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Development of Thermally Stable Versions of the Burgess Reagent. Approaches to the Chemoenzymatic Total Synthesis of Morphine Thomas A. Metcalf Department of Chemistry Submitted in partial fulfillment of the requirements for the degree of Master of Science Faculty of Mathematics and Science, Brock University St. Catharines, Ontario © December 2010

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Page 1: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

Development of Thermally Stable Versions of the Burgess Reagent. Approaches to the Chemoenzymatic Total Synthesis of Morphine

Thomas A. Metcalf

Department of Chemistry

Submitted in partial fulfillment of the requirements for the degree of

Master of Science

Faculty of Mathematics and Science, Brock University St. Catharines, Ontario

© December 2010

Page 2: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

Abstract

The present studies describe our recent work on expanding the use of the Burgess

reagent and its reaction with oxiranes. Several new variants of the Burgess reagent and its

chiral auxiliary version were evaluated for their thermal stability by NMR spectroscopy.

Three new versions of the reagent were synthesized and their stability was determined.

The reactivity of all five Burgess reagents was compared in a dehydration reaction and

reactions with epoxides and diols.

Progress toward a chemoenzymatic synthesis of morphine is also included in this

report. The synthesis began with the whole cell oxidation of bromobenzene by

Escherichia coli JMI09(pDTG601). The preparation of several precursors for a key step

involving the lohnson-Claisen rearrangement and progress toward the total synthesis are

described.

-11-

i

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Acknowledgements

There are many people to whom I am very indebted to for all of their help and

support. First, I would like to thank my advisor, Dr. Tomas Hudlicky for allowing me the

opportunity to work with him and for all of his patience and unwavering interest in my

progress and development as a chemist.

I would like to thank the members of my graduate committee Dr. Georgi

Nikonov, Dr. Tony Yan, Dr. Tomas Hudlicky, Dr. Heather Gordon, and the external

examiner Dr. James Green of the University of Windsor. Thanks are also due to Dr.

Stuart Rothstein, Chris Skorski and Beulah Alexander for making sure I had all of the

necessary paperwork turned in and helping me navigate the administrative bureaucracy.

Razvan Simionescu and Tim Jones are greatly appreciated for their help in both

acquiring and interpreting NMR and mass spectra. Thanks are due to Gary McDonnell at

the Electronics Shop, Steve Crumb at the Machine Shop and John and Jordan Vandenhoff

at the Glass Shop for keeping our lab running smoothly.

I have had the opportunity to work with many talented chemists in my time at

Brock University. Dr. Robert Carroll, Dr. Mohammed Haque, Dr. Hannes Leisch,

Elisabeth Kloser, Dr. Bradford Sullivan, Dr. Jon Collins, Dr. Ales Machara, Dr. Lukas

Werner, Mrs. Martina Wernerova, Dr. Jan Duchek, Amy English, Melissa Drouin,

Jacqueline Gilmet, Vigi George, Ignacio Carrera, Leon Sun, Tyler Bissett, Robert

Giacometti, David Ilceski, David Adams, Sergey Vshyvenko, Graeme Piercey, Vimal

Varghese, Christian Aichinger, Vladislav Semak, Yasmeen Albalawi, Hollich Ho and Jon

- 111 -

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Scattalon. Thanks are also due to Brock University and the National Science and

Engineering Research Council of Canada (NSERC) for funding my studies.

Finally, I am grateful to my parents, my brother Benjamin, my sisters Lynn and

Anna and the rest of my family.

-tv -

Page 5: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

Table of Contents

Abstract u

Acknowledgements 111

List of figures Vll

List of tables xu

List of abbreviations Xlll

1. Introduction 01

2. Historical 03

2.1 Burgess reagent 03

2.1.1 Development of the Burgess reagent and dehydration reactions 03

2.1.2 Alternative reactions of the Burgess reagent 08

2.1.3 Variants of the Burgess reagent 16

2.1.4 Applications of the Burgess reagent in total synthesis 20

2.2 Morphine 26

2.2.1 Historical uses, isolation and biosynthesis 26

2.2.2 Notable syntheses of morphine 31

2.3 Microbial Oxidation of Arenes 43

2.3.1 History of microbial oxidation ofarenes 43

2.3.2 Isolation and characterization of toluene dioxygenase (TDO) 45

2.3.3 Substrate scope and specificity 46

2.3.4 Use of microbial oxidation in synthesis 48

2.4 Claisen rearrangement 52

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Page 6: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

2.4.1 Variations of the Claisen rearrangement

2.4.2 Use ofthe Claisen rearrangement in organic synthesis

3. Discussion

3.1 Introduction

3.2 New Burgess reagents

3.3 Stability studies

3.4 Synthesis of morphine C-ring fragment

3.5 Coupling of A-ring fragment

3.6 Synthesis of CIa is en substrates

3.7 Claisen rearrangement

3.8 Biotransformations

4. Conclusions and future work

5. Experimental section

5.1 General

5.2 Preparation of new Burgess reagents

5.3 Stability studies

5.4 Intermediates in morphine synthesis

5.5 Biotransformations

6. Selected Spectra

7. References

8. Vita

53

57

60

60

61

65

71

72

74

76

78

81

83

83

84

91

92

100

104

126

132

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Page 7: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

List of Figures

Figure I-Design of new Burgess reagents 01

Figure 2-Retrosynthetic analysis for morphine 02

Figure 3-Burgess' sulfonylamine preparation 03

Figure 4-Generation of N-sulfonylamines 03

Figure 5-Electrophilic addition to N-(triethylammoniumsulfonyl)carbamate

inner salt 04

Figure 6-Dehydration reactions of secondary and tertiary alcohols

with Burgess reagent 04

Figure 7-Reaction of Burgess reagent with n-hexanol 05

Figure 8-Formation of diene or urethane from an allylic alcohol

with Burgess reagent 05

Figure 9-Mechanism of dehydration by Burgess reagent 06

Figure 10-Dehydration of alcohols with stabilized carbocation intermediates 06

Figure II-Dehydration of ami des to nitriles with Burgess reagent 07

Figure I2-Conversion of cis-aldoximes to nitriles with Burgess reagent 07

Figure 13-Synthesis ofisocyanides from formamides 07

Figure I4-Barvian's preparation of carbodiimides from ureas 08

Figure 15-Dehydration of nitro alkanes with Burgess reagent 08

Figure I6-Cyc1odehydration of P-hydroxy-a-amino acids with Burgess reagent 09

Figure I7-Formation ofthiazoline rings under various conditions 10

Figure I8-Formation of p-amino alcohols from styrene derived diols 11

Figure 19-5ynthesis of sulfamides from amino alcohols 11

- Vll-

Page 8: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

Figure 20-Nicolaou's synthesis of (1- and ~-glycosylamines 12

Figure 21-Formation ofsulfilimines from sulfoxides 13

Figure 22-Preparation of acyl ureasand amides from carboxylic acids 14

Figure 23-Formation of 5- and 7-membered sulfamidates from epoxides 15

Figure 24- Hudlicky's proposed mechanism for the formation of

cis-cyclic sulfamidates

Figure 25-Correction of the structure of 76

Figure 26-Formation of symmetrical disulfides from thiols

Figure 27-Burgess reagents utilized by Nicolaou

Figure 28-Wipfs preparation of PEG linked Burgess reagent 118

Figure 29-Brain's synthesis of 1,3,4-oxadiazoles with

PEG supported Burgess reagent

Figure 30-Montero's sulfamoylating reagent

Figure 3l-Masui's one pot preparation of sulfamides

15

16

16

17

17

18

18

19

Figure 32-Reaction of Hudlicky's chiral auxilIary Burgess reagent with epoxides 19

Figure 33-Dehydration of steroidal alcohols by Burgess reagent 20

Figure 34-Application of Burgess reagent in Stork's ketosteroid synthesis 21

Figure 35-Rigby's use of the Burgess reagent in the syntheses

of cedrene and narciclasine 21

Figure 36-Use of the Burgess reagent in Kita's synthesis offredericamycin A 22

Figure 37-Use of the Burgess reagent in Ciufolini's studies

toward the synthesis of sordarin 22

- V111-

Page 9: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

Figure 38-Application of Burgess cyclodehydration in the synthesis

of (+ )-curacin A 23

Figure 39-Raghavan's syntheses of (-)-deoxocassine and (+)-desoxoprosophylline24

Figure 40-Hudlicky's enantiodivergent formal synthesis ofbalanol 25

Figure 41-Structure of morphine and related alkaloids 27

Figure 42-Biosynthesis of morphine 30

Figure 43-Altemate pathway for the conversion of thebaine to morphine 31

Figure 44-Gates' synthesis of intermediate 177 32

Figure 45-C-14 epimerization 33

Figure 46-Final transformations in Gates' synthesis of morphine 34

Figure 47-Rice's synthesis of cyclization precursor 190 35

Figure 48- Final transformations in Rice's formal synthesis of morphine 36

Figure 49-Hudlicky's synthesis of intermediate 200 37

Figure 50-Hudlicky's transformation of 200 to ent-codeine 38

Figure 51-Hudlicky's synthesis of the natural enantiomer of codeine 39

Figure 52-Chida's synthesis of intermediate 218 40

Figure 53-Chida's cascade and sequential Johnson-Claisen rearrangements 41

Figure 54-Final steps in Chida's formal synthesis of morphine 42

Figure 55-Gibson's proposed mechanism for diol and catechol.formation

by P. putida 43

Figure 56-Metabolism of p-chlorotoluene by P. putida 44

Figure 57-Proof of relative stereochemistry of P. putida metabolites 44

Figure 58-Proof of absolute stereochemistry of P. putida metabolite 236 45

-IX -

Page 10: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

Figure 59-Boyd's model for the prediction of stereoselectivity of

TDO dihydroxylations 46

Figure 60-Boyd's expanded model for the stereoselectivity of

TDO dihydroxylations 46

Figure 6 I-Oxidation of o-halostyrenes by TDO 47

Figure 62-Metabolism of benzoate esters by TDO 48

Figure 63-Preparation ofpolyphenylene from 230 48

Figure 64-Ley's synthesis of(±)-pinitol 49

Figure 65-Hudlicky's synthesis of prostaglandin synthon 259 50

Figure 66-Landmark syntheses employing microbial dihydroxylation 51

Figure 67-The Claisen rearrangement 52 I

"j

Figure 68-Chair and boat transition states for the Claisen rearrangement 53

Figure 69-The Reformatskii-Claisen rearrangement 53

Figure 70-The retro-Claisen rearrangement 54

Figure 71-The Ireland-Claisen rearrangement 55

Figure 72-The Kazmaier-Claisen rearrangement 55

Figure 73-The lohnson-Claisen rearrangement 56

Figure 74-Hudlicky's general method for the synthesis oflinear and

non-linear triquinanes 58

Figure 75-Hudlicky's preparation of unnatural amino acids via a

Kazmaier-Claisen rearrangement 59

Figure 76-Chida's cascade and sequential lohnson-Claisen rearrangements 59

Figure 77-Burgess reagents employed in this study 61

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Page 11: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

Figure 78-Preparation of Burgess reagents 62

Figure 79-Possible mechanisms for the formation of 322 65

Figure 80-Decomposition of Burgess reagents at 50 DC in THF-d8

as a function of time 66

Figure 81-Decomposition of Burgess reagents at reflux in THF -d8

as a function of time 67

Figure 82-Decomposition of 1 at 50 DC and at reflux 68

Figure 83-Decomposition of124 at 50 DC and at reflux 68

Figure 84-Decomposition of312 at 50 DC and at reflux 69

Figure 85-Decomposition of313 at 50 DC and at reflux 69 I I

Figure 86-Decomposition of314 at 50 DC and at reflux 70 I

oj

I Figure 87-Synthesis of the C-ring fragment of morphine 71 I

Figure 88-Separation of diastereomers and recycling of331 72

Figure 89-Preparation of A-ring fragment 8 73

Figure 90-Suzuki coupling of 8 and 9 74

Figure 91-Synthesis of alcohol 338 75

Figure 92-Preparation of Cia is en substrate 340 75

Figure 93-Preparation of cyclic carbamate 6 75

Figure 94-Attempted 10hnson-Claisen rearrangement 76

Figure 95-Chida's intermediate compared to Claisen substrates

prepared in this thesis 81

Figure 96-Proposed cycloaddition strategy for the completion ofthe synthesis

of morphine 82

- XI-

Page 12: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

List of Tables

Table I-Reactivity trends of the new Burgess reagents in dehydration,

reactions with oxiranes, and with styrene diol 64

Table 2-0ptimization of epimerization conditions 72

Table 3-0ptimization of Suzuki coupling 74

Table 4-Substrates and conditions attempted in Johnson-Claisen rearrangement 77

Table 5-Metabolism of halogen substituted benzoate esters by TDO 80

- Xll-

Page 13: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

List of Abbreviations

2,4DNP 2,4-dinitrophenyl hydrazine

Ac acetyl

Boc tert-butyloxycarbonyl

(BochO di-tert-butyl dicarbonate

Cbz carboxybenzyl

CDCh deutero-chlorofornn

CDCh chlorofornn

conc. concentrated

CSA camphorsulfonic acid

CSI chlorosulfonyl isocyanate

DAST diethylaminosulfur trifluoride

DBU 1,8-Diazabicyclo[ 5 .4.0]undec-7 -ene

DCC dicyclohexylcarbodiimide

DCE 1,2 dichloroethane

DCM dichloromethane

DEAD diethyl azodicarboxylate

DIAD diisopropyl azodicarboxylate

DIPEA diisopropylethylamine

DMAP dimethylamino pyridine

DME dimethoxyethane

DMF N,N-dimethylfornnamide

DMSO dimethyl sulfoxide

- X111 -

Page 14: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

dppf

dr

EDG

EI

eq.

er

Et20

Et3N

EtOAc

EWG

FAB

h

HATU

HCI

HMBC

Hz

IBX

i-Pr

IPTG

IR

J

LAH

1,1 ' -bis-( diphenylphosphino )ferrocene

diastereomeric ratio

electron donating group

electron ionization

equivalent(s)

enantiomeric ratio

diethyl ether

triethylamine

ethyl acetate

electron withdrawing group

fast atom bombardment

hour(s)

2-(1H-7-azabenzotriazol-I-yl)--1,1,3,3-tetramethyl uronium

hexafluorophosphate methanaminium

hydrochloric acid

heteronuclear multiple bond correlation

Hertz

2-iodoxybenzoic acid

isopropyl

~-isopropylthiogalactopyranoside

infrared spectroscopy

coupling constant

lithium aluminum hydride

- XIV-

Page 15: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

LDA

M*

MeCN

mm

mp

MS

n-BuLi

NADH

NADPH

NBA

NMR

p-Tol

PAD

PBU3

PEG

PhH

PhMe

PMB

PMP

PPh3

ppm

quant.

rt

lithium diisopropyl amide

menthyl

acetonitrile

minute(s)

melting point

mass spectroscopy

n-butyllithium

Nicotinamide adenine dinucleotide

Nicotinamide adenine dinucleotide phosphate

N -bromo acetamide

nuclear magnetic resonance

p-tolyl

potassium azodicarboxylate

tributyl phosphine

poly( ethylene glycol)

benzene

toluene

p-methoxybenzyl

p-methoxyphenyl

triphenyl phosphine

parts per million

quantitative

room temperature

- xv-

Page 16: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

TBAF tetrabutylammonium fluoride

TBS tert-butyldimethylsilyl

TDS thexyldimethylsilyl

t-Bu tert-butyl

TDO toluene dioxygenase

TFA trifluoroacetic acid

THF tetrahydrofuran

TIBAL tri-isobutyl aluminum

TLC thin layer chromatography

TMS tetramethylsilane

W Watt(s)

- XVI-

Page 17: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

I. Introduction

This thesis is presented in two parts. In the first part, the design of new variants of

type 2 of the Burgess reagent 1 and their thermal stability is to be investigated. The

second part is concerned with progress toward the total synthesis of morphine 3 with the

key steps being biooxidation of bromobenzene 4 and a Claisen rearrangement to set the

C-13 quaternary center.

The Burgess reagent 1 is a useful tool for performing a variety of transformations

in organic synthesis. However, it is unstable at high temperatures and in the presence of

acids. We investigate new variants of the reagent to overcome this instability and then

evaluate the stability and reactivity by NMR techniques. The methoxy portion of the

carbamate will be replaced with the more electron withdrawing 2,2,2-trifluoroethanol to

better stabilize the negative charge. The triethylamine portion will be replaced with the

more electron donating N-methylpiperidine to stabilize the positive charge (Figure 1).

EDG EWG 2

Figure i-Design of new Burgess reagents

Morphine (3) is a commonly used analgesic with a complex structure. Its use by

mankind has spanned centuries. Our proposed synthetic route, shown in Figure 2, begins

with the dihydroxylation of bromobenzene (13) with Escherichia coli JM109

(pDTG601). Reduction of the distal double bond and coupling with Boc glycine will

provide 11 which will be subjected to a Kazmaier-Claisen rearrangement. Subsequent

methylation and separation of the diastereomers will give the C-ring fragment 9 which is

to be coupled to A-ring fragment 8. The coupled intermediate will be further elaborated

- 1 -

Page 18: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

to the substrate for the second Claisen rearrangement 6. Subsequent closure of the B- and

D-rings and further elaboration should provide morphine (Figure 2).

Connected to the biooxidation of bromobenzene (13) to diol 12 was the

investigation of several halogen substituted benzoate esters that were tested as substrates

for the enzyme toluene dioxygenase (TDO). The yields and physical and spectral

properties of the new metabolites will be presented.

Br C02Me Br C02Me /o~

.~ NHBoc <~~ === .~NHBOC + 'O~ <~~ === TDSO" V TDSO" V B(OHh

10 9 8 I

B 0

cxo~NHB" 11 OTDS

--""",> LOH

UOH 12

----;I> 6 13

Figure 2-Retrosynthetic analysis for morphine

- 2-

Page 19: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

2. Historical

2.1 Burgess reagent

2.1.1 Development of Burgess reagent and dehydration reactions

The fIrst reported synthesis of an alkyl N-(triethylammoniumsulfonyl)carbamate

inner salt was in 1968 when Edward Burgess and George Atkins studied the reactivity of

N-sulfonylamines. 1 Inner salt 15 was an intermediate that was subjected to fragmentation

to prepare N-sulfonylamine 16 (Figure 3).

0" ,9 ~ Et3N ... S'N ............. O./'-......

(±) e 15

Figure 3-Burgess' sulfonylamine preparation

+

16

In their previous work 16 was generated in-situ by treating 14 with one equivalent

of triethylamine and intercepting the unstable sulfonylamine with a nucleophile such as

aniline (17).1 The more reactive benzoyl sulfonylamine 19 was also generated in the

presence of ethyl-vinyl ether (21) to form cycloadduct 22 (Figure 4).

0 -78°C Et3N 0 Qo 0 0 0" ~O )l 0, )l H2NPh (17)

Cr· ... S'N O~ .. 'S=N O~ ~ N~S~N)lO~ - Et3NHCI "

.. H 0 H H 14 16 18

0 0 ~O~

o 0

o"p~ -78°C Et3N 0, ~ o~g ~ Cr ... ·S'N ~ .. ~S=N I: 21 q I: H 1 b

- Et3NHCI .. OEt

19 20 22

Figure 4-Generation of N-sulfonylamines l

Burgess and Atkins reported several electrophilic additions to 15 (Figure 5).2 The

reaction of 15 with aniline gave 17 in 92 % yield. The addition of N-vinylpyrrolidinone

- 3 -

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(23) to 15 gave 24 in 50 % yield and the addition of isopropanol to 15 gave 26 in low

yield.

o 0 0 .... II II

o~~SY"OEI OH

A 25

V 24

Figure 5-Electrophilic addition to N-(triethylammoniumsulfonyl)carbamate inner salf

In 1970, Burgess prepared the methyl variant of the inner salt 1, which would

later be named the Burgess reagent. This compound was found to be a very mild

dehydrating agent for secondary and tertiary alcohols (Figure 6).3

OH

A ~ 25 .. 27

0 b OH d? O~-,/O )l Et N ... S .... N 0/ 28

3Et:) e .. 29

1

>r0H

A 30 .. 31

Figure 6-Dehydration reactions of secondary and tertiary alcohols with Burgess reagene

When primary alcohols were treated with the Burgess reagent, dehydration did

not occur. Instead, primary urethane 32 was formed via an SN2 pathway (Figure 7).3

-4-

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n-hexanol

90%

o ~N)lO/

32 H

Figure 7-Reaction of Burgess reagent with n-hexanoe

Depending on reaction conditions, allylic alcohols were shown to either undergo

dehydration reactions or form urethanes via an SN2 pathway rearrangement (Figure 8).3

~

35,70 %

triglyme OIl(

+

1

OH

~ 33

1. neat, 80 DC ,.

36, >90 %

Figure 8-Formation of diene or urethane from an allylic alcohol with Burgess reagene

In the 1970 full paper, isotope studies were presented that showed that the

elimination of an alcohol by 1 was a syn-elimination.3 Erythro and threo-2 deutero-l,2-

diphenyl ethanol (37 and 38 respectively) were treated with Burgess reagent. The former

yielded only trans-stilbene (39) while the latter yielded only protio-trans-stilbene (40).

The rate limiting step was shown to be the formation of an ion pair 42 followed by a fast

cis-p-proton transfer (Figure 9).

- 5 -

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O}- / O}- /

° 0 o 0

O~s-Ne O~s-Ne H Ph HO 0 1 slow

eq ) fast

prH H'H"Ph I

)Do )Do )Do 0 0 (!)

H'H"Ph " 0 Ph H -Et3NH f£< 37 Ph H H'" "'Ph 39

41 Ph H

42

H Ph HO H 1

pro '''H''Ph )Do

(!) Ph 0 -Et3NH

38 40

Figure 9-Mechanism of dehydration by the Burgess reagent

When the carbocation intermediate in a dehydration reaction is highly stabilized,

rearrangements can occur thus making olefin formation less predictable, as in the case of

46 (Figure 10).3

00H 1 ~ ~ )0

43 44 (2.4) 45 (1)

>f-H 1 ~ )0-

46 47

-j-{H 1 h >=< H )0-

49 (1) 50 (3) 51 (1.5)

48

Figure 10-Dehydration of alcohols with stabilized carbocation intermediates (product ratio)

Following Burgess' work on dehydration reactions with 1, several other reactions

were reported. In 1988, Claremon and Phillips reported the dehydration of primary

amides to nitriles with the Burgess reagent (Figure 11).4

- 6-

Page 23: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

o 0

0 OH [ O~S'-N)lo/] R)lNH2

"'" RANH

1 LO G) ... .. A"H R N'

-----l .. ~ R-C=N

52 53 54 55

Figure ll-Dehydration of amides to nitriles with the Burgess reagent4

Prathapan and co-workers reported the synthesis of nitriles from cis-aldoximes

with the Burgess reagent in 2000 (Figure 12).5

H

~N,OH U

56

1,3 eq . ...

