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The E3 Ubiquitin Ligase GREUL1 Anteriorizes Ectoderm during Xenopus Development Annette G. M. Borchers,* Andrew L. Hufton,* Adam G. Eldridge,Peter K. Jackson,Richard M. Harland,and Julie C. Baker* ,1 *Department of Genetics, and Department of Pathology and Program in Cancer Biology, Stanford University, Stanford, California 94305; and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720 We have identified a family of RING finger proteins that are orthologous to Drosophila Goliath (G1, Gol). One of the members, GREUL1 (Goliath Related E3 Ubiquitin Ligase 1), can convert Xenopus ectoderm into XAG-1- and Otx2-expressing cells in the absence of both neural tissue and muscle. This activity, combined with the finding that XGREUL1 is expressed within the cement gland, suggests a role for GREUL1 in the generation of anterior ectoderm. Although GREUL1 is not a direct inducer of neural tissue, it can activate the formation of ectopic neural cells within the epidermis of intact embryos. This suggests that GREUL1 can sensitize ectoderm to neuralizing signals. In this paper, we provide evidence that GREUL1 is an E3 ubiquitin ligase. Using a biochemical assay, we show that GREUL1 catalyzes the addition of polyubiquitin chains. These events are mediated by the RING domain since a mutation in two of the cysteines abolishes ligase activity. Mutation of these cysteines also compromises GREUL1’s ability to induce cement gland. Thus, GREUL1’s RING domain is necessary for both the ubiquitination of substrates and for the conversion of ectoderm to an anterior fate. © 2002 Elsevier Science (USA) Key Words: E3 ubiquitin ligase; C3H2C3 RING finger; Goliath family; cement gland; placode; lateral line; extraembryonic. INTRODUCTION Signals from the dorsal mesoderm pattern the overlying ectoderm during Xenopus gastrulation, giving rise to the central nervous system and a non-neural structure called the cement gland. These structures are organized along an anterior–posterior axis whereby the cement gland is the most anterior ectodermal structure, followed by the fore- brain, hindbrain, and spinal cord, respectively. Nieuwkoop developed the “activation and transformation” model to explain the resulting pattern of the dorsal ectoderm (Nieuw- koop, 1952). This theory proposed that the dorsal ectoderm is initially “activated” to form anterior structures (cement gland and forebrain). The anterior fates are then “trans- formed” into more posterior fates (hindbrain and spinal cord) by caudalizing agents. In recent years, headway has been made in understanding the molecules involved in “activation and transformation.” It is now accepted that the initial “activation” of anterior neural tissue is due to the suppression of BMP4 signaling (Harland and Gerhart, 1997; Harland, 2000). Molecules that antagonize BMP4 either extracellularly, like noggin or chor- din, (Piccolo et al., 1996; Zimmerman et al., 1996; Fainsod et al., 1997; Hsu et al., 1998) or intracellularly, for example Otx2 (Blitz and Cho, 1995; Gammill and Sive, 2000), can directly induce anterior neural fates. Furthermore, dose- response experiments have demonstrated that specific lev- els of BMP4 are essential for patterning within the initial anterior ectoderm. Low doses of BMP4 activate neural development, intermediate doses induce cement gland, and high doses generate epidermis (Knecht et al., 1995; Wilson et al., 1997). These findings suggest that diffusion of BMP antagonists from the dorsal mesoderm creates a gradient of BMP4 signaling along the anterior ectoderm that subse- quently generates distinct anterior tissue types. A few transcription factors, including Xotx5b, Xotx2, and XPitx1, can act locally to induce cement gland formation (Blitz and Cho, 1995; Chang et al., 2001; Vignali et al., 2000). While Otx5b and XPitx1 induce cement gland in the absence of neural tissue, Otx2 can convert ectoderm to neural tissue or cement gland in a dose-dependent manner. 1 To whom correspondence should be addressed. Fax: 01 (650) 725 1534. E-mail: [email protected]. Developmental Biology 251, 395– 408 (2002) doi:10.1006/dbio.2002.0814 0012-1606/02 $35.00 © 2002 Elsevier Science (USA) All rights reserved. 395

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  • Developmental Biology 251, 395–408 (2002)doi:10.1006/dbio.2002.0814

