anti-cancer effect of a quinoxaline derivative gk13 as a transglutaminase 2 inhibitor
TRANSCRIPT
ORIGINAL PAPER
Anti-cancer effect of a quinoxaline derivative GK13as a transglutaminase 2 inhibitor
Seon-Hyeong Lee • Nayeon Kim • Se-Jin Kim •
Jaewhan Song • Young-Dae Gong • Soo-Youl Kim
Received: 28 January 2013 / Accepted: 27 March 2013 / Published online: 21 April 2013
� Springer-Verlag Berlin Heidelberg 2013
Abstract
Purpose Transglutaminase 2 (TGase 2), a cross-linking
enzyme, plays an important role in both pro-survival and
anti-apoptosis during oncogenesis. For instance, TGase 2
induces NF-jB activation through I-jBa polymerization,
which leads to the increase of pro-survival factors such as
BCl-2. TGase 2 also suppresses apoptosis via depletion of
caspase 3 and cathepsin D. Therefore, a specific TGase 2
inhibitor may become a very useful treatment for cancer
showing high levels of TGase 2 expression.
Methods By small-molecule library screening, we man-
aged to locate a competitive TGase 2 inhibiting quinoxa-
line compound (GK13) from 50 other quinoxaline
derivatives. The 50 compounds that were screened repre-
sent a thousand structurally diverse, potentially pharma-
ceutical heterocyclic compound libraries, including
benzopyrans, oxadiazoles, thiadiazoles, and quinoxalines.
By measuring GI50, TGI, and LC50 using SRB assay,
GK13 was selected.
Results In vitro enzyme kinetics using guinea pig liver
TGase 2 showed that IC50 value was about 16.4 E-6 M.
GK13 inhibits TGase 2-mediated I-jBa polymerization in
a dose-dependent manner. LC50 of GK13 showed greater
efficacy as 4.3E-4 M than LC50 of doxorubicin that
showed efficacy as 3.87E-3 M in NCC72 composing 11
tissue origins and 72 cancer cell lines.
Conclusion GK13 showed a possibility that quinoxaline
derivatives may be effective for anti-cancer activity via
TGase 2 inhibition.
Keywords Quinoxaline derivative � Transglutaminase 2 �Apoptosis � Anti-cancer drug
Introduction
Transglutaminase 2 (TGase 2, E.C. 2.3.2.13, protein–glu-
tamine c-glutamyltransferase) is a calcium-dependent
cross-linking enzyme making isopeptide bonds between
protein-bound glutamine and protein-bound lysine and
ubiquitous expression (Folk 1980). These covalent e-(c-
glutamyl) lysine cross-links are stable and resistant to
enzymatic, chemical, and mechanical disruption that is
widely used in many biological systems for generic tissue
stabilization purposes or immediate defenses for infection
(Iismaa et al. 2009; Kim 2011). TGase 2 activates NF-jB
via an IKK-independent pathway involving I-jBa poly-
merization (Lee et al. 2004). Since the treatment of cancer
cells with TGase 2 inhibitors reduced NF-jB activity in a
dose-dependent manner, blocking of TGase 2 activity can
be suggested as a novel strategy to ameliorate NF-jB-
mediated cancer progression (Kim et al. 2006, 2009a;
Verma and Mehta 2007; Gupta et al. 2010; Lin et al. 2011;
Shao et al. 2009). Previously, we have reported that TGase
2 plays an important role of NF-jB activation (Kim 2011).
TGase 2 inhibition, indeed, has a huge benefit on many
cases of inflammatory diseases (Kim 2006). However,
S.-H. Lee � J. Song
Department of Biochemistry, Yonsei University,
Seoul, Republic of Korea
S.-H. Lee � S.-J. Kim � S.-Y. Kim (&)
Cancer Cell and Molecular Biology Branch, Division of Basic
Science, Research Institute, National Cancer Center,
Goyang, Kyonggi-do, Republic of Korea
e-mail: [email protected]
N. Kim � Y.-D. Gong (&)
Innovative Drug Library Research Center, Dongguk University,
Pil-dong 3-ga, Jung-gu, Seoul, Republic of Korea
e-mail: [email protected]
123
J Cancer Res Clin Oncol (2013) 139:1279–1294
DOI 10.1007/s00432-013-1433-1
TGase 2 has another very important protective role in
tissue damage by blocking caspase 3 (Delhase et al.
2012) or cathepsin D (Kim et al. 2011) to prevent
apoptotic process. Due to the loss of this protective role,
TGase 2 knockout mice are more vulnerable to septic
shock such as TNF-a treatment in the liver tissue than in
the liver of wild-type mice (Yoo et al. 2013). TGase
2-mediated protective role was adopted by cancer cells
for survival. We also found that knockout of TGase 2
expression using siRNA of TGase 2 induces apoptosis
efficiently on renal cell carcinoma (unpublished).
Therefore, TGase 2 inhibitors may be useful for certain
type of cancer therapeutics.