58,66 %

Figure 12-Conversion of cis-aldoximes to nitriles with the Burgess reagentS

McCarthy and co workers used the Burgess reagent to convert formamides to

isocyanides (Figure 13).6

59

1, 1.5 eq ... DCM, reflux

60,80 %

Figure 13-Synthesis of isocyanides from formamides6

Building on the work of Claremon, Barvian and co-workers used the Burgess

reagent to dehydrate ureas to carbodiimides in up to 91 % yield. These reactions were

often clean enough not to require chromatography of the products (Figure 14).7

- 7 -

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1,2.1 eq

DCM, rt, 20 hrs

Ph_N=C=N~OMe

~OMe 62,91 %

Figure 14-Barvian's preparation of carbodiimides from ureas7

As part of a research project on milder conditions for the dehydration of primary

nitroalkanes, Mioskowski and co-workers reported that the Burgess reagent worked

under mild conditions (Figure 15).8 However, they found diethylaminosulfur trifluoride

(DAST) to be the best reagent for the dehydration of nitroalkanes.

3 eq. 1, 5 eq Et3N •

PhMe, 50 DC ~C~~e V 0

~nC4H9 ~nC4H9 ----~~~ V N-d

64 65

Figure 15-Dehydration of nitroalkanes with Burgess reagent8

Burgess dehydrations are often milder than standard acid catalyzed dehydrations.

Often, the Burgess reagent can effect a dehydration at temperatures lower than 70 DC.

2.1.2 Alternative reactions of the Burgess reagent

Since the 1990s reactions employing the Burgess reagent have been greatly

expanded to include cyclodehydration reactions and non-dehydration reactions including

the formation of heterocycles and various functional group interconversions.

Wipf and co-workers employed the Burgess reagent in a cyclodehydration

reaction. ~-Hydroxy-a-amino acids of type 66 were treated with Burgess reagent (1) to

yield 4,5-dihydrooxazolines 68 (Figure 16).9 When Mitsunobu conditions were used for

this reaction, there were often side products, such as aziridines, formed. to

- 8 -

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1, THF lit

66

j

DCM, DoC

69 70 Figure 16-Cyclodehydration of P-hydroxy-a-amino acids with the Burgess reagent9

Wipf also applied this methodology to the formation of thiazoline peptide analogs

(Figure 17) .11 The Burgess reagent gave the desired thiazolines in 96 % yield with 97:3 dr

in about 10 minutes. The same reaction under other conditions, such as TsClIEt3N,

SOClz/pyridine or Mitsunobu conditions, was lower yielding and led to extensive

epimerization at the C-2 position.

- 9-

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+

72

Conditions Yield [%J Ratio 72:73

TsCI, Et3N, DCM, 42°C, 1 hr 40 1 :1

1. SOCI2, 0 °C, 2 hr; 2. pyridine, THF, O°C, 15 min 49 1: 1

Ph3P, DIAD, DCM, -78 to 22°C, 30 min 80 78:22

Burgess reagent (1), THF, 65°C, 10 min 96 >97:3

Figure 17-Fonnation ofthiazoline rings under various conditionsll

Li employed the Burgess reagent as a cyclodehydration agent in the preparation of

a series of N-bridged 5,6-bicylic pyridines. 12

The Nicolaou group employed the Burgess reagent in the synthesis of several

sulfone containing heterocycles.13 In 2002, Nicolaou and co workers reported that the

Burgess reagent could be used to synthesize sulfamidates from chiral 1,2 diols with

excellent regio- and stereoselectivity.14 The diols were prepared from styrene by the

Sharpless asymmetric dihydroxylation and then treated with excess Burgess reagent

yielding the cyclic sulfamidates. The sulfamidates were then hydrolyzed under acidic

conditions to yield p-amino alcohols (Figure 18). The minor product was originally

assumed to be regioisomer 76 but was later proven to be misassigned (See pages 15-16

for discussion ofthe structure correction).

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OH

~OH V

2.5 eq 1, THF

reflux,1 hr

74

o " II 0 O~ 1

51-0

N- -- \ ~ 0

V

o 110

0-5-:::' - \ 0 + ~ N-f VO-

75 major 76 minor (assumed structure)

I Hel, 4 M I Hel, 4 M t H20:dioxane (1 : 1) t H20:dioxane (1: 1 )

o 'o..J<

NH ::- OH

V 77 78

Figure IS-Formation of ~-amino alcohols from styrene derived diols14

Nicolaou expanded on this methodology using the Burgess reagent to synthesize

5,6, and 7-membered sulfamides from amino alcohols (Figure 19).15

1

79

1

81

1

83 84

Figure 19-5ynthesis of sulfamides from amino alcohols15

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Nicolaou and co-workers applied their methodology to the synthesis of (l- and

~-glycosylamines (Figure 20).16 The Burgess reagent was well suited to this chemistry

because regio- and stereo selectivity are very predictable. For the preparation of (l-

glycosylamines 88, 3,4,6-protected sugars 85 were treated with the Burgess reagent. The

resulting sulfamidate 87 was then subjected to nucleophilic attack. ~-Glycosylamines 92

were prepared from 2,3,4,6-protected sugars 89. This reaction followed an SN2 pathway

similar to Burgess' early disclosures.

RO

RO~-O OH RO~

OH 85

RO

RO~-O OH RO~

OR

89

2.5 eq 1

86

2.5 eq 1 l R:~ -0 0_S~~-C02R] .,.. .. <==~ -------...... RO~ II 0 OR 0

90

Figure 20-Nicolaou's synthesis of (1- and ~-glycosylamines16

While attempting the dehydration of the alcohol moiety in 93, Raghavan and co-

workers discovered that Burgess reagent reacts preferentially with sulfoxides to give

sulfilimines 95 (Figure 21).17 Initial reactions carried out at 60°C in THF gave only

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about 30 % yield. The reaction was optimized and was found to be high yielding when

performed in benzene at room temperature. By varying the alkyl component of the

Burgess reagent 98, Raghavan was able to prepare several sulfi1imines 97.

e o I

e o I

e NC02Me I

/~l P-TOl o 1, THF ... )( /~*c p-Tol l)H 1, THF /~*c p-Tol l)H 94 93

000 "II II

Et N .... S'N/'-OR 3@ e

98a-d

PhH, rt

a:R = Me b:R = Bn c:R = Allyl d:R = CH2CCI3

e NC02R I

R1-~'R2 97

Figure 21-Formation of sulfilimines from sulfoxides 17

95

Makara and co-workers treated a series of carboxylic acids with Burgess reagent

to give mixed sulfcarboxyanhydrides of type 100 (Figure 22).18 The mixed anhydrides

could then be treated with amines to form amides 101 or acyl ureas 103. Makara found

that excess 1 was required with slow reactions due to decomposition of the Burgess

reagent. The conversion of an acid to an amide or acyl urea could be completed in one

pot as long as excess Burgess reagent was destroyed to prevent the formation of

sulfamidates. This was accomplished by heating the reaction mixture to 80°C for 15

minutes before the addition of the amine. The ratio of amide to acyl urea could be

controlled by adjusting the temperature and employing microwaves as a heat source.

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1.4 eq 1, MeCN, 1.5 eq DIPEA

5 min rt then 15 min 80 DC

13.0 eq R2R3NH

80 DC (f.lW)

o

R)lNR2R3

101

150 DC (f.lW), 8 min

Figure 22-Preparation of acyl ureas and amides from carboxylic acids18

Until 2001, it was believed that the Burgess reagent was inert to epoxides. In his

review in 2000 Lamberth stated, "The compatibility of the Burgess reagent with many

functionalities, e.g. halogens, epoxides, alkenes, alkynes, aldehydes, ketones, acetals,

esters, secondary ami des, makes it an attractive technique for the introduction of C-C

double bonds into highly functionalized molecules".19 However, in 2003 Hudlicky and

co-workers showed that the Burgess reagent reacted with epoxides to form cyclic

sulfamidates. Lamberth cannot be blamed for the statement however, because several

dehydration reactions had been performed on molecules containing epoxides with

dehydration taking place preferentially to sulfamidate formation.3,20

In 2003, Hudlicky and co-workers showed that the Burgess reagent reacts with

epoxides to form five or seven membered cyclic sulfamidates.21 It was discovered that

aliphatic epoxides formed only five membered sulfamidates while benzylic epoxides

formed mostly seven membered sulfamidates with five membered sulfamidates being

produced in about 2 % (Figure 23).

- 14-

I

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[ o::x~l 00 1===0 104 o .. \

+

o

~ 106

105 10 . (assumed structure) 7, major

Figure 23-Formation of 5- and 7-membered sulfamidates from epoxides21

o '\. II 0

O-'\. 181-0

N- -

~b 75, minor

During subsequent work it was shown by Hudlicky that the five membered

sulfamidate 105 which was initially thought to have a trans-stereochemistry was actually

cis 109?2 A mechanism was proposed to account for the cis stereochemistry.22

Hudlicky's proposed mechanism requires two equivalents of Burgess reagent and is

similar to the mechanism Nicolaou proposed for the reaction of Burgess reagent with

diols (Figure 24).14

2 eq 1

104 109

Figure 24-Hudlicky's proposed mechanism for the formation of cis-cyclic sulfamidates

Hudlicky also noted that the seven membered sulfamidate 107 formed from

styrene oxide (106) was spectroscopically identical to Nicolaou's minor product (76,

page 11, Figure 18) in the reaction of Burgess reagent with styrene diol 74.14 An X-ray

crystal structure was acquired which proved that Nicolaou's minor product was indeed

seven membered sulfamidate 107.21 A mechanism with degenerate pathways that

accounts for the formation of both five and seven membered sulfamidates was proposed.

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o \I 0

o-S~ - \ 0

~N-L

76, proposed structure 107, actual structure

Figure 25-Correction of the structure of76

In another case of unexpected reactivity, Hudlicky and co-workers showed that

when treated with Burgess reagent, thiols form disulfides (Figure 26).23 Hudlicky had

been attempting to expand the scope of Burgess dehydration and urethane formation to

primary, secondary and tertiary thiols. However, when decane-l-thiol (104) was treated

with Burgess reagent under standard conditions, disulfide 105 was isolated in nearly

quantitative yield (Figure 26).

(ySH

CI~ 112

~SH

V 114

1, PhH

rt,2 hr

1, PhH

rt,2 hr

1, PhH

rt,2 hr

..

..

)Ir

CH3(CH2)gS-S(CH2)gCH3

111

~CI

(ys'sN M CI 113

115

Figure 26-Forrnation of symmetrical disulfides from thiols23

2.1.3 Variants of the Burgess reagent

Several researchers have modified the alkyl or amine portions of the Burgess

reagent for improved reaction characteristics or to incorporate different alkyl groups into

their products. The Nicolaou group prepared variants of the Burgess .reagent with

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different alkoxy groups 98a-e in their sulfamidate and sulfamide syntheses. 14-15 The

methyl, benzyl, allyl, trichloroethyl, and o-nitro benzyl versions 98a-e were employed in

the synthesis of sulfamidates and the methyl, benzyl and allyl versions 98a-c were used

in sulfamide preparation. Raghavan employed Nicolaou's new Burgess reagents 98a-d in

his preparation of sulfilimines from sulfoxides. 17

a:R = Me b:R = Bn c:R = Allyl d:R = CH2CCI3 e:R = o-N02Bn

Figure 27-Burgess reagents utilized by Nicolaou

Over the course of their studies of cyclodehydrations, the Wipf group noticed that

the Burgess reagent decomposed upon exposure to moisture and oxidative conditions and

that they obtained the best yields with freshly prepared Burgess reagent.24 To improve the

stability of the reagent, ease of handling and ease of purification of the products, Wipf

developed a poly(ethylene glycol) (PEG) (116) linked version of the Burgess reagent 118

(Figure 28). They found that yields of oxazolines and thiazolines were 10-20 % higher

when the PEG supported reagent was used in place of 1. Upon completion of the

reaction, filtration through a plug of silica often led to pure product as unreacted 118 and

by-products remained absorbed in the PEG matrix or on silica gel.

Ho~~0o~OMe) y

PEG 116

2.2 eq Et3N

Figure 28-Wipfs preparation of PEG linked Burgess reagent 118

Brain and co-workers employed Wipfs PEG supported Burgess reagenr4 in the

synthesis of 1,3,4-oxadiazoles 120 from 1,2-diacylhydrazines 119 under microwave

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conditions (Figure 29).25 Reaction times from two to four minutes under 100 W

microwave conditions were noted. Building on Brain's work, Li and Dickson developed a

one pot procedure for the synthesis of 1,3,4-oxadiazoles that proceeded in moderate to

excellent yield at room temperature.26

o 0

R)lN-NAR2

H H 119

118

~LW, THF

Figure 29-Brain's synthesis of 1,3,4-oxadiazoles with PEG supported Burgess reageneS

While looking to develop a stable and efficient sulfamoylating reagent, Montero

and co-workers developed reagent 121 (Figure 30).27 Montero had been using

chlorosulfonyl isocyanate (117) as a sulfamoylating reagent but found it was often too

reactive. In order to reduce the reactivity, they treated it with tert-butanol and then

DMAP. This led to Burgess type reagent 121. Reagent 121 was shown to be an efficient

sulfamoylating reagent giving products in moderate to high yields under mild conditions.

Figure 30-Montero's sulfamoylating reagene7

At the same time as Nicolaou was developing variants of the Burgess reagent for

the formation of sulfamidates and sulfamides 14-15 the group of Wood independently

developed the benzyl version of the Burgess reagent 98b for a one step conversion of

primary alcohols to Cbz protected amines.28

Masui and co-workers prepared a variant of the Burgess reagent by treating 117

with isopropanol and pyridine in a one pot procedure?9 The reagent could then be treated

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with dry or aqueous amines to form sulfamides (Figure 31). The advantage to Masui's

methodology was that sulfamides could be produced from aqueous amines such as

ammonia or methylamine at room temperature where traditional methods required

anhydrous amines and low temperatures (either because of the low boiling point of the

amine or exothermic reactions).

0" /9 1. i-PrOH l O~sP ~ I 1 '8' -----...... ON" 'N..A-..O~ aq or dry amine

CI/ 'N==C=O 2. pyridine ~ I ® e --'------"--......

117 122

Figure 31-Masui's one pot preparation of sulfamides29

As part of their research in synthesizing sulfamidates from epoxides the Hudlicky

group attempted to use C2 symmetric Lewis acid catalysts to form chiral sulfamidates of

type US which could then be used to access chiral amino alcohols.22 These attempts were

unsuccessful and it was rationalized that the Lewis acid and the Burgess reagent could

not coordinate simultaneously to an epoxides for steric reasons. Hudlicky then turned his

attention toward creating a chiral auxiliary version of the Burgess reagent 124. When

cyclohexene oxide (104) was treated with 124 a 1: 1 mixture of diastereomeric

sulfamidates 12Sa-b was produced (Figure 32). The mixture was separable by column

chromatography and the diastereomeric sulfamidates could be treated to form cis or

trans-amino alcohols in both enantiomeric series, the latter group of compounds

produced by the reaction of cis-sulfamidates with ammonium benzoate.3o

+ 00 104

THF, reflux .. (X0,,,,o

,S~ N

ero \

M*

125a

+

M* = menthyl

Figure 32-Reaction ofHudlicky's chiral auxiliary Burgess reagent with epoxides22

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2.1.4 Applications of the Burgess reagent in total synthesis

The Burgess reagent has proven to be very useful in synthesis as a dehydrating

agent due to its mild reaction conditions. The Burgess reagent is soluble in a wide variety

of organic solvents and many reactions can be performed at room temperature at neutral

pH. Its wide range of reactivity has led to its use in the syntheses of many complex

natural products.

The first reported use of the Burgess reagent in synthesis was by Crabbe

who reported the dehydration of several steroidal alcohols (Figure 33).31 Caspi and co­

workers also reported the dehydration of several steroidal alcohols to their corresponding

0lefIns.32

o o 1

PhH, rt, 75 %

126 127

Figure 33-Dehydration of steroidal alcohols by Burgess reagene1

Stork employed the Burgess reagent in his general method for the synthesis of

ll-oxygenated steroids (Figure 34).33-35 The Burgess reagent was used to dehydrate 128

which then underwent an intramolecular Diels-Alder reaction. By this general method,

Stork synthesized cortisone, adrenosterone, l1-ketoprogesterone, and 11-

ketotestosterone. Dehydration of 128 with Burgess reagent led to the desired Diels-Alder

precursor 129a as well as the regio-isomer 129b, which did not undergo cyclization and

was therefore easily separated from the mixture. Further transformations of 130 led to

131, which was identical to an authentic sample of silylated ll-ketotestosterone.

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1

128

131

129a major

1 intramolecular Diels-Alder

130

+

129b minor

Figure 34-Application of Burgess reagent in Stork's ketosteroid synthesis

Rigby employed the Burgess reagent as a dehydrating agent in his syntheses of

p-cedrene (134)36 and (+)-narciclasine (136) (Figure 35).37

~H 1 stf .. ~ .. .. 132 133 134

OAe OAe

TBSO". 0)( 0)( 1. F-, THF

<0 ° .. <0 ° 2. 1, PhH, reflux

° ° OAe ° OAe °

135 136

Figure 35-Rigby's use of the Burgess reagent in the syntheses of cedrene and narciclasine36-37

In the Kita group's synthesis of both enantiomers of the complex natural product

fredericamyein A (139), a key step was the dehydration of alcohol 138 (Figure 36).38 Kita

first employed an anti-elimination under acidic conditions which was successful but only

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in 51 % yield. They then attempted a Chugaev elimination which was unsuccessful. The

Burgess reagent however, gave a clean elimination in quantitative yield.

1

THF, reflux

137 138

139

Figure 36-Use of the Burgess reagent in Kita's synthesis of fredericamycin A 38

Recently, Ciufolini and co-workers have employed the Burgess reagent in their

synthetic studies toward the terpenoid core of sordarin and analogs thereof.39 Alcohol 140

was treated with Burgess reagent yielding Diels-Alder precursor 141 in 54 % (Figure 37).

However, attempts at the Diels-Alder cyclization were unsuccessful and another route

was followed.

fdiC02Me

OH

TBSO ==--

CNCN

140

1

54% ~:2Me

TBSO ==--

CNCN

141

heat )( ..

142

Figure 37-Use of the Burgess reagent in Ciufolini's studies toward the synthesis of sordarin39

Wipfs synthesis of (+)-curacin A (146) employed both the Burgess reagent (1)

and PEG supported reagent 11824 in an elegant oxazoline-thiazoline conversion (Figure

38).40-41 Deprotection of the silyl group of143 proceeded in nearly quantitative yield. The

resulting alcohol was subjected to cyclodehydration with Burgess reagent to give

oxazoline 144. Thiolysis followed by cyclodehydration with Burgess reagent (1) gave the

natural product 146. When PEG supported Burgess reagent 118 was employed In

thiazoline formation, a modest increase in yield was observed.

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OMe ~R TBSO

1. HF, pyridine, 91 % .. NH 2.1, THF, 71 % 0)J

O?v<H 143 H" "H

144

1 H,S, MeOH, Et3N, 66 %

?'" OMe ~R 1, THF, 54 %

HO NH ... N or

S?v<H S)J 118, THF, 63 %

H" "H 146 145

Figure 38-Application of Burgess cyclodehydration in the synthesis of (+)-curacin A 41

Wipf also employed Burgess cyc1odehydrations and oxazoline-thiazoline

conversions in the first total synthesis of (-)-thiangazole 42 and the complex marine natural

product lissoc1inamide 7.43 Wipfs Burgess cyc1odehydration methodology was also

employed in Ino' s synthesis of yersiniabactin 44, Wipf s syntheses of westiellamide 45 and

hennoxazole A 46, and Miller's synthesis ofthe peptide fragment ofpseudobactin.47

Raghavan and co-workers demonstrated the synthetic utility of their sulfilimine

formation methodology with benzyl Burgess reagent 98b by applying it to the total

syntheses of (-)-deoxocassine (150) and (+)-desoxoprosophylline (151).48-49 Sulfoxide

147 was treated with the benzyl Burgess reagent 98b to yield sulfilimine 148. The

sulfilimine was then used as an internal nuc1eophile to give common intermediate 149

which was transformed to natural products 150 and 151 (Figure 39).