    The E3 Ubiquitin Ligase GREUL1 AnteriorizesEctoderm during Xenopus Development

    Annette G. M. Borchers,* Andrew L. Hufton,* Adam G. Eldridge,†Peter K. Jackson,† Richard M. Harland,‡ and Julie C. Baker* ,1

    *Department of Genetics, and †Department of Pathology and Program in Cancer Biology,Stanford University, Stanford, California 94305; and ‡Department of Molecular andCell Biology, University of California, Berkeley, California 94720

    We have identified a family of RING finger proteins that are orthologous to Drosophila Goliath (G1, Gol). One of the members,GREUL1 (Goliath Related E3 Ubiquitin Ligase 1), can convert Xenopus ectoderm into XAG-1- and Otx2-expressing cells in theabsence of both neural tissue and muscle. This activity, combined with the finding that XGREUL1 is expressed within thecement gland, suggests a role for GREUL1 in the generation of anterior ectoderm. Although GREUL1 is not a direct inducer ofneural tissue, it can activate the formation of ectopic neural cells within the epidermis of intact embryos. This suggests thatGREUL1 can sensitize ectoderm to neuralizing signals. In this paper, we provide evidence that GREUL1 is an E3 ubiquitin ligase.Using a biochemical assay, we show that GREUL1 catalyzes the addition of polyubiquitin chains. These events are mediated bythe RING domain since a mutation in two of the cysteines abolishes ligase activity. Mutation of these cysteines alsocompromises GREUL1’s ability to induce cement gland. Thus, GREUL1’s RING domain is necessary for both the ubiquitinationof substrates and for the conversion of ectoderm to an anterior fate. © 2002 Elsevier Science (USA)

    Key Words: E3 ubiquitin ligase; C3H2C3 RING finger; Goliath family; cement gland; placode; lateral line;extraembryonic.

    INTRODUCTION

    Signals from the dorsal mesoderm pattern the overlyingectoderm during Xenopus gastrulation, giving rise to thecentral nervous system and a non-neural structure calledthe cement gland. These structures are organized along ananterior–posterior axis whereby the cement gland is themost anterior ectodermal structure, followed by the fore-brain, hindbrain, and spinal cord, respectively. Nieuwkoopdeveloped the “activation and transformation” model toexplain the resulting pattern of the dorsal ectoderm (Nieuw-koop, 1952). This theory proposed that the dorsal ectoderm isinitially “activated” to form anterior structures (cementgland and forebrain). The anterior fates are then “trans-formed” into more posterior fates (hindbrain and spinalcord) by caudalizing agents.

    In recent years, headway has been made in understandingthe molecules involved in “activation and transformation.”It is now accepted that the initial “activation” of anterior

    1 To whom correspondence should be addressed. Fax: �01 (650)

    0012-1606/02 $35.00© 2002 Elsevier Science (USA)All rights reserved.

    neural tissue is due to the suppression of BMP4 signaling(Harland and Gerhart, 1997; Harland, 2000). Molecules thatantagonize BMP4 either extracellularly, like noggin or chor-din, (Piccolo et al., 1996; Zimmerman et al., 1996; Fainsodet al., 1997; Hsu et al., 1998) or intracellularly, for exampleOtx2 (Blitz and Cho, 1995; Gammill and Sive, 2000), candirectly induce anterior neural fates. Furthermore, dose-response experiments have demonstrated that specific lev-els of BMP4 are essential for patterning within the initialanterior ectoderm. Low doses of BMP4 activate neuraldevelopment, intermediate doses induce cement gland, andhigh doses generate epidermis (Knecht et al., 1995; Wilsonet al., 1997). These findings suggest that diffusion of BMPantagonists from the dorsal mesoderm creates a gradient ofBMP4 signaling along the anterior ectoderm that subse-quently generates distinct anterior tissue types.

    A few transcription factors, including Xotx5b, Xotx2, andXPitx1, can act locally to induce cement gland formation(Blitz and Cho, 1995; Chang et al., 2001; Vignali et al.,2000). While Otx5b and XPitx1 induce cement gland in theabsence of neural tissue, Otx2 can convert ectoderm to

    neural tissue or cement gland in a dose-dependent manner.

    725 1534. E-mail: [email protected].

