1 introduction microbes transfer energy by moving electrons. - electrons move from substrate...

34
1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein carriers, and then onto oxygen or an alternative electron acceptor. Glucose NADH + FADH2 -> ETS in plasma membranes O 2 In soil, organisms tranfer electrons to Metals such as Fe 3+ . Some bacteria can donate electrons to electrodes and power a fuel cell

Upload: april-rosamund-powell

Post on 11-Jan-2016

212 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

1

IntroductionMicrobes transfer energy by moving electrons.

- Electrons move from substrate molecules onto energy carriers, then onto membrane protein carriers, and then onto oxygen or an alternative electron acceptor.

• Glucose NADH + FADH2 -> ETS in plasma membranes O2

• In soil, organisms tranfer electrons to Metals such as Fe3+.

• Some bacteria can donate electrons • to electrodes and power a fuel cell

Page 2: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

2

What is an electron transport system

(EST)?

Where is EST located?

What is a protonmotive force?

How are ATP generated?

What is oxidative phophorylation?

Page 3: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

33

The Electron Transport Chain

Series of electron carriers transfer electrons from NADH and FADH2 to a terminal electron acceptor

Page 4: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

4

A respiratory electron transport system includes at least 3 functional components:

1) An initial substrate oxidoreductase (or dehydrogenase)

2) A mobile electron carrier

3) A terminal oxidase

The ETS can be summarized as such:

Oxidoreductase Protein Complexes

Page 5: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

5

Coenzymes and cofactors are associated with oxidoreductase protein complexes and assist in moving electrons from NADH and FADH2 to O2

Page 6: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

6

Bacteria Cytoplasmic membraneEukaryotes Mitochondrial membrane

• Flavoproteins (FMNFMNH2)• Iron-sulfur proteins (Fe3+ Fe2+ )• Quinone (Q QH2 )• Cytochromes (Fe3+ Fe2+ )

Electron Transport Systems (ETS) is present in membrane

Electrons flow in cascading fashion from one carrier to an another carrier in membranes to a terminal electron acceptor

Page 7: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

7

ETS Function within a Membrane

Page 8: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

8

• Large difference in reduction potential between donor (NADH) and O2

(acceptor), a large amount of energy is released.

• Free energy change is proportional to reduction-potential difference between a donor and an acceptor (G =nFEo

’ ).

Page 9: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

9

A Bacterial ETS for Aerobic substrate Oxidation

Electron transfer is accompanied by the build up of protons across inner mitochondrial membrane

Page 10: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

10

Mitochondrial ETC

Page 11: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

11

In redox reactions, the G values are proportional to the reduction potential (E) between the oxidized form (e– acceptor) and its reduce form (e– donor)

- The reduction potential is a measure of the tendency of a molecule to accept electrons.

A reaction is favored by positive values of E, which yield negative values of G.

The standard reduction potential assumes all reactants and products equal 1 M at pH = 7.

Reduction potential and Free energy

Page 12: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

12

Page 13: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

13

Proton Motive Force

The electron transport system generates a “proton motive force” that drives protons across the membrane.

- The PMF stores energy to make ATP.

Page 14: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

14

The transfer of H+ through a proton pump generates an electrochemical gradient of protons, called a proton motive force.

The Proton Motive Force

- It drives the conversion of ADP to ATP through ATP synthase.

- This process is known as the chemiosmotic theory.

Page 15: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

15

When protons are pumped across the membrane, energy is stored in two different forms:

• The electrical potential () arises from the

separation of charge between the cytoplasm

and solution outside the cell membrane.

• The pH difference (pH is the log ratio of external to internal chemical concentration of H+.

The relationship between the two components of the proton potential p is given by:

p = – 60pH

The Proton Motive Force

Page 16: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

16

Besides ATP synthesis, p drives many cell processes including: rotation of flagella, uptake of nutrients, and efflux of toxic drugs.

p Drives Many Cell Functions

Figure 14.9

Page 17: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

17

The electron transport proteins are called oxidoreductases.

They oxidize or extract electrons from a substrate (NADH, FADH2, H2, or Fe2+) and transfer them to next electron carrier in the membrane.

