Publications Linked to the CFAR P30 Funding Award

1. Amorosa VK, Luetkemeyer A, Kang M, Johnson VA, Umbleja T, Haas DW, Yesmin S, Bardin MC, Chung RT, Alston-Smith B, Tebas P, Peters MG. Addition of nitazoxanide to PEG-IFN and ribavirin to improve HCV treatment response in HIV-1 and HCV genotype 1 coinfected persons naive to HCV therapy: results of the ACTG A5269 trial. HIV clinical trials. 2013;14(6):274-83. Epub 2013/12/18. doi: 10.1310/hct1406-274. PubMed PMID: 24334180; PubMed Central PMCID: PMCPMC4113390.

2. Cropsey KL, Hendricks PS, Jardin B, Clark CB, Katiyar N, Willig J, Mugavero M, Raper JL, Saag M, Carpenter MJ. A pilot study of screening, brief intervention, and referral for treatment (SBIRT) in non-treatment seeking smokers with HIV. Addictive behaviors. 2013;38(10):2541-6. Epub 2013/06/22. doi: 10.1016/j.addbeh.2013.05.003. PubMed PMID: 23787030; PubMed Central PMCID: PMCPMC3725186.

3. Davenport TM, Guttman M, Guo W, Cleveland B, Kahn M, Hu SL, Lee KK. Isolate-specific differences in the conformational dynamics and antigenicity of HIV-1 gp120. Journal of virology. 2013;87(19):10855-73. Epub 2013/08/02. doi: 10.1128/jvi.01535-13. PubMed PMID: 23903848; PubMed Central PMCID: PMCPMC3807424.

4. Ding Y, Li J, Wu Q, Yang P, Luo B, Xie S, Druey KM, Zajac AJ, Hsu HC, Mountz JD. IL-17RA is essential for optimal localization of follicular Th cells in the germinal center light zone to promote autoantibody-producing B cells. Journal of immunology (Baltimore, Md : 1950). 2013;191(4):1614-24. Epub 2013/07/17. doi: 10.4049/jimmunol.1300479. PubMed PMID: 23858031; PubMed Central PMCID: PMCPMC3819396.

5. Dombrowski JC, Kitahata MM, Van Rompaey SE, Crane HM, Mugavero MJ, Eron JJ, Boswell SL, Rodriguez B, Mathews WC, Martin JN, Moore RD, Golden MR. High levels of antiretroviral use and viral suppression among persons in HIV care in the United States, 2010. Journal of acquired immune deficiency syndromes (1999). 2013;63(3):299-306. Epub 2013/04/11. doi: 10.1097/QAI.0b013e3182945bc7. PubMed PMID: 23572013; PubMed Central PMCID: PMCPMC3691075.

6. Franco RA, Saag MS. When to start antiretroviral therapy: as soon as possible. BMC medicine. 2013;11:147. Epub 2013/06/19. doi: 10.1186/1741-7015-11-147. PubMed PMID: 23767762; PubMed Central PMCID: PMCPMC3682940.

7. Gilby IC, Wilson ML, Pusey AE. Ecology rather than psychology explains co-occurrence of predation and border patrols in male chimpanzees. Animal behaviour. 2013;86(1):61-74. Epub 2013/07/01. doi: 10.1016/j.anbehav.2013.04.012. PubMed PMID: 25400286; PubMed Central PMCID: PMCPMC4231443.

8. Gopal S, Patel MR, Yanik EL, Cole SR, Achenbach CJ, Napravnik S, Burkholder GA, Reid EG, Rodriguez B, Deeks SG, Mayer KH, Moore RD, Kitahata MM, Richards KL, Eron JJ. Association of early HIV viremia with mortality after HIV-associated lymphoma. AIDS (London, England). 2013;27(15):2365-73. Epub 2013/06/06. doi: 10.1097/QAD.0b013e3283635232. PubMed PMID: 23736149; PubMed Central PMCID: PMCPMC3773290.