    395

  • Gammill and Sive (2000) observed that Otx2, when com-bined with the appropriate levels of BMP4, can stimulatemore cement gland induction than Otx2 alone. This coop-erative effect suggests that the cement gland is formedalong the dorsal ectoderm where intermediate levels ofBMP4 juxtapose with Otx2.

    Clearly, dose regulation is critical for the patterning ofthe dorsal ectoderm. Control of these events requires sig-naling networks that include both positively and negativelyacting components. Mechanisms of negative regulation,

    although found in many signaling pathways, vary consider-ably, and can occur transcriptionally, posttranscriptionally,or posttranslationally. One mode of posttranslational regu-lation is ubiquitination, which is critical for many pro-cesses including cell cycle control and morphogenesis (Pe-ters, 1998; Maniatis, 1999). Ubiquitination involves thecooperation of three enzymes termed E1, E2, and E3, whichtogether assemble a polyubiquitin chain on a given proteinsubstrate. E3 ubiquitin ligases use protein–protein interac-tion domains to selectively bind and direct formation of a

    FIG. 1. GREUL1 converts epidermis into cement gland and neural tissue in whole embryos. Embryos were injected with 500 pg ofGREUL1 mRNA into one blastomere of two-cell Xenopus embryos. At late neurula stage (19–21), the embryos were stained by in situhybridization for tissue-specific markers. (A, B) Laterally viewed, XAG-1-stained embryos, injected (A) compared with uninjected (B). Theinset in (B) shows an anterior view of the same embryo. (C, D) Laterally viewed, Xotx2-stained embryos, injected (C) compared withuninjected (D). (E) Dorsally viewed, injected and Nrp1-stained embryos. The injected side, marked by an arrow, can be clearly distinguishedfrom the uninjected side. (F) Embryos injected at the one-cell stage with 500 pg of GREUL1 and stained for N-tubulin. (G) 500 pgGREUL1-injected embryos stained for c-actin, showing normal somite development. In (H), the embryos were also injected with lacZ andstained for �-galactosidase activity (red) prior to in situ hybridization for slug. Dashed lines separate control and GREUL1/lacZ-injectedsides. The control side is oriented toward the top. (I–L) One-cell-stage GREUL1-injected embryos stained by in situ hybridization for bothXAG-1 (magenta) and GREUL1 (blue–green). (I) was injected with 1 ng of GREUL1, and (J, K) were injected with 500 pg of GREUL1. (L) Anuninjected control. (M) An expanded view of a portion of the embryo in (K), showing a few ectopic XAG-1 dots that appear to be outsideof the blue–green GREUL1-expressing region.

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  • polyubiquitin chain to a given protein target (Peters, 1998;Weissman, 2001). This ubiquitinated substrate is then tar-geted for degradation by the 26S proteasome (Voges et al.,1999). Until recently, few E3 enzymes had been identified.With the emergence of identifiable motifs, however, thereare now several protein families shown to function as E3ubiquitin ligases (Freemont, 2000; Jackson et al., 2000;Joazeiro and Weissman, 2000; Tyers and Jorgensen, 2000).

    One E3 ubiquitin ligase family, which has recently beenfound to catalyze polyubiquitin chain formation, is theC3H2C3 RING fingers (Jackson et al., 2000; Joazeiro andWeissman, 2000). The first hint that RING fingers have ageneral role in ubiquitination, came from the discovery thatROC1 (also known as Rbx1or Hrt1) is an integral componentof the SCF (Skp1/Cul1/F-box protein) family of E3 ligases(Kamura et al., 1999; Ohta et al., 1999; Tan et al., 1999).Shortly thereafter, otherwise unrelated RING finger proteinswere shown to function as E3 ligases. Two of these proteins,Mdm2 and c-Cbl, were shown to recognize and ubiquitinatespecific target substrates, p53 and PDGFR, respectively(Joazeiro et al., 1999; Lorick et al., 1999; Fang et al., 2000).These studies demonstrated that RING-containing proteinscan act as key components of the ubiquitination machinery.