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g8 OTBS 98b S~ ..

p-Tol/@ PhH, O°C-rt

147

149

CbzN 8 OTBS 1. TBAF, THF ~ , ~ ..

p-TOI/~~ 2. NBS, H20, PhMe

148

N~: ~~~ H H (-)-deoxocassine (150)

H

(f"OH

~~~ H OH

(+ )-desoxoprosophylline (151)

149

Figure 39-Raghavan's syntheses of (-)-deoxocassine and (+)-desoxoprosophyUine48-49

Hudlicky and co-workers employed their chiral auxiliary Burgess reagent 12422 in

an enantiodivergent formal synthesis of the fungal metabolite (+)- and (-)-balanol

(155).30,50 The key step was a regioselective opening of epoxide 152 (Figure 40).22 The

resulting diastereomeric sulfamidates 153a and 153b were separated by column

chromatography and opened with benzoate to give the trans-amino alcohol moiety. These

were then further elaborated to formal intermediates of (-)- and (+ )-balanol, 154a and

154b respectively.

+

152

OH

balanol (155)

THF, reflux )0

36 % +

M* = menthyl

~! HoD ,~-pDBO

NBn 0

154a (-)-balanol 154b (+)-balanol intermediate intermediate

Figure 40-Hudlicky's enantiodivergent fonnal synthesis ofbalano13o •

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Since its discovery the Burgess reagent (1) has been widely used for dehydration

reactions in the synthesis of complex natural products. Burgess dehydrations are usually

high yielding and side reactions are rare. Renewed interest in the Burgess reagent over

the last twenty years has led to the development of new reactions as well as new versions

of the reagent further expanding the versatility of this already useful reagent.

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2.2 Morphine

2.2.1 Historical uses, isolation, and biosynthesis

Morphine (3) has been used by humans as an analgesic, antitussant and

recreational drug for thousands of years. The first recorded use of opium was by the

Sumerians in about 3400 BC.51-52 Opium poppies (Papaver somniferum) appeared in

Egyptian artwork and the Greek and Roman gods of sleep were often depicted with

poppies. The Swiss physician Paracelsus developed a preparation of opium and other

ingredients in wine and sold it as a remedy and sleep aid. In Great Britain, several

tinctures of opium in alcohol were marketed as cough suppressants and sleep aids which

were frequently administered to children to quiet them. These remedies were sold under

names such as Street's Infants' Quietness, Atkinson's Infants' Preservative, and Mrs.

Winslow's Soothing Syrup.

The British East India company was brought back from the verge of bankruptcy

by sales of Indian opium to China. The Chinese attempted to prohibit the sales and use of

Opium in 1839. However, smugglers and American ships still supplied Indian opium to

China. In 1839, Chinese officials took several British ships hostage and confiscated over

20,000 chests (1,600 tons). This led British foreign secretary Lord Palmerston to initiate

war. The goals of the British Crown were to obtain reparations for the insults suffered by

captured British sailors and officials, to recover the lost revenue from the opium· seized

by the Chinese and assure the security of British merchants in China. The British easily

defeated the Chinese and the treaty ending the war opened up four ports to British

merchants and ceded Hong Kong to Queen Victoria. The first Opium War, however, did

not fully resolve the dispute over opium trade. Throughout the 1840's and early 1850's

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the British sought to legalize the opium trade under the pretense that the Chinese could

not regulate the illicit opium trade as effectively as the British. The second Opium war,

also known as the Arrow war, began when Chinese officials boarded the British

registered ship Arrow whose crew was accused of smuggling and piracy in 1856. The

war ended with a treaty legalizing the import oflndian opium in 1858. At the time of the

Arrow war, a strong anti-opium trade movement was growing in England. In the late

nineteenth and early twentieth century, British India became less dependent on opium

revenue and an anti-opium movement began to take hold in China. This led to a series of

reductions in opium shipment to China and in 1913, the Indian government stopped all

opium shipments to China. 52-53 While use of raw opium continues today, most illicit

opium is converted to heroin which is less bulky, thus facilitating transport.54

In 1805, the German pharmacist Serturner isolated morphine from raw opium.55-56

The name morphine comes from Morpheus, the Greek god of dreams. The structure of

morphine eluded scientists for over one hundred years and its elucidation was reviewed

by Butora and Hudlicky.57 The correct structure of morphine (Figure 41) was reported in

1925 by Robinson and Gulland58 and was confirmed by Gates when he published the first

total synthesis of morphine in 1952.59

morphine (3) thebaine (157)

Figure 41-Structure of morphine and related alkaloids

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Opium is isolated from poppies by scoring the unripe seed pods of P. somniferum

approximately 98 days after germination. The latex oozes out and is collected. A single

seed pod can be harvested several days in a roW.52 The timing of the opium harvest is

important because morphine alkaloids are produced for only a short time. As the seed pod

ripens, alkaloid production stops and the alkaloids are broken down. 52 While this method

is still used in places with more primitive farming techniques, most modern commercial

poppy farms simply harvest the entire plant which is then sold to manufacturers as opium

straw from which the alkaloids are extracted on a large scale.52 The highest concentration

of alkaloids is found in the seed pods but thebaine can be found in significant quantities

in the roots of the opium poppy.52,60

The biosynthesis of morphine and related alkaloids has been elucidated (Figure

42). All carbon atoms present come from two molecules of the naturally occurring amino

acid tyrosine (158). Nature provides an elegant solution to the synthesis of these complex

molecules that is unrivalled by even the most efficient laboratory synthesis.

In the first stage of biosynthesis, one molecule of tyrosine is converted to

dopamine (159) by the action of tyrosine decarboxylase and phenol oxidase. A second

molecule of (158) is converted to 4-hydroxyphenylacetaldehyde (160). Dopamine (159)

and 4-hydroxyphenylacetaldehyde (160) are then condensed to form (S)-norcoclaurine

(161) by the action ofnorcoclaurine synthase. Subsequent methylation and oxidation give

(S)-reticuline (162a) which is then epimerized to (R)-reticuline (162b) via the 1,2-

dehydroreticulinium ion (163). A microsome bound cytochrome P450 containing enzyme

then couples carbon atoms 12 and 13 forming salutaridinol (164).61 The ketone at the C-7

position of salutaridinol is then reduced and acetylated. The free hydroxy group on C-4

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then attacks, displacing the acetate in a SN2' reaction to give thebaine (157). Thebaine is

then demethylated by thebaine 6-0-demethylase to neopinone (165)62 which exists in an

equilibrium with codeinone (166). Reduction of the C-6 ketone by codeine reductase63-64

yields codeine (156) which is then demethylated by codeine-O-demethylase to morphine

(3).62

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~C02H

HO~ NH2

L-tyrosine (158)

Me0:(A I~

HO 12

(0'NMe ..

MeO~ OH

(R)-reticuline (162b)

1 MeO

HO

MeO

o salutaridinol (164)

HO

HO'"

(-)-morphine (3)

HO~

,-----i~ HO~ NH2

dopamine (159)

~CHO HO~

4-hydroxyphenylacetaldehyde (160)

)II

MeO

HO

HO

MeO

1,2-dehydroreticulinium ion (163)

MeO

MeO

HO'"

(-)-codeine (156)

Figure 42-Biosynthesis of morphine

..

HO

HO

HO

(S)-norcoclaurine (161)

1 MeO

HO

MeO

(S)-reticuline (162a)

MeO

0 neopinone (165)

II

o codeinone (166)

Thebaine (157) can also be converted to morphine (3) by an alternate pathway

that accounts for the formation of trace amounts of oripavine (167) found in opium

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(Figure 43).62 In this alternate pathway, thebaine is converted to oripavine by the action

of codeine-O-demethylase. Thebaine 6-0-demethylase then converts oripavine to

morphinone (168) which is in tum converted to morphine by codeine reductase.

M~~ HO~ HO~ HO~ 1.0 1.0 1.0 1.0 q Q. ~ q ~ q . 1 NMe ~ '. 1 NMe . NMe . NMe

MeO ::::,... MeO ::::,... o .0 HO"> .0 thebaine (157) oripavine (167) morphinone (168) (-)-morphine (3)

Figure 43-Altemate pathway for the conversion of thebaine to morphine62

2.2.2 Notable syntheses of morphine

Gates (1952i9

Gates published the first total synthesis of morphine (3) in 1952 thus confirming

the structure proposed by Robinson and Gulland twenty seven years earlier. 58 Gates

prepared both enantiomers of morphine via a resolution of intermediate 176. Gates'

synthesis was achieved in twenty four steps from 2,6-dihydroxynapthalene (169) with an

overall yield of 0.01 %. As shown in Figure 44, an iterative nitrosation / reduction /

oxidation procedure was used to transform 2,6-dihydroxynapthalene (169) into

intermediate 172. The nitrogen atom was installed by a Michael type addition of ethyl

cyanoacetate to 172. This was followed by base hydrolysis and decarboxylation to give

173. The C-ring of the morphine skeleton was installed by a Diels-Alder reaction

between 173 and butadiene. The D-ring was completed by a reductive cyclization

yielding keto-Iactam 175. Reduction of 175 followed by methylation of the nitrogen atom

gave 176 which contains all of the carbon atoms in morphine. At this stage a resolution

was performed by crystallization of the tartrate salts of 176. The C-6 position was

hydroxylated in dilute sulfuric acid. Treatment with potassium hydroxide led to the

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demethylation of the ether at C-4. The C-6 hydroxyl group was then oxidized to ketone

177.

HO~

~OH 169

MeO

MeO

174

27 atm H2 150 DC lEtOH

CuO/Cr20 50%

MeO

1. BzCI 2. NaN02

3. Pd/C 4. FeCI3 56%

)Iro

HOAc, heat 50%

BZOW"-'::: 1. S02 BZOW"-'::: "-'::: I )Iro.o .0

.0 0 2. (MeOhS02 OMe 170 0 78% 171 OMe

1. KOH 13. Pd/C 2. NaN02 4. FeCI3

69% o

OW 1. NC""C02Et wO

~ I .0 OMe ...... I---N-Et-3-- 0 ~ I ~ 2. K3FeCN6 .......... // OMe

NC OMe 3. KOH, EtOH 172 OMe 173 82%

MeO

MeO o 1. N2H4/KOH MeO ---=----'-----J)Iro~

175

2. Mel/NaH NH 3. LAH

76% NMe 2. KOH,

"'H (HOCH2CH2hO 3. KOt-Bu/Ph2CO

176 14% 177

Figure 44-Gates' synthesis of intermediate 17759

After the tartrate resolution of 176, the stereochemistry was correct at positions

C-9 and C-13 but epimeric at C-14. Compound 177 was treated with bromine in acetic

acid. Elimination of HBr gave an a,~-unsaturated ketone which was converted to its

hydrazone 179a. Hydrazone 179a then equilibrated to the more stable cis fused ring

system 179b (Figure 45).

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MeO

2,4 DNP HO

AcOH ..

177 Br 178 ArHNN

11 MeO MeO

HO "

Hel HO

ArHNN ArHNHN 181 180

Figure 45-C-14 epimerization59

After the epimerization at C-14 was complete, hydrogenation of a.,~-unsaturated

ketone 181 gave the precursor for the closure of the C-4,C-5 dihydrobenzofuran ring 182.

Repetition of the conditions for the epimerization of C-14 allowed for the closure of the

furan ring and installed the C-7, C-8 unsaturation. Acid hydrolysis of phenylhydrazone

183 followed by reduction with lithium aluminum hydride gave codeine (156) in 27 %

over two steps. Demethylation using Rappoport's conditions65 gave morphine (3) in 35 %

yield (Figure 46).

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MeO

1. Br2. AcOH )Ir

2.2,4 DNP 26%

ArHNN 182

1 Hel Acetone

HO MeO MeO Br

Py-HCI 1. LAH oil[

34% 2. H2. Pd/C

HO'" HO'" 0 (-)-morphine (3) codeine (156) 184

Figure 46-Final transformations in Gates' synthesis of morphine59

Rice 198066

Rice's formal synthesis of morphine (3) in 1980 is noteworthy as it is the shortest

and the highest yielding synthesis to date. Rice's synthesis allows for the synthesis of

both the natural and unnatural enantiomers of hydrocodone. The route is biomimetic and

involves the isolation of only six intermediates, requires no chromatography and the final

yield of formal intermediate hydrocodone (185) is an amazing 29 %.

The synthesis begins with the condensation of amine 186 and acid 187 followed

by a Bischler-Napieralski reaction to give 188. Intermediate 188 was then resolved with

(8)-(-)-a-methylbezyl isocyanate. Birch reduction of the more electron deficient aromatic

ring followed by formylation, protection and bromination gave cyclization precursor 190.

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Meo~

V NH2 +

186

MeO

1. 200°C (95 %) 2. POCI3, MeCN HO .. 3. NaCNBH4 (86 %)

MeO

1. ethylene glycol, MeS03H, THF .... 2. NBA88 %

Figure 47-Rice's synthesis of cyc1ization precursor 190

MeO

HO

MeO

188

1. Li, NH3, THF, tBuOH (90 %)

2.PhOCHO, EtOH (94 %)

189

Hydrolysis of 190 with formic acid followed by a hydrogen fluoride mediated

Grewe-type cyclization gave the skeleton of morphine in 60 % yield. Acid hydrolysis of

formamide 191 gave l-bromo-nordihydro-thebainone (192). I-Bromo-nordihydro-

thebainone (192) was then converted to hydrocodone (185) by a four step sequence that

proceeded in 79 % yield. The bromine at C-l was removed by hydrogenation, the

dihydrobenzofuran ring was closed by alpha bromination of the ketone and base-induced

ring closure. Removal of the aryl bromide and methylation of the nitrogen atom were

achieved by hydrogenation over palladium on carbon in the presence of acetic acid and

formaldehyde. When 192 was subjected to hydrogenation without the addition of

formaldehyde, norhydrocodone (193) was isolated.

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Meo&~ Sr

HO b

NH

o 192

Meo~~ Sr

HO b

NH

o 192

1. HC02H, H20, (90 %)

2. NH4F, HF, CF3S03H, (60 %)

)Do

Meo~~ Sr

HO b

NCHO

o

(92%)

Meo~~ Sr

HCI, MeOH HO b -~---i"'~

NH

o 192

1. H2, Pd/C, AcOH, HCHO 2. Sr2, AcOH

3. NaOH, CHCI3 4. H2, Pd/C, AcOH, HCHO

1. H2, Pd/C, AcOH, HCHO 2. Sr2, AcOH

3. NaOH, CHCI3 4. H2, Pd/C, AcOH

191

Meo~ 'b q

". NMe

o 185

Meo~ 'b 0,

'. NH

o 193

Figure 48-Final transformations in Rice's formal synthesis of morphine

Hudlicky 200967

Hudlicky's 2009 enantiodivergent synthesis of codeine (156) is based in part on

Parker's strategy used in the synthesis of morphine68-69 and employs a Heck coupling

similar to Trost's synthesis.70-71 Hudlicky's synthesis (Figure 49) begins with the

enzymatic dihydroxylation of p-bromoethyl benzene (194) to diol 195. Diol 195 was

subjected to diimide reduction and the hydroxyl groups were acetate protected. Protected

diol 196 was treated with methylamine and potassium carbonate to give a secondary

amine which was protected as a Boc carbamate 197 without purification. The distal

hydroxyl group was protected as a silyl ether. A Mitsunobu reaction between alcohol 198

and bromoisovanillin (199) gave intermediate 200 which was the substrate for the first

Heck reaction.

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E. coli JM109 (pDTG601)

10 gIl

194

/OYil ~O

o Br

~NMeBOC TBSO"'U

200

I ° /O~ HO:::::"" ..-::

Br 199

198

1. PAD, AcOH/MeOH 60 % .. 2. AO£O, Et3N, DMAP, 79%

Figure 49-Hudlicky's synthesis of intermediate 20067

197

The intramolecular Heck reaction gave cyclized product 201 in 82 % yield. A

Wittig reaction was used to convert the aldehyde to a vinyl bromide. Bromide 202 was

subjected to a second intramolecular Heck reaction to complete the phenanthrene core of

codeine. The C-6 stereochemistry was inverted by a desilylation followed by an

oxidation/reduction procedure. Deprotection of the Boc carbamate gave 204, the

enantiomer of Trost's intermediate.7o Hudlicky attempted to repeat Trost's

hydroamination procedure but was unsuccessful. To convert Trost's intermediate to

codeine, Hudlicky used an oxymercuration procedure which gave ent-156 in 18 % yield

(Figure 50).

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/O~ ::::,.. I ...,;0 Pd(OAc)2, A92C03

o Br .. 0

'-'::: NMeBoc 82 %

PPh3CH2Br2, t-BuOK

"'\ .. 0 . NM B THF, -60 cC, 49 % I e oc X)1 dppf, PhMe, 110 cC,

TB80'" TB80'" 200 201

TB80'" 202

/O~ /O~ I 1 TFNDCM (1 '4) I 1. TBAF, THF ::::,.. 88 % "::::,.. ... 2. IBX, DMF

o .",-~ -; H (OA) Et N 0 .",-""\ 3. NaBH4' CoCI3 H20, " 'NMe . g. C 2, ~ " NMeBoc MeOH 'H then LIAIH4 (18 Yo) 'H 72 % over 3 steps .

HO h- HO h- TB80" ent-1S6 204

Figure 50-Hudlicky's transformation of200 to ent-codeine67

j Pd(OAch, A92C03, dppp, PhMe, 107 cC, 44 %

203

Originally, Hudlicky's strategy for the synthesis of the natural isomer of codeine

was to perform two sequential Mitsunobu reactions despite low yields in a similar

sequence.72 The first Mitsunobu reaction would invert the C-5 stereochemistry and the

second reaction would invert again and couple the A-ring fragment (199). This strategy

was found to be very low yielding so an alternate path was taken. Hudlicky performed a

Mitsunobu reaction on 197 using Banwell' s procedure.73 The distal hydroxyl group was

then converted to tosylate 206. Hydrolysis of the ester, followed by displacement of the

tosylate, gave epoxide 207. The epoxide was then opened with the potassium salt of

bromoisovanillin (208). The hydroxyl group was protected as a silyl ether to give the

enantiomer of 200. The procedure shown in Figure 50 was then followed to convert

ent-200 to the natural isomer of codeine (156) (Figure 51). Hudlicky's 2009 synthesis is

noteworthy in that it can be used to synthesize both the natural and unnatural isomers

from a single starting material without a resolution. This overcomes one of the criticisms

of the use of enzymatic reactions to produce synthons in that only one enantiomer is

- 38 -

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produced thus limiting chemists to the synthesis of only one enantiomer of a natural

product.

NMeBoc

DIAD, PPh3, THF .. &OPN02

82

197

/0Y') ~O

Q Br

~NMe80C HO 209

1 TBSCI, imidazole, DCM, 61 %

/0Y') ~O

Q Br

;"""~NMeBoc

TBsoN

OH 205

/O~ I 0 KO ~ h

Br 208

DME/DMF (1:1), 18-crown-6, 75 %

HO'"

TsCI, Et3N, DMAP .. DCM, 73 %

207

NMe

ent-200 (-)-codeine (156)

NMeBoc

&OPN0282

OTs 206

1 NaOMe, MeOH, THF, 88 %

J~e8OC 0·,(0

207

Figure 51-Hudlicky's synthesis of the natural enantiomer of codeine67

Chida 200874

Chida's formal synthesis of morphine employed a cascade lohnson-Claisen

rearrangement to set the C-13 quaternary center. The Claisen rearrangement was

catalyzed by 2-nitrophenol and is similar to a rearrangement he employed in his synthesis

of the Amaryllidaceae alkaloid galanthamine.75

Chida's synthesis begins with tri-O-acetyl-D-glucal (210) which is deacetylated

and reprotected in a sequence with a yield of 45 % over three steps. Cleavage of the

- 39-

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I

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p-anisaldehyde acetal and replacement of the alcohol gave iodide 212. Elimination of the

iodide to an olefin gave the substrate for a Ferrier's carbocyc1ization, 213. The

cyc1ization was followed by ~-e1imination to give cyc1ohexenone 214 and proceeded in

91 %. L-Se1ectride® was employed for a 1,4 reduction and the resulting enolate was

trapped as a vinyl triflate 215. Suzuki coupling to A-ring fragment 8 and subsequent

deprotection gave Claisen rearrangement substrate 218.

1. NaOMe, MeOH CH20Ac

ACO".~~ 2. p-anisaldehyde dimethylacetal PPTS, DMF

PMP".S)0

0". 0

ACoN 210

3. TBSCI, imidazole, DMF

1. L -Selectride

,.. TBSO .0

211

OTt

PMBOD 2. Com in's reagent

o PMBO".))

TBsoN 214

TBSO 215

'0.0 aq Na2C03 /0:Q"-'::: j Pd(OAch, Ph3P

1,4 dioxane 8 B(OHh

::~: PMBO". "-'::: DCM/H20

TBSO

DDQ

216

/O~ I '0 .0

HO". "-':::

TBSO

TBAF

THF

217

1. DIBAL, PhMe 2. Ph3PHBr, MeOH NaBr, DME

3. 12, imidazole, Ph3P, THF

1. Hg(OCOCF3), (20 mol%), acetonel acetate buffer

2. MsCI, Et3N, DMAP, DCM

/O~ I '0 ..0

HO". "-':::

HO 218

Figure 52-Chida's synthesis of intermediate 218

I

PMBO" i~ TBSOUoMe

212

!t-BUOK THF

PMBO',.~O TBsoMoMe

213

A cascade Claisen rearrangement was used to set the stereochemistry at both C-13

and C-14. The cascade rearrangement proceeded in 36 % yield. A sequential

rearrangement from 217 was also explored.

- 40-

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/0

'0

HO

2-nitrophenol (150 mol%)

JIIr triethylorthoacetate

(36 %)

218 219

222

EtC02H (45 mol%) '0 JIIr

triethylorthoacetate (87 %)

TBSO

2-nitrophenol (5 mol%)

221

JIIr triethylorthoacetate

(57 %)

C02Et

TBAF JIIr

C02Et THF (97 %)

/0

'0

220

/0

'0 JIIr

/0

'0

HO

220

222

Figure 53-Chida's cascade and sequential Johnson-Claisen rearrangements 74

C02Et

Following the Claisen rearrangement, the furan ring was completed by

epoxidation of the olefin and subsequent intramolecular nucleophilic opening of the

epoxide. Protection of the alcohol followed by reduction of the ethyl esters gave a

dialdehyde. Friedel-Crafts closure of the B-ring followed by dehydration gave a mixture

of 224a-b. The mixture was subjected to silylation conditions to give 224a. A reductive

amination sequence gave (-)-dihydroisocodeine (227). Spectroscopic data for tosylamide

226 and dihydroisocodeine was matched to that reported by Parker. 69

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"""'O~ ....... I ~ 1. mCPBA, DCM, (74 %) o C~B ~

CO Et 2. TBSCI, Imidazole, I 2 DMF, (99 %)

"""'O~ I ~ 1. DIBAL (2 eq) C02Et ~

Q, CO Et 2. Montmorillonite . 2 K10

TBSO 220 223

"""'O~ I~ Q,. ICHO

RO 224a,b a:R= TBS b:R= H

TBSOTf, DCM, 2,6-Lutidine

(75 % over 3 steps)

~ O~ O~ ....... I -.;;:::: 1. MeNH2, MeNH3CI,""'" 1-';;::::

THF, then LiBH4 ~ ~ ~

o I CHO 2. TsCI, DMAP, 0 I ". pyridine ". NMe

3.TBAF,THF +s TBSO (86 % over 3 steps) HO

Li, t-BuOH """'O~: ..

225 226

Figure 54-Final steps in Chida's formal synthesis ofmorphine74

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2.3 Microbial Oxidation of Arenes

2.3.1 llistory of microbial oxidation of arenes

The metabolism of arenes by soil bacteria was first reported by Stormer in 1908.

In 1968, Gibson and co-workers reported that a strain of Pseudomonas putida grew on

toluene as its sole carbon source.76-77 Cell extracts from this organism oxidized benzene,

toluene and ethyl benzene at equal rates. Propylbenzene and butylbenzene were

metabolized slowly while benzenes with larger substituents (pentyl, heptyl, octyl) were

not oxidized. Cell extracts were incubated with proposed intermediates for the

degradation of benzene. Phenol and trans-dihydrobenzene glycol were metabolized at a

much slower rate than catechol and cis-dihydrobenzeneglycoL When cell extracts were

incubated in the presence of benzene (228), catechol (231), and cis-dihydrobenzene

glycol (230), catechol was observed to be the only product. This led Gibson to propose

the mechanism shown in Figure 55 for the oxidation of benzene to catechoL

01" Cfl dioxygenase [ 0:9 ] ~ .. (X0H ~ V .. ~ 0 ~ OH

dihydrocatechol o:~ OH dehydrogenase ..

o OH

228 229 230 231

Figure 55-Gibson's proposed mechanism for diol and catechol formation by P. putida 76

Incubation of P. putida with p-chlorotoluene (232) yielded two metabolites

(+ )-cis-4-chloro-2,3-dihydroxy-l-methylcyclohexa-4,6-diene (233) and 4-chloro-2,3-

dihydroxy-l-methylbenzene (234),77 providing further evidence of a cis-dihydrodiol

intermediate in the metabolism of aromatic substrates (Figure 56).

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¢ CI

232

P. putida 391D .. ¢::: CI

233

+ (vOH ~OH

CI 234

Figure 56-Metabolism ofp-chlorotoluene by P. putida77

180 labeled oxygen was used to confirm that the hydroxyl groups of the catechols

originated in molecular oxygen.78 A mutant strain of P. putida was isolated that did not

have the requisite enzymes to process cis-cyc1ohexadiene diols.79 This allowed for the

isolation of several diols in sufficient quantity for stereochemical proof.

Gibson was able to isolate (+ )-cis-2,3-dihydroxy-l-methyl-4,6-cyc1ohexadiene

(236) produced by the action of the enzyme toluene dioxygenase and confirmed the

relative stereochemistry was indeed cis.79 Determination of a cis relationship between

the hydroxyl groups could not be established by NMR analysis of the free diol. In order

to get a clearer picture of the relationship of the two hydroxyl groups, a more rigid

structure was needed.79 Diol 236 was protected as a diacetate and condensed with maleic

anhydride. The resulting Diels-Alder adduct 237 was then hydrogenated and the fully

saturated tricycle 238 was analyzed by NMR spectroscopy to prove the cis relationship

(Figure 57). The relative and absolute stereochemistry were later confirmed by X-ray

diffraction. 80

235

o ::

Cc 0»

' OAc OH 1. AC20

P. putida 39/" ~ JO

~ OH 2. maleic OAc anhydride 0

236 237

Pd/C °M~ ~a OAc ----JO~ 0

H2 ~bOAc o

238 Figure 57-Proof of relative stereochemistry of P. putida metabolites79

Proof of the absolute stereochemistry of 236 was published by Gibson in 1973.81

Hydrogenation of the diol yielded diastereomeric diols 239a-b that were. separable as

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their monobenzoates. Dio1239b was then oxidized with Jones reagent to (-)-2-(R)-adipic

acid (240) which proved the absolute stereochemistry was lS,2R (Figure 58).

1. H2 Pd -

HO~OH Ce°H 2. BzCI ex:: C( Jones oxidation )Do + 3. separation .-

~ OH 4. hydrolysis OH 0 236 239a 239b (R)-(-)-methyladipic acid

(240) Figure 58-Proof of absolute stereochemistry of P. pUlida metabolite 23681

2.3.2 Isolation and characterization of toluene dioxygenase (TDO)

In 1977, Gibson was able to isolate the enzyme responsible for the oxidation of

aromatic compounds to cis-diene diols. He named this enzyme toluene dioxygenase or

TDO.82 TDO was discovered to be a three component enzyme composed of a

flavoprotein and two non-heme iron containing proteins. These proteins required

electrons from NADH. Further study led to a reliable purification method.83

Through the study of mutant strains of P. putida, Gibson and Zylstra were able to

determine the nucleotide sequence of the genes encoding TDO.84 The genes were then

expressed in a strain of E. coli JM109(pDTG601). The use of E. coli for

biotransformations of aromatic compounds has many advantages over mutant P. putida

strains. E. coli has been studied very thoroughly and its growth conditions have been well

optimized. P. putida requires an aromatic inducer to express TDO, usually toluene or

chlorobenzene. Because the inducer is also a substrate, it must be separated from the

metabolite. The recombinant organism, however, uses ~-isopropylthiogalactopyranoside

(IPTG) as an inducer. The plasmid incorporated into E. coli also contains multiple copies

of the genes responsible for TDO allowing much greater expression and thus higher

yields of diols.

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2.3.3 Substrate scope and specificity

Dihydroxylations by TDO have been found to occur in a fairly predictable manner

with respect to regio-, stereo-, and enantioselectivity. After screening a number of

1,4-disubstituted benzenes, Boyd developed a model to account for and predict the regio­

and stereo selectivity ofTDO oxidations.85 According to Boyd's model, dihydroxylations

proceed as shown in Figure 59. When the difference in relative size between the two

substituents (S and L) is greater, the diol is obtained in higher er.

OH

OH

Figure 59-Boyd's model for the prediction of stereoselectivity of TDO dihydroxylations85

Boyd later expanded his model to include larger, more conformationally flexible

substituents 86-87 and determined the absolute stereochemistry of the metabolites reported

in his 1993 publication.88 Boyd's model has also proven to be fairly accurate at prediction

the regio- and stereochemistry of ortho- and meta- as well as para'- substitution on

benzene rings (Figure 60).89

TDO. OH

OH

Figure 60-Boyd's expanded model for the stereoselectivity ofTDO dihydroxylations89

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Benzenes substituted with charged or very polar functional groups are often not

metabolized.89 These substituents include phenols, sulfoxides and sulfones, carboxylic

acids and amines. When these substrates are metabolized it is usually through pathways

other than TDO. Nitrobenzene was originally thought to be among the substrates not

metabolized by TDO but was later shown to be metabolized to a diol which was then

degraded by other enzymes present in the bacterial cells.90-91

An ongoing component of the research program in the Hudlicky group is the

isolation and structural determination of new metabolites ofTDO. In 1992, Hudlicky and

co-workers isolated several metabolites derived from ortho-chlorostyrene (241).92 This

was followed a year later by a similar study on ortho-bromostyrene (242).93 Oxidation of

these substrates led to mixtures of products, as shown in Figure 61.

Br .... tAOH U OH

246 (1)

;)

0 OH

Br '-':::

I~ 247 (4)

P. putida 39/D III(

242, x=Br

P. putida 391D )II

241, x=CI

Figure 61-0xidation of o-halostyrenes by TDO (ratio )92-93

CI ... tAOH U OH

243 (1)

;SOH

CI '-':::

I~ 244 (1.8)

CI

~OH U OH

245 (trace)

Recently, Hudlicky and co-workers tested several benzoate esters 248 as possible

substrates of TDO.94 Methyl, ethyl, n-Pr, i-Pr, n-Bu, t-Bu, allyl, and propargyl benzoate

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esters were tested as substrates to determine the role of steric bulk in oxidation by TDO.

Methyl, ethyl, allyl and prop argyl benzoate were all metabolized and their corresponding

diols were isolated in approximately I giL yield. The diols resulting from the oxidation of

n-Pr and i-Pr benzoate were isolated in trace amounts. n-Bu and t-Bu benzoate were not

metabolized.

°OOR ~I ~

248

E. coli JM109(pDTG601) .. R = Me, Et, allyl, propargyl, n-Pr, i-Pr

02XOR

~ OH

~ OH 249

Figure 62-Metabolism of benzoate esters by TD094

2.3.4 Use of microbial oxidation in synthesis

There are over 400 known metabolites of TDO, however, relatively few have

been exploited in synthesis. The majority of TDO metabolites used in synthesis are the

diols derived from benzene, toluene and monosubstituted halobenzenes.95

The first use of cis-dihydrodiols was a preparation of polyphenylene (251)

reported by researchers at Imperial Chemical Industries (lCI) in 1983.96 Diol 230 was

derivatized as a carbamate or ester 250 and then heated to initialize the formation of

polyphenylene (Figure 63).

(X0H

~ OH

230 251

Figure 63-Preparation of polyphenylene from 230

The first application of a TDO metabilite in natural product synthesis was

reported by Ley and co-workers in the racemic synthesis of (±)-pinitol (255) in 1987

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(Figure 64).97 Ley's synthesis began with diol 230 which was protected as its benzoate

252. Treatment with mCPBA gave a diastereomeric mixture of epoxides 253a-b in 14 %

and 73 % respectively. Epoxide 253b was opened with methanol in camphorsulfonic acid

(CSA) to give 254 in 88 % yield. Dihydroxylation with osmium tetroxide followed by

deprotection gave (±)-pinitol.

(X0H

~ OH 230

C:;", OBz

(XOBZ 253b

BzCI, DMAP, .. pyridine

MeOH

(+)-CSA

(X0BZ

~ OBz 252

mCPBA, DCE .. phosphate buffer

pH 8

(x0BZ +

253a OBz

0, (:(BZ 253b OBz

QH Me0yY0Bz

~OBZ 254

1. OS04, NMO tBuOH/TH F IH20 (10:3:1) ..

2. Et3N/MeOH/H20 (1:5:1)

Figure 64-Ley's synthesis of (±) pinito197

OH

Me0yYoH

HO"'~OH OH

(±)-pinitol (255)

The fIrst use of diols by the Hudlicky group involved the preparation of

prostaglandin synthon 259 in 1989.98 This synthesis was the fIrst example of an

enantioselective synthesis using diols (Figure 65). The diol resulting from the oxidation

of toluene was protected as its acetonide 256 and then subjected to ozonolysis.

Hemiacetal 257 was then carefully dehydrated on neutral alumina to 258 which can be

transformed to prostaglandin E2a 260 by the method of Johnson and Penning.99

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235

1. P. putida 39/D )10

2. DMP, TsOH

Neutral Alumina )10

DME, reflux [ ::XJ< 1 258

o

CC>< o 259

[ ~ 1 O~,O>< HO 257 0

o Neutral Alumina

DME, reflux CC>< o 259

o

"\\~C02H .0

-OH

260

Figure 65-Hudlicky's synthesis of prostaglandin synthon 25998

Hudlicky and co-workers have shown that diols are extremely useful starting

materials in the synthesis of terpeneslOO-lOl, sugars 102-103, pseudosugars, 104 cyclitols

105, aza-sugars 106, sphingosines 107-108, and alkaloids of the pyrrolizidine109,

amaryllidaceaellO-1l8, and morphine67,1l9-120 families.

Several landmark syntheses, including syntheses of conduritols121 ,

Amaryllidaceae alkaloidsllO-lll ,ll3, heliotridanes109, and triquinanes122

, are shown in

Figure 66. Several recent reviews contain more exhaustive lists of syntheses

employing microbial dihydroxylation.89,95,123-125

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Starting material Product Author (year) Reference number

9H OH

(X0H HOCOH Ho"·6··,OH

~ OH ~ ·"OH Ley (1990) 121

~ OH

230 (+)- and (-)-conduritol F (263)

9H

Br <o~:: C(" Hudlicky (1992) 110

~ OH o h- NH

12 0

Iycoricidine (264)

CI HilioH HO H rOH ((H HO"·· HOO Hudlicky (1990) 109

N N

~ OH (+)- and (-)-trihydroxyheliotridane (265)

261

9H

~OH Br

((" (0 I ~ .: OH Hudlicky (1995) 111

~ OH o h- NH

12 OH 0 pancratistatin (266)

9H

Br t~:: nOH Hudlicky (1999) 113

Br ~ OH o h- NH

262 OH 0 narciclasine (267)

C(" ~ Banwell (2004) 122

~ OH H

236 (-)-hirsutene (268)

Figure 66-Landmark syntheses employing microbial dihydroxylation95

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2.4 Claisen rearrangement

In 1912, Ludwig Claisen reported a [3,3] sigmatropic rearrangement of allyl vinyl

ethers or their nitrogen or sulfur analogs 269.126 In his seminal disclosure, Claisen

described the transformation of phenyl allyl ether (271) to 2-allylphenol (273) and the

transformation of O-allylated acetoacetate (274) to its C-allyl isomer 275 (Figure 67).

The Claisen rearrangement quickly became a widely used reaction in organic synthesis.

l 6 heat

271

x~

V heat

269 x = 0, N, S

272

heat

() 270

273

yC02Et 275

Figure 67-The Claisen rearrangement

The Claisen rearrangement is generally thought to proceed through a chair- or

boat-like transition state (277 or 279 respectively) (Figure 68).127 Early kinetic studies of

the Claisen rearrangement of allyl vinyl ether (276), the simplest structure that can

undergo Claisen rearrangement, were performed by Schuler who found the kinetics to be

first order and the energy of activation to be 30.6 kcallmol.128 Since the rearrangement is

highly exothermic, the Hammond-Leffler postulateI29-130 predicts that the transition state

is closer in character to the starting material than the product. l3l Gajewski and

McMichael published kinetic isotope studies back to back and both detenhined that the

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transition state had a certain amount of radical character. l3l-132 However, there is still

some disagreement on the exact nature of the transition state.133

/f.-.-:q 0

-... [ b::(f ] -... ;;;:--g 276 277 278

~~ ---... [~~)l ---... \\--} 0 '---0' 0

276 279 278

Figure 68-Chair and boat transition states for the Claisen rearrangement

2.4.1 Variations of the Claisen rearrangement

In the ninety-eight years since the discovery of the Claisen rearrangement there

has been many variations of the rearrangement published. Martin Castro provided an

excellent overview of the variations of the Claisen rearrangement in her 2004 review. 134

In 1973, Baldwin reported the Claisen rearrangements of zinc enolates 281

dubbed the Reformatskii-Claisen rearrangement. 135 The Reformatskii-Claisen

rearrangement proceeds under neutral conditions. Lang reported a variation of the

Reformatskii-Claisen rearrangement of chlorodifluoroacetates 283 in the presence of

chlorotrimethylsilane (Figure 69).136

0 [5Br

]

OlnBr

Br~o In dust 6 .. .. 0 PhH, heat

280 281 282

0 [ OSiMe,] OH

CIF2CA O In, Me3SiCI

FCAO F2CA O .. .. 0 PhH, heat 20 V 283 284 285

Figure 69-The Refonnatskii-Claisen rearrangement135-136

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Because of the greater thermodynamic stability of the C-O double bond relative to

the C-C double bond, Claisen rearrangements are usually irreversible. However,

retro-Claisen rearrangements can occur if the reaction reduces strain in the molecule.

Boeckman showed that bridged bicyclic systems 286 will undergo retro-Claisen

rearrangements to reduce torsional strain at the bridgehead 137 and Rhoads performed

retro-Claisen rearrangements on vinylcyclopropane carboxaldehydes 288 (Figure 70).138

While Rhoads referred to the conversion of 288 to 289 a retro-Claisen rearrangement, it

is really an oxodivinyl Cope rearrangement.

H

--'W H C02CH3

287

Hi) o o ... .. 288 289

Figure 70-The retro-Claisen rearrangement137-138

In 1972, Ireland reported the Claisen rearrangement of the lithium enolates of

allyl esters 291 and the trimethylsilyl enolates of allyl esters 293 (Figure 71 ).139 These

reactions proceeded at low temperatures and often without the formation of side products.

Stereoselective enolate formation can be employed to control the stereochemistry of

Ireland-Claisen rearrangements. 140

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o 0y ° 290

[~]~ !TMSCI H~

[Q]/ 2~2 OTMS

293

Figure 71-The Ireland-Claisen rearrangement

In 1994, Uli Kazmaier reported a variation of the Ireland-Claisen rearrangement

(often referred to as the Kazmaier-Claisen rearrangement) that used a metal to chelate the

enolate formed by the deprotonation of an ester (Figure 72).141-142 This method was

applied to the synthesis of several unnatural amino acids of type 297. The

Kazmaier-Claisen rearrangement proceeds through a boat-like transition state 295 rather

than a chair-like transition state 296 and is often highly diastereoselective.142 The use of a

chelating agent allows for reactions at higher temperatures than Ireland-Claisen

rearrangements as the chelated enolates are much more stable than lithium enolates.

o o

O~NHPG LDA, ZnCI2

THF

294

PG = Boc L = coordinating solvent