9. Guttman M, Lee KK. A functional interaction between gp41 and gp120 is observed for monomeric but not oligomeric, uncleaved HIV-1 Env gp140. Journal of virology. 2013;87(21):11462-75. Epub 2013/08/24. doi: 10.1128/jvi.01681-13. PubMed PMID: 23966389; PubMed Central PMCID: PMCPMC3807357.

10. Haddad L, Wall KM, Vwalika B, Khu NH, Brill I, Kilembe W, Stephenson R, Chomba E, Vwalika C, Tichacek A, Allen S. Contraceptive discontinuation and switching among couples receiving integrated HIV and family planning services in Lusaka, Zambia. AIDS (London, England). 2013;27 Suppl 1:S93-103. Epub 2013/10/23. doi: 10.1097/qad.0000000000000039. PubMed PMID: 24088689; PubMed Central PMCID: PMCPMC4070372.

11. Hanna DB, Buchacz K, Gebo KA, Hessol NA, Horberg MA, Jacobson LP, Kirk GD, Kitahata MM, Korthuis PT, Moore RD, Napravnik S, Patel P, Silverberg MJ, Sterling TR, Willig JH, Collier A, Samji H, Thorne JE, Althoff KN, Martin JN, Rodriguez B, Stuart EA, Gange SJ. Association between U.S. state AIDS Drug Assistance Program (ADAP) features and HIV antiretroviral therapy initiation, 2001-2009. PloS one. 2013;8(11):e78952. Epub 2013/11/22. doi: 10.1371/journal.pone.0078952. PubMed PMID: 24260137; PubMed Central PMCID: PMCPMC3832515.

12. Hatano H, Jain V, Hunt PW, Lee TH, Sinclair E, Do TD, Hoh R, Martin JN, McCune JM, Hecht F, Busch MP, Deeks SG. Cell-based measures of viral persistence are associated with immune activation and programmed cell death protein 1 (PD-1)-expressing CD4+ T cells. The Journal of infectious diseases. 2013;208(1):50-6. Epub 2012/10/24. doi: 10.1093/infdis/jis630. PubMed PMID: 23089590; PubMed Central PMCID: PMCPMC3666131.

13. Hwang YG, Hsu HC, Lim FC, Wu Q, Yang P, Fisher G, Hunter GR, Mountz JD. Increased vitamin D is associated with decline of naive, but accumulation of effector, CD8 T cells during early aging. Advances in aging research. 2013;2(2):72-80. Epub 2013/05/01. doi: 10.4236/aar.2013.22010. PubMed PMID: 25392765; PubMed Central PMCID: PMCPMC4226219.

14. Jardine J, Julien JP, Menis S, Ota T, Kalyuzhniy O, McGuire A, Sok D, Huang PS, MacPherson S, Jones M, Nieusma T, Mathison J, Baker D, Ward AB, Burton DR, Stamatatos L, Nemazee D, Wilson IA, Schief WR. Rational HIV immunogen design to target specific germline B cell receptors. Science (New York, NY). 2013;340(6133):711-6. Epub 2013/03/30. doi: 10.1126/science.1234150. PubMed PMID: 23539181; PubMed Central PMCID: PMCPMC3689846.

15. Li H, Wu Q, Li J, Yang P, Zhu Z, Luo B, Hsu HC, Mountz JD. Cutting Edge: defective follicular exclusion of apoptotic antigens due to marginal zone macrophage defects in autoimmune BXD2 mice. Journal of immunology (Baltimore, Md : 1950). 2013;190(9):4465-9. Epub 2013/04/02. doi: 10.4049/jimmunol.1300041. PubMed PMID: 23543760; PubMed Central PMCID: PMCPMC3656168.

