two gpcrcase studies with the ip-one euand tb assay kits · two gpcrcase studies with the ip-one...
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![Page 1: Two GPCRCase Studies with the IP-One Euand Tb Assay Kits · Two GPCRCase Studies with the IP-One Euand Tb Assay Kits A Positive Modulator and an Inverse Agonist Project Martin Graf,](https://reader036.vdocuments.us/reader036/viewer/2022062603/5f0bb0bb7e708231d431bd90/html5/thumbnails/1.jpg)
Two GPCR Case Studies with the IP-One Eu and Tb Assay KitsA Positive Modulator and an Inverse Agonist Project
Martin Graf, F. Hoffmann-La Roche
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2SBS 2008, CisBio Tutorial
Nutley
Palo AltoBasel
Penzberg
The Pharma Research Sites of Roche
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3SBS 2008, CisBio Tutorial
Dyslipidemia VascularDiseases
Obesity
Diabetes
Discovery Research at Roche BaselVascular & Metabolic Diseases
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4SBS 2008, CisBio Tutorial
Discovery Research at Roche BaselNeurosciences
Bipolar DisorderAlzheimer‘sDisease
Depression
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5SBS 2008, CisBio Tutorial
IP-One Assay Principle
cell lysis
anti-IP1
agonist
Gq
IP3
membraneGPCRGPCR
IP1
d2
PLCPIP2
IP2
IP1
myo-Inositolinhibition by LiCl
Ca2+IP1
Accumulated IP1displaces IP1-d2,
reduction of FRET signal
Eu3+
337 nm
665 nm
FRET
620 nm
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6SBS 2008, CisBio Tutorial
IP1 standard curve & agonist dose response
10000*620
665
nm
nm
RFU
RFURatio =Calculations: 100*(%)
neg
negsample
Ratio
RatioRatioDeltaF
−=
Compound [nM]
ratio
IP1 standard curve EC50 = 320 nM
Compound [nM]
IP1[nM]
agonist
agonist
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7SBS 2008, CisBio Tutorial
GPCR1 - Positive Modulator Project
GPCR2 - Inverse Agonist Project
First Results with the Terbium Kit
Summary and Conclusion
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8SBS 2008, CisBio Tutorial
Screening Cascade – GPCR1
Positive Modulator Project
Primary Screening
Hit Confirmation / Selectivity
Hit Validation
Intracellular Ca 2+ Measurement
(FLIPR)
IP-One Assay
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9SBS 2008, CisBio Tutorial
Agonist Shift Assay
GPCR1 - Positive Modulator Project
-20
0
20
40
60
80
100
120
140
0.01 0.10 1.00 10.00 100.00
[Agonist, uM]
PC
T_C
TR
L
Agonist alone
Agonist + 10µµµµM Compound
Agonist Shift = pEC50Agonist – pEC50Agonist+Compound
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10SBS 2008, CisBio Tutorial
0.01 0.1 1 10 100
20
60
100
140
180
220
260
300
340
Significance of the Agonist-Shift
0
2
4
6
8
10
12
14
-0.30 -0.25 -0.20 -0.15 -0.10 -0.05 0.00 0.05 0.10 0.15 0.20 0.25 0.30 0.35
shift
#
σ=0.12
shifts larger than 2σ = 0.24 are significant
Overlay of 9 Agonist Dose Response Curves
IP1[nM]
Agonist [nM]
Histogram of the shifts
IP-One: pEC50Ago = 8.22 +/- 0.09 (n=9)
FLIPR: pEC50Ago = 8.66 +/- 0.13 (n= 320) (FLIPR 2σ = 0.37)
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11SBS 2008, CisBio Tutorial
Agonist Shift Results of Some Hits
Agonist alone
Agonist + 10µM Compound 1Agonist + 30µM Compound 1
pEC50Agonist = 8.33
Shift at 10µµµµM = -0.15
Shift at 30µµµµM = -0.35**
Comparison:
Agonist Shifts FLIPR vs. IP-One
-0.32-0.40Cmpd 3
+0.34-0.39Cmpd 2
-0.15-0.36Cmpd 1
Shift IPone
Shift FLIPR@ 10uM
Agonist [nM]
IP1[nM]
Validation in 2nd assay is important
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12SBS 2008, CisBio Tutorial
GPCR1 - Positive Modulator Project
GPCR2 - Inverse Agonist Project
First Results with the Terbium Kit
Summary and Conclusion
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13SBS 2008, CisBio Tutorial
Screening Cascade – GPCR2
Inverse Agonist Project
Primary Screening
Hit Confirmation
Hit Validation
Fluorescence Polarization
Binding Assay
IP-One Assay to discriminate:- Agonists- Antagonists- Inverse Agonists
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14SBS 2008, CisBio Tutorial
Optimization of Agonist and inverse Agonist Mode (1)
Compound [nM]
ratio
Compound [nM]
IP1[nM]
Agonist
Agonist
Inverse Agonist
IP1 standard curve
Inverse Agonist
Conditions: 7’500 cells/well, 2h incubation