Many groups developed TGase 2 inhibitors that are
competitive amine inhibitors, reversible inhibitors, and
irreversible inhibitors. A review about TGase 2 inhibitors
was reported by Siegel (Siegel and Khosla 2007). Poly-
amines are good TGase 2 substrates modifying proteins
via cross-linking (Folk et al. 1980). Therefore, poly-
amines can be used as competitive TGase 2 inhibitors,
such as cystamine, at very high concentrations. Com-
petitive peptidic TGase 2 inhibitor mimicking natural
protein substrate demonstrated anti-inflammatory effect
(Sohn et al. 2003). Cinnamoyl triazole derivatives as
reversible inhibitors were competing with acyl donor
TGase 2 substrates (Pardin et al. 2008). Dipeptide-based
sulfonium peptidylmethylketones derived from 6-diazo-
5-oxo-L-norleucine (DON) were introduced as water-
soluble inhibitors of extracellular TGase 2 (Griffin et al.
2008). PQP-(DON)-LPF-aldehydes were developed via
structure-based study as TGase 2 inhibitor (Siegel et al.
2007). There are also various irreversible active-site
TGase 2 inhibitors (Lorand and Graham 2003). Recent
results showed ZM 39923, ZM 449829, tyrphostin 47,
and vitamin K were found as TGase 2 inhibitors in part a
thiol-dependent mechanism (Lai et al. 2008). However,
none of them have been tested as a cancer sensitizer or
for anti-cancer effects. There was a report about dihyd-
roisoxazole derivative KCC009 as a TGase 2 inhibitor
against glioblastoma tumors (Yuan et al. 2007; Choi
et al. 2005). KCC009 treatment with anti-cancer drug
decreased tumor size based on weight by 50 % compared
to the control (Yuan et al. 2007). However, specificity
of KCC009 against TGase 2 was not warranted for ani-
mal experiments because IC50 of KCC009 was over
100 lM.
We found out a hit of competitive TGase 2 inhibitor
GK13 among 1,000 structurally diverse and druggable,
heterocyclic compound libraries, including quinoxaline
(Gong et al. 2011), benzopyrans (Lee and Gong 2012),
oxadiazoles and thiadiazoles (Gong and Lee 2010), and
quinoxalines produced by Gong’s laboratory. We have
tested GK13 for anti-cancer activity using various
cancer cell lines. After cell line screening, the hollow
fiber assay was performed using selected cell lines. We
have established 18 cell lines for hollow fiber assay in
NCC. We adopted the screening panel including 12 cell
lines from stomach and liver in addition to NCI 60,
called NCC72 (Kim 2010). We found that TGase 2
inhibitor may have anti-cancer effect in various cancer
cells.
Methods
Cell culture and reagents
NCI 60 cell lines were obtained from NCI (MTA Number:
2702-09). The National Cancer Center (NCC) 72 cell lines
were composed of 60 NCI cells (Shoemaker 2006),
including 10 lung cancer cells, 6 ovarian cancer cells, 5
CNS cancer cells, 6 hematopoietic cancer cells, 7 colon
cancer cells, 8 renal cancer cells, 8 melanomas, 5 breast
cancer cells, 2 prostate cancer cells, and 12 NCC cells
including 7 stomach cancer cells (SNU-16, Kato-III, SNU-
216, MKN-28, MKN-45, SNU-484, and SNU-668), and 5
liver cancer cells (Hep3B, Huh7, SNU-354, SNU-423, and
SNU-449) (Ku and Park 2005). Those were cultured in 5 %
CO2 and 100 % humidity at 37 �C in complete RPMI 1640
containing 10 % fetal bovine serum. Cell cultures were
passaged using trypsin–EDTA to detach cell. Doxorubicin
was purchased from Sigma and GK13 was obtained from
the drug synthesis. Compounds were dissolved in DMSO
and diluted into complete medium before addition to cell
culture. Cystamine (Sigma-Aldrich) and Z006 (Zedira)
were purchased.
SRB test
For SRB test, cells are incubated into 96-well microtiter
plates in 100 ll from 5,000 to 40,000 cells/well depending
on the doubling time of individual cell lines. After 24 h,
drugs were prepared for the appropriate concentration
(100 lM) and added 100 ll to each well, and cultures were
incubated for 48 h at 37 �C. Fixation was done by adding
50 ll of 50 and 80 % cold trichloroacetic acid (TCA) for
adherent cell lines and for suspension cell lines, respec-
tively. The plate is incubated for a minimum of 1 h and a
maximum of 3 h at 4 �C. After 1 h, it removed the liquid
from the plate and rinsed the plate 5 times with water.
Then, the plate is dried at room temperature (R.T.) for
approximately 12–24 h. The fixed cells are stained with
100 ll sulforhodamine B (SRB) for 5 min at R.T. After
staining, the plate is washed 3 times with 1 % glacial acetic
1280 J Cancer Res Clin Oncol (2013) 139:1279–1294
123
acid and is dried at R.T. for approximately 12–24 h. The
SRB stain is solubilized with 10 mM Trizma base and the
absorbance is read at a wavelength of 515 nm. The effect
of drug was expressed as GI50 (50 % growth inhibition),
TGI (total growth inhibition), and LC50 (lethal
concentration).
