Multi-dimensional experiments3D Variants2D variants based on real-time compression

Constant-time versions

- Questions

[email protected]

Page 3: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

What is it?

[email protected]

~ 50 Hz wide

~ 1 Hz wide

Single signal for each chemical site

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Pure shift 1H1H

Pure shift

Because they help solving problems

Why do you want to use these methods?

[email protected]

One signal from degradation products ?

No, two

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7.57.67.7

128

129

130

131

132

Classic Pure shift

7.57.67.7δ

H / ppm (F

2) δ

H / ppm (F

2)

Surely 2D-NMR makes it unnecessary: HSQC

[email protected]

Page 6: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Surely 2D-NMR makes it unnecessary: COSY

7.67.88.08.28.4ppm

7.6

7.8

8.0

8.2

8.47.67.88.08.28.4

ppm

7.6

7.8

8.0

8.2

8.4

True pure shiftClassic

In order to produce unambiguous data true pure shift was necessary, i.e. both H-H and H-P splittings had to be suppressed

N

OH

P

O

OEt

Br

H2SO

80 oC

4 (conc.)

N

OH

P

O

OH

Br SO3H

+ ?

Page 7: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

19F

Pure shift 1H

1H

Pure shift NMR is a broader concept than that of homo-decoupling

H-F couplings werehard to measurefrom either 1H or 19F spectrabut easier fromthe pure shift experiment.

Notice this is not a truepure shift spectrum becauseH-F couplings are present.This, however, is useful.

Page 8: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Zangger and Sterk: J-refocusing

[email protected]

The combination of selective and non-selective 180 rotations:

- refocuses the evolution under the coupling - but allows that of the chemical shift to evolve

Page 9: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Assembly

* J modulation is slow, so a block of data points lasting 1/sw1 << 1/J can be measured for each value of t1

Zangger and Sterk: (2D) Chemical shift sampling

Increment t1 stepwise,

Typically 32-64 blocks of 20 ms *

Typical experimental time: 5-10 minutes using a 5-10 mM sample

Typically 20 s

Page 10: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Chunking artefacts are usually not seen.

They can be seen in this samplebecause the concentration is highand because some couplings are high.

Cleaner results can be producedreducing the chunking time.

1H

2 sw1 Hz2 sw

1 Hz

The consequences of chunking

CO2H

CF3

F

Typically 20 ms chunksare collected(sw

1= 50 Hz)

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Zangger and Sterk: multiplexing

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Whole sample 1H spectrum

0.00.51.01.52.02.5

Bo + zG

z

Sensitivity bw180

/sw

Page 12: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Uninterestingprotecting groups

Focus on the area that that contains the problem

1H

ZS 1H

Wasted sensitivity

Empty space=

Wasted sensitivity

Empty space

=

wasted sensitivity

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Focus on the area that that contains the problem

ZS 1H, decoupling 2 ppm

ZS 1H, decoupling 6 ppm

1H

- Less hardware demanding- Fewer distortions- Better sensitivity

Page 14: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

The BIRD - Zangger-Sterk hybrid

1H-X filter BIRDd rotation

The BIRDd rotation inverts only protons directly coupled to 13C

Isotopic dilution ensures that their coupled partners are not inverted

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7.8 ppm 7.4 7.0 6.6 6.2 5.8 5.4

Mild strong coupling

Catecholisotopomers

Resorcinolisotopomers

Severe strong coupling

Strong couplingSide-band?

BIRDd rotation

The BIRDd rotation inverts only protons directly coupled to 13C

Isotopic dilution ensures that their coupled partners are not inverted

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The PSYCHE- Zangger-Sterk hybrid

Improved sensitivity (it avoids sample slicing, pulse field gradients are only used for signal selection)Improved performance regarding strong coupling

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[email protected]

+ Sensitive when the bandwidth (sw) is narrow

bw180

/sw

- More sensitive to strong coupling

+ Fully decouples geminals (usually)

Bottom line:Ideal to decouple aliphatic regions

- Typically less sensitive but its sensitivity, is almost independent of the bandwidth, < 1 %