~~~ PG ,L ! " N::'--Zn ';' / "L :L'---:y--o

o 295 chair

~c:s:J , , L Nft:: \ /: l ,!--I /Zn--......eG 0

L.: 0 296 boat

Figure 72-The Kazmaier-Claisen rearrangement

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10hnson described the Claisen rearrangement of allylic alcohols in an excess of

triethyl orthoacetate (298) and a catalytic amount of acid, usually propionic acid. 143

Under acidic conditions, triethyl orthoacetate loses ethanol to form ketene diethyl acetal

(299). An allylic alcohol 300 adds to ketene diethyl acetal and then undergoes another

loss of ethanol to generate a mixed ketene acetal 302. The mixed acetal then rapidly

undergoes a [3,3] sigmatropic rearrangement (Figure 73). The 10hnson-Claisen

rearrangement is advantageous because only one operation is required as opposed to

vinyl ether formation followed by pyrolysis. Daub reported 10hnson-Claisen

rearrangements with trimethyl orthoacetate.144 McGeary and Cosgrove developed a

method of generating mixed orthoesters and and a triisobutylaluminum catalyzed

10hnson-Claisen rearrangement that proceeds at room temperature.145-146

301

[ OEt 1

~OEt 299

302

Figure 73-The Johnson-Claisen rearrangement143

rlI'R1 EtOAO ~R2

303

There have been several other variations of the Claisen rearrangement published

including chiral auxiliary and catalytic reactions. Variants of the Claisen· rearrangement

not covered here and several syntheses employing Claisen rearrangements are covered in

Martin Castro's review. 134

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2.4.2 Use of the Claisen rearrangement in organic synthesis

The Claisen rearrangement has also been featured in the synthesis of many

complex natural products including Ireland's synthesis of lasalocid A147, Paquette's

synthesis of basmane diterpenesl48, Kim's synthesis of pancratistatin149 and

Mioskowski's synthesis of halomon. 150

The Claisen rearrangement has been used extensively by the Hudlicky group. A

Johnson-Claisen rearrangement is featured in Hudlicky's general method for the

preparation of linear and non-linear triquinanes (Figure 74).151 In the synthesis of linear

triquinanes 307a, a vinyl unit is added to the carbonyl of 304 and the Johnson-Claisen

rearrangement takes place on the less substituted olefin to give (306a). To synthesize

non-linear triquinanes 307b, an alkynyl unit is added to the carbonyl of 304 and the

cyclic olefin participates in the rearrangement to give 306b.

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linear triquinanes 307a

«/ ~H~

305b TMS

1

306b II 1 1MS

stfo non-linear triquinanes 307b

Figure 74-Hudlicky's general method for the synthesis oflinear and non-linear triquinanes151

In 1997, Hudlicky reported the synthesis of several unnatural amino acids 310a-d,

and 31la-d.152 The key step of the synthesis was a Kazmaier-Claisen rearrangement of

309a-d to 310a-d and 31la-d (Figure 75). This sequence is the basis for our synthesis of

the C-ring of morphine (3) described in this thesis.

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R R 0 ex 1. diimide ex II NHBoc R C02H R C02H ~ OH 2. TDSCI, imidazole O~ L ( ) cr (( ______ .... ~ DA, 2.2 eq ., ::::,... 3. Boc-Gly, DCC ZnCI2 (1.2 e9).. ~ NHBoc + ~ 'NHBoc

308 OH OTDS TDSO'" TDSO'"

a: R = Ph 309 310 311

b: R= Me c: R=CI d: R = o-melhoxyphenyl

Figure 75-Hudlicky's preparation of unnatural amino acids via a Kazmaier-Claisen rearrangement

Chida's synthesis of morphine (3), described in section 2.2.2 employed a cascade

lohnson-Claisen rearrangement as the key step that set the stereochemistry at the C-13

quaternary center and at C-14. The cascade Claisen rearrangement of 218 to 220

proceeded in 36 %. A stepwise procedure starting from protected diol 217 gave the

rearranged product in 48 % yield over three steps (Figure 76).

218

222

2-nitrophenol (150 mol%) ,.

triethylorthoacetate 36%

....... 0

EtC02H (45 mol%) '0 ,. triethylorthoacetate

87%

TBSO

2-nitrophenol (5 mol%)

221

,. triethylorthoacetate

57%

TBAF C02Et THF (97 %)

....... 0

'0

220

Figure 76-Chida's cascade and sequential Iohnson-Claisen rearrangements

220

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3. Discussion

3.1 Introduction

The first part of the present studies describes the efforts to develop a thermally

stable version of the Burgess reagent that retains the reactivity of the original reagent.

Such a reagent would be useful to synthetic chemists who are employing the Burgess

reagent in reactions at elevated temperatures. At high temperatures, the original Burgess

reagent is unstable and its decomposition leads to reduced yields. A more stable reagent

would also require less care in handling and could be stored for longer periods of time.

The second part of this thesis details the progress toward the total synthesis of

morphine beginning with the enzymatic dihydroxylation of bromobenzene. As pointed

out in the Historical Section, the ultimate goal of our synthetic studies of morphine is to

develop a route efficient enough to compete with isolation of morphine from natural

sources. Progress toward this goal is discussed herein.

In addition, the characterization of several new metabolites of toluene

dioxygenase provides new chiral materials that can be utilized in total synthesis by

academic and industrial chemists. The characterization of new metabolites helps us to

better understand the nature of toluene dioxygenase and its strengths and limitations.

Hopefully, more chemists will realize the environmental benefits of enzymatic reactions

and be encouraged to incorporate enzymatic reactions into their total synthesis efforts.

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3.2 New Burgess reagents

Three new Burgess reagents were synthesized for this study. Also included were

the original Burgess reagent (1) and the menthyl chiral auxiliary Burgess reagent 124

(Figure 77). The goal was to stabilize the negative and positive charges with electron

withdrawing and donating groups respectively as shown in Figure 1 (page I). For the

electron withdrawing group, we chose trifluoroethanol and for the electron donating

group we replaced triethylamine with N-methyl piperidine. Although 1 is commercially

available from Sigma-Aldrich, the commercial reagent is expensive and often contains

impurities.13 The Burgess reagent was prepared as described in Burgess' Organic

Syntheses paper.153 Menthyl Burgess reagent 124 was prepared by the method described

by Hudlicky.22

313

Figure 77-Burgess reagents employed in this study

Reagent 313 was prepared by Burgess' method with the substitution of

triethylamine with N-methylpiperidine. Fluorinated reagents 312 and 314 required more

modification of Burgess' procedure to synthesize. Chlorosulfonyl isocyanate (117) was

treated with 2,2,2-trifluoroethanol in benzene to give carbamate 316. Carbamate 316

proved to have very limited solubility in benzene, therefore, the solvent wa,s switched to

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THF. Treatment of 316 with 2.2 equivalents of triethylamine yielded reagent 312 and

treatment of316 with N-methylpiperidine gave 314 (Figure 78).

0,/9 's'

CI ..... 'N=C=O

117

MeOH PhH, r.t.