Immunoblotting
Nuclear protein extraction is prepared using a CelLytic
NuCLEAR Extraction Kit (Sigma). Proteins were isolated
to 4–12 % SDS-polyacrylamide gel (Invitrogen) and
transferred to PVDF membranes (Bio-Rad). Membranes
were blocked in TBS-T (TBS containing 0.1 % Tween 20)
containing 5 % BSA for 1 h at R.T. and then incubated
with primary antibody overnight at 4 �C. Membranes were
washed in TBS-T at R.T. for 1 h and incubated with
horseradish peroxidase-conjugated secondary antibody in
TBS-T containing 1 % BSA for 1 h at R.T. Finally,
membranes were washed in TBS-T for 1 h at R.T. Proteins
were detected using enhanced chemiluminescence (Pierce).
General for synthesis
All chemicals were reagent grade and used as purchased.
Reactions were monitored by thin layer chromatography
(TLC) analysis using Merck silica gel 60 F-254 thin layer
plates or attenuated total reflection Fourier transform
infrared (ATR-FTIR) analysis using TravelIRTM (SensIR
Technology). Flash column chromatography was carried
out on Merck silica gel 60 (230–400 mesh). The crude
products were purified by parallel chromatography using
Quad3TM. 1H NMR and 13C NMR spectra were recorded in
d units relative to deuterated solvent as an internal refer-
ence using a Bruker 500 MHz NMR instrument. Liquid
chromatography–mass spectrometry (LC–MS) analysis
was performed on an electrospray ionization (ESI) mass
spectrometer with photodiode-array detector (PDA)
detection. LC–MS area percentage purities of all products
were determined by LC peak area analysis (XTerraMS C18
column, 4.6 mm 9 100 mm; PDA detector at 200–400
nm; gradient, 5–95 % CH3CN/H2O). High-resolution mass
spectrometry fast-atom bombardment (HRMS-FAB) spec-
tra were obtained using API 4000Q TRAP LC/MS/MS
system (Applied Biosystems).
Synthetic procedures for the preparation of 2-(phenyl-
ethynyl)-3-(2-(pyrrolidin-1-yl) ethoxy) quinoxaline (lead
compound GK13).
Synthesis of quinoxaline-2,3-diol (2) A solution of
benzene-2,3-diamine (1) (5.0 g, 45.8 mmol) and oxalic
acid (4.8 g, 53.3 mmol) in 3 N aq. HCl (100 ml) was
stirred at reflux condition for 24 h. The resulting mixture
was filtered and then washed with cold water and dried in a
vacuum oven at 50 �C. The desired product 2, quinoxaline-
2,3-diol, was obtained in good yield (89 %, 6.7 g). 1H
NMR (500 MHz, DMSO) d 7.13 (m, 1H), 7.46 (dd,
J = 1.4, 6.3 Hz, 1H), 8.07 (m, 1H), 11.98 (s, 1H), 12.33 (s,
1H); MS (ESI) m/z 163 ([M ? H]?).
Synthesis of 2,3-dichloroquinoxaline (3): To a stirred
solution of quinoxaline-2,3-diol (2) (4.2 g, 26.0 mmol) in
chloroform (CHCl3, 100 ml) were added thionyl chloride
(9.3 g, 78.0 mmol) and N,N-dimethylformamide (DMF,
0.5 ml) at reflux condition for 24 h. The resulting mixture
was concentrated in vacuo to remove the solvent and then
water was added. The desired product was filtered and
washed with water and dried in a vacuum oven at 50 �C.
The desired product 3, 2,3-dichloroquinoxaline, was
obtained in good yield (78 %, 4.8 g). 1H NMR (500 MHz,
DMSO) d 7.81 (m, 1H), 8.43 (dd, J = 6.6, 1.7 Hz, 1H),
9.19 (dd, J = 3.1, 1.5 Hz, 1H); MS (ESI) m/z 200
([M ? H]?).
Synthesis of 2-chloro-3-(phenylethynyl)quinoxaline (4):
To a stirred solution of 2,3-dichloroquinoxaline (3) (4.76 g,
18.5 mmol) in dimethylsulfoxide (DMSO, 2 ml) solution
were added phenylacetylene (2.3 ml, 21.3 mmol), trieth-
ylamine (18.0 ml, 129.6 mmol), palladium(II) acetate
(290 mg, 1.3 mmol), copper(I) iodide (437 mg, 1.7 mmol)
and triphenylphosphine (388 mg, 2.0 mmol) at 80 �C for
2 h. The resulting mixture was concentrated in vacuum to
remove the solvent and then water was added. The mixture
was extracted with ethyl acetate and the organic layer was
washed with water and dried over MgSO4. After removal
of solvent in vacuum, the residue was purified by SiO2
column chromatography (CH2Cl2:n-hexane = 3:2) to yield
the desired compound 4, 2-chloro-3-(phenylethynyl)quin-
oxaline (83 %, 4.6 g). 1H NMR (500 MHz, CDCl3) d 7.46
(m, 6H), 7.73 (m, 6H), 8.34 (d, J = 8.3 Hz, 2H), 9.19 (dd,
J = 2.31, 1.8 Hz, 2H); MS (ESI) m/z 265 ([M ? H]?).