    In this paper, we explore the role of a new protein,GREUL1, in the patterning of the dorsal ectoderm.GREUL1 can convert ectoderm into Otx2- and XAG-1-expressing cells, indicating a role in rostralization of ecto-derm. Furthermore, we provide biochemical evidence thatGREUL1 functions as an E3 ubiquitin ligase and analyzewhether this ability to ubiquitinate proteins is necessary forin vivo function. The identification of GREUL1 has subse-quently led to the elucidation of a family of moleculesconsisting of five additional paralogs, all of which containthe C3H2C3 RING motif.

    MATERIALS AND METHODS

    Screening an e6.5 Mouse cDNA Library

    An e6.5 mouse cDNA library was arrayed on 384-well plates andsubsequently divided into 360 pools each containing 96 cDNAs.

    FIG. 2. GREUL1 induces XAG-1 and Xotx2 from naı̈ve ectoderm.A total of 1 ng, 500 pg, or 250 pg of GREUL1 was injected into the

    prospective ectoderm of a one-cell Xenopus embryo. The injectedectoderm and noninjected control ectoderm were explanted at theblastula stage and aged until stage 20. (A) The explants and a wholeembryo were then analyzed by RT-PCR for NCAM, Krox20,HoxB9, c-actin, and the loading control EF-1�. The RT� indicatesthe whole embryo processed without addition of reverse transcrip-tase. (B–K) Explants and uninjected whole embryos (B,G), werestained for Xotx2 (B–F) and XAG-1 (H–K), by in situ hybridization.For Xotx2 (B–F), the bottom of the figure shows the number ofexplants exhibiting patches of darkly staining cells/the total num-ber of explants analyzed. 1 ng and 500 pg were significantlydifferent from the control at P values of less than 0.05, using aWilliams corrected G-test for independence.

    397E3 Ubiquitin Ligase GREUL1

    © 2002 Elsevier Science (USA). All rights reserved.

  • Plasmid DNA was generated from these pools and digested withthe enzyme AscI to linearize the cDNA. The linearized pools werethen transcribed into mRNA by using SP6 mMessage mMACHINEkit (Ambion, Austin, TX). The pools were then injected into theprospective ectoderm of the 1-cell Xenopus embryo, which wereallowed to develop until late neurula stages (19–20). At this stage,the embryos were fixed using MEMFA (0.1 M Mops, 2 mM EGTA,1 mM MgSO4) and processed for in situ hybridization. The embryoswere hybridized simultaneously for the neural patterning markersOtx2 (Lamb et al., 1993), Krox20 (Bradley et al., 1993), En-2(Brivanlou and Harland, 1989), and HoxB9 (Sharpe et al., 1987),each at a concentration of 0.3 �g/ml. Embryos from each pool wereanalyzed for phenotypic effects on the patterning of the nervoussystem. Positive pools were then divided into rows and columns,and the assay was repeated with these subpools. The overlap inactivity between a row and column indicated the single positivecolony, which was sequenced (GenBank Accession No. AY112656).

    Sequence Analysis

    For alignment and phylogenic analysis, G1 family protein se-quences were translated from the most complete mRNA sequencesavailable for each paralog in GenBank: Mus musculus GREUL1,NM_023270; Homo sapiens GREUL1, NM_024539, BG991456,and AW583705; X. laevis XGREUL1, AW639484 and AY112655;M. musculus GREUL3, AK017027; H. sapiens GREUL3, BE044562;H. sapiens GREUL2, AW273800 and BE500941; M. musculusG1RP, NM_021540; H. sapiens G1RP, XM_003972, BI911723, andBG716688; Gallus gallus G1RP, AF397702; M. musculus GREUL4,AI462488 and AW987003; H. Sapiens GREUL4, BI600905,AL556941, BG891269, BI753416, and BG678827; H. sapiensGREUL5, AB033040, and BG203270; Drosophila melanogasterGoliath, M97204 and AY069169. Predicted Fugu rubripes proteinsJGI_2867, JGI_31265, and JGI_18068 were obtained from the FuguGenome Consortium. The N-terminal ends for incomplete humanproteins were predicted from genomic sequence using Genescan(http://genes.mit.edu/GENSCAN.html) for GREUL2 and GREUL3,and Grail (http://grail.lsd.ornl.gov/grailexp/) for GREUL1. All sixhuman paralogs mapped to unique positions in the genome, con-firming their identity as separate genes. Protein alignments werecreated by ClustalW and refined by hand. Signal peptides werepredicted with the neural net option of SignalP 2.0 (http://www.cbs.dtu.dk/services/SignalP-2.0/). Transmembrane domainswere predicted with TMHMM 2.0 (http://www.cbs.dtu.dk/services/TMHMM-2.0/). The Goliath family phylogeny was cre-ated by using maximum likelihood, implemented by SEMPHY.The best tree and its distances were calculated by using informa-tive sequence from the vertebrate proteins, and then D. melano-gaster Goliath was used to root the tree. Only regions of unam-biguous alignment were included in the calculations; gappedregions were excluded.