16. Li J, Yang P, Wu Q, Li H, Ding Y, Hsu HC, Spalding DM, Mountz JD. Death receptor 5-targeted depletion of interleukin-23-producing macrophages, Th17, and Th1/17 associated with defective tyrosine phosphatase in mice and patients with rheumatoid arthritis. Arthritis and rheumatism. 2013;65(10):2594-605. Epub 2013/07/03. doi: 10.1002/art.38057. PubMed PMID: 23818173; PubMed Central PMCID: PMCPMC3993980.

17. Liu P, Yates NL, Shen X, Bonsignori M, Moody MA, Liao HX, Fong Y, Alam SM, Overman RG, Denny T, Ferrari G, Ochsenbauer C, Kappes JC, Polonis VR, Pitisuttithum P, Kaewkungwal J, Nitayaphan S, Rerks-Ngarm S, Montefiori DC, Gilbert P, Michael NL, Kim JH, Haynes BF, Tomaras GD. Infectious virion capture by HIV-1 gp120-specific IgG from RV144 vaccinees. Journal of virology. 2013;87(14):7828-36. Epub 2013/05/10. doi: 10.1128/jvi.02737-12. PubMed PMID: 23658446; PubMed Central PMCID: PMCPMC3700223.

18. Liu WM, Huang P, Kar N, Burgett M, Muller-Greven G, Nowacki AS, Distelhorst CW, Lathia JD, Rich JN, Kappes JC, Gladson CL. Lyn facilitates glioblastoma cell survival under conditions of nutrient deprivation by promoting autophagy. PloS one. 2013;8(8):e70804. Epub 2013/08/13. doi: 10.1371/journal.pone.0070804. PubMed PMID: 23936469; PubMed Central PMCID: PMCPMC3732228.

19. Lucas GM, Jing Y, Sulkowski M, Abraham AG, Estrella MM, Atta MG, Fine DM, Klein MB, Silverberg MJ, Gill MJ, Moore RD, Gebo KA, Sterling TR, Butt AA. Hepatitis C viremia and the risk of chronic kidney disease in HIV-infected individuals. The Journal of infectious diseases. 2013;208(8):1240-9. Epub 2013/08/02. doi: 10.1093/infdis/jit373.

PubMed PMID: 23904290; PubMed Central PMCID: PMCPMC3778973.20. McLinden RJ, Labranche CC, Chenine AL, Polonis VR, Eller MA, Wieczorek L,

Ochsenbauer C, Kappes JC, Perfetto S, Montefiori DC, Michael NL, Kim JH. Detection of HIV-1 neutralizing antibodies in a human CD4(+)/CXCR4(+)/CCR5(+) T-lymphoblastoid cell assay system. PloS one. 2013;8(11):e77756. Epub 2013/12/07. doi: 10.1371/journal.pone.0077756. PubMed PMID: 24312168; PubMed Central PMCID: PMCPMC3842913.

21. Merino AM, Sabbaj S, Easlick J, Goepfert P, Kaslow RA, Tang J. Dimorphic HLA-B signal peptides differentially influence HLA-E- and natural killer cell-mediated cytolysis of HIV-1-infected target cells. Clinical and experimental immunology. 2013;174(3):414-23. Epub 2013/08/21. doi: 10.1111/cei.12187. PubMed PMID: 23952339; PubMed Central PMCID: PMCPMC3826307.

22. Overton ET, Kitch D, Benson CA, Hunt PW, Stein JH, Smurzynski M, Ribaudo HJ, Tebas P. Effect of statin therapy in reducing the risk of serious non-AIDS-defining events and nonaccidental death. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2013;56(10):1471-9. Epub 2013/02/07. doi: 10.1093/cid/cit053. PubMed PMID: 23386631; PubMed Central PMCID: PMCPMC3693493.

23. Raposo RA, Abdel-Mohsen M, Holditch SJ, Kuebler PJ, Cheng RG, Eriksson EM, Liao W, Pillai SK, Nixon DF. Increased expression of intrinsic antiviral genes in HLA-B*57-positive individuals. Journal of leukocyte biology. 2013;94(5):1051-9. Epub 2013/08/10. doi: 10.1189/jlb.0313150. PubMed PMID: 23929683; PubMed Central PMCID: PMCPMC3800066.

