uk nmr users’ meeting 2016 matteo pennestri › fileadmin › user_upload › 5-events ›...
TRANSCRIPT
Innovation with Integrity
UK NMR Users’ Meeting 2016
Matteo Pennestri
Tips & Tricks around temperature
Temperature in NMR
• NMR experiments are sensitive to small changes (of less than 10mK)
• even small deviations of the sample temperature have an impact on the quality of the NMR spectra (line broadening and shifting of the NMR lines)
• Precise, stable and reliable regulation required
• Stability of the experiment temperature subject of different influences Change of the ambient temperature Sample heating cause by RF pulses (heating of the coils) Convection flow inside the sample (10mm samples) Evaporation and condensation of the sample liquid
December 5, 2016
Temperature Regulation
• Temperatur sensor not inside the sample – offset of the sample temperature (CryoProbe
around 2K for RT range) CryoProbes: • Direct flow
• Excellent thermal insulation
• Higher VT gas flow required compared to RT
December 5, 2016
CryoProbes: Temperature range
2 different temperature ranges for CryoProbes:
Probe Type Target Temperature
Standard -40°C…+ 80°C
Elevated Temperature (ET)
0°C…+ 135°C
Probe Type Target Temperature
Requested Flow [l/h]
1.7mm 0°C…+ 80°C 400
5mm -40°C…+ 80°C 0°C… + 135°C
670-800
10mm
0°C… + 135°C
670-800
December 5, 2016
Spinners
• Standard (-40°C…+80°C) Elevated (0°C… +135°C)
POM: 0- 80°C KEL-F: 0- 120°C Ceramic: down to -80°C up to 135°C
December 5, 2016
SmartVT: Intelligent VT gas flow management
December 5, 2016
Ultra stable VT electronics
Temperature sensor within +/-15mK
5 4 bar 4 3 bar 3 2 bar 2 1 bar
SmartVT: Bruker ‘self tune’
Features • Small overshoot (~1-2K, Bio samples) • Automatic heater power evaluation
December 5, 2016
Cooler technology
• Better probe interface • Different cooling power modes • TopSpin 3.0 integrated operation Benefits
• Best cooling with new Probes • Lower NMR sample temperatures
Good to know
• Compatible with all VTU and probes • Maintenance free
December 5, 2016
SmartCooler: 2nd Generation NMR cooler (BCU I/II)
SmartCooler (BCU): New cooler technology
Johnston type plug
• No icing • No leakage • Adapters available for other probes
Operational Modes
• “Remote” BCU controlled by the TopSpin 3.0 • “Flush/0” Purge BCU and probe
No cooling power • “1” Min. cooling power (RT temperatures) • “2” Max. cooling power (Low temperatures)
December 5, 2016
SmartCooler and SmartVT: Improved sample temperature stability
December 5, 2016
100mM Sucrose / 5mm TCI700 spin-echo difference (HMQC without gradients, non-decoupled, refocused)
x64
SmartVT SmartCooler
More than 2x better
Temperature artifact in 2D experiments
• TOCSY (sucrose sample)
Not enough dummy scans
December 5, 2016
4.084.104.124.144.164.184.204.084.104.124.144.164.184.20
Standard NMR Thermometer
NMR Thermometer Maintaining the sample temperature
Spectra of 10 mM raffinose in D2O with ~50 mM NaAc-d3
experiment start
time
H2O: ~ 0.01ppm / K @600MHz = 6Hz / K
December 5, 2016
DigiLockTM SmartVT TopSpin3.2
NMR Thermometer - Introduced in 2012 Hardware and software
AVANCE III HD
December 5, 2016
NMR Thermometer Temperature measurement inside
Probe sensor (outside)
T
Temperature sensor
Inside the sample
T
Add thermometer substance (temperature sensitive)
December 5, 2016
Compounds (typical concentrations 10 – 50 mM)
How to choose the right substance?