PhH,O°C

N-methylpiperidine (2.2 eq)

PhH,O°C 313

N-methylpiperidine 0" /P ~ (2.2 eq) G'S'N/"-....O ............... CF ------l..... E!:l" e 3

THF, 0 °c 314

Figure 78-Preparation of Burgess reagents

The reactivity of the new Burgess reagents was compared to the original Burgess

reagent and the menthyl reagent 124 in a series of reactions. 154 The results are shown in

Table 1. Each reagent was tested in a dehydration reaction, reactions with epoxides, and

with styrene dioL Yields of the dehydration of317 to 318 were about 30 % higher when

the new Burgess reagents were employed. In the reaction with cyclohexene oxide (104)

the N-methylpiperidine reagent gave a 16 % improvement in yield over that observed

with the original reagent 1. The fluorinated reagents however, gave a significant decrease

in yield. We believe that this is because the nitrogen atom bearing the negative charge is

too stable and not nucleophilic enough to open the epoxide. When the more activated

allylic epoxide 152 was treated with our Burgess reagents we did see higher yields of

sulfamidates compared to the opening of 104. The fluorinated reagents 312 and 314 were

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nucleophilic enough to open epoxide 152 and gave sulfamidate 324 in modest yield. In

the reaction of reagents 1 and 313 we obtained yields similar to those reported by

Nicolaou.13-14 Reagents 312 and 314 gave only sulfonation of the alcohol, which is

consistent with the mechanism for the formation of sulfamidates from diols proposed by

Nicolaou. 13-14 The formation of dicarbamate 322 was quite surprising. However this can

also be rationalized by invoking a bis-sulfonated intermediate 325, which, for steric

reasons, may not undergo intramolecular displacement at the benzylic position. A less

sterically demanding intramolecular displacement may take place yielding sulfamidate

326, which then could be substituted at the benzylic position by the carbamate anion 327,

created by the displacement of the second equivalent of 124. Another option is an

intramolecular SN2 type reaction similar to the mechanism· described by Burgess for the

formation of carbamates from primary alcohols (Figure 79).3

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Table I-Reactivity trends of the new Burgess reagents in dehydration, reactions with oxiranes, and with

styrene diol

OH

0) 0 0 0 0 OH

Starting material Ph~OH 317 104 152 74

Reagent Product(s)

CXO\~O CXO\~O o 0 MeO

CO Meo,J(N-S~O )::N 0 ' ~ ~ N' ''0 N 0 o ~

Me~O Me~O Ph~O ~/~ Ph 0 0

57 113

318 (63 %) 109 (40 %) 319 (30 %) 75:107 (77 %) (98:2)

CXO~O CXO~O 0

CO RO)lNH H ' " ~ NU 124 N 0

R~O R~O Ph~NnOR 0

318 (60 %) 320 (35 %) 321 (36 %) 322 (70 %) R=Menthyl R=Menthyl R=Menthyl

CO CXO~O CXO~O , ~

~ N' U 312 N 0 sulfonation only

F3CH2C~0 ~O F3CH2CO

318 (93 %) 323 (12 %) 324 (53 %)

CXO~O CXO~O o 0 MeO

CO MeO,J( S~O )=N 0

313 ' " ~ N' ''0 N- \ 0 ~ N 0 ~O ~/"

Me~O Me~O Ph Ph 0 0 75 113

318 (94 %) 109 (56 %) 319 (57 %) 57:107 (82 %) (95:5)

CO CXO~O CX°'s~O , ~ ~ N'U 314 N 0 sulfonation only

~O F3CH2C~0 F3CH2CO

318 (93 %) 323 (17 %) 324 (45 %)

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O2 (0-S.o2 OH 0~S'N~C02R

~OH 124 00 9 otN-Co,R 1-":::: ~ •

1.0 • .0 C 0'S~~'C02R e

74 325 O2 326 NHC02R

327

R=menthyl or O2 0 Cy~S'N~C02R

RO)lNH H o?O -..:::: .. 1 e Ph~NnOR

.0 CO'S~N,CO R o 2 0

325 2 322

Figure 79-Possible mechanisms for the formation of322

3.3 Stability studies

To determine the thermal stability of the reagents, we chose to follow their

decomposition in THF-ds at 50°C and at reflux by monitoring the content of the sample

by 13e NMR. Originally, we sought to use IH NMR but as the reagent decomposed, there

was quite a bit of signal broadening and the signals arising from the decomposition

products often overlapped the reagent signals. A timed series of 13e NMR spectra were

recorded for each reagent. For each spectrum the peak area of the carbamate 13e signal

(around 157 ppm) was determined by direct integration and calibration against solvent

Be signal corresponding to THF-ds at 64.6 ppm. The magnitude of the carbamate 13e

signal in the fIrst spectrum was set at 100%.154 The results are shown in Figures 80 and

81 and are compared with those obtained for the original Burgess reagent as well as its

menthyl chiral auxiliary version. [The plots shown are the actual decays with percent

content illustrated on the left.]

As seen in Figure 80, all reagents are stable at 50°C for several hours. The

original Burgess reagent (1) and menthyl reagent 124 decompose at the fastest rate and

have half-lives of216 and 198 minutes respectively. The fluorinated reagent 312 shows a

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modest increase in stability. The N-methylpiperidine reagents 313 and 314 are stable at

50°C for over 12 hours. At reflux, the half1ives of 1 and 124 drop dramatically to 19 and

13 minutes respectively and are undetectable after one hour. Again, reagent 312 shows an

increase in stability. The N-methylpiperidine reagents 313 and 314 are the most stable

and decomposition is negligible for over three hours at reflux in THF (Figure 81).

1

0) c ·c ro E Q) .... 4-' C Q) u .... Q)

D....

100

80

60

40

20

O~~--'-~--~-'--~-'--~~--~~--~~r-~~

o 100

124 312

200 300 400

Time (min)

313 .314

500 600 700

Figure 80-Decomposition of Burgess reagents at 50°C in THF-ds as a function oftime

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1

80

0) c c 60 ro E QJ '-...... C QJ 40 u '-QJ

a..

20

o

124

20

312

40 60 80 100 120 140 1 60 180

Time (min)

313 .314

Figure 81-Decomposition of Burgess reagents at reflux in THF -dg as a function of time

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Figures 82-86 show the decomposition of each reagent at both 50°C and at reflux

to illustrate the relative rates of decomposition at reflux than at 50 °Co Reagents 1, 124,

and 312, decompose much more rapidly at reflux than at 50°C. The more stable

N-methyl piperidine reagents 313 and 314, do not show as much of a decrease in stability

at refluxo

0) 80 c

c 70 om E 60 ~ 50 - 40 c Q)

30 (2 Q) 20 a.

10 0

0

100 90

0) 80 c

c 70 om 60 E

~ 50 - 40 c Q)

30 e Q) 20 a.

10 0

0

200 400

Time (min)

.. 600

.. Decomposition at 50°C

l1li Decomposition at reflux

800

Figure 82- Decomposition of 1 at 50°C and at reflux

..

200 400

Time (min)

600 800

.. Decomposition at 50°C

II Decomposition at reflux

Figure 83- Decomposition of 124 at 50 °C and at reflux

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100 90

0') c:: c:: 70 "m E 60 ~ 50 +-'

40 c:: Q)

30 ~ Q) 20 c..

10 0

100

0') 90

c:: 80 c:: 70 m E 60 ~ 50

+-' 40 c::

Q) 30 ~

Q) 20 c.. 10 0

0

0

200 400

Time (min)

600 800

.. Decomposition at 50°C

.. Decomposition at reflux

Figure 84- Decomposition of 312 at 50°C and at reflux

200 400

Time (Min)

600 800

.. Decomposition at 50°C

liD Decomposition at reflux

Figure 85- Decomposition of 313 at 50°C and at reflux

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100 90

Q) 80 c:

c: 70 ·ro E 60 ~ 50 - 40 c: CI)

30 ~ CI) 20 a..

10 0

0 200 400

Time (min)

600

• Decomposition at 50°C

IIiI Decomposition at reflux

800

Figure 86- Decomposition of 314 at 50°C and at reflux

The rapid decomposition of reagents 1 and 124 explain why yields of

sulfamidates from epoxides are often low compared to the yields of sulfamidates from

1,2-diols. The decomposition studies as well as the reactivity profiles show that reagents

312 and 313 are likely the most useful to synthetic chemists. The minor increase in

stability of reagent 314 does not offer any advantages in reactivity at least in the cases

involving oxiranes.

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3.4 Synthesis of morphine C-ring fragment

The synthesis of the C-ring of morphine (3), as outlined in the Introduction on

page 2, began with the microbial oxidation of bromobenzene (13) to diol 12.

Fermentation took place III a 15 L Biostat fermentor (12 L working volume).

Approximately 20 gIL diol was isolated from the fermentation. Diol 12 was then

subjected to diimide reduction of the distal double bond to give diol 328. The distal

hydroxyl group was then protected as a silyl ether 329. The proximal hydroxyl group was

then coupled to Boc-protected glycine. A Kazmaier-Claisen rearrangement was then

performed to give amino acid 330. The crude amino acid was then methylated with

diazomethane to give the C-ring fragment as a mixture of diastereomers 10 (Figure 82).

Br

6 E. coli JM109 (pDlG601) ~OH

13

Br aDH

OTDS 329

68 % over 2 steps

-20 gIL

BocGlyOH, DCC • DMAP, DCM, 70 %

UOH 12

Br C02Me

.»-'NHBOC

lDSO"V 10

Br PAD, AcOH, MeOH .. ~OH lDSCI, imidazole ..

DMF, _8°C, 3 days 90 % o °C, 72 %

UOH 328

LDA (2 eq)

ZnCI2, DCM

Br C02H

.»-'NHBOC

TDSO"V 330

Figure 87-Synthesis of the C-ring fragment of morphine

Diastereomeric mixture 10 was separated by column chromatography to give

C-ring fragment 9 and its diastereomer 331 in a 1:4 ratio. The undesired diastereomer 331

was then recycled by epimerization and separation (Figure 83).

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epimerization conditions

! Br C02Me Br C02Me

.~NHBOC ------o .. ~ .N·"NHBoC

TDSO" U TDSO" U 10 331

Br C02Me

+ .~NHBOC TDSO"U

9

Figure 88-Separation of diastereomers and recycling of 331

The original epimerization conditions took five days to complete and gave a 2:1

ratio of331:9. This became a significant bottleneck in the synthesis of9, so we undertook

an optimization of the epimerization (Table 2). In Table 2, the yield refers to the total

recovery of both diastereomers. Changing the solvent from THF to DME (entries 2-4)

. allowed the time to be decreased from five to three days. Increasing the equivalents of

DBU helped to improve the ratio of331:9 but led to slightly lower recovery (entries 3-4).

A neat reaction in DBU led to major decomposition (entry 5). This data led us to

determine that the optimal conditions, were 0.5 eq DBU in DME for three days (entry 4).

These conditions gave us a good dr, shorter reaction times than the original conditions,

and low decomposition.

Table 2-0ptimization of epimerization conditions of 331

Entry Solvent eq DBU Temperature Time Yield of 10 Ratio

(OC) (d) (%) 331:9 1 THF 0.1 66 5 80 2:1 2 DME 0.1 85 3 85 2:1 3 DME 1 85 3 70 1 :1 4 DME 0.5 85 3 80 1:1 5 neat excess 120 2 20 1 :1

3.5 Coupling of A-ring fragment

With the C-ring fragment 9 in hand, we went on to explore the preparation of the

A-ring fragment 8 and the coupling of 8 and 9. Our original preparation of 8 involved a

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three step sequence starting from guaiacol (332). This sequence however gave 8 in only

30 % yield and unreacted guaiacol was difficult to remove. A search of the literature

yielded a one step preparation of 8 by Snieckus 155. Snieckus' procedure involves a

directed ortho metalation of 1,2-dimethoxybenzene (335) followed by quenching with

trimethylborate (Figure 84). This one-pot procedure gave 8 in 85 % yield and was easily

performed on a multi-gram scale.

/0X) Br2 /OJQ .. HO :::::,...

HO :::::,... Br

332 333

1. nBuLi, TMEDA

2. B(OMeh 3. HCI

335

Mel /OJQ ." '0 :::::,...

/0Y) 'O~

B(OHh 8, (85 %)

Br 334

1. nBuLi, B(OMeh .. 2. HCI

Figure 89-Preparation of A-ring fragment 8

/OJQ '0 :::::,...

B(OHh 8, (30 %

over 3 steps)

The A-ring (8) and C-ring (9) fragments were then joined by a Suzuki coupling

(Figure 85). The initial conditions employed a biphasic reaction in benzene and water.

However, the yields were not always reproducible and we worried about hydrolysis of the

methyl ester. The conditions were optimized as shown in Table 3. The palladium

tetrakis(triphenylphosphine) varied between batches and seemed to have an effect on

yields and was therefore replaced with Pd( dppf)2. The use of Pd( dppf)2Ch and CsOAc in

THF gave reproducible reactions in good yield. Substituting CsOAc for CS2C03

improved the yield by a further 19 %.

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/OY/l 'O~

B(OHh

8

Entry

1

2

3

+

Br C02Me

.~NHBOC TDSO"V

9

Conditions

Figure 90-Suzuki coupling of 8 and 9

Table 3-Optimization of Suzuki coupling

'0

TDSO'"

Solvent Catalyst Base Phase transfer

<ment

benzene Pd(PPh3)4 Na2C03 TBAB (aq)

THF Pd(dppfhCl2 CsOAc none

THF Pd(dppfhCl2 CS2C03 none

3.6 Synthesis of Claisen substrates

NHBoc

7

Yield 1%1 60-75

70

89

Several substrates for the 10hnson-Claisen rearrangement were synthesized from

intermediate 7. The first substrate synthesized was alcohol 338. This was done by

removing the silyl ether of 7 followed by a Mitsunobu reaction to invert the

stereochemistry of the alcohol. Deprotection proceeded smoothly and the product of the

Mitsunobu reaction 337 was obtained in good yield. Hydrolysis of the benzoate ester in

methanol gave 338 in 85 % yield (Figure 86).

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/0

'0

TOSO'"

NHBoc

7

337

TBAF, THF '0 .. 95%

85%

326

PBU3, DEAD '0 .. PhC02H, THF,

NHBoc 82 %

BzO

338

Figure 91-Synthesis of alcohol 338

NHBoc

337

The next substrate synthesized for the Claisen rearrangement was acetate 340.

This was prepared by simultaneously removing the benzyl ester and Boc protecting

groups of 337 to give free amine 339 and then re-protecting the amine as its acetate

(Figure 87).

337

, TFA/MeOH (4:1) 0 ..

36%

339

/0

pN02PhOAc '0 .. Et3N, MeOH,

60% HO

Figure 92-Preparation of CIa is en substrate 340

NHAc

340

The final Claisen substrate prepared was cyclic carbamate 6. Diester 337 was

reduced with lithium aluminum hydride to give alcohol 341. Treatment of 341 with two

equivalents of sodium hydride gave carbamate 6 in 80 % yield (Figure 88).

/0» /O~ /O~ '0 I .0 C02Me LiAIH4, THF '0 1.0 OH NaH, DMF '0 1.0 0 .. .. )=0

~ NHBoc 91 % ~ NHBoc 80 % ~ N

H

BzO HO HO 337 341 6

Figure 93-Preparation of cyclic carbamate 6

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3.7 Claisen rearrangement

All attempts at performing the planned Johnston-Claisen rearrangement failed to

yield the desired rearranged product of type 342 (Figure 89). The results· of several

attempts are shown in Table 4.

conditions Substrate )( .

R

342

Figure 94-Attempted Iohnson-Claisen rearrangement

The first substrate tested in the Claisen rearrangement was 338. The substrate was

subjected to the conditions employed in Chida's synthesis of morphine.74 Unfortunately

the high temperature and acidic conditions led to the loss of the Boc protecting group.

The only product isolated was acetamide 340 in a very low yield. We then attempted the

rearrangement on 340 but after three days only starting material was isolated. We then

turned our attention to cyclic carbamate 6. Our rationale was that the C-13 (morphine

numbering) position would be more accessible without the steric bulk of the methyl ester

and amine. Unfortunately, repeating Chida's conditions on 6 led only to decomposition.

We then subjected 6 to more traditional Johnson-Claisen conditions, using propionic acid

and triethyl orthoacetate. These conditions also lead to decomposition. In the final

attempt at the rearrangement, we used McGreary and Cosgrove's TIBAL catalyzed

Johnson-Claisen rearrangement. 145 This reaction led only to the elimination of the

hydroxyl group to a diene (Table 4). At this point, it is believed that the nitrogen atom

must have some effect that prevents the rearrangement as the presence of nitrogen is the

only major difference between our Claisen substrates and Chida's.

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Table 4-Substrates and conditions attempted in Iohnson-Claisen rearrangement

Substrate Conditions Product

......... 0

........ 0 trimethyl orthoacetate, o-Nitrophenol (10 mol %),

NHAc NHBoc 140 ac, 3 days

HO 338 340, -5 %

......... 0

trimethylorthoacetate, o-Nitrophenol (10 mol %),

NHAc 140 ac, 3 days NHAc

HO 340

HO 340,60 %

......... 0

........ 0 0 triethyl orthoacetate, )=0 o-Nitrophenol (10 mol %), decomposition

N 140 ac, 3 days H

HO 6

........ 0 0 triethyl orthoacetate, )=0 propionic acid (10 mol %), decomposition

N 160 ac, 3 days H

HO 6

......... 0 ......... 0

........ 0 0 1. Diethyl ketene acetal, ........ 0 0 )=0 neat, rt, 2 hours )=0

N 2. TIBAL (1 eq), rt, 14 N H hours H

HO 6 40%

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3.8 Biotransformations

A series of halogen substituted benzoate esters were tested as substrates of TDO.

The substrates were first tested in Fernbach shake flasks. Approximately 100 mg was

incubated with E. coli JMI09(pDTG601) at 35 DC for 6 hours. The appearance of

metabolites was followed by TLC. In the event that the ester was metabolized, cells were

separated from the broth by centrifugation and the supernatant was extracted with EtOAc

and a preliminary NMR spectrum was acquired. A large scale fermentation was then

performed with the particular substrate and the metabolites were characterized. As shown

in Table 5, all meta- and para-substituted benzoates were not metabolized. Ortho­

substituted benzoates were found to be substrates although the metabolites were produced

in relative low yields compared to the 1.3 giL yield of unsubstituted methyl benzoate. 94

Fluoro-substituted benzoate 343 yielded only one metabolite while chI oro- and bromo­

substituted benzoates 347 and 351 gave a mixture of diols. Iodo- substituted methyl

benzoate 355 gave only a single metabolite. This trend is in accordance with Boyd's

model for predicting the regio-chemistry of dihydroxylation by TDO.89 In the case of

343, the ester directs the regiochemistry of dihydroxylation. The increasing steric bulk of

chlorine and bromine lead to a mixture of metabolites and in the case of iodine

substituted benzoate 355 the iodine atom directs dihydroxylation. At the time of this

writing, the absolute stereochemistry of the isolated metabolites has not yet been

determined. The relative stereochemistry of all metabolites was determined by 2D NMR

(H,H COSY, HSQC, and HMBC). The physical and spectral properties of344 have been

fully characterized and preliminary characterization has been achieved for metabolites

348, 349, 352, 353, and 356. It was found that like the diols isolated from the

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fermentation of unsubstituted benzoate esters (249), metabolites where dihydroxylation

occurred adjacent to the ester (344, 348, and 352) were stable at room temperature and

amenable to purification by column chromatography. Metabolites that possessed

dihydroxylation adjacent to the halogen atom (349, 353, and 355) were much less stable

and upon chromatography, would re-aromatize to give phenols.

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Table 5-Metabolism of halogen substituted benzoate esters by TDO

Starting material Products (Yield)

15M. ~ct F -..::::: F ~ OH

1.0 ~ OH

343 344 (0.05 gIL)

15M

• 1-"::::: No conversion

F .0 345

QM. 1-":::::

.0 No conversion

F 346

'8M. u· M.~~H CI -..::::: CI ~ OH

1.0 ~ OH ~ OH

347 348 (0.47 gIL) 349 (.035 gIL)

15M

• No conversion

CI .0 350

15M

• '5. M.O'C~H Br -..::::: Br ~ OH

1.0 ~ OH ~ OH

351 352 353

QM. No conversion

Br 354

15M. I -..::::: M.~C~H 1.0

~ OH 355 356

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4. Conclusions and future work

We have developed the synthesis for and measured the stability of several

Burgess reagents and tested their reactivity towards epoxides, diols and in dehydration

reactions. We found that reagents 312 and 313 are likely to be the most useful to

synthetic chemists in terms of stability and reactivity towards alcohols, epoxides, and

diols. Other variants of the Burgess reagents such as Nicolaou's reagents 98a-e and

Wipfs PEG supported reagent 118 may benefit from increase in stability by replacing the

triethylamine portion of the reagent with N-methylpiperidine.

Our proposed synthesis of morphine (3) proceeded to the Johnson-Claisen

rearrangement step which was ultimately unsuccessful. As shown in Figure 90, the

Johnson-Claisen substrates described in this thesis differ only slightly from Chida's

intermediate 219. The presence of a carbamate may prevent the reaction from proceeding

as envisioned. The carbamate may also impart lower stability on our substrates thus

leading to the decomposition observed in several of our reactions.

....... 0 .......0

'0 0 FO '0

C02Et N NHBoc NHAc H

HO HO 219 6 338 340

Figure 95-Cbida's intennediate compared to Claisen substrates prepared in this thesis

Another strategy would be the preparation of a diene of type 357 followed by a

cycloadditions of a ketene acetal. Methylation of the nitrogen atom to produce 360 may

prevent the problems encountered in performing the Johnson-Claisen rearrangement

(Figure 91). Work on the completion of the synthesis is currently being undertaken by

Mr. Vimal Varghese.

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....... 0 ....... 0 R°Ir°R

....... 0

'0 ----.- '0 '0 ------.- ------------.- or

R R R NHBoc

RO HO

RO 359 338 357 358

....... 0 ....... 0

'0 0 '0 o '0 0 )=0 -------.- )=0 ---------.- )=0

N N Et02C N H \ \

Me Me HO HO

6 360 361 Figure 96-Proposed cyc1oaddition strategy and methylated Claisen substrate for the completion of the

synthesis of morphine

Several new metabolites of toluene dioxygenase have been discovered. More

complete characterization, proof of absolute stereochemistry and optimization of the

fermentation procedure need to be undertaken by future workers in this area.

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5 Experimental section

5.1 General

All non-hydrolytic reactions were carried out under an inert atmosphere. Glassware used

for moisture-sensitive reactions was flame-dried under vacuum and subsequently purged

with inert gas. THF, toluene and benzene were distilled from sodiumlbenzophenone.

DCM, triethylamine, and N-methylpiperidine were distilled over calcium hydride. Flash

column chromatography was performed using Silicyde Siliaflash P60 230-400 mesh

silica gel. Analytical thin-layer chromatography was performed using EMD Chemicals

TLC Silica Gel 60 F254 plates. Melting points were measured on a Thomas-Hoover

melting point apparatus and are reported uncorrected. IR spectra were obtained on a

Perkin-Elmer FT-IR 1600 Series Spectrum One instrument. IH and l3C NMR spectra

were obtained on either a 300 MHz Broker or a 600 MHz Bruker instrument. Mass

spectra were acquired on a Kratos Concept 1 S High Resolution EIB mass spectrometer.