Synthesis of 2-(phenylethynyl)-3-(2-(pyrrolidin-1-
yl)ethoxy) quinoxaline (lead compound, GK13): To a
stirred solution of 2-(pyrrolidin-1-yl)ethanol (1.34 g,
11.6 mmol) in tetrahydrofuran (THF; 10 ml) solution was
added sodium hydride dispersion (60 %) in mineral oil
(743 mg, 18.6 mmol) at R.T. for 20 min, after which THF
(10 ml) solution of the prepared compound 4,2-chloro-3-
(phenylethynyl)quinoxaline (2.47 g, 9.3 mmol), was
dropped for 1 h. Stirring was continued at R.T. for 8 h. The
resulting mixture was concentrated in vacuo to remove the
solvent and then water was added. The mixture was
extracted with ethyl acetate and the organic layer was
washed with water and dried over MgSO4. After removal
of solvent in vacuo, the residue was purified by SiO2 col-
umn chromatography (CH2Cl2:ethanol = 9:1) to yield
(83.1 %, 3.35 g) the desired compound GK13, 2-(phe-
nylethynyl)-3-(2-(pyrrolidin-1-yl)ethoxy)quinoxaline: 1H
NMR (500 MHz, CDCl3) d 1.81 (s, 4H), 2.77 (s, 4H), 3.05
J Cancer Res Clin Oncol (2013) 139:1279–1294 1281
123
(t, J = 5.7 Hz, 2H), 4.72 (t, J = 5.7 Hz, 2H), 7.40-7.42 (m,
3H), 7.56 (t, J = 4.2 Hz, 1H), 7.65 (dd, J = 1.8, 6.3 Hz,
2H), 8.95 (dd, J = 1.8, 2.4 Hz, 1H); MS (ESI) m/z 344
([M ? H]?).
TGase activity assay
The inhibitory effect of each compound on TGase 2
activity was determined by measuring the incorporation of
[1,4-14C] putrescine into succinylated casein. Following a
10-min pre-incubation of 1.0 milliunits (mU) of TGase 2
from guinea pig liver (Sigma) with various concentrations
of GK13 in 0.1 ml of reaction buffer solution with or
without 10 mM CaCl2, 0.4 ml of substrate solution con-
taining 2 % of succinylated casein and 100 nCi of [1,4-14C]
putrescine was added. After incubation at 37 �C for 1 h,
the reaction was terminated by the addition of 4 ml of cold
(4 �C) 7.5 % (w/v) TCA. TCA-insoluble precipitates were
collected in GF/A glass fiber filters (Millipore), washed
with cold 5 % (w/v) TCA, dried, and assessed for the
incorporation of radiolabel using a scintillation counter
(Beckman Coulter). TGase 2 pre-incubated with buffer
alone was used as the positive control. The scintillation
counts were compared with that of the positive control, and
the IC50 value was determined using a logistic linear
regression method. The data were presented as the means
of three independent experiments.
In vitro inhibitory effect of GK13 on I-jBacross-linking by TGase 2
For polymerization of I-jBa by TGase 2, purified recom-
binant I-jBa (0.5 lg) was incubated with TGase 2 in 20 ll
reaction buffer (0.1 M Tris–Cl, pH 8.0, 0.15 M NaCl, and
10 mM CaCl2) at 37 �C for 1 h. To examine the inhibitory
effect of GK13 on polymerization of I-jBa by TGase 2,
0 20 40 60 80 100 1200
20
40
60
80
100
120
IC50: 16.4 E-6M
I-κBα
TGase 2
+ + + + +
- + + + +
GK13 0 0 0.5 0.1 0.05 μM
I-κBαmonomer
a
b
c
0 1 2 4 8 16 (µM)
I- B
-actin
d
TG
a se
2ac
tivity
(com
par a
tive,
%)
Fig. 1 Inhibitory effect of
GK13 on TGase 2 activity. The
process of GK13 synthesis was
introduced in method section
(a). IC50 of GK13 is 16.4E-
6 M (b). For the analysis,
guinea pig liver TGase 2,
succinylated casein, and C14-
putrescine were employed for
competition with GK13.
Competition assay using GK13
reversed free I-jBa level dose-
dependently in TGase
2-mediated I-jBa depletion (c).
GK13 treatment for 12 h in
Hep3B cells rescued depletion
of I-jBa in a dose-dependent
manner (d)
1282 J Cancer Res Clin Oncol (2013) 139:1279–1294
123
Fig. 2 Cytotoxic effect made comparison between GK13 and
doxorubicin. NCC 72-cell line screen data (GI50, TGI, and LC50
values) for GK13 against a panel of human cancer cell lines. The
midline of each portion of the graph represents the mean for that
endpoint, calculated across all 72 cell lines. This mean value is then
subtracted from the value for each individual cell line and plotted.
Cell lines more sensitive to GK13 are visualized as bars deflecting to
the right, while more resistant cell lines have bars extending to the
left of the mean. Average GI50 over all cell lines are 5.92E-5 M.
Average TGI over all cell lines are 5.22E-5 M. Average LC50 over
all cell lines are 4.3E-4 M (a). Dose–response curves for GK13.