24. Reddy CL, Yosef N, Ubogu EE. VEGF-A165 potently induces human blood-nerve barrier endothelial cell proliferation, angiogenesis, and wound healing in vitro. Cellular and molecular neurobiology. 2013;33(6):789-801. Epub 2013/05/29. doi: 10.1007/s10571-013-9946-3. PubMed PMID: 23712256; PubMed Central PMCID: PMCPMC3723762.

25. Rich JD, DiClemente R, Levy J, Lyda K, Ruiz MS, Rosen DL, Dumont D. Correctional facilities as partners in reducing HIV disparities. Journal of acquired immune deficiency syndromes (1999). 2013;63 Suppl 1:S49-53. Epub 2013/07/03. doi: 10.1097/QAI.0b013e318292fe4c. PubMed PMID: 23673887; PubMed Central PMCID: PMCPMC3701159.

26. Samji H, Cescon A, Hogg RS, Modur SP, Althoff KN, Buchacz K, Burchell AN, Cohen M, Gebo KA, Gill MJ, Justice A, Kirk G, Klein MB, Korthuis PT, Martin J, Napravnik S, Rourke SB, Sterling TR, Silverberg MJ, Deeks S, Jacobson LP, Bosch RJ, Kitahata MM, Goedert JJ, Moore R, Gange SJ. Closing the gap: increases in life expectancy among treated HIV-positive individuals in the United States and Canada. PloS one. 2013;8(12):e81355. Epub 2013/12/25. doi: 10.1371/journal.pone.0081355. PubMed PMID: 24367482; PubMed Central PMCID: PMCPMC3867319.

27. Seay K, Qi X, Zheng JH, Zhang C, Chen K, Dutta M, Deneroff K, Ochsenbauer C, Kappes JC, Littman DR, Goldstein H. Mice transgenic for CD4-specific human CD4, CCR5 and cyclin T1 expression: a new model for investigating HIV-1 transmission and treatment efficacy. PloS one. 2013;8(5):e63537. Epub 2013/05/22. doi: 10.1371/journal.pone.0063537. PubMed PMID: 23691059; PubMed Central PMCID: PMCPMC3655194.

28. Speer A, Rowland JL, Haeili M, Niederweis M, Wolschendorf F. Porins increase copper susceptibility of Mycobacterium tuberculosis. Journal of bacteriology. 2013;195(22):5133-40. Epub 2013/09/10. doi: 10.1128/jb.00763-13. PubMed PMID: 24013632; PubMed Central PMCID: PMCPMC3811576.

29. Sudenga SL, Wiener HW, Shendre A, Wilson CM, Tang J, Shrestha S. Variants in interleukin family of cytokines genes influence clearance of high risk HPV in HIV-1

coinfected African-American adolescents. Human immunology. 2013;74(12):1696-700. Epub 2013/08/27. doi: 10.1016/j.humimm.2013.08.010. PubMed PMID: 23973891; PubMed Central PMCID: PMCPMC3842375.

30. Thacker RW, Hill AL, Hill MS, Redmond NE, Collins AG, Morrow CC, Spicer L, Carmack CA, Zappe ME, Pohlmann D, Hall C, Diaz MC, Bangalore PV. Nearly complete 28S rRNA gene sequences confirm new hypotheses of sponge evolution. Integrative and comparative biology. 2013;53(3):373-87. Epub 2013/06/12. doi: 10.1093/icb/ict071. PubMed PMID: 23748742; PubMed Central PMCID: PMCPMC3744897.

31. Ubogu EE. The molecular and biophysical characterization of the human blood-nerve barrier: current concepts. Journal of vascular research. 2013;50(4):289-303. Epub 2013/07/11. doi: 10.1159/000353293. PubMed PMID: 23839247; PubMed Central PMCID: PMCPMC4030640.