- Thus, they carry out discrete redox-reactions while electrons flow from one donor to next acceptor

Electron flow from a carrier with negative redox-potential to a carrier with positive redox-potential to a terminal electron acceptor

This flow of electrons results the generation of proton motive force across the membrane

The ETS: Summary

Page 18: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

18

A respiratory electron transport system includes at least 3 functional components:

1) An initial substrate oxidoreductase (or dehydrogenase)

2) A mobile electron carrier

3) A terminal oxidase

The ETS can be summarized as such:

Oxidoreductase Protein Complexes

Page 19: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

19

The oxidation of NADH and reduction of Q is coupled to pumping 4H+ across the membrane.

1) The substrate dehydrogenase receives a pair of electrons from an organic substrate, such as glucose, NADH, H2.

2) It donates the electrons ultimately to Flavoprotein (FMN/FMNH2) and Iron sulfur (Fe3+/Fe2+).

glucoseamino acidsfatty acidsnuleic acidsH2

Fe2+

NA

DH

-dehydrogenase com

plex

Page 20: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

20

Electrons from NADH-dehydrogenase complex

3) A mobile electron carrier, such as quinone pickups 2e- from previous electron donor and 2H+ cytoplasm (Q/QH2).

- There are many quinones, each with a different side chain; so for simplicity they are collectively referred to as Q and QH2.

Page 21: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

21

4) A terminal oxidase complex, which typically includes cytochromes, receive two electrons from quinol (QH2).

The 2H+ are translocated outside the membrane.

In addition, the transfer of the two electrons through the terminal oxidase complex is coupled to the pumping of 2H+.

- Totally 4 electrons are translocated across the membrane

Page 22: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

22

5) The terminal oxidase complex transfers the electrons to a terminal electron acceptor, such as O

Each oxygen atom receives two electrons and combines with two protons from the cytoplasm to form one molecule of H2O.

1/2 O2 + 2H+ → H2O

Thus, the E. coli ETS can pump up to 8H+ for each NADH molecule, and up to 6H+ for each FADH2 molecule.

Page 23: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

23

Page 24: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

24

A Bacterial ETS for Aerobic NADH Oxidation

Figure 14.14

Page 25: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

25

Page 26: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

26

The ATP synthase is a highly conserved protein complex, made of two parts:

The ATP Synthase

- Fo: Embedded in the membrane

- Pumps protons

- F1: Protrudes in the cytoplasm

- Generates ATP

Page 27: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

27

H+ Flux Drives ATP Synthesis: Oxidative Phophorylation

Page 28: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

28

Anaerobic Respiration

Page 29: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

29

Oxidized forms of nitrogen- Nitrate is successively reduced as follows:

NO3– → NO2

– → NO → 1/2 N2O → 1/2 N2

nitrite nitric oxide

nitrous oxide

- In general, any given species can carry out onlyone or two transformations in the series.

Oxidized forms of sulfur- Sulfate is successively reduced by many bacteria as follows:

SO42– → SO3

2– → 1/2 S2O32– → S0 → H2S

sulfite thiosulfate sulfur hydrogen sulfide

nitrate nitrogen gas

sulfate

Page 30: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

30

Anaerobic environments, such as the bottom of a lake, offer a series of different electron acceptors.- As each successive TEA is used up, its reduced form appears; the next best electron acceptor is then used, generally by a different microbe species.

Page 31: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

31

Lithotrophy:Oxidation of inorganic

compounds

Page 32: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

32

Lithotrophy is the acquisition of energy by oxidation of inorganic electron donors.

A kind of lithotrophy of great importance in the environment is nitrogen oxidation.

Lithotrophy

NH4+ → NH2OH → HNO2 → HNO3

ammonium hydroxylamine nitrous acid(nitrite)

nitric acid(nitrate)

1/2 O2 O2 1/2 O2

Surprisingly, ammonium can also yield energy under anaerobic conditions through oxidation by nitrite produced from nitrate respiration.

Page 33: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

33

Sulfur and metal oxidation

Lithotrophy

H2S → S0 → 1/2 S2O32– → H2SO4

hydrogensulfide

elementalsulfur

thiosulfate sulfuric acid

1/2 O2 1/2 O2 O2 + H2O

Microbial sulfur oxidation can cause severe environmental acidification, eroding structures.

- Problem is compounded by iron presence.

- Ferroplasma oxidizes ferrous sulfide:

FeS2 + 14Fe3+ + 8H2O → 15Fe2+ + 2SO42– + 16H+

Page 34: 1 Introduction Microbes transfer energy by moving electrons. - Electrons move from substrate molecules onto energy carriers, then onto membrane protein

34

Sulfuric Acid Production: Science and Science Fiction

Figure 14.21