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PROTEIN SYNTHESIS 2/21/19

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Page 1: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PROTEIN SYNTHESIS2/21/19

Page 2: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PAGE 104

DO NOW▸What are 3 differences between DNA and

RNA?

▸What is the central dogma of molecular biology?

Page 3: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

AGENDA▸ Transcription

▸ Translation

▸ Summary

Page 4: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PROTEIN SYNTHESISCORNELL NOTES TITLE (PAGE 105)

Page 5: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PAGE 105

PROTEIN SYNTHESIS▸ Process of assembling proteins using the

information encoded in DNA

Page 6: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PROTEIN SYNTHESISThe Steps of How to Make Proteins

Page 7: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Genetic info only flows from:

DNAà RNA à Protein

DNA RNA PROTEIN

Page 8: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

!8

Protein Synthesis

1. Transcription

2. Translation

Page 9: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Transcriptioncomes from the word transcribe.

To transcribe something means to copy it in another way.

Hint: Court transcriber

Page 10: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

DNA RNA PROTEIN

DNA à RNA = Transcription

Transcription

Page 11: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PAGE 105

TRANSCRIPTION▸ Genetic information is passed from DNA in

the nucleus to mRNA

▸ Transcription: DNA -> RNA

Page 12: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

But why do we need to make a new copy?

*DNA always stays in the nucleus!

*Ribosomes, the protein-making machines, are in the cytoplasm!

Nucleus

DNA à RNA = Transcription

Page 13: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PAGE 105

TRANSCRIPTION STEPS▸ RNA Polymerase (enzyme) unwinds DNA and makes

a matching mRNA

▸ T->A, A->U

▸ pre-mRNA: introns (“useless” code) + exons (codes for gene)

▸ Introns get spliced out, so the final mRNA has exons only

▸ mRNA leaves the nucleus out into the cytoplasm, to a ribosome.

Page 14: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Step 1: RNA Polymerase (enzyme) unwinds DNA.

T A T A

TA TA

A G C T C G A A C G G A

TCCGTTCGAGCT

A G

C

TC G A A C G G

A

TC

CGTTCGAG

CT

3’ 5’

5’ 3’

RNA polymerase

DNA à RNA = Transcription

Page 15: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Step 2: RNA Polymerase also makes a matching messenger RNA (mRNA).

T A T A

TA TA

A G

C

TC G A A C G G

A

TC

CGTTCGAG

CT

3’ 5’

5’ 3’

UCCGUUCGAGCRNA polymerase

mRNA

Note:

It matches A to U (uracil)

instead of T (thymine)!!

DNA à RNA = Transcription

Page 16: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

* There are useless DNA codes called INTRONS that get spliced out. The pieces that are left, called EXONS, form the actual mRNA.

Pre-mRNA:UCCGGAG UAACAG U GG A

intron intron

exonexon exon

GAG UAA

mRNA:

UCCG C

Exons are expressed!

DNA à RNA = Transcription

Page 17: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Step 3: mRNA leaves the nucleus out into the cytoplasm, to a ribosome.

T A T A

TA TA

A G

C

TC G A A C G G

A3’ 5’

5’ 3’

UCCGUUCGAGC

mRNA

TC

CGTTCGAG

CT

A G C T C G A A C G G A

TCCGTTCGAGCT

DNA à RNA = Transcription

Page 18: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Translationcomes from the word translate.

To translate something means to change it into another language.

translationHey, what’s up?

What do you want to eat?

Hola, que tal?

Que quieres comer?

Page 19: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

DNA RNA PROTEIN

Translation

RNAà Protein = Translation

Page 20: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PAGE 105

TRANSLATION▸ Genetic information is passed from RNA to

make proteins in the ribosomes

▸ Translation: RNA -> protein

Page 21: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

But why do we need to translate RNA?

RNA

A,U,G,C (nucleotides)

Pro, met, ser, val, leu, met…

(amino acids)

PROTEIN

RNAà Protein = Translation

Page 22: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

!22

NUCLEOTIDES AND AMINO ACIDS ARE COMPLETELY

DIFFERENT MOLECULES!!!