Three endpoints (negative log10 of the concentration inhibiting the
growth of 50 % of the cells (GI50), total growth inhibition (TGI) and
negative log10 concentration need to kill 50 % of the cells (LC50)h)
are calculated from 7-log dose–response curves for compounds tested
using 72 human tumor cell line screen. A leukemia, B lung, C colon,
D CNS, E melanoma, F ovarian, G renal, H prostate, I breast, J liver,
K stomach (b). NCC 72-cell line screen data (GI50, TGI, and LC50
values) for doxorubicin against a panel of human cancer cell lines (c).
Average GI50 over all cell lines are 6.68E-6 M. Average TGI over
all cell lines are 5.58-5M. Average LC50 over all cell lines are
3.87E-3 M. Dose–response curves for doxorubicin. A leukemia,
B lung, C colon, D CNS, E melanoma, F ovarian, G renal, H prostate,
I breast, J liver, K stomach (d)
J Cancer Res Clin Oncol (2013) 139:1279–1294 1283
123
GK13 (0.05, 0.1, 0.5 lM) was pre-incubated with 0.5 mU
TGase 2 in 20 ll reaction mixture (0.1 M Tris–Cl, pH 8.0,
and 0.15 M NaCl) at 37 �C for 10 min. After pre-incuba-
tion, purified I-jBa (0.5 lg) and CaCl2 (10 mM final
concentration) were added, and the mixture was incubated
at 37 �C for 1 h.
Hollow fiber assay
Efficacy was evaluated in vivo using a hollow fiber animal
model in which polyvinylidene fluoride (PVDF) hollow
fibers containing cancer cell lines (OVCAR-5, SW620,
U251, UACC62) in triplicate were implanted subcutane-
ously and intraperitoneally into mice as described previ-
ously (Hollingshead et al. 1995). Briefly, PVDF hollow
fibers with 1.0-mm inner diameter and a molecular weight
cutoff point of 500 kD (S9320101: Spectrum Laboratories,
Rancho Dominquez, CA) were individually flushed and
incubated in 70 % ethanol at R.T. for [72 h. After being
washed with deionized water, the fibers are autoclaved and
flushed with RPMI 1640 (WelGENE, Daegu, Korea) con-
taining 20 % FBS (WelGENE, Daegu, Korea). The cancer
cell lines (OVCAR-5, SW620, U251, UACC62), which
were grown in RPMI 1640 containing 10 % FBS, were
Fig. 2 continued
1284 J Cancer Res Clin Oncol (2013) 139:1279–1294
123
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration(Molar)
A
CCRF-CEM
HL-60(TB)
K-562
MOLT-4
RPMI-8226
SR-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration(Molar)
BA549/ATCC
EKVX
HOP-62
HOP-92
NCI-H226
NCI-H23
NCI-H322M
NCI-H460
NCI-H522
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration(Molar)
C
COLO 205
HCC-2998
HCT-116
HCT-15
HT29
KM12
SW-620 -100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration(Molar)
D
SF-268
SF-295
SF-539
SNB-19
SNB-75
U251
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration(Molar)
E LOX IMVI
MALME-3M
M14
MDA-MB-435
SK-MEL-2
SK-MEL_28
SK-MEL-5
UACC-257
UACC-62-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration(Molar)
F
IGR-OV1
OVCAR-3
OVCAR-4
OVCAR-5
OVCAR-8
NCI/ADR-RES
SK-OV-3
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration(Molar)
G
786-O
A498
ACHN
CAKI-1
RXF 393
SN12C
TK-10
UO-31-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration(Molar)
H
PC-3
DU-145
b
Fig. 2 continued
J Cancer Res Clin Oncol (2013) 139:1279–1294 1285
123
harvested with trypsin/EDTA, pelleted by centrifugation,
suspended in conditioned medium, and diluted with RPMI
1640 containing 20 % FBS (inoculation density
2–10 9 106/ml). The fibers were filled with the cell sus-
pension via a 20 gauge needle. Each fiber was then heat-
sealed by clamping preheated smooth-jawed needle-hold-
ers across the fiber every 2 cm along its length. The sam-
ples were incubated for 1 or 2 nights at 37 �C in a 5 % CO2
incubators prior to implantation into mice. Three subcuta-
neous fibers were implanted by caudally inserting a trocar
containing the fibers through a skin incision made at the
nape of the neck of each 7–8-week Balb/C (nu/nu) female
mouse (Orient Bio, Sungnam, Korea), after inhalational
isoflurane (Choongwae, Seoul, Korea) anesthesia. Three
intraperitoneal fibers were inserted into the peritoneal
cavity of the same mouse in a craniocaudal direction using
an incision through the abdominal wall. Two layers of
sutures were used to close the abdominal incision.
GK13 treatment (50 mg/kg) was started 3 or 4 days
after implantation of fibers into mice. As a positive control,
30 mg/kg of paclitaxel (Bristol-Meyers Squibb Korea,
Seoul, Korea), diluted as 3 mg/ml, was given to mice
intraperitoneally for 4 consecutive days. Mice were killed
the next day after the last drug treatment. MTT (3-[4,5-
dimethylthiazol-2-yl]-2,5-diphenyltetrazolium bromide)
dye conversion assay was performed to define the viable
cell mass within the fiber.