+ Less sensitive to strong coupling

- Partially decouples geminals

Bottom line:Ideal to decouple aromatic regions

Zangger-Sterk Zangger-Sterk - BIRD

ppm0.81.01.21.41.61.82.02.22.42.6

1H

Geminals partly decoupled

ZS 1HGeminals fully decoupled

ZS-BIRD hybrid 1H

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1H

ZS 1H

ZS-BIRD hybrid 1H

Page 19: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

The PSYCHE hybrid

Improved sensitivityImproved performance with strong coupling

ZS snob 60 ms – 5 min

PSYCHE 60 ms - 5 min

1H

Page 20: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Multi-dimensional pure shift experiments

[email protected]

How-to: Merge the pure shift sequence with your experiment (except for COSY)

The problem: The experiment will now be 32-64 times longerThe solution: Compress the whole 2D chemical shift sampling scheme into a single acquisition using real-time compression.

t1 t2/2t2/2t

G0

Gz

1H

90º 90º 90º

Φ1

Φ2

Φ3

Φ4

Φ5

ΦR

180º 180º

Gsl

G1

-G1

-2G1

1 / sw2

Pure shift da

NOESY (2D) + Pure shift with classic 2Dchemical shift sampling= 3D experiment (long)

Pure shift 1Hwith classic 2Dchemical shift sampling

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Multi-dimensional pure shift experimentswith real-time compression

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A full 2D pure shift Experiment compressed

into a single fid

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[email protected]

Shortened fid = broadening

Real-time compression

How-to

Compress a full 2D sampling scheme into a single acquisition

Acquire – J-refocus - acquire – J-refocus - acquire - J-refocus – acquire

Original fid

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6.97.17.37.57.67.8

122

124

126

128

130

δH / ppm (F

2)

7.07.27.47.67.8δ

H / ppm (F

2)

Broadening in contextUndesirable but better off with than without

Classic HSQC Pure shift HSQC (real-time version)

Important but obvious

- Make sure that the fid is long enough to be able to tell the difference between a singlet and a multiplet Typical HSQC acquisition times are inappropriate to produce pure shift data.

- Make sure your pulses are decently calibrated, you are going to produce multiple rotations

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7.277.297.317.337.357.37

127.6

128.0

128.4

128.8

129.2

7.277.297.317.337.357.37

δH / ppm (F

2)δ

H / ppm (F

Unexpected benefits: attenuation of anti-phase peaks

COSY-like anti-phase signals

Classic HSQC Pure shift HSQC (real time version)

Page 25: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Constant-time techniques

[email protected]

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Constant-time techniques

Page 27: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

Thanks to:

Gareth Morris (Manchester)Mathias Nilsson (Manchester)

Alan Kenwright (Durham)Martina Delbianco (Durham)

Julia Cassani (Mexico, Mexico DF)

Page 28: Dr. Juan A. Aguilar Durham Universitynmrweb.chem.ox.ac.uk/Data/Sites/70/ukmrm/ukmrm_june_2014...Dr. Juan A. Aguilar Durham University June-2014 j.a.aguilar@durham.ac.uk Menu - The

- Always acquire full fids, not only 20 ms ones (except for the ZS-BIRD hybrid).

- Do not use the reconstruction macro, use a double FT instead.

Multiplicity determination using ZS-type sequences

1H

ZS-1H using the reconstruction macro

ZS-1H using a double FT

For these matters is preferable a phase sensitive J-resolved Pell-Keeler-ZS variant.

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Phase sensitive J-resolved Pell-Keeler-ZS

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Strong coupling artefacts (*)

1H

Camphene

Geraniol

ZS 1H

Strong coupling (*)

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ppm7.27.47.67.88.08.28.4

F NO2J

HF= 4.9 Hz J

HF= 8.4 Hz

* * * * * * * *

Strong coupling artefacts (*)

ZS-BIRD hybrid

PSYCHE

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Chunking artefacts

1H

Chunk size= 10 ms

Chunk size= 20 ms

Chunk size= 40 ms

Chunk size= 5 ms

500 MHz spectra of EtOH in Methanol-d4