we are still alone!

1
Published: February 18, 2011 r2011 American Chemical Society 117 dx.doi.org/10.1021/cb200023y | ACS Chem. Biol. 2011, 6, 117117 EDITORS LETTER pubs.acs.org/acschemicalbiology We Are Still Alone! T he discovery of extraterrestrial life is considered to be one of the holy grailsof science. There are occasional reports of signsof extraterrestrial life, but even after billions of dollars have been spent in space exploration and scientic research, no concrete evidence has been found. Many people believe that it might be only a matter of time before we discover life beyond our planet. The Drake equation, which estimates the number of detectable communicative extraterrestrial civilizations present in the Milky Way, predicts that a large number of such life- sustaining planetsexist within our galaxy. 1 Reports varying from the discovery of new Earth-likeplanets, to the detection of methane gas on Mars, to arsenic-bacteriaon Earth have fueled the imagination of both the scientic and popular presses. A recent report on the discovery of the most-Earthlikeexoplanet, Gliese 581 g, led to the sale of four hectare plots on this planet on the popular Internet auction site, eBay. Yet, the planet in question may not truly exist. 2 The discovery of methane on Mars by independent groups has also fueled the interest of alien life form enthusiasts. 3 Since most atmospheric methane on Earth is derived from living organisms and in particular methanogenic microorganisms, excitement stems from speculation that Mars may have some subsurface biological activity. An alternative and less sensationalized expla- nation is that the presence of geologic activity resulted in the release of methane from methane-ice clathrates, similar to those found in the deep ocean of our own planet. On Earth, scientists have also focused on isolating microorganisms that use alternative energy sources and unusual metabolism to provide clues to what possible alien life forms might implement to survive seemingly inhospitable environments. Studies characterizing microorganisms isolated from ice cores of the subglacial Lake Vostok in Antarctica are an example of this line of research. Interest in alternative metabolism under harshconditions also drives research on unusual metabolism in hydrothermal vents. The energy-yielding metabolism involving the production of methane from hydrogen and carbon dioxide is sucient to produce biomass. Microorganisms that utilize the energy derived from the oxidation of hydrogen sulde or ammonia have also been widely studied. These microorganisms form the bottom of the food chain at these hydrothermal vents that supports higher life forms such as tubeworms, clams, shrimp, etc. These drastically dierent environments may provide analogous environments to those predicted to exist on the Mars or on the Jovian moon, Europa. Recently, Wolfe-Simon et al. reported the isolation of an arsenic-bacteriafrom Mono Lake in California. 4 Living things primarily contain six elements: carbon, nitrogen, hydrogen, oxygen, sulfur, and phosphorus. Hence, the study claiming the presence of a microorganism that substitutes the key element phosphorus for arsenic heralded the possibility that yet unknown life forms were waiting to be discovered on this planet that might aid in a broader search for life elsewhere. Two simultaneous peer- reviewed manuscripts on the challenges that bacteria would face if it were to exchange out phosphorus for arsenic have now been published. In the current issue of ACS Chemical Biology, Fekry et al. (DOI: 10.1021/cb2000023) highlight the kinetic challenges encountered in exchanging arsenic in place of phosphorus in DNA. In another perspective in Biochemistry, Dan Tawk (DOI: 10.1021/bi200002a) reviews the implications of replacing phos- phorus with arsenic in phosphorus-containing enzymes. 5,6 We invite you to peruse through these manuscripts. Ultimately, even if future studies prove that the arsenic- bacteriadoes in fact completely swap phosphorus for arsenic, it does not translate to isolating an alien life form. It simply means that we have to expand the paradigm when looking for extra- terrestrial life. Jitesh Soares Managing Editor ACS Chemical Biology REFERENCES (1) SETI Institute. Drake Equation. http://www.seti.org/drakee- quation (accessed 01/18/10). (2) Courtland, R. First life-friendly exoplanet may not exist. New Scientist. http://www.newscientist.com/article/dn19586-rst-lifefriendly-exoplanet- may-not-exist.html (accessed 01/18/10). (3) Ball, P. (2004) Methane found on Mars. Nat. News DOI:10.1038/ news040329-5. (4) Wolfe-Simon, f., Switzer Blum, J. S., Kulp, T. R., Gordon, G. W., Hoeft, S. E., Pett-Ridge, J., Stolz, J. F., Webb, S. M. Weber, P. K. Davies, P. C. W., Anbar, A. D. Oremland, R. S. (2010) A bacterium that can grow by using arsenic instead of phosphorus. Science DOI:10.1126/science.1197258. (5) Fekry, M. I., Tipton, P. A., Gates, K. S. (2011) Kinetic con- sequences of replacing the internucleotide phosphorus atoms in DNA with arsenic. ACS Chem. Biol., DOI: 10.1021/cb2000023 (6) Tawk, D. S., Viola, R. E. (2011) Arsenate replacing phosphate- alternative life chemistries and ion promiscuity. Biochemistry DOI: 10.1021/bi200002a.

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Page 1: We Are Still Alone!