Analysis of apoptosis induced by GK13
by fluorescence-activated cell sorting (FACS)
Analysis of annexin V binding was carried out using an
Annexin V-FITC Apoptosis Detection Kit (BD Biosci-
ences), according to the manufacturer’s instructions.
Briefly, cells were collected, washed twice with cold PBS,
and then subjected to centrifugation at 1,500 rpm for
5 min. The cell pellet was resuspended in 19 binding
buffer at a concentration of 1 9 106 cells per ml, and then
100 ll of the cell suspension was transferred to a 5 ml
culture tube, to which 5 ll of annexin V-FITC and 5 ll of
PI were added. The cells were gently vortexed and then
incubated for 15 min at R.T. in the dark. Finally, 400 ll of
19 binding buffer was added to each tube and the samples
were analyzed by flow cytometry. For each sample, 10,000
ungated events were acquired; PI(-)/annexin(?) cells
were taken as the early apoptotic population.
Annexin V-FITC/PI double-staining assay
Cells were washed three times with cold PBS and trans-
ferred to 100 ll of 19 binding buffer (Annexin V-FITC
Apoptosis Detection Kit, BD Biosciences) with 1 lg/ll of
DAPI, 5 ll of annexin V-FITC, and 5 ll of PI for 15 min
at R.T. in the dark. After incubation, the cells were washed
three times in binding buffer and then mounted on glass
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
K
SNU-16
KATO
SNU-216
MKN-28
MKN-45
SNU-484
SNU-668
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
J
Hep3B
Huh7
SNU-354
SNU-423
SNU-449
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
I
MCF7
MDA231
MDA468
HS578T
BT-549
T-47D
Mean Values
GI50 5.92E-5M
TGI 5.22E-5M
LC50 4.3E-4M
Fig. 2 continued
1286 J Cancer Res Clin Oncol (2013) 139:1279–1294
123
slides. The slides were examined with Zeiss Axiovert 200 M
microscope (Carl Zeiss Microimaging, Thornwood, NY).
Results
GK13 showed TGase 2 inhibition activity
We have screened TGase 2 inhibitor in DGG drug library
developed by Gong et al. After third-round screening, we
have narrowed down to quinoxaline derivative of
2-(phenylethynyl)-3-(2-(pyrrolidin-1-yl) ethoxy)quinoxa-
line (GK13) as a hit compound of TGase 2 inhibitor
(Fig. 1a). The synthesis of GK13 compound was explained
in the method section. In in vitro enzyme kinetics using
guinea pig liver TGase 2, IC50 value was obtained as
16.4 lM against putrescine (Fig. 1b). GK13 inhibits TGase
2-mediated I-jBa polymerization in a dose-dependent
manner (Fig. 1c). GK13 treatment in Hep3B rescued also
I-jBa level in a dose-dependent manner (Fig. 1d).
Fig. 2 continued
J Cancer Res Clin Oncol (2013) 139:1279–1294 1287
123
GK13 showed anti-cancer effect on 72 cancer cell lines
GK13 has been tested for anti-cancer effect using 72 cancer
cell lines (NCC 72): NCI 60 cancer cell lines; and 7
stomach cancer cell lines including SNU16, Kato-III, SNU-
216, MKN-28, MKN-45, SNU-484, and SNU-668; and 5
liver cancer cell lines including Hep3B, Huh7, SNU-354,
SNU-423, and SNU-449. Interestingly, GK13 showed
moderate anti-cancer effect throughout the cancer cell
lines. In the aspects of GI50, TGI, and LC50, GK13
showed good anti-cancer effects especially in colon and
renal cancer cell lines (Fig. 2a), while doxorubicin as a
positive control showed good anti-cancer effects in
melanoma, CNS, and renal cancer cells (Fig. 2c). GK13
showed about 10 times less GI50 than doxorubicin showed
(Fig. 2b, d). However, GK13 showed almost the same
effect of TGI and 10 times better effect of LC50 when
compared to the doxorubicin.
GK13 showed anti-cancer effect on hollow fiber assay
on U251 and UACC62
After in vitro screening process, further evaluation in
in vivo models of the compounds identified as anti-cancer
was needed as the next step prior to further development.