Ionization methods were either electron impact (EI) or fast atom bombardment (FAB) on

a N-bromo-acetamide (NBA) matrix. Specific rotation measurements are given in deg.

cm3 g-l dm-l and were recorded on a Perkin-Elmer 341 Polarimeter. Large scale

fermentation was performed in a 15 L Sartorius (formerly B. Braun) Biostat C fermentor.

Combustion analyses were performed by Atlantic Microlabs, Norcross, GA, U.S.A.

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5.2 Preparation of new Burgess reagents

2,2,2-Trifluoroethyl chlorosulfonylcarbamate (316)

2,2,2-Trifluoroethanol (3.36 mL, 46 mmol) in dry benzene (10 mL) was added dropwise

to chlorosulfonyl isocyanate (4.0 mL, 46 mmol) in 15 mL of dry benzene at room

temperature. When the addition was complete, the reaction mixture was stirred for 30

min. The product, 2,2,2-trifluoroethyl chlorosulfonylcarbamate (316), was precipitated

with cold hexanes as white crystals (10.25 g, 42 mmol, 92%); mp 80-82 °c (C6H6); IH

NMR(CDCh, 300 MHz) (5 8.44 (m, IH), 4.66 (q, J= 7.9 Hz, 2H) ppm; BC NMR (CDCh,

75 MHz) (5 147.7, 122.0 (q, J= 278.8 Hz), 62.9 (q, J= 38.6 Hz) ppm; IR (KBr) v 3167.6,

2931.6, 2637.9, 1750.3, 1483.9, 1396.8, 1166.0 em-I; LRMS (FAB+NBA matrix) mJz

242, 149 (18.9), 99 (41.3), 73 (25.9), 59 (80.8), 49 (100.0); HRMS calcd. for

N ,N-Diethyl-N-[(2,2,2-trifluoroethyloxycarbonyl)amino] sulfonyl-ethanaminium,

inner salt (312)

2,2,2-Trifluoroethyl chlorosulfonylcarbamate (316) (2.0 g, 8.3 mmol) in 50 mL dry THF

was added dropwise to triethylamine (2.90 mL, 20.8 mmol) in 20 mL dry THF in an ice

bath. Once the addition was complete, the reaction was stirred for additional two hours.

Triethylammonium chloride salt was filtered and the solvent removed i1} vacuo. The

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product (312) was recrystallized twice from dry THF (1.91 g, 6.2 mmol, 75 %); mp 77-79

°C (THF); IH NMR (CDCh, 300 MHz) 84.48 (d, J= 8.6 Hz, 2H) 3.84 (q, J= 7.8 Hz, 6H)

1.44 (t, J= 9.5 Hz, 9H) ppm; 13C NMR (THF(ds) , 150 MHz) 8 155.4, 123.8 (q, J= 277.4

Hz), 60.1 (q, J= 35.8 Hz), 50.6, 8.5 ppm; IR (KBr) v 3167.6, 2986.1, 2931.6, 2676.8,

2637.9, 2107.9, 1750.3, 1691.2 cm-I; LRMS (FAB+NBA matrix) mlz 307, 239 (30.8),

102 (100.0),86 (20.0); HRMS calcd. for C9HISF3N204S: 307.0934, found: 307.0930.

N-Methyl-N-[(methyloxycarbonyl)amino] sulfonyl piperidinamininm, inner salt

(313)

Methyl chlorosulfonylcarbamate (315) (6.83 g, 39 mmol) in benzene (30 mL) was added

dropwise to N-methylpiperidine in benzene (20 mL) cooled in an ice bath. Once the

addition was complete, the reaction was stirred for additional two hours. N-Methyl

piperidinium chloride salt was filtered off and the solvent was removed in vacuo. The

product was recrystallized two times from dry THF to yield 313 (6.6 g, 28 mmol, 71 %);

mp 87-90 °C (THF); IH NMR (CDCh, 300 MHz) 8 3.72 (s, 3H), 3.60 (m, 2H), 3.45 (m,

2H) 3.14 (s, 3H) 1.81-2.00 (m, 6H) ppm; 13C NMR (CDCh, 75 MHz) 8 158.2,54.7,53.3,

40.1,21.6,20.6 ppm; IR (KBr) v 3206.4,2951.4,2869.3,2686.4,2110.2,1704.5,1470.7

cm-\ LRMS (FAB+NBA matrix) mlz 237,205 (34.3), 100 (100.0), 70 (11.2).

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N-Methyl-N-[(2,2,2-trifluoroethyloxycarhonyl)amino]sulfonyl-piperidinaminium,

inner salt (314)

2,2,2-Trifluoroethyl chlorosulfonylcarbamate (316) (4.0 g, 17 mmol) in 30 mL dry THF

was added dropwise to N-methylpiperidine (3.80 g, 38 mmol) in 20 mL dry THF at 0 CC.

Once the addition was complete, the reaction was stirred for an additional two hours.

N-Methylpiperidinium chloride salt was filtered off and the solvent removed in vacuo.

The product was recrystallized two times from dry THF to yield 314 (2.4 g, 7.9 mmol, 48

%); mp 79-81 cc (THF); IH NMR (CDCh, 300 MHz) D 4.48 (q, J= 8.5 Hz, 2H), 3.63 (m,

2H), 3.45 (m, 2H), 3.15 (s, 3H), 1.82-1.99 (m, 6H) ppm; 13C NMR (CDCh , 150 MHz) D

156.1, 123.2 (q, J= 277.8 Hz), 61.7 (q, J= 36.0 Hz), 54.8, 40.2, 21.4, 20.6 ppm; IR (KBr)

v 3425.3, 2964.1, 2872.7, 2716.4, 2127.0, 1712.9, 1470.3 em-I; LRMS (FAB+ NBA

matrix) mlz 305, 205 (26.7), 137 (3.9), 100 (100.00); HRMS calcd. for C9HI5F3N204S:

305.0783, found: 305.0764.

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General procedure for dehydration of 1,2,3,4 tetrahydro-l-naphthol with Burgess

reagents

1,2,3,4-Tetrahydro-l-naphthol (1.83 mmol) and Burgess reagent (2.10 mmol) were

dissolved in dry benzene (5 mL) at room temperature, the reaction mixture was brought

to reflux temperature and monitored by TLC. Reactions were stopped after 2 hours.

General procedure for reactions of Burgess reagents with oxiranes

The appropriate Burgess reagent inner salt (9.2 mmol) was added to a stirred solution of

the oxirane (4.0 mmol) in THF (20 mL) at room temperature in a single portion. The

resulting reaction mixture was brought to reflux immediately by submerging it into a

preheated oil bath (80°C). The reaction mixture was stirred until complete consumption

of the oxirane (TLC), then cooled to room temperature and filtered through a plug of

silica. The reaction mixture was concentrated, and the resulting residue was purified by

flash column chromatography using an appropriate solvent gradient to yield the

sulfamidate product(s).

General procedure for reactions of Burgess reagents with diols

l-Phenyl-l,2-ethanediol (3.7 mmol, 1.0 equiv) was dissolved in anhydrous THF (10 mL)

and Burgess reagent (9.3 mmol, 2.5 equiv) was added. The resulting solution was

warmed to reflux (using an oil bath preheated to 80°C) and stirred for 2 to 8 hours until

the diol was completely consumed (TLC). The reaction was quenched with a saturated

solution ofNH4CI (5 mL) and the mixture was extracted with CH2Cb (3 x 50 mL). The

combined organic layers were then washed with water (50 mL), dried over Na2S04 and

concentrated. The resultant yellow oil was purified by flash column chromatography

(silica gel) using an appropriate solvent system.

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319

Methyl cis-tetrahydro-3H-1,2,3-benzoxathiazole-3-carboxylate 2,2-dioxide (319)

Eluent: hexanes-ethyl acetate, 4:1; Rj 0.42 (2:1 Hex:EtOAc); mp 145-147 °C (EtOAc);

IH NMR (CDCh, 600 MHz) 8 6.12 (m, IH), 5.81 (d, J= 10.32 Hz, IH), 5.21 (s, IH), 4.80

(s, IH), 3.93 (s, 3H), 2.35 (m, IH), 2.30 (m, IH), 2.15 (m, IH), 1.92 (m, IH) ppm; l3C

NMR (CDCh, 150 MHz) 8 150.5, 131.6, 120.7, 77.8, 55.5, 54.6, 24.0, 18.5 ppm; IR

(KBr) v 3438.9, 3010.2, 2963.5, 2853.3, 2544.9, 1725.9 em-I; LRMS (FAB+NBA

matrix) mlz 234, 214 (13.5), 156 (27.4), 79 (40.3); HRMS calcd. for CsH12N04S

234.0436, found: 234.0394. Anal. calcd for CsHuN05S: C 41.20, H 4.75. Found: C

41.32, H 4.75.

322

Bis-«lR,2S,SR)-2-isopropyl-S-methylcyclohexyl) 1-phenylethane-1,2-diyldicarba-

mate (322)

RjO.75 (1:1 Hex:EtOAc); mp 173-175 °C (EtOAc); IH NMR (CDCh, 300 MHz) 8 7.36

(m, 2H), 7.29 (m, 3H), 5.72 (m, IH), 4.82 (m, 2H), 4.56 (m, 2H), 3.52 (s, 2H), 2.01 (m,

4H), 1.69 (m, 5H), 1.51 (s, 3H), 1.32 (m, 2H) 0.95 (m, 24H); l3C NMR (CDCh, 150

MHz) 8 128.7, 127.7, 126.3,.75.0, 74.8, 56.4, 47.3, 41.4, 34.3, 31.4, 26.3, 23.5, 22.0,

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20.9, 16.4; IR (KBr) v 1015.2, 1148.8, 1291.1, 1455.0, 1533.1, 1685.8, 2956.1, 3364.2

em-I; LRMS (FAB+NBA matrix) mlz, 501(11.3), 319 (22.1), 225 (24.3), 181 (69.9), 120

(38.0),83 (100.0); Anal. ealed for C30H48N204: C 71.96, H 9.66, N 5.59, found: C 71.70,

H 9.78, N 5.60.

2,2,2, Triflooroethyl cis-hexahydro-3H-l,2,3-benzoxathiazole-3-carboxylate 2,2-

dioxide (323)

Eluent: hexanes-ethyl acetate, 2:1; Rf 0.45 (2:1 Hex:EtOAe); mp 83-85 DC (EtOAe); IH

NMR (CDCh, 600 MHz) 5 5.07 (d, J= 3.1 Hz, IH), 4.69 (m, IH), 4.61 (m, IH), 4.27 (m,

IH), 2.38 (m, IH), 2.33 (m, IH), 1.90 (m, IH), 1.81 (m,2H), 1.69 (m, IH), 1.55 (m, IH),

1.27 (m, IH); BC NMR (CDCh, 150 MHz) 5 148.3, 122.3 (q, J= 278.8 Hz), 80.0, 62.5

(q, J = 37.6 Hz), 58.4, 26.9, 21.8, 18.8; IR (KBr) v 3031.7, 2947.2, 2871.5, 1755.5,

1623.1 em-I; LRMS (FAB+NBA matrix) mlz 304,258 (5.5),224 (43.3), 136 (30.7), 81

(100.0); HRMS ealed. for C9HI3F3N05S: 304.0512, found: 304.0467; Anal. ealed for

C9H I2F3N05'S: C 35.65, H 3.99, found: C 35.74, H 3.98.

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2,2,2-Trlfluoroethyl cis-tetrahydro-3H-l,2,3-benzoxathiazole-3-carboxylate 2,2-

dioxide (324)

Eluent: hexane8-ethyl acetate, 2: 1; Rj 0.46 (2: 1 Hex: EtOAc ); mp 70-72 DC (EtOAc); IH

NMR (CDCh, 300 MHz) 8 6.15 (m, IH), 5.79 (d, J= 10.2 Hz, IH), 5.24 (8, IH), 4.85 (8,

IH), 4.65 (m, 2H), 2.29 (m, 2H), 2.09 (m, IH), 1.85 (m, IH); 13C NMR (CDCh, 75 MHz)

8 148.6, 132.3, 122.3 (q, J= 277.7 Hz), 120.1, 78.1, 62.5 (q, J= 37.6 Hz), 55.7, 27.1, 23.9,

18.5; IR (KBr) v 3492.1, 3044.8,2982.3, 2933.8,2853.8, 1766.9 cm-I; LRMS (EI) mlz

301, 221 (33.5),220 (18.4), 216 (14.2), 120 (21.5), 94 (30.0), 78 (100.0); HRMS calcd.

for C9HlOF3NOsS: 301.0232, found: 301.0229; Anal. calcd for C9HlOF3NOsS: C 35.88, H

3.35, found: C 35.98, H 3.24.

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5.3 Stability studies

NMR data collection protocol

The Be NMR spectra were acquired on a Broker Avance AV600 spectrometer equipped

with a BBO-Z grad probe and VT accessory. A series of Be NMR spectra were recorded

for each reagent using a power gated proton decoupling pulse sequence from the Bruker

library with a 30 degree flip angle and a 2 s relaxation delay. Each spectrum was acquired

using 256 transients, 16K data points with a spectral width of238 ppm, a line broadening

of 1Hz and zero filled to 32K points. The acquisition time for each spectrum was 11

minutes. All spectra were processed and analyzed using Broker Topspin2.1 PL4 software

running on a Windows XP workstation.

Decomposition study of Burgess reagents at 50°C

100 mg of Burgess reagent was dissolved in 0.75 mL d8_ THF in an NMR tube. Be

proton decoupled spectra were acquired at 12 minute intervals on the 600 MHz

spectrometer. The integral of the carbonyl peak was compared to that of the solvent peak

at 64.6 ppm to determine the percentage of reagent remaining in each spectrum.

Decomposition study of Burgess reagents at 78°C

Six identical reactions were set up in microreactor vials. 100 mg of Burgess reagent was

dissolved in 0.75 mL d8_ THF. The reaction vials were placed in a pre-heated

microreactor block. At 12 minute intervals, one vial was removed, cooled in liquid

nitrogen and transferred to a dried NMR tube and a Be proton decoupled NMR spectrum

was acquired. The percentage of intact Burgess reagent remaining was determined by

comparing the integral of the carbonyl peak to that of the solvent peak at 64.6 ppm.

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5.4 Intermediates in morphine synthesis

B 0

c:(~NHBOC OTDS

11

A solution of Boc-glycine (12.0 g, 70 mmol), DCC (18.5 g, 90 mmol) and DMAP (85

mg, 7 mmol) in DCM (200 mL) was cooled to 0 °C and a solution of TDS protected diol

329 (15.0 g, 45 mmol) in DCM (200 mL) was added slowly over a period of 10 min. The

reaction mixture was stirred for 14 hours warming to rt. The solution was diluted with

Et20 (200 mL) and filtered through a plug of silica to remove dicyclohexyl urea. The

solvent was removed under reduced pressure and chromatographed on silica gel with

hexanes:ethyl acetate 9: 1 as the eluent. The product 11 was isolated as a colorless oil

(15.4 g, 31.5 mmol, 70 %). Rf 0.7 (4:1 Hex:EtOAc); [a]D20 -64.0 (c = 1.0, MeOH); IH

NMR CDCh, 300 MHz) 8 6.27 (dd, J= 5.2, 3.1 Hz, IH), 5.59 (d, J= 3.9 Hz, 1H), 5.00

(bs, 1H), 3.97 (m, 3H), 2.39-2.19 (m, IH), 2.15-2.09 (m, IH), 1.85-1.62 (m, 2H), 1.43 (s,

9H), 0.84 (s, 3H), 0.82 (s, 3H), 0.77 (d, J = 1.9 Hz, 6H), 0.07 (d, J = 4.6 Hz, 6H) ppm;

13C NMR (CDCh, 75 MHz) 8 169.6, 155.3, 134.8, 117.0, 79.6, 73.9, 69.2, 42.3, 34.0,

28.2, 25.5, 24.7, 22.6, 20.0, 18.5, -3.1, -3.15 ppm; IR (film) v 3445, 2958, 1755, 1715,

1511 cm-I; LRMS (EI) mlz 171 (7), 157 (9), 136 (34), 121 (9), 79 (10), 28 (100); HRMS

calcd. for C2IH39NSiBrOs(M+H): 492.1781, found: 492.1806; Anal. calcd. for

C2IH3SNSiBrOs: C 51.21, H 7.78, found: C 51.41, H 7.75.

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Br C02Me

,~NHBOC TDSO"V

10

Glycine ester 11 (6g, 11.8 mmol) was dissolved in THF (100 mL). A solution ofZnCh in

THF (1.0 M, 19 mL, 19.0 mmol) was added and the mixture was cooled to -78°C. A

solution ofLDA (2.2 M, 8.6 mL, 19.0 mmol) in THF was added dropwise. The reaction

was stirred for 16 hours warming to room temperature. The reaction mixture was then

acidified to a pH of approximately 2.5 with 1M HCI. The resulting solution was then

extracted with Et20 (3 x 100 mL), washed with brine (20 mL), and dried over Na2S04.

The solvent was removed under reduced pressure to give amino acid 330 as a mixture of

diastereomers. The unpurified acid was then treated with excess diazomethane. The

resulting diastereomeric mixture of esters 10 was then chromatographed on silica gel with

hexanes:ethyl acetate 20: 1 to give enantiopure esters 9 and 321 in a ratio of 1:4 with a

combined yield of 68 % over 2 steps.

Br C02Me

~NHBOC TDSoN

9

Yield 3.25 g (1.6 mmol); Rf 0.65 (4:1 Hex:EtOAc); [a]n20 -27.7 (c = 1.0, CHCL3); IH

NMR (CDCh, 300 MHz) 8 6.27 (dd, J= 5.6, 1.3 Hz, IH), 4.81 (m, 2H), 4.12 (m, IH),

4.11 (m, IH), 3.71 (s, 3H), 2.96 (bs, IH), 1.86-1.76 (m, IH), 1.63-1.50 (m, 3H), 1.40 (s,

9H), 0.86 (d, J = 6.9 Hz, 6H), 0.80 (s, 6H), 0.06 (d, J = 5.3 Hz, 6H) ppm; BC NMR

(CDCb, 75 MHz) 8 171.7, 155.4, 135.5, 127.9, 79.7, 65.4, 55.2, 52.2, 43.7, 34.1, 29.5,

28.2,24.8,20.2, 19.9, 18.5, -2.6, -3.0 ppm; lR (KEr) v 3443,2956,2868, 1749, 1715 cm­

I; LRMS (El) mlz 370 (13), 366 (38), 364 (37), 348 (16), 346 (15),231 (24),229 (24),

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162 (95), 75 (100); HRMS calcd. for C22H4INSiBr05(M+H): 506.1920, found:

506.1937; Anal. calcd. for C22H4oNSiBr05: C 52.16, 7.96, found: C 52.34, 8.0l.

Br C02Me

N"'NHBOC

TDsoN 331

Yield 13.0 g (6.4 mmol); Rf 0.7 (4:1 Hex:EtOAc); [a]D20 -55.7 (c = 1.0, CHCL3); IH

NMR (CDCh, 300 MHz) 0 6.30 (dd, J = 5.6, l.3 Hz, 1H), 5.21 (d, J = 8.6 Hz, 1H), 4.68

(dd, J = 8.7, 2.3 Hz, 1H), 4.11 (m, 1H), 3.71 (s, 3H), 3.05 (bs, 1H), 1.86-1.78 (m,2H),

1.63-1.50 (m, 2H), 1.43 (s, 9H), 0.84 (d, J= 6.9 Hz, 6H), 0.80 (s, 6H), 0.05 (d, J= 5.3

Hz, 6H) ppm; l3C NMR (CDCh, 75 MHz) 0 171.9, 155.4, 136.3, 125.5, 80.0, 66.7, 55.9,

52.3,45.1,34.2,29.2,28.3,25.8,24.7,23.4,20.2, 18.6, -2.7, -2.9 ppm; IR (KBr) v 3439,

2955,2867, 1753, 1720 cm-I; HRMS calcd. for C22~INSiBr05(M+H): 506.1920, found:

506.1937; Anal. calcd. for C22~oNSiBr05: C 52.16, 7.96, found: C 52.28, 8.06.

Procedure for recycling 331 to diastereomeric mixture 10.

The undesired diastereomer of the C-ring fragment 331 (13.0 g, 6.4 mmol) was dissolved

in DME (50 mL). DBU (0.49 g, 3.2 mmol) was added and the solution was brought to

reflux and was stirred at reflux for 3 days. The mixture was then diluted with Et20 (100

mL) and washed with a 10 % citric acid solution to remove DBU, washed with brine (2 x

20 mL) and dried over Na2S04. The solvent was removed under reduced pressure to give

diastereomeric mixture 10. The mixture was then chromatographed as described above to

give 9 and 331 (1: 1 ratio) in 80 % combined yield.

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/0

'0

TDSO'\'

NHBoc

7

To a flame-dried flask containing Pd(dppf)2Clz (104 mg, 0.090 mmol) was added methyl

ester 9 (456.4 mg, 0.901 mmol) in degassed THF (7 mL). Boronic acid 8 (328 mg, l.802

mmol) was then added, along with CS2C03 (89 mg, 0.270 mmol). The resulting mixture

was then stirred at reflux overnight. The reaction mixture was then filtered through a plug

of silica with EtOAc, and concentrated to give 569 mg of brown oil. The oil was then

chromatographed on Si02 using 4:1 hexanes : ethyl acetate as the eluent. The coupled

product 7 (448 mg, 0.794 mmol, 88%) was obtained as a clear and colorless oil. Rf 0.8

(1:1 Hex:EtOAc); IH NMR (300 MHz, CDCh) 8 6.97 (t, J= 7.91 Hz, IH), 6.82 (dd, J=

8.29, l.1 Hz, IH), 6.66 (d, J = 7.65 Hz, IH), 5.77 (dd, J = 3.93, l.54 Hz, IH), 5.71 (d, J

= 9.72 Hz, IH), 4.33 (dd, J = 9.72, 2.28 Hz, IH), 4.24 (m, IH), 3.85 (s, 6H), 3.23 (s,

IH), 1.74 (m, 2H), 1.74 (q, J = 6.86 Hz, IH), 1.55 (bs, 4H), 1.42 (s, 9H), 0.91 (dd, J =

6.84,0.93 Hz, 6H), 0.85 (s, 7H), 0.10 (s, 6H) ppm; BC NMR (CDCh, 75 MHz) 8 172.6,

155.2,152.3, 146.2, 139.5, 134.6, 132.5, 124.1, 122.0, 11l.8, 79.3, 63.4, 60.6, 55.7, 54.7,

52.1,38.4,34.4,30.1,28.4,24.9,20.5, 18.7, 17.9, -2.3, -2.8 ppm; IR (neat) v 3449,3019,

2956,2401, 1748, 1716 cm-I; LRMS (FAB + NBA matrix) mlz 404 (10.0), 375 (17.1),

287 (68.2), 227 (54.9); HRMS calcd. for C30H49N07Si: 506.2574, found: 506.2538.