32. Wall KM, Vwalika B, Haddad L, Khu NH, Vwalika C, Kilembe W, Chomba E, Stephenson R, Kleinbaum D, Nizam A, Brill I, Tichacek A, Allen S. Impact of long-term contraceptive promotion on incident pregnancy: a randomized controlled trial among HIV-positive couples in Lusaka, Zambia. Journal of acquired immune deficiency syndromes (1999). 2013;63(1):86-95. Epub 2012/12/04. doi: 10.1097/QAI.0b013e31827ee19c. PubMed PMID: 23202814; PubMed Central PMCID: PMCPMC3625483.

33. Wang JH, New JS, Xie S, Yang P, Wu Q, Li J, Luo B, Ding Y, Druey KM, Hsu HC, Mountz JD. Extension of the germinal center stage of B cell development promotes autoantibodies in BXD2 mice. Arthritis and rheumatism. 2013;65(10):2703-12. Epub 2013/07/03. doi: 10.1002/art.38059. PubMed PMID: 23818250; PubMed Central PMCID: PMCPMC3979745.

34. Zhang S, Blount AC, McNicholas CM, Skinner DF, Chestnut M, Kappes JC, Sorscher EJ, Woodworth BA. Resveratrol enhances airway surface liquid depth in sinonasal epithelium by increasing cystic fibrosis transmembrane conductance regulator open probability. PloS one. 2013;8(11):e81589. Epub 2013/11/28. doi: 10.1371/journal.pone.0081589. PubMed PMID: 24282612; PubMed Central PMCID: PMCPMC3839872.

35. Althoff KN, Rebeiro P, Brooks JT, Buchacz K, Gebo K, Martin J, Hogg R, Thorne JE, Klein M, Gill MJ, Sterling TR, Yehia B, Silverberg MJ, Crane H, Justice AC, Gange SJ, Moore R, Kitahata MM, Horberg MA. Disparities in the quality of HIV care when using US Department of Health and Human Services indicators. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2014;58(8):1185-9. Epub 2014/01/28. doi: 10.1093/cid/ciu044. PubMed PMID: 24463281; PubMed Central PMCID: PMCPMC3967825.

36. Atasheva S, Frolova EI, Frolov I. Interferon-stimulated poly(ADP-Ribose) polymerases are potent inhibitors of cellular translation and virus replication. Journal of virology. 2014;88(4):2116-30. Epub 2013/12/18. doi: 10.1128/jvi.03443-13. PubMed PMID: 24335297; PubMed Central PMCID: PMCPMC3911523.

37. Avila D, Althoff KN, Mugglin C, Wools-Kaloustian K, Koller M, Dabis F, Nash D, Gsponer T, Sungkanuparph S, McGowan C, May M, Cooper D, Chimbetete C, Wolff M, Collier A, McManus H, Davies MA, Costagliola D, Crabtree-Ramirez B, Chaiwarith R, Cescon A, Cornell M, Diero L, Phanuphak P, Sawadogo A, Ehmer J, Eholie SP, Li PC, Fox MP, Gandhi NR, Gonzalez E, Lee CK, Hoffmann CJ, Kambugu A, Keiser O, Ditangco R, Prozesky H, Lampe F, Kumarasamy N, Kitahata M, Lugina E, Lyamuya R, Vonthanak S, Fink V, d'Arminio Monforte A, Luz PM, Chen YM, Minga A, Casabona J, Mwango A, Choi JY, Newell ML, Bukusi EA, Ngonyani K, Merati TP, Otieno J, Bosco MB, Phiri S, Ng OT, Anastos K, Rockstroh J, Santos I, Oka S, Somi G, Stephan C, Teira R, Wabwire D, Wandeler G, Boulle A, Reiss P, Wood R, Chi BH, Williams C, Sterne JA, Egger M. Immunodeficiency at the start of combination antiretroviral therapy in low-, middle-, and

high-income countries. Journal of acquired immune deficiency syndromes (1999). 2014;65(1):e8-16. Epub 2014/01/15. doi: 10.1097/QAI.0b013e3182a39979. PubMed PMID: 24419071; PubMed Central PMCID: PMCPMC3894575.