Published: February 18, 2011

r 2011 American Chemical Society 117 dx.doi.org/10.1021/cb200023y |ACS Chem. Biol. 2011, 6, 117–117

EDITORS LETTER

pubs.acs.org/acschemicalbiology

We Are Still Alone!

The discovery of extraterrestrial life is considered to be one ofthe “holy grails” of science. There are occasional reports of

“signs” of extraterrestrial life, but even after billions of dollarshave been spent in space exploration and scientific research, noconcrete evidence has been found. Many people believe that itmight be only a matter of time before we discover life beyond ourplanet. The Drake equation, which estimates the number ofdetectable communicative extraterrestrial civilizations present inthe Milky Way, predicts that a large number of such life-sustaining “planets” exist within our galaxy.1 Reports varyingfrom the discovery of new “Earth-like” planets, to the detection ofmethane gas on Mars, to “arsenic-bacteria” on Earth have fueledthe imagination of both the scientific and popular presses. Arecent report on the discovery of the “most-Earthlike” exoplanet,Gliese 581 g, led to the sale of four hectare plots on this planet onthe popular Internet auction site, eBay. Yet, the planet inquestion may not truly exist.2

The discovery of methane onMars by independent groups hasalso fueled the interest of alien life form enthusiasts.3 Since mostatmospheric methane on Earth is derived from living organismsand in particular methanogenic microorganisms, excitementstems from speculation that Mars may have some subsurfacebiological activity. An alternative and less sensationalized expla-nation is that the presence of geologic activity resulted in therelease of methane from methane-ice clathrates, similar to thosefound in the deep ocean of our own planet.OnEarth, scientists have also focused on isolatingmicroorganisms

that use alternative energy sources and unusual metabolism toprovide clues to what possible alien life forms might implement tosurvive seemingly inhospitable environments. Studies characterizingmicroorganisms isolated from ice cores of the subglacial Lake Vostokin Antarctica are an example of this line of research.Interest in alternative metabolism under “harsh” conditions

also drives research on unusual metabolism in hydrothermalvents. The energy-yielding metabolism involving the productionof methane from hydrogen and carbon dioxide is sufficient toproduce biomass. Microorganisms that utilize the energy derivedfrom the oxidation of hydrogen sulfide or ammonia have alsobeen widely studied. These microorganisms form the bottom ofthe food chain at these hydrothermal vents that supports higherlife forms such as tubeworms, clams, shrimp, etc. These drasticallydifferent environments may provide analogous environments tothose predicted to exist on the Mars or on the Jovian moon,Europa.Recently, Wolfe-Simon et al. reported the isolation of an

“arsenic-bacteria” from Mono Lake in California.4 Living thingsprimarily contain six elements: carbon, nitrogen, hydrogen,oxygen, sulfur, and phosphorus. Hence, the study claiming thepresence of a microorganism that substitutes the key elementphosphorus for arsenic heralded the possibility that yet unknownlife forms were waiting to be discovered on this planet that mightaid in a broader search for life elsewhere. Two simultaneous peer-reviewed manuscripts on the challenges that bacteria would faceif it were to exchange out phosphorus for arsenic have now been

published. In the current issue of ACS Chemical Biology, Fekryet al. (DOI: 10.1021/cb2000023) highlight the kinetic challengesencountered in exchanging arsenic in place of phosphorus inDNA. In another perspective in Biochemistry, Dan Tawfik (DOI:10.1021/bi200002a) reviews the implications of replacing phos-phorus with arsenic in phosphorus-containing enzymes.5,6 Weinvite you to peruse through these manuscripts.Ultimately, even if future studies prove that the “arsenic-

bacteria” does in fact completely swap phosphorus for arsenic,it does not translate to isolating an alien life form. It simplymeansthat we have to expand the paradigm when looking for extra-terrestrial life.

Jitesh SoaresManaging Editor

ACS Chemical Biology

’REFERENCES

(1) SETI Institute. Drake Equation. http://www.seti.org/drakee-quation (accessed 01/18/10).

(2) Courtland, R. First life-friendly exoplanetmaynot exist.NewScientist.http://www.newscientist.com/article/dn19586-first-lifefriendly-exoplanet-may-not-exist.html (accessed 01/18/10).

(3) Ball, P. (2004) Methane found on Mars. Nat. News DOI:10.1038/news040329-5.

(4) Wolfe-Simon, f., Switzer Blum, J. S., Kulp, T. R., Gordon, G. W.,Hoeft, S. E., Pett-Ridge, J., Stolz, J. F., Webb, S. M. Weber, P. K. Davies,P. C.W., Anbar, A. D. Oremland, R. S. (2010) A bacterium that can grow byusing arsenic instead of phosphorus. ScienceDOI:10.1126/science.1197258.

(5) Fekry, M. I., Tipton, P. A., Gates, K. S. (2011) Kinetic con-sequences of replacing the internucleotide phosphorus atoms in DNAwith arsenic. ACS Chem. Biol., DOI: 10.1021/cb2000023

(6) Tawfik, D. S., Viola, R. E. (2011) Arsenate replacing phosphate-alternative life chemistries and ion promiscuity. Biochemistry DOI:10.1021/bi200002a.