However, the cost, time, and expense of running
Fig. 2 continued
1288 J Cancer Res Clin Oncol (2013) 139:1279–1294
123
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
A
CCRF-CEM
HL-60(TB)
K-562
MOLT-4
RPMI-8226
SR-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
BA549/ATCC
EKVX
HOP-62
HOP-92
NCI-H226
NCI-H23
NCI-H322M
NCI-H460
NCI-H522
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
C
COLO 205
HCC-2998
HCT-116
HCT-15
HT29
KM12
SW-620 -100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
D
SF-268
SF-295
SF-539
SNB-19
SNB-75
U251
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
ELOX IMVI
MALME-3M
M14
MDA-MB-435
SK-MEL-2
SK-MEL_28
SK-MEL-5
UACC-257
UACC-62
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
F
IGR-OV1
OVCAR-3
OVCAR-4
OVCAR-5
OVCAR-8
NCI/ADR-RES
SK-OV-3
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
H
PC-3
DU-145
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
G
786-O
A498
ACHN
CAKI-1
RXF 393
SN12C
TK-10
UO-31
d
Fig. 2 continued
J Cancer Res Clin Oncol (2013) 139:1279–1294 1289
123
conventional xenograft models with empirical dosing
strategies for all such lead compounds, or developing
pharmacokinetic assays for each compound to be evaluated
in vivo, would be critical rate limiting step. To address this
problem, a short-term in vivo assay was developed by NCI
people (Hollingshead et al. 1995) in which cells growing in
polyvinylidene fluoride (PVDF) ‘‘hollow fibers’’ are placed
in various body compartments of mice. The anti-cancer
effect of GK13 has been tested using hollow fiber assay, as
a semi-in vivo assay, using four different cancer cell lines,
including OVCAR5 (ovary cancer), SW620 (colon cancer),
U251 (CNS), and UACC62 (melanoma). The cancer cell
lines are cultivated and harvested by standard trypsiniza-
tion technique and resuspended at the desired cell density.
The cell suspension is flushed into 1 mm (internal diame-
ter) polyvinylidene fluoride hollow fibers with a molecular
weight exclusion of 500 kDa. The hollow fibers are
implanted into mouse with 3 intraperitoneal implants (1 of
each tumor line) and 3 subcutaneous implants (1 of each
tumor line). Mice are treated with experimental agents
starting on day 3 or 4 following fiber implantation and
continuing daily for 4 days. The fibers are collected from
the mice on the day following the fourth compound treat-
ment and subjected to the stable endpoint MTT assay
(details in the method). Interestingly, GK13 showed good
anti-cancer effect on U251 and UACC62 (Fig. 3). This
result concords to the result from SRB test in Fig. 2.
GK13 treatment induced apoptosis
U251 and UACC62 cells were treated with or without
GK13 for 6 h. Apoptosis was measured by flow cytometric
analysis using annexin V–PI staining (Fig. 4a). The total
apoptotic cells (early and late-stage apoptosis) were over
twofold increased in U251 and over sevenfold increased in
UACC62 by FACS analysis (Fig. 4a). The cells treated
with GK13 were stained with annexin V-FITC and PI and
examined by fluorescence microscopy. Early apoptotic
cells stained with annexin V appeared green colored and
PI-stained cells (red) were observed (Fig. 4b).
Anti-cancer effect of TGase 2 inhibitors or
Wnt/b-catenin inhibitor compared to GK13
To compare anti-cancer effect of TGase 2 inhibitor GK13
against various TGase 2 inhibitors such as KCC009 (Yuan
et al. 2007), cystamine (Caccamo et al. 2010), and Z006
(Verhaar et al. 2011), UACC62 cell was treated with the
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
K
SNU-16
KATO
SNU-216
MKN-28
MKN-45
SNU-484
SNU-668
-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
J
Hep3B
Huh7
SNU-354
SNU-423
SNU-449-100
-50
0
50
100
150
0 -10 -9 -8 -7 -6 -5 -4
Per
cent
Gro
wth
Log10 of Sample Concentration (Molar)
I
MCF7
MDA231
MDA468
HS578T
BT-549
T-47D
Mean Values
GI50 6.68E-6M
TGI 5.58-5M
LC50 3.87E-3M
Fig. 2 continued
1290 J Cancer Res Clin Oncol (2013) 139:1279–1294
123
indicated concentration of GK13 or TGase 2 inhibitors.
Cell viability using SRB assay showed that GK13 has 10
times greater anti-cancer effect that others have (Fig. 5a).
GK13 may trigger growth inhibition through Wnt/b-
catenin inhibition due to the structural similarity (Gong
et al. 2011). To clarify this possibility in cancer cell lines,
we employed Wnt/b-catenin signaling inhibitor such as
cardamonin to test whether Wnt inhibition mimics GK13
effect in cancer cells. However, Wnt/b-catenin signaling
inhibition did not fully mimic GK13 inhibition in
UACC62 that presents sensitive growth inhibition on
GK13 treatment (Fig. 5b). Figure 5 shows us that GK13
presents cell growth inhibitory effect that appears to affect
TGase 2 activity rather than affecting Wnt/b-catenin
activity.
Discussion
Previously, Dr. Rich’s group reported a small molecule
derived from dihydroisoxazole KCC009 containing a
TGase 2 inhibitory effect, which showed increase of anti-
cancer drug sensitivity against glioblastoma tumors (Yuan
et al. 2007; Choi et al. 2005) and lung cancer cells (Frese-
Schaper et al. 2010). Although IC50 of KCC009 was over
100 lM, KCC009 demonstrated that TGase 2 inhibition
has a benefit to increase chemosensitivity (Yuan et al.
2007; Frese-Schaper et al. 2010). Following the discovery
that TGase 2 can activate NF-jB activity (Lee et al. 2004)
as well as extend NF-jB activation (Park et al. 2011)
through depletion of I-jBa via cross-linking (Lee et al.