constitutive activity
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15SBS 2008, CisBio Tutorial
Optimization of Agonist and inverse Agonist Mode (2)
Compound [nM]IP1[nM]
Compound [nM]
IP1[nM]
Best Condition for Agonist Mode: 7’500 cells/well, 1h incubation
Best Condition for inverse Agonist Mode: 7’500 cells/well, 4h incubation
Agonist:EC50 = 10 nM
Agonist:
EC50 = 8.5 nM
Inverse Agonist:EC50 = 105nM
Inverse Agonist:EC50 = 146nM
Cell Number and Incubation time Optimization
in order to cover dynamic range of the standard curve
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16SBS 2008, CisBio Tutorial
Agonist (nM)0.001 0.1 10 1000
IP-O
ne
(nM
)
0
200
400
600
800
1000
1200
1400
1600
1800
2000
2200
Comparison of an Antagonist and an Inverse Agonist
Agonist Dose Response+ Antagonist+ inverse Agonist
Inverse Agonist (nM)0.001 0.1 10 1000
IP-O
ne
(nM
)
0
200
400
600
800
1000
1200
1400
1600
1800
2000
2200
Antagonist (nM)0.001 0.1 10 1000
IP-O
ne
(nM
)
0
200
400
600
800
1000
1200
1400
1600
1800
2000
2200
EC80 agonist + Antagonist
Antagonist only
EC80 agonist + inverse Agonist
inverse Agonist only
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17SBS 2008, CisBio Tutorial
GPCR1 - Positive Modulator Project
GPCR2 - Inverse Agonist Project
First Results with the Terbium Kit
Summary and Conclusion
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18SBS 2008, CisBio Tutorial
0
5000
10000
15000
20000
25000
30000
35000
40000
45000
50000
290 300 310 320 330 340 350 360 370 380 390
Wavelength (nm)
Mo
l. E
xtin
c. C
oef
. (M
-1.c
m-1
)
Europium Cryptate Lumi4-Tb Cryptate LanthaScreen Terbium Chelate
Terbium Cryptate
Europium Cryptate
Excitation Spectrum Europium and Terbium
YAG-Laser (355nm)
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19SBS 2008, CisBio Tutorial
plate::explorer system and plate::vision reader
• Co-development Carl Zeiss Jena and F. Hoffmann-La Roche • Support and Maintenance now by Perkin Elmer
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20SBS 2008, CisBio Tutorial
Tb and Eu - different platesStandard curves measured on plate::vision reader
IP1 [nM]
Delta F %
Terbium:EC50IP1 = 83 nM
Europium:EC50IP1 = 160 nM
Tb vs Eu on plate::vision Tb in different plates on plate::vision
IP1 [nM]Delta F %
Corning black clear bottom (3712): EC50IP1 = 83 nM
Corning white clear bottom (3707): EC50IP1 = 97 nM
Greiner white clear bottom (780098): EC50IP1 = 98 nM
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21SBS 2008, CisBio Tutorial
Different Readers
plate::vision (PerkinElmer) EC50IP1 = 83 nM
NanoScan (IOM) EC50IP1 = 130nM
EnVision (PerkinElmer) EC50IP1 = 96 nM
Tb standard curves in different readers
IP1 [nM]
Delta F %
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22SBS 2008, CisBio Tutorial
Cellular Assay with Terbium Assay Kit GPCR2 – inverse agonist project – comparison with Eu
Compound [nM]IP1[nM]
7’500 cells/well, 4h incubation,Plate: 384 white Greiner 781080,
Discovery reader
Agonist:
EC50 = 8.5 nM
Inverse Agonist:EC50 = 105nM
Terbium Kit Europium Kit
7’500 cells/well, 4h incubation,Plate: 384 black Corning 3712,
Plate::vision reader
Agonist:
EC50 = 6.9 nM
Inverse Agonist:EC50 = 101nM
Optimized inverse agonist conditions
Compound [nM]
IP1[nM]
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23SBS 2008, CisBio Tutorial
Summary - Conclusion
Cisbio IP-One Kit
� simple to use and robust
� cell concentration / incubation time needs to be optimized
� GPCR 1: Highly reproducible assay is crucial for optimization of positive modulator
� GPCR 2: Profiling and mode of action: agonist, antagonist, inverse agonist
Terbium Reagents
� Spectral properties fit very well with plate::vision reader
� 2-4 times more sensitive than Eu-assay
� enables us to use IP-One in primary screening
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24SBS 2008, CisBio Tutorial
Acknowledgments
Hoffmann-La Roche, Basel
• Michel Dietz
• Thilo Enderle
• Doris Roth
• Ramona Schäfer
• Veronique Schirmer
Cisbio
• Stéphane Martinez
• Jean-Luc Tardieu
• Eric Trinquet
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25SBS 2008, CisBio Tutorial
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