38. Bateman AC, Parham GP, Sahasrabuddhe VV, Mwanahamuntu MH, Kapambwe S, Katundu K, Nkole T, Mulundika J, Pfaendler KS, Hicks ML, Shibemba A, Vermund SH, Stringer JS, Chibwesha CJ. Clinical performance of digital cervicography and cytology for cervical cancer screening in HIV-infected women in Lusaka, Zambia. Journal of acquired immune deficiency syndromes (1999). 2014;67(2):212-5. Epub 2014/07/01. doi: 10.1097/qai.0000000000000270. PubMed PMID: 24977474; PubMed Central PMCID: PMCPMC4162769.

39. Battalora LA, Young B, Overton ET. Bones, Fractures, Antiretroviral Therapy and HIV. Current infectious disease reports. 2014;16(2):393. Epub 2014/02/19. doi: 10.1007/s11908-014-0393-1. PubMed PMID: 24535243; PubMed Central PMCID: PMCPMC4240510.

40. Beachler DC, Abraham AG, Silverberg MJ, Jing Y, Fakhry C, Gill MJ, Dubrow R, Kitahata MM, Klein MB, Burchell AN, Korthuis PT, Moore RD, D'Souza G. Incidence and risk factors of HPV-related and HPV-unrelated Head and Neck Squamous Cell Carcinoma in HIV-infected individuals. Oral oncology. 2014;50(12):1169-76. Epub 2014/10/11. doi: 10.1016/j.oraloncology.2014.09.011. PubMed PMID: 25301563; PubMed Central PMCID: PMCPMC4253676.

41. Boulle A, Schomaker M, May MT, Hogg RS, Shepherd BE, Monge S, Keiser O, Lampe FC, Giddy J, Ndirangu J, Garone D, Fox M, Ingle SM, Reiss P, Dabis F, Costagliola D, Castagna A, Ehren K, Campbell C, Gill MJ, Saag M, Justice AC, Guest J, Crane HM, Egger M, Sterne JA. Mortality in patients with HIV-1 infection starting antiretroviral therapy in South Africa, Europe, or North America: a collaborative analysis of prospective studies. PLoS medicine. 2014;11(9):e1001718. Epub 2014/09/10. doi: 10.1371/journal.pmed.1001718. PubMed PMID: 25203931; PubMed Central PMCID: PMCPMC4159124.

42. Bowers NL, Helton ES, Huijbregts RP, Goepfert PA, Heath SL, Hel Z. Immune suppression by neutrophils in HIV-1 infection: role of PD-L1/PD-1 pathway. PLoS pathogens. 2014;10(3):e1003993. Epub 2014/03/15. doi: 10.1371/journal.ppat.1003993. PubMed PMID: 24626392; PubMed Central PMCID: PMCPMC3953441.

43. Brawner KM, Morrow CD, Smith PD. Gastric microbiome and gastric cancer. Cancer journal (Sudbury, Mass). 2014;20(3):211-6. Epub 2014/05/24. doi: 10.1097/ppo.0000000000000043. PubMed PMID: 24855010; PubMed Central PMCID: PMCPMC4149312.

44. Cochran JN, Diggs PV, Nebane NM, Rasmussen L, White EL, Bostwick R, Maddry JA, Suto MJ, Roberson ED. AlphaScreen HTS and live-cell bioluminescence resonance energy transfer (BRET) assays for identification of Tau-Fyn SH3 interaction inhibitors for Alzheimer disease. Journal of biomolecular screening. 2014;19(10):1338-49. Epub 2014/08/27. doi: 10.1177/1087057114547232. PubMed PMID: 25156556; PubMed Central PMCID: PMCPMC4318572.