2004; Park et al. 2006), several groups, including us, have
0.0
50.0
100.0
150.0
Con
trol
GK
13
Tax
ol
Con
trol
GK
13
Tax
ol
Con
trol
GK
13
Tax
ol
Con
trol
GK
13
Tax
ol
OVCAR5 SW620 U251 UACC62
Hollow Fiber (S.C.)
0.0
50.0
100.0
150.0
Con
trol
GK
13
Tax
ol
Con
trol
GK
13
Tax
ol
Con
trol
GK
13
Tax
ol
Con
trol
GK
13
Tax
ol
OVCAR5 SW620 U251 UACC62
Hollow Fiber (I.P.)
Fig. 3 Hollow fiber assay using
GK13. The hollow fibers were
implanted in subcutaneous
(S.C.), and intraperitonial (I.P.).
GK13 treatment (50 mg/kg) was
started 3 or 4 days after
implantation of fibers into mice
intraperitoneally for 4
consecutive days. When mice
were killed the next day after
the last drug treatment, hollow
fibers were recovered for MTT
assay (detailed in ‘‘Methods’’)
J Cancer Res Clin Oncol (2013) 139:1279–1294 1291
123
GGK13, 0 µM GK13, 16 µM
U25
1U
AC
C62
9.65% 55.53%
7.8% 61.57%
16 µM0 µM 16 µM0 µM
U251 UACC62
Ann
exin
VP
IM
erge
DA
PI
a
b
Fig. 4 Inhibition of TGase2 by
GK13-induced apoptosis.
Annexin V–PI staining of
GK13-treated U251 and
UACC62 cells. The cells treated
with or without GK13 for 6 h.
Apoptosis was further measured
by flow cytometric analysis (a).
The total apoptotic cells (early-
and late-stage apoptosis) are
represented by the right side of
the panel. Fluorescence
micrographs of the cells treated
with GK13. Cells, treated with
GK13, were stained with
annexin V-FITC and PI and
examined by fluorescence
microscopy (b). Original
magnifications 9200. For
16 lM GK13 treatment, early
apoptotic cells stained with
annexin V appeared green
colored. PI-stained cells (red)
were seen
1292 J Cancer Res Clin Oncol (2013) 139:1279–1294
123
reported therapeutic possibilities of TGase 2 inhibitors as
an anti-cancer drug sensitizer (Kim et al. 2006; Mann et al.
2006). Inhibition of TGase 2 turned out to increase anti-
cancer drug sensitivity because TGase 2 can activate NF-
jB, which has been previously demonstrated using cysta-
mine with doxorubicin (Kim et al. 2006). We have also
found a safe natural product containing the TGase 2
inhibitory effect, which is glucosamine. Glucosamine also
showed an anti-cancer sensitization effect in use with
doxorubicin (Kim et al. 2009a). The effective concentra-
tion of glucosamine cannot be reached in the serum level
by oral administration. However, via infusion administra-
tion, glucosamine was shown to have an anti-cancer effect
on Walker 256 carcinoma (Molnar and Bekesi 1972).
To improve specificity and efficacy of TGase 2 inhibi-
tion in cancer, we have tried to obtain proper lead com-
pounds by screening the small-molecule library from Dr.
Gong. We found that the quinoxaline derivative GK13
contains its TGase 2 inhibitory effect in vitro as well as in
cell. In this study, we found a lead compound of TGase 2
inhibitor, GK13, which showed IC50 about 16 lM using
purified guinea pig liver TGase 2. In theory, based upon
our findings of TGase 2-mediated NF-jB activation, TGase
2 inhibition may trigger cell death in cancer cells due to
decrease of NF-jB down stream including BCl-2 (Kim
et al. 2009b). To test whether TGase 2 inhibition alone may
influence cell growth and survival, we have tested GK13 on
NCC72 cell lines composing 11 tissue origins and 72
cancer cell lines. Interestingly, LC50 of GK13 showed
greater efficacy as 4.3E-4 M than LC50 of doxorubicin
that showed efficacy as 3.87E-3 M (Fig. 2). In hollow
fiber assay, GK13 showed distinguishable growth inhibi-
tion of CNS and melanoma cell lines (Fig. 3). This result
implicated that GK13 potentially has a good PK character
in an animal’s physiological condition.
In conclusion, previously, a small molecule containing a
TGase 2 inhibitory effect demonstrated anti-cancer drug
sensitivity under high concentration of KCC009
(*500 lM for 48 h) (Frese-Schaper et al. 2010) due to
less specificity. In our study, we introduced a quinoxaline
derivative, containing a TGase 2 inhibitory effect, which
presented anti-cancer effects approximately in the 10 lM
range. Further development may increase specificity as
well as anti-cancer effects in the near future.
Acknowledgments This work was supported by a research grant
(NCC1110011-2) from the National Cancer Center in Korea to S.Y.K.
and National R&D Program for Cancer Control (No. 1020050) in
Korea to Y.D.G. We declare that none of the authors have a financial
interest related to this work, and none of the authors have any
financial support beyond the research grant mentioned above.
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