towards synthetic 3d dynamic cardiac imaging isabelle e. magnin creatis-lrmn
DESCRIPTION
Towards synthetic 3D dynamic cardiac Imaging Isabelle E. Magnin CREATIS-LRMN CNRS UMR 5220, Inserm U 630, Université Lyon 1, Insa-Lyon http://creatis.insa-lyon.fr. CREATIS - LRMN Medical Imaging Center – Lyon http://creatis.insa-lyon.fr. LRMN. 180 people (65 Ph D students). - PowerPoint PPT PresentationTRANSCRIPT
Towards synthetic 3D dynamic cardiac Imaging
Isabelle E. Magnin
CREATIS-LRMNCNRS UMR 5220, Inserm U 630, Université Lyon 1, Insa-Lyon
http://creatis.insa-lyon.fr
CREATIS - LRMNCREATIS - LRMNMedical Imaging Center – LyonMedical Imaging Center – Lyon
http://creatis.insa-lyon.fr
180 people (65 Ph D students)180 people (65 Ph D students)
Doua Campus
Est Hospital
ESRF, Grenoble
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Complex Anatomy
short axisLong-axis
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Magnetic Resonance Imaging
(MRI)
1,5 T Siemens Vision
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Multimodal cardiac imaging MRI
Anatomie
Siemens, Sonata
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Heart anatomical surfaces and volumes
3D SPECT, XRaysor MRI
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3D multimodal cardiac images
Creatis & INRIA
3D deformable finite elements
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Deformable elastic template for 3D segmentation (Quoc Cuong Pham, PhD thesis Creatis, INPG, 2002)
Initial templateNodes : 5197, Elements : 22368
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LV+RV
Mapping functional data onto a surfacic model
Medial surface computation
LV Medial surface
10
Medial surface
Endocardial surface
Epicardial surface
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PET imaging Siemens ECAT 931
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Multimodal cardiac imaging
Metabolism
FDG PET emission-image
PET transmissionimage
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Surface-based registration of thorax structures
deformable pyramid approach [Lötjönen et al.,1999]
Rigid PET-MR image registration method
MRI transaxial
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PET transmission
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3D functional cartographies PET (Glucosis uptake)
Patient 1
Patient 2
max 0 max0
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Recording Electro-magnetic activity Magneto-cardiography
MCG data (10 patients)
-BioMag laboratory (Helsinki University Central Hospital, HUCH) - 99-channel MCG device (Neuromag, Helsinki, Finland)
15
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Cartography of the electromagnetic activity (MCG)
2D conventional
New 3D Model
[Mäkela et al. 2003]LRMN
3-D Functional cardiac maps
Quantitative perfusion computed from 3-D FDG Positron Emission Tomography (PET)
(coll. Cermep, Lyon) 17
L VElectromagnetic field
computed from Magnetocardiography
(coll. Helsinki LBME)
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Physiology modelingPhysiology modeling
• modeling organs anatomy, dynamics and modeling organs anatomy, dynamics and physiology physiology
• complex elastic and moving structurescomplex elastic and moving structures• electrophysiological modelselectrophysiological models• bio-mechanical model (FEM)bio-mechanical model (FEM)• Biological, cellular modelsBiological, cellular models
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A new fully-digital anthropomorphic and A new fully-digital anthropomorphic and dynamic thorax/heart modeldynamic thorax/heart model
R. Haddad, I.E. Magnin, and P. ClarysseR. Haddad, I.E. Magnin, and P. ClarysseAugust 2007August 2007
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Outline
Motivations and objectivesMotivations and objectives Difficulties Difficulties Thorax/ Heart model construction Thorax/ Heart model construction Multimodality virtual imaging of the heart Multimodality virtual imaging of the heart Conclusions and Perspectives Conclusions and Perspectives
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Evaluation of cardiac/thoracic image analysis algorithms• Segmentation and motion tracking of cardiac/thoracic structures
• Multimodal Image Registration
• Thorax and heart image reconstruction in dynamic tomography
Motivations Motivations
See:
Schaerer et al., Automatic segmentation in MRI sequences,
EMBC 2007, SaP1B4.5
Need for a reference
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:
Synthetic Imaging Synthetic Imaging
Simulated realistic sequencesMRI, TEP, CT, US..
In vivo imaging acquisitions
A Virtual reference breathing thorax - beating heart model
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Building the breathing thorax / Beating heart model:
1. MRI Reference image data acquisitions
2. Anatomic 3D static models (thorax & heart)
3. Models animation
Breathing thorax/ Beating heart model
4. Models synchronization
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3. Models animation Displacement fields fitting :
Successive multi-levels non rigid FFD registrations
Deformation of the 3D model
Delhay, PhD thesis 2006
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2D displays of 3D estimated displacement fields (slice at medium level)2D displays of 3D estimated displacement fields (slice at medium level)
mid-systole end-diastole early-diastole
Magnitude mm
0,00
6,00
1,50
3,00
4,50
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Evolution of the LV and LA volumes during the CCEvolution of the LV and LA volumes during the CC
22204 14126 1082 2816 18 2624
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Dynamic combined Thorax/Heart model
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