45. Ding Y, Li J, Yang P, Luo B, Wu Q, Zajac AJ, Wildner O, Hsu HC, Mountz JD. Interleukin-21 promotes germinal center reaction by skewing the follicular regulatory T cell to follicular helper T cell balance in autoimmune BXD2 mice. Arthritis & rheumatology (Hoboken, NJ). 2014;66(9):2601-12. Epub 2014/06/10. doi: 10.1002/art.38735. PubMed PMID: 24909430; PubMed Central PMCID: PMCPMC4146687.

46. Duda SN, Farr AM, Lindegren ML, Blevins M, Wester CW, Wools-Kaloustian K, Ekouevi DK, Egger M, Hemingway-Foday J, Cooper DA, Moore RD, McGowan CC, Nash D. Characteristics and comprehensiveness of adult HIV care and treatment programmes in

Asia-Pacific, sub-Saharan Africa and the Americas: results of a site assessment conducted by the International epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration. Journal of the International AIDS Society. 2014;17:19045. Epub 2014/12/18. doi: 10.7448/ias.17.1.19045. PubMed PMID: 25516092; PubMed Central PMCID: PMCPMC4268491.

47. Duverger A, Wolschendorf F, Anderson JC, Wagner F, Bosque A, Shishido T, Jones J, Planelles V, Willey C, Cron RQ, Kutsch O. Kinase control of latent HIV-1 infection: PIM-1 kinase as a major contributor to HIV-1 reactivation. Journal of virology. 2014;88(1):364-76. Epub 2013/10/25. doi: 10.1128/jvi.02682-13. PubMed PMID: 24155393; PubMed Central PMCID: PMCPMC3911731.

48. Evans DH, Fox MP, Maskew M, McNamara L, MacPhail P, Mathews C, Sanne I. CD4 criteria improves the sensitivity of a clinical algorithm developed to identify viral failure in HIV-positive patients on antiretroviral therapy. Journal of the International AIDS Society. 2014;17:19139. Epub 2014/09/18. doi: 10.7448/ias.17.1.19139. PubMed PMID: 25227265; PubMed Central PMCID: PMCPMC4165719.

49. Gopal S, Patel MR, Achenbach CJ, Yanik EL, Cole SR, Napravnik S, Burkholder GA, Mathews WC, Rodriguez B, Deeks SG, Mayer KH, Moore RD, Kitahata MM, Richards KL, Eron JJ. Lymphoma immune reconstitution inflammatory syndrome in the center for AIDS research network of integrated clinical systems cohort. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2014;59(2):279-86. Epub 2014/04/24. doi: 10.1093/cid/ciu270. PubMed PMID: 24755860; PubMed Central PMCID: PMCPMC4102912.

50. Guttman M, Garcia NK, Cupo A, Matsui T, Julien JP, Sanders RW, Wilson IA, Moore JP, Lee KK. CD4-induced activation in a soluble HIV-1 Env trimer. Structure (London, England : 1993). 2014;22(7):974-84. Epub 2014/06/17. doi: 10.1016/j.str.2014.05.001. PubMed PMID: 24931470; PubMed Central PMCID: PMCPMC4231881.

51. Heredia A, Davis C, Amin MN, Le NM, Wainberg MA, Oliveira M, Deeks SG, Wang LX, Redfield RR. Targeting host nucleotide biosynthesis with resveratrol inhibits emtricitabine-resistant HIV-1. AIDS (London, England). 2014;28(3):317-23. Epub 2013/12/12. doi: 10.1097/qad.0000000000000168. PubMed PMID: 24326355; PubMed Central PMCID: PMCPMC4469130.