C4D9OD 1.2 ppm
December 5, 2016
edlock: T_* - solvents
• monitored temperatures: target = green sample internal = yellow
HCCH-TOCSY experiment 50ms spinlock duration recycle delay = 1 sec sample: protein in DHPC, acqueous solution
NMR ThermometerTM for bio-NMR deuterated micelles Sample heating due to CC-spinlock
December 5, 2016
Limits of the NMR thermometer - substance (concentration) requirements
∆
Intensity ratio
• Shift difference ∆ between field and frequency lock • Signal ratio field and frequency lock signal
December 5, 2016
Limits
• S/N (2H): about 200:1 to obtain reliably lock-in performance compare S/N(2H) 1% D2O on TCI-CP600 > 1000:1 (0.2% considered to be the lower limit) • Depending on the shift difference and the signal intensity ratio of the
lock signals
Rule of thumb: Shift difference 3ppm -> ~1.5ppm
-> approx. 2x concentration of the NMR thermometer substance necessary
December 5, 2016
Application fields
Main applications:
• NMR experiments with heating (RF, rotation) • Keep temperature, small temperature range, not important absolute
temperature
Other applications: • Same temperature between different systems
• Bigger temperature range, absolute (exact relative) temperature
• Measurements of temperature dependent parameters (kinetics, thermodynamics) • exact (absolute) temperature
December 5, 2016
NOESY-HSQC, TOCSY-HSQC, CPMG-HSQC TCI CryoProbe 800MHz
NMR thermometer OFF ON
0.5mM 13C/15N labeled ubiquitin/ 50mM Naac-d3 in H2O/D2O 95/5% December 5, 2016
Temperature Correction Flow change 550 to 500l/h
December 5, 2016
NMR Thermometer off NMR Thermometer on time
• MeOD (99.8%), pseudo 2D
Long time temperature stability
0.9mK
tem
pera
ture
[K]
time [h] time [h]
NMR thermometer OFF ON
NMR Therm. Probe Sensor 1.1mK T-stab.:
50mM Naac in H2O/D2O 95/5% at 600MHz AVIIIHD TCI-CP
297.95
297.96
297.97
297.98
297.99
298
298.01
298.02
298.03
298.04
298.05
0 2 4 6 8 10297.95
297.96
297.97
297.98
297.99
298
298.01
298.02
298.03
298.04
298.05
0 2 4 6 8 10
December 5, 2016
Flowbar available in TS3.5 (since pl4)
• The flowbar uses the AU- program nmr_therm
December 5, 2016
SampleJet
• Holds 5 racks with each 96 tubes • Standard 96 well format
compatible with common automation robots
• Tube diameter automatically recognized
• Outer ring up to 99 tubes (3 spinner positions)
• No spinner needed
5. Dezember 2016
Can we store our samples refrigerated ?
SampleJet with cooling option
5. Dezember 2016
NEW
• Storage of cold and warm samples at
the same time. Racks can be temperature regulated individually.
• Outer ring for 99 tubes (5mm) at room temperature
• Extended firmware for faster automation.
Speed up automation
• Samples at 6ºC - Measurements are at 37ºC
• Preheating station (at 37ºC)
• Extended firmware temperature regulation «on hold» during sample change
5. Dezember 2016
T
min
~1- 1.5min
~1K
SampleCase
5. Dezember 2016
• Very popular with open access routine labs
• Cost-effective and robust sample changer
• 24 sample positions
• Convenient and safe sample access at user height
• Random access for sequential and batch mode automation
• Almost all samples in tubes (1mm – 10mm ∅, up to 9’’ length)
• IconNMR & TopSpin control
• Compatible with CyroFit and MAS
Temperature relevant samples SampleCase Cooled
• Keeps NMR samples refrigerated
(6ºC +/- 2ºC) before and after experiments
• temperature range 4 – 40ºC • Requires 2nd BCU-I or equivalent
cooling unit
• TopSpin implementation
5. Dezember 2016
Temperature relevant samples Polymer applications
• Mix and heat up to 120-130ºC in heat block for several hours (overnight) to dissolve the polymer
• Homogenize sample (stick, heat gun)
• NMR experiments at 120-130ºC
5. Dezember 2016
New: SampleCase Heated
• Up to 24 individual heated sample
positions (number of positions selectable)
• Temperature setting controlled via TopSpin software (range: max. 125ºC +/- 5ºC)
• Proven heating control technology
• Supports all common sample-tubes in spinners suitable for high temperature operation
5. Dezember 2016
Comparison of heated and not heated
5. Dezember 2016
~2.5-3min
~ 1.5min
Holder not heated Holder heated
5min MeOD sample at 313K pseudo 2D
NMR thermometer using Naac (S/N-performance)
Monitoring Experiment (SL, CPD)
400MHz BBFO
600MHz BBFO
600MHz TXI
600MHz QCI
850MHz TCI
<1mK
1-3mK >200mM 50-100mM 50mM
1-2mK
3-6mK
200-500mM
<200mM 100mM 20mM
<20mM
2-4mK
6-12mK
100-200mM
<100mM 50mM 10mM <10mM
4-8mK 12-30mK 50-100mM <50mM 20mM
>8mK
>30mK <50mM
December 5, 2016