    Cloning the 5� End of XGREUL1

    Sequence for XGREUL1 was extended toward the 5� end byheminested PCR amplification from a Clontech Xenopus MATCH-MAKER cDNA library, using XGREUL1-specific primers and avector-specific primer. XGREUL1-specific primers were designedfrom the EST AW638484. Vector primer: 5�-AAGTGAACTTGCG-GGGTTTTTCAGTATCTACG-3�. First XGREUL1-specific primer:5�-AGGACCAAGTACCTTATCTCCTTGC-3�. Second nestedXGREUL1-specific primer: 5�-TTTTTGTTCTGAGCCCGTGTG-

    3�. Resulting XGREUL1 clones were sequenced and a consensussequence was created (GenBank Accession No. AY112655).

    Plasmid ConstructionpCS107 �C1C2 was generated by site-directed mutagenesis

    using QuikChange (Stratagene, La Jolla, CA). Primers used were:(U) 5�-CTGATGGAGATAGCGGTGCTGTGGGCATTGAGCTC-3� and (D) 5�-GAGCTCAATGCCCACAGCACCGCTATCTCC-ATCAG-3�. The GST fusion to the C terminus of GREUL1 (GSTC-term) was generated by PCR using the original pCS107 GREUL1 asa template. The following primers were used: (U) 5�-GTC-GCGGATCCGCTCGAAGATTACGAAATGCAAGAG-3�and (D)5�-GCGGAATTCTTAAGATTTAATCTCCCGAACAGCTGC-3�.The resulting PCR fragment was digested by using BamHI andEcoRI, and cloned in-frame into the respective sites of pGEX-6P-1(Amersham Pharmacia Biotech Inc, NY). This construction yieldeda GST fusion to the C terminus of GREUL1, which lacks thetransmembrane domain. The identical primers indicated abovewere used to generate GST�C1C2 from GSTC-term usingQuikChange (Stratagene).

    Injection of X. laevis EmbryosFemale adult Xenopus were ovulated by injection of human

    chorionic gonadotropin, and eggs were fertilized in vitro (Condieand Harland, 1987). After treatment with 3% cysteine (pH 8.0),embryos were reared in 1/3 MR. Capped mRNA was synthesizedby in vitro transcription of linearized plasmids using the SP6mMessage mMACHINE kit (Ambion). For microinjections, em-bryos were placed in 2.5% Ficoll in 1/3 MR and injected in theanimal pole of one-cell-stage or into one blastomere of two-cell-stage embryos. After culturing in 1/3 MR, embryos were staged(Nieuwkoop and Faber, 1975) and fixed in MEMFA for 1 h at roomtemperature. After fixation with MEMFA for 1 h, the embryos wereused for whole-mount in situ hybridization.

    Xenopus Animal Caps and TransplantsFor explant experiments, one-cell embryos were injected at the

    animal pole and cultured until stage 8–9 in 1/3 MR. Ectodermalexplants were cut at stage 8–9 in 3/4 NAM (Peng, 1991). The capswere either directly used for transplantation or cultured in NAMand harvested at stage 20. The expression pattern of the caps wasanalyzed by RT-PCR or whole-mount in situ hybridization. RT-PCR of animal caps and whole embryos was performed as described(Wilson and Melton, 1994). Primer sets used included: EF-1�,Krox-20, HoxB9, NCAM (Hemmati-Brivanlou and Melton, 1994),c-actin (Lamb and Harland, 1995; Wilson and Melton, 1994), andODC (Agius et al., 2000). For GREUL1, the following primers wereused: (U) 5�-CAGGTCACGATGGTGATAGAAGTTG, (D) 5�-AGGACCAAGTACCTTATCTCCTTGC-3�.