52. Honasoge A, Shelton KA, Sontheimer H. Autocrine regulation of glioma cell proliferation via pHe-sensitive K(+) channels. American journal of physiology Cell physiology. 2014;306(5):C493-505. Epub 2014/01/02. doi: 10.1152/ajpcell.00097.2013. PubMed PMID: 24380845; PubMed Central PMCID: PMCPMC4042621.

53. Howe CJ, Cole SR, Napravnik S, Kaufman JS, Adimora AA, Elston B, Eron JJ, Jr., Mugavero MJ. The role of at-risk alcohol/drug use and treatment in appointment attendance and virologic suppression among HIV(+) African Americans. AIDS research and human retroviruses. 2014;30(3):233-40. Epub 2013/12/12. doi: 10.1089/aid.2013.0163. PubMed PMID: 24325326; PubMed Central PMCID: PMCPMC3938941.

54. Huijbregts RP, Michel KG, Hel Z. Effect of progestins on immunity: medroxyprogesterone but not norethisterone or levonorgestrel suppresses the function of T cells and pDCs. Contraception. 2014;90(2):123-9. Epub 2014/03/29. doi: 10.1016/j.contraception.2014.02.006. PubMed PMID: 24674041.

55. Ingle SM, May MT, Gill MJ, Mugavero MJ, Lewden C, Abgrall S, Fatkenheuer G, Reiss P, Saag MS, Manzardo C, Grabar S, Bruyand M, Moore D, Mocroft A, Sterling TR, D'Arminio Monforte A, Hernando V, Teira R, Guest J, Cavassini M, Crane HM, Sterne JA. Impact of risk factors for specific causes of death in the first and subsequent years of antiretroviral therapy among HIV-infected patients. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2014;59(2):287-97.

Epub 2014/04/29. doi: 10.1093/cid/ciu261. PubMed PMID: 24771333; PubMed Central PMCID: PMCPMC4073781.

56. Kumar R, Eipers P, Little RB, Crowley M, Crossman DK, Lefkowitz EJ, Morrow CD. Getting started with microbiome analysis: sample acquisition to bioinformatics. Current protocols in human genetics / editorial board, Jonathan L Haines [et al]. 2014;82:18 8 1- 8 29. Epub 2014/07/22. doi: 10.1002/0471142905.hg1808s82. PubMed PMID: 25042718; PubMed Central PMCID: PMCPMC4383038.

57. Li H, Hsu HC, Wu Q, Yang P, Li J, Luo B, Oukka M, Steele CH, 3rd, Cua DJ, Grizzle WE, Mountz JD. IL-23 promotes TCR-mediated negative selection of thymocytes through the upregulation of IL-23 receptor and RORgammat. Nature communications. 2014;5:4259. Epub 2014/07/09. doi: 10.1038/ncomms5259. PubMed PMID: 25001511; PubMed Central PMCID: PMCPMC4136447.

58. Li J, Hsu HC, Ding Y, Li H, Wu Q, Yang P, Luo B, Rowse AL, Spalding DM, Bridges SL, Jr., Mountz JD. Inhibition of fucosylation reshapes inflammatory macrophages and suppresses type II collagen-induced arthritis. Arthritis & rheumatology (Hoboken, NJ). 2014;66(9):2368-79. Epub 2014/05/20. doi: 10.1002/art.38711. PubMed PMID: 24838610; PubMed Central PMCID: PMCPMC4146698.

59. Liu Y, Holdbrooks AT, De Sarno P, Rowse AL, Yanagisawa LL, McFarland BC, Harrington LE, Raman C, Sabbaj S, Benveniste EN, Qin H. Therapeutic efficacy of suppressing the Jak/STAT pathway in multiple models of experimental autoimmune encephalomyelitis. Journal of immunology (Baltimore, Md : 1950). 2014;192(1):59-72. Epub 2013/12/11. doi: 10.4049/jimmunol.1301513. PubMed PMID: 24323580; PubMed Central PMCID: PMCPMC3934829.

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