/0

'0

336

NHBoc

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To a stirred solution ofsilyl ether 7 (448 mg, 0.794 mmol) in distilled THF (10mL) was

added tetra-n-butylammonium fluoride (0.87 mL, 0.873 mmol, 1M solution in THF)

dropwise at 0 °C. The resulting solution was allowed to warm to r.t. and stir for 20 hrs.

The reaction was diluted with distilled water (20 mL) and THF was removed under

reduced pressure. The aqueous residue was then extracted with ethyl acetate (3x 10 mL).

The combined organic layers were rinsed with distilled water (10 mL), brine (10 mL) and

dried over sodium sulfate. The resulting mixture was filtered and concentrated to give

free alcohol 336 (271 mg, 0.644 mmol, 81%) as a colorless oil. RI 0.3 (1:1 Hex:EtOAc);

[a]n20 34.65 (c = 0.2, CHCh); IH NMR (CDCh, 300 MHz) 0 6.98 (t, J = 7.9 Hz, 1H),

6.83 (dd, J = 8.2, 1.4 Hz, 1H), 6.68 (d, J = 7.5 Hz, 1H), 5.89 (dd, J = 3.9, 1.40 Hz, 1H),

5.56 (d, J = 9.7 Hz, IH), 4.3 (dd, J = 9.7, 2.5 Hz, IH), 4.28 (m, IH), 3.86 (s, 3H), 3.84

(s, 3H), 3.47 (q, J = 7.03, IH), 3.37 (bs, IH), 3.30 (s, 3H), 1.92 (m, 4H), 1.42 (s, 9H)

ppm; 13C NMR (CDCh, 75 MHz) 0 172.7, 155.2, 152.2, 146.1, 141.7, 134.4, 131.0,

124.0, 122.1, 112.0, 76.6, 63.5, 60.6, 55.8, 54.9, 52.1, 39.1, 30.0, 28.3, 18.8 ppm; IR

(neat) v 3354,3015,2938, 1709, 1523 em-I; LRMS (EI) mlz 303 (13.4),216 (100.0), 200

(24.3), 185 (8.7); HRMS calcd.for C22H31N07: 421.2101, found: 421.2077. Anal. calcd

for C22H31N07: C 62.69, H 7.41, found: C 62.65, H 7.46.

NHBoc

BzO 337

To a stirred solution of alcohol 336 and benzoic acid in dry THF was added a solution of

the Mitsunobu reagent, prepared by the addition of diethyl azodicarboxylate (DEAD) to

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PBU3 in THF at 0 °c. The reaction mixture was allowed to warm to room temperature

over three hours and stirred for another three hours. The solvent was removed under

reduced pressure and the resulting oil was chromatographed on silica gel (Hex: EtOAc

4: 1). The pure product slowly solidified overnight in the freezer and was recrystallized

from EtOAc. Rj 0.27 (2:1 Hex:EtOAc); mp 102-105 °c (EtOAc); IH NMR (CDCb, 300

MHz) 8 8.02 (d, J=7.2 Hz, 2H), 7.54 (t, J=7.4 Hz, IH), 7.42 (t, J= 5.6 Hz, 2H), 6.98 (t,

J= 7.9 Hz, 1H), 6.83 (dd, J= 1.5, 8.01 Hz, IH) 6.70 (dd, J= 1.1, 7.2 Hz, 1H) 5.9 (s, 1H)

3.87 (s, 3H), 3.86 (s, 3H), 3.53 (s, IH), 3.26 (s, 3H), 2.22 (m, 2H), 1.86 (m, 2H), 1.55 (s,

2H), 1.45 (s, 9H) ppm; BC NMR (CDCh, 150 MHz) 8: 171.8, 166.3, 156.2, 152.8, 146.2,

139.2, 135.1, 133.0, 129.7, 128.4, 123.8, 122.2, 112.1,61.4, 56.0, 51.8,40.9,28.5,26.9,

24.8 ppm; LRMS (EI) mlz 525, 403 (8.4), 303 (20.8), 260 (50.4), 216 (100); HRMS

calcd. for C29H3SNOs: 525.2363, found: 525.2369 .

......... 0

'0

HO 339

To a stirred solution of benzoyl ester 337 (148 mg, 0.282 mmol) in distilled DCM (1 mL)

was added distilled TFA (0.25 mL) at r.t. The reaction was allowed to stir for 24 hr. and

was then diluted with DCM (10 mL) and washed with NaHC03 (2 x 3 mL). The aqueous

layer was extracted with DCM (1 x 5 mL). Combined organic layers were rinsed with

distilled water (5 mL) and brine (5 mL) and dried over Na2S04. The organic layer was

then filtered and concentrated to give a yellow oil. The crude mixture was purified by

FCC (98:2 DCM:MeOH) to give 339 as a clear oil (33 mg, 0.103 mmol, 36%).

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RfO.3 (95:5 DCM:MeOH), [a]D20= 128.1 (c=0.29, CHCh, 95% CI); IH NMR (300 MHz,

CDCh) 8: 6.96 (t, J=7.94 Hz, IH), 6.81 (d, J= 7.23 Hz, IH), 6.65 (d, J= 7.53 Hz, IH),

6.58 (d, J=5.13 Hz, IH), 3.85 (s, 3H), 3.73 (s, 4H), 3.46 (s, 3H), 3.40 (s, IH), 3.40 (s,

IH), 2.30 (s, IH), 2.01 (m, IH), 1.82 (m, IH), 1.69 (m, IH), 1.41 (m, IH), 1.25 (s, IH),

0.86 (m, IH) ppm; l3C NMR (150 MHz, CDCh) 8: 152.9, 146.8, 138.7, 134.4, 132.6,

124.0, 121.0, 111.6, 60.5, 58.5, 55.9, 52.1, 47.1, 38.8, 26.4, 23.1, 21.2, 14.3 ppm; mlz

(EI) 303 (M - H20, 21.2) 272 (9.5) 244 (7.4) 216 (100) HRMS calcd for C17H23N05:

303.1471 (M+ -H20); found 303.1469 (M+ -H20)

OH

NHBoc

341

Diester 337 (0.848 g, 1.6 mmol) was dissolved in 10 mL dry THF and cooled in an

ice/water bath~ Lithium aluminum hydride (0.153 g, 4.0 mmol) was added in one portion.

The mixture was stirred for 2 hours warming to room temperature. The reaction was

quenched by successively adding 0.15 mL water, 0.30 mL NaOH (15%), and 0.45 mL

water. The aluminum salts were filtered off and the resulting oil was concentrated and

chromatographed (1:2 Hex:EtOAc) yielding alcohol 341 (0.586 g, 1.5 mmol, 94 %) as a

thick colorless oil. Rf0.26 (1:2 Hex:EtOAc); [a]2oD 86.91 (MeOH); IH NMR (DMSO tf,

600 MHz) 8 6.89 (s, 2H), 6.54 (dd, J = 604, 1.8 Hz, IH), 6.00 (d, J = 8.7 Hz, IH), 5.56 (s,

IH), 4.70 (d, J = 5.3 Hz, IH), 4.54 (t, J = 5.4 Hz, IH), 4.18 (d, J = 3.7 Hz, IH), 3.78 (s,

3H), 3.68 (s, 3H), 3.16 (m, 4H), 1.97 (m, IH), 1.74 (m, IH), 1.32 (s, 9H), 1.12 (s, 2H)

ppm; l3C NMR (DMSO tf, 150 MHz) 8 155.5, 152.1, 146.0, 139.9, 136.6,.135.4, 124.0,

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122.3, 111.7, 77.7, 66.0, 61.5, 60.2, 56.0, 53.0, 37.1, 32.0, 28.7, 20.2 ppm; IR (film) v

3384,2938, 1696, 1577, 1472 cm-\ LRMS (EI) mlz 375 (m- H20), 321 (5.5),264 (20.2),

244 (14.9), 216 (100.0); HRMS calcd. for C2IH29NOs: 375.2046, found: 375.2039. Anal.

calcd. for C2IH3IN06 C 64.10, H 7.94, found: C 63.83, H 8.24.

/0

'0 0 )=0

N H

HO 6

To a solution of alcohol 341 (0.311 g, 0.79 mmol) in THF (10 mL) was added NaH

(0.019 g, 0.79 mmol). The mixture was stirred at room temperature for 10 hours. The

reaction was quenched with citric acid solution (10 % w/w, 5 mL). The aqueous phase

was separated and extracted with ether (2x20 mL). The crude material (271 mg) was

chromatographed on Si02 and chromatographed with 1: 1 hexanes/ethyl acetate as the

eluent. The product 6 (0.201 g, 0.63 mmol, 80 %) was isolated as a colorless oil.

RjO.2 (1:2 Hex:EtOAc); IH NMR (CDCh, 300 MHz) 0: 7.06 (t, J= 7.92 Hz, IH), 6.89

(d, J= 8.22 Hz, IH), 6.67 (dd, J= 7.65,1.17 Hz, IH), 5.87 (m, IH), 4.41 (m, IH), 4.16

(m, IH), 3.89 (s, 3H), 3.82 (s, 3H), 3.55 (t, J= 4.74 Hz, IH), 2.76 (bs, IH), 2.27 (m, IH),

1.67 (m, IH), 1.59 (m, IH), 1.40 (m, IH) ppm. BC NMR (CDCh, 75 MHz) 0 159.3,

152.9, 145.7, 134.7, 124.8, 121.0, 111.7, 71.6, 71.1, 67.3, 67.0, 61.9, 61.4, 55.8, 53.3,

42.1, 31.7, 31.2, 19.3, 14.2 ppm; IR (neat) v 3368,2936, 1747, 1576 cm-I; LRMS (EI)

mlz 301 (3.9),216 (49.1), 200 (14.1), 87 (87.3); HRMS calcd. for C17H2INOs: 301.1314,

found: 301.1310.

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5.5 Biotransformations

General procedure for small scale fermentation with E. coli JMI09(pDTG601)

Growth of colonies.

Agar plates consisted ofbactotryptone (10 giL), yeast extract (5 gIL), NaCl (5 gIL), agar

(30 giL), and ampicillin (100 mglL). E. coli JM109(pDTG60l) cells were streaked onto a

plate and incubated at 35 DC for 24 hours. A single colony was isolated for the preculture

preparations described in the following section.

Preculture.

Luria Bertani (LB) media consisted ofbactotryptone (10 gIL), yeast extract (5 gIL), NaCl

(5 giL), and ampicillin (100 mg/L). Three mL ofLB media was inoculated with a single

colony of E. coli JM 1 09 (pDTG60 1) and grown at 35 DC in an orbital shaker.

Fernbach shake flask.

Luria Bertani (LB) media consisted ofbactotryptone (10 gIL), yeast extract (5 gIL), NaCl

(5 giL), and ampicillin (100 mglL). A 3 L Fernbach shake flask was charged with 500

mL LB media and then inoculated with 1 mL of E. coli JMl09(pDTG60l) preculture

media. The inoculum was grown for 12 hours at 35 DC in an orbital shaker. The contents

of the shake flask were added to a 15 L Sartorius Biostat C fermentor and grown

according to literature procedure for 24 hours. 156

Substrate addition

500 mL of cell broth was- drained from the fermentor and the cells were separated by

centrifugation. The supernatant was drained off and the cells were re-suspended in 500

mL phosphate buffer (0.1 M) containing 2 gIL glucose. The substrate (200-400 gIL) was

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added neat or as a solution in isopropanol. Product formation was monitored by TLC

(hexane/EtOAc, 1: 1).

Product isolation

After 5 hours of incubation, the pH of the media was adjusted to 8.5 with NaOH (1 M)

and the supernatant was separated from the cells by centrifugation. The supernatant was

then extracted with EtOAc (3x500 mL). The extract was washed with saturated Na2C03

(100 mL) and brine (100 mL) and dried over anhydrous Na2S04. Ethyl acetate was

removed under reduced pressure and the crude material was purified by crystallization

(EtOAc/pentane) or flash colum chromatography.

Large scale fermentations

Large scale fermentations were performed according to literature procedure. 156

methyl 2-fluoro-5,6-dihydroxycyclohexa-l,3-dienecarboxylate (344):

Rf 0.15 (1:1 Hex:EtOAc); mp 74-76 °C (EtOAc); [at2o = +73.2 (c 1.05, MeOH); IH

NMR (CDCh, 600 MHz) 8 6.33 (m, IH), 5.94 (ddd, J = 10.2, 8.3,2.6 Hz, IH), 4.71 (t, J

= 6.2 Hz, IH), 4.55 (m, IH), 3.83 (s, 3H), 3.17 (bs, IH), 3.09 (brs, IH) ppm; l3C NMR

(CDCh, 150 MHz) 8 166.0 (d, J = 2.2 Hz), 163.2 (d, J = 281.0 Hz), 143.1 (d, J = 12.1

Hz), 119.6 (d, J = 36.2 Hz), 106.2 (d, J = 2.2 Hz), 69.0, 67.0 (d, J = 6.6 Hz), 52.2 ppm;

I9F NMR (CDCh, 282 MHz) 8 -92.6 (s) ppm; IR (film) 3558, 3025, 1694, 1439, 1401,

1040 cm-I; LRMS (EI) mlz 188 (15), 133 (44), 119 (49), 102 (100), 91 (37),90 (46), 86

(28), 74 (16), 46 (27); HRMS calcd. for CgH9F04 (Ml: 188.0485, found: 188.0484;

Anal. calcd. for CgH9F04: C, 51.07; H, 4.82, found: C, 51.18; H, 4.76.

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C02Me

CI~OH

UOH 348

methyl 2-chloro-5,6-dihydroxycyclohexa-l,3-dienecarboxylate (348):

Rf 0.25 (1:1 Hex:EtOAe); mp 107-109 °c (EtOAe); [a]D20 = +86.6 (e 1.0, CHCh); IH

NMR (CDCh, 600 MHz) () 6.35 (d, J= 9.8 Hz, IH), 6.03 (dd, J= 9.8,3.0 Hz, IH), 4.44

(m, IH), 4.31 (d,J= 6.0 Hz, IH), 3.83 (s, 3H), 2.50 (bs, 2H) ppm; BC NMR (CDCh, 150

MHz) () 164.8, 140.5, 127.8, 125.1, 124.0, 72.5, 67.4, 52.3 ppm; IR (KBr) 3422, 2959,

1721, 1578, 1444, 1270, 758 em-I; LRMS (EI) mlz [M-H20t: 188 (15), 186 (43), 157

(32), 155 (100), 99 (14); HRMS ealed. for CsH9CI04 [M-H20t 188.0084, found:

188.0077.

CI

Me02C~OH

UOH 349

methyl 2-chloro-3,4-dihydroxycyclohexa-l,5-dienecarboxylate (349):

Rf 0.18 (1:1 Hex:EtOAe); mp 107-109 °c (pentane-,-ethyl acetate); [a]D 20 = +36.9 (e 1.0,

CHCh); IH NMR (CDCh, 300 MHz) () 6.18 (ddd, J= 10.0,2.4, 1.2 Hz, IH), 6.01 (dd, J

= 10.0, 2.4 Hz, IH), 4.64 (ddd, J = 6.0, 4.7, 1.2 Hz, IH), 4.52 (ddt, J = 8.7, 6.0, 2.4 Hz,

IH), 3.86 (s, 3H), 2.76 (d, J = 9.6 Hz, IH), 2.60 (d, J = 4.7 Hz, IH) ppm; BC NMR

(CDCh, 150 MHz) () 166.3, 138.8, 138.5, 127.5, 123.8, 68.6, 67.7, 52.3 ppm; IR (KBr)

3398, 3459, 1698, 1317, 1057, 762 em-I; LRMS (EI) mlz: 204 (14), 173 (23), 172 (54),

155 (50), 146 (32), 145 (36), 144 (100), 143 (80), 139 (27), 99 (27), 81 (41),53 (25),51

(21); HRMS ealcd. for CsH9CI04: 204.0189, found: 204. 0190.

- 102-

Page 119: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

C02Me

Br~OH

U OH 352

methyl 2-bromo-5,6-dihydroxycyclohexa-l,3-dienecarboxylate (352):

Rf 0.18 (1:1 Hex:EtOAe); mp 106-109 °c (CHCh); IH NMR (CDCh, 600 MHz) 8 6.17

(dd, J = 10.0, 2.5 Hz, IH), 6.04 (ddd, J = 10.0, 2.5, 1.3 Hz, IH), 4.57 (m, IH), 4.49 (m,

IH), 3.85 (s, 3H), 3.00 (d, J = 7.9 Hz, IH), 2.97 (bs, IH) ppm; I3C NMR (CDCh, 150

MHz) 8 166.6, 137.5, 130.0, 128.0, 127.3, 68.4, 68.1, 52.3 ppm; IR (KBr) 3402, 1703,

1437, 1314, 1234, 1048 em-I; LRMS mlz: 248 (9), 218 (38),216 (47), 190 (82), 189 (53),

188 (85), 187 (48), 109 (71), 108 (31), 81 (100),65 (79), 59 (45), 53 (54); HRMS ealed.

for CSH9Br04: 247.9684, found: 247.9679.

methyl 3,4-dihydroxy-2-iodocyclohexa-l,5-dienecarboxylate (356):

IH NMR (600 MHz, CDCh) 8 6.19 (d, J= 9.8 Hz, IH), 6.11 (dd, J= 9.8, 3.8 Hz, IH),

4.42 (m, IH), 4.36 (t, J= 6.6 Hz, IH), 3.83 (s, 3H), 3.12 (brd, J= 7.6 Hz, IH), 2.59 (brd,

J = 7.2 Hz, IH) ppm; BC NMR (151 MHz, CDCb) 8 166.0, 134.3, 129.3, 123.9, 111.20,

67.2, 52.4 ppm; LRMS I: 296 (12), 278 (83), 264 (38), 247 (90), 231 (31), 137 (100), 109

(95), 92 (43), 81 (89), 63 (35), 59 (38), 53 (62); HRMS ealed for CsH9I04: 295.9546,

found: 295.9538.

- 103 -

Page 120: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

6 Selected Spectra

I

°1 I

- 104-

Page 121: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

ID proton

9.0 8.5 8.0 7.5

I~I ID carbon with proton

, 170 160

~ "" ~

150

7.0 6.5

decoupling

, 140

m co ,..: ~

I 130

I

6.0

a; O"i ~

I

~ ci ~

I

I 120

5.5

'" ... a;j

I

5.0

I 110

4.5

!~~

I 100

4.0

90

3.5 3.0

80

2.5 2.0 1.5 1.0 0.5 0.0 ppm

IJ')v"::::l"('t) (D~CO"r

criCV;NN co (0 co co

~I/

70 60 50 40 ppm

- 105 -

Page 122: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

>-' o 0'1

.... !XI o

.... ..... o

....

." o

.... g:

.... ~

.... w o

.... N o

.... .... o

.... 8

!XI o

CI

g

(II o

~ o

~

-155.40

_126.56 -124.72 -122.88 -121.04

~67.21

66.90 66.69 66.54 66.40 66.25 66.10

'

61.43 61.19 60.96 60.72

...,-50.59 .......... 50.48

-46.37

~25.35

24.76 24.56 24.43 24.29 24.16 24.03

__ 8.46 ---a.05

f-' P.

" Pl

" tr 0 i:l :;: .... rt i:l"

'0

" 0 rt 0 i:l

P. ro

" 0 .g f-' .... .E

to <:>

ex>

'" ex> <:>

:-J

'" :-J 0

'" '" g:

- ... ~'"

... <:>

--'" ~'"

'" <:>

., '" ., <:>

o

'" o <:> "0 "0 3

Co) ..... N

m -'" e z 0 Of I ~ (Dz 0

)=0 0

) "T1 '"

/"4.523 ,?---4.494 ~4.466

'-4.437

/"3.521 ,?---3.497

~~::~~

./1.463 "-1.439

1.414

f-' t:J

'0

" 0 rt 0 i:l

Page 123: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

ID proton

I 9.0 8.5 8.0 7.5

ID carbon with proton

I 180

I 170

'" cO ~

I

I 160

I 150

7.0 6.5

decoupling

I 140

I 130

6.0

I 120

5.5

I 110

5.0

I 100

I 4.5

....

I 90

I 4.0 3.5 3.0

~l~~) (~)~ vNNO> vNOIO r--:r--:r-.:cd ,...."'''' .....

"V/

I 80

I 70

2.5 2.0

I~( r--r--to'" -¢ct>

"'''' \/

[. t

60 50

1.5

ci

" I

I 40

1.0

I 30

I 0.5 0.0 ppm

"'''' """ "--:0

"'''' \/

"n

20 10 ppm

- 107-

Page 124: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

-o 00

.... C:I .... 8 .... g

.... .... C>

.... to! C>

... ~

.... .... C>

.... 8

'" C>

co C>

..... C>

en C>

g

~

to! C>

1:1 1:1 3

-156.14

___ 125.92 _124.08 -122.24 --120.40

.L... 77 . 31 ~77.10

76.89

{

62.0B 61.84 61.60 61.36

_55.61 --......54.84

-40.18

£22.64 21.41

,$-21.37

\

20.58 20.54 20.49 20.44

,.... p,

() IlJ '"! IT 0 ~

:;: /-'. rt p-

'0 '"! 0 rt g P, CD ()

~ I-' /-' . ~

lQ

'" b

0)

'" O)

b

.."

'" .." b

'" '" '" b

'" '" '" b

~~

... b

llL", 2.00 '"

~w IQ£=

b

'" '" ~~ ~

1:19:-" ~'"

b

p

'" o b

~

G /z, ~O ~

Co) coz 0 ~ )=0

0

> C1 ""Tl

W

,.... t:J

'0 '"! 0 rt 0 ~

;

4.518 4.489 4.461

-4.433

13.753

1'-3.666 3.623 3.614

~3.581

~3.569

\"\..3.466 ~3.422

3.147 -2.818

12.015 1.961 1.928 1.915 1.903

~1.862

~~:~~~ 1.826 1.818 1.519 1.479

Page 125: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

.... f-'

~I Q f-'

'" P. P.