    Transplantation assays were performed as described (Borchers etal., 2000) with the following modifications: To lineage traceGREUL1-expressing cells in ectodermal explants, 350 pg lacZ RNAwas coinjected with GREUL1 mRNA. Visualization of the�-galactosidase protein was performed as described (Smith andHarland, 1991) with the modification that 6-chloro-3-indolyl-�-D-galactoside (Red-Gal, Research Organics, Inc., Cleveland, OH) wasused instead of X-Gal. For all other transplantations, embryos wereinjected with 500 pg GREUL1 mRNA and the grafting was per-formed as shown in Fig. 3. The transplanted embryos were furtheranalyzed by Nrp1 whole-mount in situ hybridization.

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  • Whole-Mount in Situ Hybridization

    Mouse whole-mount in situ hybridization used the protocol asdescribed (Belo et al., 1997). Xenopus whole-mount in situ hybrid-izations were performed as previously described (Harland, 1991).Antisense probes were generated from the following plasmids:c-actin (Hemmati-Brivanlou et al., 1990), Nrp1 (Knecht et al.,1995), N-tubulin (Good et al., 1989), slug (Mayor et al., 1995), Otx2(Lamb et al., 1993), and XAG-1 (Sive et al., 1989). XGREUL1 probewas generated by RT-PCR from stage 36–40 RNA, using thefollowing primers: 5�-AATGAATTCGAAGATCAATAGAGCTG-CCGAGAG-3� and 5�-TGAGGATCCAGGACCAAGTACCTTA-TCTCCTTGC-3�. XAG-1/GREUL1 double in situ hybridizationwas performed as described in Sive et al. (2000); embryos werehybridized simultaneously with digoxigenin–UTP-labeled XAG-1and fluorescein–UTP-labeled GREUL1. XAG-1 was developed withMagenta-Phos solution: 7 �l Magenta Phos stock (25 mg/ml inDMF) and 3.5 �l tetrazolium red stock (75 mg/ml in 70% DMF) perml of AP buffer. Alkaline phosphatase was inactivated by incuba-tion in MAB containing 10 mM EDTA for 10 min at 65°C followedby methanol dehydration. GREUL1 was then developed with BCIP(3.5 �l 50 mg/ml BCIP per ml AP buffer).

    Ubiquitin Assay

    Expression of GST fusion proteins (GSTC-term, GST�C1C2) inEscherichia coli BL21 and batch purification was performed byusing Glutathione Sepharose 4 Fast Flow (Amersham PharmaciaBiotech Inc.) as stated in the manual. The protein purification wascontrolled with Coomassie staining of PAGE gels and Westernblotting with GST antibody (sc-138; Santa Cruz Biotechnology,Santa Cruz, CA). Total protein from the GSTC-term purificationused in reactions include: 10, 30, and 100 ng. Total protein fromGST�C1C2 purification include: 10, 30, 100, 300, and 900 ng.Assay components were: human E1 (Calbiochem, San Diego, CA),human Ubc5c E2 (purified from pGEX-6P-1 Ubc5c, cleaved usingPreScission Protease; Amersham Pharmacia Biotech Inc.), Apc2/Apc11 (Apc2/11 his-tagged and purified from baculovirus), andhuman FLAG-ubiquitin (kind gift of Jianing Huang and RubyDaniel). The reaction volume consisted of: 2 ng E1, 70 ng E2, 30 ngApc2/Apc11 (or GST fusion protein at the respective concentra-tions), 32 ng FLAG-ubiquitin, and 2 mM ATP. The reactions werecarried out in 50 mM Tris (pH 7.5), 5 mM MgCl2, 0.6 mM DTT, for2 h at 30°C. The reaction was stopped with sample buffer, and theproteins were run on a 14% SDS–PAGE gel. Ubiquitination wasdetected by using FLAG antibody (Sigma, St. Louis, MO).