Page 23: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PAGE 105

TRANSLATION STEPS▸1. Ribosome reads every 3 nucleotides,

called CODONS (1 codon = 3 nucleotides)

▸Ribosomes starts translating when it reads the codon “AUG.”

▸2. Transfer RNA (tRNA) brings an amino acid for each codon.

▸ tRNA has an anticodon that matches the codon

Page 24: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

*tRNA has an ANTICODON that matches the codon on the mRNA.

amino acid attachment site

U A C

anticodon

Page 25: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PAGE 105

TRANSLATION STEPS▸ 3. Amino acids connect to make a Protein!

▸ 4. Ribosome stops translating at a STOP codon (UAA , UAG , or UGA ).

Page 26: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Step 1. Ribosome (rRNA) reads every 3 nucleotides, called CODONS.

(1 codon = 3 nucleotides)

ribosome

C GUU CG A GC UU C C A G U G U U A A

RNAà Protein = Translation

mRNA

Page 27: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Step 2. It starts translating when it reads the codon “AUG.”

ribosome

RNAà Protein = Translation

START

C GUU CG A GC UU C C A G U G U U A AmRNA

Page 28: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Step 3. Transfer RNA (tRNA) brings an amino acid for each codon.

ribosome

START

tRNARNAà Protein = Translation

C GUU CG A GC UU C C A G U G U U A AmRNA

Page 29: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

Step 4. Amino acids connect to make a Protein!

ribosome

tRNA

met

RNAà Protein = Translation

C GUU CG A GC UU C C A G U G U U A AmRNA

Page 30: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ribosome

met

tRNARNAà Protein = Translation

STARTC GUU CG A GC UU C C A G U G U U A A

mRNA

Page 31: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ribosome

met

tRNA

pro

RNAà Protein = Translation

STARTC GUU CG A GC UU C C A G U G U U A A

mRNA

Page 32: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ribosome

met pro

tRNARNAà Protein = Translation

STARTC GUU CG A GC UU C C A G U G U U A A

mRNA

Page 33: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ribosome

met pro

tRNA

ser

RNAà Protein = Translation

STARTC GUU CG A GC UU C C A G U G U U A A

mRNA

Page 34: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ribosome

met pro ser

tRNARNAà Protein = Translation

STARTC GUU CG A GC UU C C A G U G U U A A

mRNA

Page 35: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ribosome

met pro ser

tRNA

gly

RNAà Protein = Translation

STARTC GUU CG A GC UU C C A G U G U U A A

mRNA

Page 36: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ribosome

met pro ser gly

STOP

5. Ribosome stops translating at a STOP codon (UAA , UAG , or UGA ).

RNAà Protein = Translation

STARTC GUU CG A GC UU C C A G U G U U A A

mRNA

Page 37: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ribosome

met pro ser gly

STOP

RNAà Protein = Translation

START

5. Ribosome stops translating at a STOP codon (UAA , UAG , or UGA ).

C GUU CG A GC UU C C A G U G U U A AmRNA

Page 38: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

A protein is made!met pro gly val

STOP

RNAà Protein = Translation

STARTC GUU CG A GC UU C C A G U G U U A A

mRNA

Page 39: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

What happens to the protein, after it is made?

• It travels in the Rough Endoplasmic Reticulum (E.R.) (Hallways)

• Then gets packaged & delivered in Golgi Apparatus (Office Aides)

Page 40: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM
Page 41: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

VIDEO

▸ https://www.youtube.com/watch?v=oefAI2x2CQM

Page 42: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

-VIDEO SHEET-SUMMARY

-TRANSCRIPTION AND TRANSLATION: ANALOGY STORY - PART 4 ONLY

Page 43: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

ILLUSTRATIVE SUMMARY

Page 44: day7 Protein Synthesis · 2019. 2. 25. · day7_Protein Synthesis Author: WAI Created Date: 2/22/2019 10:05:57 PM

PAGE 104

ILLUSTRATIVE SUMMARY▸ At least 4 colors

▸Must LABEL

▸Must include ALL terms

▸ If you’re doing a diagram or flow chart, you must EXPLAIN the flow chart