CI () W ..... '0 III " .... a. cg 0

CO rT

CI 0 0 i:l _°'rrZ ° i:l

.... " ..... 1-' • 'en' CI rT ° (f ''0 P'

.... '0

'" " CI 0 ;l rT

I t::li 0 .... i:l ... -150.51 p., 6.119 CI CD 6.112 ()

~ 0 6.103

CI .§ rr5.824 f-' ... 1-'.

.... -131.60 tE 1][:: en Co> CI __ 0

0.98 A 4.798 .... 3.933 N -120.73 !" 3.921 CI en

1.01 2.403 .... 2.395 .... !" 2.388 CI

__ 0

0.98 2.378 .... .... 2.370 0 CI ... 2.363

2.356

:g-l I ~: 2.351 2.347 2.342

g:-l I .£.77.83 !" 2.337 en

~77.2B 2.333 77.07 2.325 76.86 Co> 2.322 Cl-l I 0 2.317

1.21'-- t: 2.312

g-j t 2.307 0.91,,- 2.303

_55.45 .1J!Ir N

r'" -54.61

g:-l I 1.07 0 2.294 2.165

.... 2.156

;!;-l I ... 2.147

2.137 .... 2.135

~-l I 0 2.126

2.117 0 1.944

-23.99 ... ~-l t 1.941

-18.53 1.934 1.930

Q1 I "C 1.925 "C 1.922 3

"C "tI ...... 3

0 \0

Page 126: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

--o

.... :g .... '" co

.... .... CO

.... :!l .... g: .... ~ .... ~

.... ~ .... .... CO

.... 8 CD CO

'" CO

~

... CO

g:

~

... CO

N ,CO

.... CO

1:1 1:1 3

I'=-

f----

I-' 0-

n Pl

~ ,. ,... (1"

~

'" ... '" ...

'0 .... ~ 2.52'-- ... (1"---

o~ P

~ n

~ >-' ,...

.... ... !" UI

.____128.71 S -127.66

... ... -----'

1.00 ~UI ...

---126.30

L77 • 26 77.04 76.83

~75.02 "-74.81

-56.35

........-47.34 ""'C 46 • 32

46.11 -41.37

/34.27 ../£31.40 y:. 31. 37

--.;;

26.27 26.14

,.,. /23.52 ~22.13

~;;:~i

1:20,87 20.79 20.76 16.44

0:92~ 1.15

~,. ________ UI

,. CO

2.iiiI !" --·UI

... ... N ...

~!" 1.87 co

~ .... 2.96 ... =--~ 2.55 .... 18.64 ... 6.25;::

~CO ... 1:1 1:1 3

Co.)

~ ZI

o==(

)=0 Z I

-6,,<

I-' 0-7.371

7.359 '0 7.347 'i 7.304 7.288 7.283 7.276 4.580 4.574 4.562 4.556 3.524 2.064 2.044 2.025 1.913 1. 906 1.902 1. 895 1. 891 1.883 1. 696 1. 678 1.659 1.512 1. 507 1. 502 1.497 1.482 1.477 1.445 1.319 1.303 1.290 1. 278 1.081 1.064 1. 060 1. 043 1. 027 0.991 0.980 0.961 0.953 0.930 0.918 0.903 0.891 0.881

,;V~:~i~ 0.806 0.795 0.733 0.725

o (1"

g

Page 127: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

f-' P.

~ Q 7.283 t:;:

Cl 5.069 ~

'" 5.063 'll ~

g~ I 0 fd 5.058 ~ i:l Co) "-°lrZ °

4.708 g

" 4.700 ,... '(J{ 4.694 ct

P' ° 0/'0 4.687

'" CO 4.673

~11 " 0 4.621 ct 0 4.607 i:l 4.600 p. 4.284 ro

i11 Cl .... 4.274 0 .§ 4.266

f-' 4.258 ,... 4.248

-148.33 S 2.392

~11 2.388

'" 2.365 2.361 2.326

___ 125.04

~HF _123.20

f"" -121.36 1.873 ----119.52 :iE:", 1.868

1.04'-1.860 1.854

811 ~ 1.850

1.01 1.805 1.791

.j>. 1.785 1.782

~-j t .........-79.98 1.777 ~77.25

77.04 1.773 76.83 1.764

{62 .• 3 too 1. 759

62.58 1.752 gH I 62.33

-............. 62.08 1. 751

58.38 1. 740 1.17'- 1. 735 .!!!1r 1. 701

~-j I 1.07\.. N 1. 697

2.iii'- 1. 678

Hb= 1. 674

<27.11 ~ I r'" 26.93 1.08 1.559

~H I -21.76 r -lB.75 11.553 1.542 1.537 1.286 1.281

co -l if

i1 l r· 276 1.264

I "tI II 1.259

"tI >-' 3

1.254 3

>-' .......

Page 128: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

...... ...... tv

cO o

~

~

'" o

~

~

iil

~

o

8

~

~

Cl

'" o

~

... o

'" o

~

o

o :g 3

... 0-----

....

-148.61

-132.25 _127.78 .___124.10

< 120.42 120.11

........... 116.74

~78.06 77.47 77.25 77.04 76.62

/"63.27 ,?--62.77 ~62.28

"-61.78 ........... 55.74

-27.07 -23.86

-18.45

f-' t!

Cl III I-j tr 0 ::t

0;: f-'. (""t

::r 'd I-j 0 ct 0 ::t

f5' Cl

~

~ 0

!'" '" co

'" ....,

'" ....,

'" f-' '" 1-'" 0, ::t to "i(i() _._.'"

'" 0.98

1][::: '" '" '" IE='"

2.12 ~ ...

'" ... '" '" '" '" '"

~!" 2.11 '" =-1.06 ='" 1.&L '"

'" '" o

'" o

'" :g 3

"T1 Q ~CCJ ,all. '-0 )-Z .. ,0

O ",}"" o 0

6.180 6.163 6.160 6.146 6.129 5.802 5.768 5.251 5.240 5.229 4.834 4.830 4.775 4.748 4.733 4.721 4.706 4.694 4.679 4.675 4.652 4.647 4.631 4.620 4.605 4.593 4.578 4.551 2.431 2.417 2.384 2.356 2.347 2.339 2.332 2.324 2.315 2.305 2.296 2.287 2.278 2.270 2.204 2.187 2.171 2.130 1.989 1.982 1.968 1.952 1.946 1.940 1.933

f-' t!

'd I-j o ct g

Page 129: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

ID proton

B 0

ecr ~NHBOC

~ 0

OTDS 11

f i I I I I I I I I I I I I I I I I 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0 ppm

I~~ (~I l~! l~! !§ll~! 1~~~r~II~1 ~l;1 (~I

- 113 -

Page 130: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

I

...... ...... ,.!:::.

_____ ~<oo< oo~ ___ O<_

'" o o

f-' ex> o

f-' en o

f-' .. o

f-'

'" o

f-' o o

ex> o

en o

.. o

'" o

o

~

!-

t--

t---

f-

~

~

~ f--

F=-

I,-

f-' 0. (J DJ

tJ. g .: 1-" rt ::r 'd Ii o rt o

-171.94 i:l 0. CD (J o .§

-155.48 f-' 1-"

-136.38

-125.57

J~~:~: 77.03 76.82

1'/74.03 :/,69.35 .y;66.74

l~~~~g 1/[4l.45

~34'21 34.10

~29.20

28.33 25.61

~;::~!

!"-;~:;;

20.22 20.14

lH:H 18.47 14.14 -1. 46

.g

1.00;::

0.98-

1.01 -

1.19=

3.47=

0.99 w

~t\J 1":57"-

1. 70

~ ~

~ ... 11. 41::=

~

~ ~o

~

--I o en

Qq" ~ OJ e.g ...

(')

o Z N

::r: s:: OJ (1) o ()

7.284 6.318 6.313 6.310 6.305 6.218 6.213 5.629 5.623 5.261 5.247 4.731 4.728 4.717 4.713 4.168 4.161 4.154 4.146 4.046 4.038 4.018 4.009 3.977 3.971 3.964 3.958 3.952 3.754 3.097 1. 930 1.924 1. 913 1. 902 1. 850 1. 841 1. 836 1. 833 1. 827 1. 818 1. 809 1.716 1. 710 1.702 1. 694 1. 688 1. 680 1. 671 1. 665 1. 647 1. 636 1.625 1. 614 1. 602 1. 591

"'\

-1.579 ''-1.570

1.475

lO.924 0.913 0.889 0.878

~UH 0.819 O. B12 0.153 0.122 0.107 0.089

f-' 0.

'd Ii o rt g

Page 131: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

.......

....... Ul

w o

~

'"' o

~

~

;---f---

r--

t--

~

!---

~

-155.22

-152.28

-146.24

-139.51

-134.55 -132.50

-124.11 -121.95

-111.83

./79.29 ~77.25 "-.77.03

76.82

-63.37 -60.58

__ 55.73 --54.?3 -52.05

-38.44

-34.44

./30.09

......... 28.36 ---28.00 -24.93

....... 20.47 ~20.45

"'= i~:~!

f-' P,

0 III

~ ~ 0

"' " .... :"' IT ::r

'<:I

8 rt~;..J g 1.07;:: a

g.0.97;::: o '" o . .g I-'

~·O.98;::: ~ LQ 0

'" '"

'" 0.96 0

in 1.14

"1.l2'-- ~ 3.08'\::: 0

3.03C

~w ~.

'"

0,

'" '"

!" 2.26 3.96 'i":"'2"6'= .... 9.06==i.n

1. 45:=

6.fi9'.... !"' 7.27/ a

?

~

.....

-I o CJJ 0-:.

Z I OJ o (")

/7.283

-;

6.980 6.967 6.954

<6.861 6.848

~6.639 6.638 6.627 6.625

<5.974 5.967

If ::m

J~4.282

~4.019

4.012 4.006 3.999 3.886 3.873 ~~:~~~

.........3.704 -3.683

"\

3.542 3.533 3.526 1.820 1. 802 1. 797 1.785 1. 729 1.722 1.711 1.705 1. 700 1. 693 1. 682 1. 670 1. 658 1. 650 1.555 1.544 1. 539 1. 534 1. 528 1.404 1.273 1. 216 0.975 0.969 0.963 0.958 0.940

f-' P,

'<:I

" o IT g

Page 132: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

lD proton

......... 0

'0

NHBoc

336

I I I I I 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 ppm

!§~!§~!~~ !~~ !~~ ~~! (~~ ~I~ ~1~1 I~I lD carbon with proton decoupling

Oi ~co co "''''''' NO I'-01'- N ... "' ... <Xl'" 0 (\Jm,.... ....... UJ UJC\I V 0> co 0 ~I'-~

t:: cON cD cxhocv) (Y')N ~ I";Lr.!ct:!~"":"!~""':~"": "": ~ ... ~ "'"' ~ ~~~ ~~ Olt-- ............. COUJ'I"'""(Olt)"I"'"" 0 cieri"":

...... ,.... ............. r.....CO(OLOUJUJ ... NNN

\ I I \ \ / \/ ",\V \ \ \// I \1/

.,., ,J, .J. hi, 1 J l.u 1,,1 ,">L .11,

" "n .". .'", " " 'I II"

I I I I I I I I I I I I I I I I I I I I I I I 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 .10 o ppm

- 116-

Page 133: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

---....l

'" 6

'" o o

I-'

~

I-'

'" o

I-'

;; I-'

'" o

I-'

'" o

I-'

~

:;: o

::; o

I-' I-' o

I-' o o

~

'" o

.., o

g:

g:

... o

w o

'" o

I-' o

~

I-' P. o III

~ o

-J

U1

::> -J

~~~ rT·~ P"~

'O~'" Ii . o U1 rT o ::> '" ft~;" 0---........­o

-157.97,g U1

-152.38 ~ 1I1

::> -146.11 lO -I lJ1

-140.69 0.94 -135.28 ~ a -132.46

124.41 If!:.,

"::::::::124.19 ~ U1 -""""'121.68 ~

-111.72

./79.64 ~77.25 ",,=77.04

76.83

__ 66.65 __ 63.33 -60.56 ../""55.75 -54.84

138.41 34.44 34.33

l~u~ "'.f::.28.38 ./"24.93

L 20 . S1

~~~u~

18.68 18.65 17.23

~15.29 ,,'-1.03

\:-2.20 -2.86

... ~;" ~ 1.02.c: LV

~u, ~ ~

LV

o

tv

U1

tv

o 2.49

~I-' 9.03 == U1

6.03\.-- I-'

6.78r ;"

2.91\.....

o U1

3.01r 0

o

~

~ U)

Z I

'"

i~:~~~ 6.977 6.964

!/;6.864 6.851

",;6.622 y6.609

A5 . 993 5.984

f4.836 4.828 4.295 4.291 4.287 3.871 3.760 3.716 3.702 3.605 3.601 3.587 3.583

11

3 . 410

~~jg 1.806 1.803 1.780 1.711 1.700 1.688 1.677 1.666 1.654

f1.449 1.415

It~H 0.954 0.933

1[0.930 -0.920 0.919 0.909 0.902 0.891 0.885 0.875

,

0.188 0.156 0.142 0.135 0.126 0.088

I-' P.

'0 Ii o rT

g

Page 134: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

f~ >-'

~~ 6.987 t:l

U ... U jJ 6.969 'd

" 6.961 Ii 0

6.943 ("t

~~ ¥.6.849

0

~~l ~ t:J

6.845

1J2l-Jt.:6.822

iill'-6.818

~~ r'" '" z f? 6.709

I :s:: 6.689

» CD 6.684

~~ r 0 6.659 6.655 6.634 6.629 6.572

t::~ ~6.567 6.552

~6.547 5.295

g:~ r3.863 3.852 3.779 3.743

~~

~:~: 2.764

'j t 2.077

~o 2.065

~ 2.054

~ 2.047

~'" 2.033

~'" 2.023 1.920 1.912 1.907

ld(:l ~ roo 1.879 1.870 1.857

r 1.848 1.838 1.825

1.05 ~1 } f1.761

__ 0 1.748

1dL 1.720

1.03 1.708 ~1.696

Ji~ll 1.463

- ;] I 1.432

- '{1.422

00 1.251 0.917 0.892

Page 135: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

--\D

'" .... a

'" g

,

~

t"--

!'---~

~

I-' 0-

n

'" 8-g >1 1-'. rt P"

'0 .... o rt g r; n o

<C o

co

'" co o

.....

'" 5 5 . 4 6.§ 1.00""'"" :-"' 52. 21 ~.lQ!.,... 0

46.00Jj 0.92 C>

139.89 136.55 135.37

124.01 122.33

-111. 74

__ 79.64 -77.69

ji;65.98

~61.51

60.59 60.20

-/"55.95

~.//"~~:~i '/"40.39

40.25 40.12 39.98

~~~:~~ 39.56

~37.05 32.02

~28.74

28.24 20.24

'"

'" '" '" o

0.72 ....

1.02 '"

3.13'- b ~ ~ 3.10 !'"

----'" 1.00

0.74 ~

1.01

'" '" --'" .1QLo

2.20 ~

9.31 '"

o

~

~

Z I OJ o (")

\ o

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~6.972

,6.881

"\

6.857 6.678 6.654

-5.886

-4.567 -4.386

l ~::~=======================================-__ ~3.877 -3.805 ~3.564

""'- 3.498 3.477

---3.239 -2.991

};~:~~~ 2.204

J'l1:~~! ;;"1.926

,k1:~~~

,H~i 1.565 1.534 1.402

I-' tl

'0 .... o rt

g

Page 136: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

g -11

f-' p,

()

III

~ -11

~ ...., g IJl

:c \ f::: "

0

f-'

f-'.

P,

;'1.00:= -..]

o 7.061 '0 ..,

~-11-

'00:98""'-;;'

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en

rr

at"j-K

g

8" 0. 7Or

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/r159.33 P,

IJl

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CD

6.666

~ -It

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0

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4.414

~.~O 135.27 lQ

4.284

E-1 t-

134.70 0.66 ~

4.254

¥ri;~:~!

4.239

IJl

4.224

l124.81

4.142

~121.17

4.130

IJl

4.120

~H I

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~111.72

0

4.112

111. 68

4.105

77.25 ~ ...

4.097

77.04

3.894

t 76 . 83 DK'"

3.850

~ -II

r71. 68 o:'i'l""=

3.819

l.35"" I;1K'!'"

3.785 3.780

67.30

~o

3.753

f1Ur 67.20

0.92f..

3.750

~-I~

66.95 1.55

3.745

65.90 0. 85T ~

3.738

~64.01

0.87 IJl

~3.559

~61.88

3.551

~61.39 w

3.544

1: 61.17 0

\3.508

60.74 0.69:::

3.497

60.42

3.486

tv

2.062 2.038 2.034 2.025 2.016

55.79 '" 2.007

~~r-

~-I~

"\\\L55.74 55.65

0.82

~~ 53.26

~o

~~\L42. 09 1.17----

2.003

- ;11

31. 73 1.34,..- f-'

f'" N

31.16

1.622

0

29.59 ~'"

1.604

21. 07 0.65~

1.593

f''' ~:

1.579

19.29

~1.413

16.85

__ 0

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1.287

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'0 S

~1.263 0.955 0.942 0.930

Page 137: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

ld proton

~ ~~~~~~:ri~~~~~~~~~~ N f"lf"lf"lf"lI"'lI""lf"'lMMf"lO'\O\O\O\O'\O\O'\

I I I I I 8.5 8.0 7.5 7.0 6.5 6.0 5.5

1:( 15( ld carbon with proton decoupling

I 190 180 170

.. .-i" O.-iN

", .. N

"''''''' .-i.-i.-i

\1/

Il L

160 150

ON N.-i

"'''' ~~

V

140 I

130

~~ mm .-i.-i .-i.-i

V

120

I

\O\OLfllllr-lLfl o;fIMNr-r-u> r-r-r-IOLOLO

~1P

I 5.0 4.5

I:~:( ... "! ~ .-i

I

110 100 90

'" I

I I 4.0 3.5 3.0

I~I ~~I " .. '" mo", NO'" m.-iO

"' ...... r-r-r- \0\01.0

\V \V

80 70 60

I 2.5

... N

:;:

I

I 50

I 2.0

I 40

1.5 1.0 ppm

30 20 ppm

- 121 -

Page 138: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

ID proton

I 8.5 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 ppm

I~~~( )~~§! I~( I~~~! 1d carbon with proton decoupling

'" roro ,....., '" ..,.., NN ,...,...'" ro,... N '" ri riM riri ,...,...,...

"'''' ltl N

I V I I \V \/ I I

I I I I I I I I I I I I I I I I I I I I I

200 190 1S0 170 160 150 140 l30 120 110 100 90 SO 70 60 50 40 30 20 10 ppm

- 122-

Page 139: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

ld proton

I I 8.5 8.0 7.5

lJ1 CD

'" " I

I 7.0

O(Ylo;;flO'lCO(Y1 COI..OI..OLI1o;;11'<;11 M(010000

I I 6.5 6.0

1:11:1 ld carbon with proton decoupling

0 0

'" "! .. 0

~ :':

I I

I l

I 5.5 5.0

OM" "'rlO

<- on ..

'" '" '" rl rl rl

\\/

co 0'\ 0'\ N 1..0 r-- r-- L!l I..OMN LfltnM 00'\ '<tlMM 0'10000 LI1o;;f1

0;;11'<;11 '<:;fI MrTlM MM

\ V \\1 V

I I I 4.5 4.0 3.5

I:~:I ~:( !!'J o:t' N r-I 0 NO 0:) 10 ""

r-- L""- \0 N 1"-t'"- t'"- t'"- t"- \0

"VII

210 200 190 180 170 160 150 140 130 120 110 100 90 80 70

I 3.0

<-M

'" on

I

60 50

I 2.5

40

lJ1 en rl

'" I

30

I 2.0

20

I

MOO["-oLn l'MN..--i NC\lNC'\l

ri..--lr-lrl

"'-,\1/

I 1.5 1.0

10

ppm

ppm

- 123 -

Page 140: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

Id proton

I I I I I I I I I I I I I I I I 8.5 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 ppm

I:I:~ (:1:1 lsi I~( Id carbon with proton decoupling

~ '" .-l,..'"

'" 00," I.fI.;IIMr-Il:"- N NOa)'<ttrl '" ,..

0"'''' '" r--r:--\OCOIXl ~ '" '" ~~~ .-l .-l r--r--r--\OI.O '" I I \\1 \V V I

I I I f I I I 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 ppm

- 124-

Page 141: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

1d proton

:ri N

" I

I

Me02C~OH

UOH 356

8.5 8.0 7.5 7.0

[,-r-Io:fr--COr-l r-IOo:fr""lNN NNr-Irlrlrl

\0\0\0 \D \D\D

'\\)//

I 6.5 6.0

(:l~ 1d carbon with proton decoupling

<I' <I' 0 01

'" <I'

'" 01 ri ri

I I

1. I I I I

200 180 160 140

I 5.5 5.0

01 ri tIl 01 '" '" '" 01 ri

'" '" ri ri ri ri

I I I

1. I

120

\OOOOI.OLtl """ MO """ ~ " ""'''<jIcncor-- "'., .,,, '"'0 ;:; "''''''MMf'l "'OO '"''"' """ <:11"'..,<:1' .... MM MM NN N '"' "\\1" II \I V I I

I I I I I 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 ppm

EI~ !~~ 1:1 1:1

['U)<qI(TlOO <Xl NooommN ... r--r--I..OI.I)Ii'lt"'- '" r--r--r--r--r--I..D tIl

~r/ I

I I I I I I

100 80 60 40 20 0 ppm

- 125 -

Page 142: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

7 References

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Page 148: Development of Thermally Stable Versions of the Burgess ... · Figure 47-Rice's synthesis of cyclization precursor 190 35 Figure 48-Final transformations in Rice's formal synthesis

8 Vita Thomas A. Metcalf was born in Albion, NY on December 18, 1984. He and his

three siblings Lynn, Benjamin, and Anna were raised by their parents, Michael and Kay

Metcalf on their family farm. He attended Albion High School and graduated with the

second highest GPA in the class of 2003. During his high school years, Thomas was a

member of the Albion Cross Country and Albion Track and Field teams. The highlight of

his running career was a second place finish in the Western New York steeple chase

finals in 2002. Throughout school, he was active in the Boy Scouts of America and

attained the rank of Eagle Scout in 2002. After graduation from high school, he attended

the University of Guelph in Guelph, Ontario, Canada. He completed a BSc. in Biological

Chemistry in 2007. In 2007, he completed an undergraduate thesis under the direction of

Dr. Adrian Schwan. Upon completion of his BSc., Thomas moved to Brock University in

St. Catharines, Ontario, Canada to pursue graduate studies under the direction of Dr.

Tomas Hudlicky. He is presently working towards a Master's degree in Organic

Chemistry. His research interests include developing more stable versions of the Burgess

reagent and the application ofbiotransformations in the synthesis of natural products.

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