    RESULTS

    GREUL1 Is Identified in a Neural PatterningScreen

    To identify molecules that control cellular differentiationevents occurring during mouse gastrulation, we con-structed an e6.5 mouse cDNA library in an RNA expressionplasmid (Baker et al., 1999). We then screened mRNA poolsgenerated from this library for neural patterning or inducingactivities. Xenopus embryos overexpressing mRNA poolswere harvested at late neurula stages (19–20) and analyzedsimultaneously for a panel of neural patterning markers,including HoxB9 (spinal cord), Krox20 (rhombomeres 3 and

    5), Otx2 (forebrain), En-2 (midbrain), and XAG-1 (cementgland). This screen is a modification of previous expressioncloning approaches and is described in detail in Grammer etal. (2000) (also see Materials and Methods). One mRNApool caused Xenopus epidermis to accumulate neural cellsin a spotted pattern. From this pool, we identified a newmolecule that we have named GREUL1 for Goliath RelatedE3 Ubiquitin Ligase 1 (GenBank Accession No. AY112656).

    GREUL1 Causes the Formation of Ectopic AnteriorNeural Cells and Cement Gland within theEpidermis

    To verify that GREUL1 was responsible for the ectopicstaining observed in embryos from the screen, we injected500 pg of GREUL1 mRNA into the prospective ectoderm ofone blastomere of two-cell-stage Xenopus embryos. In situhybridization using several different markers demonstratesthat GREUL1 overexpression causes the ectopic formationof XAG-1 and Xotx2 expressed in a characteristic spottedpattern within the epidermis (Figs. 1A–1D). Cells express-ing HoxB9, En-2, or Krox20 were not evident (data notshown). Embryos overexpressing mouse GREUL1 also con-tain neural cells spread across the epidermis at late neurulastages (19–21), demonstrated by staining for both Nrp1(neural marker) and N-tubulin (neuronal marker) (Figs. 1Eand 1F). To determine whether neural crest cells were alsoaffected in GREUL1-injected embryos, we expressed bothGREUL1 and lacZ in one blastomere at the two-cell stage,and analyzed the embryos at stage 18 for the neural crestmarker slug. The neural crest was significantly reduced andscattered on the side of injection (Fig. 2H, arrows), suggest-ing that GREUL1 overexpression may affect both neuraland neural crest cell populations. However, while neuralcells are ectopically expressed, neural crest cell populationsare reduced and misplaced. As a control, we analyzed thec-actin expression of GREUL1-expressing embryos by insitu hybridization. Figure 1G shows that the GREUL1expression does not affect somitic development.

    Although we detect molecular changes during neurulastages, morphological differences are first seen at tadpolestages (30–35), when, regardless of whether GREUL1 isinjected as RNA or DNA, embryos show reduced tail andenlarged trunk structures and proctodeums. Additionally,microcephaly and reduced eye anlagen were seen in varyingseverities (scored as “posteriorized” in Table 1, according toKühl et al., 1996). Embryos exhibiting other abnormalshapes like contracted trunk regions were counted as “de-formed” embryos. The abnormal formation of trunk andtail is reminiscent of embryos overexpressing Xotx1, -2, or-5 (Andreazzoli et al., 1997; Vignali et al., 2000) andXB/U-Cadherin, where microcephaly is more frequent inthe latter. For XB/U-Cadherin, this phenotype is caused bya disturbance of mesoderm migration during gastrulation(Kühl et al., 1996).

    In order to determine whether GREUL1 was functioningin an autonomous or nonautonomous fashion, we injected

    399E3 Ubiquitin Ligase GREUL1

    © 2002 Elsevier Science (USA). All rights reserved.

  • 500 pg of GREUL1 mRNA into the prospective ectoderm ofthe one-cell Xenopus embryo. These embryos were har-vested at late neurula stages (19–21) and stained by in situhybridization for both GREUL1 (blue–green) and for XAG-1expression (magenta) (Figs. 1I–1M). The ectopic XAG-1 dotsare strongly correlated with the mouse GREUL1-expressingregions. However, in multiple embryos, we observed ec-topic XAG-1 dots that appeared to be outside the bound-aries of nearby mouse GREUL1-expressing regions (Fig.1M). While we cannot rule out the possibility that there issome weak GREUL1 expression in these cells masked bythe strong magenta XAG-1 staining, this indicates thatneural cells can be generated outside the field of GREUL1-expressing cells.

    GREUL1 Converts Ectoderm into Otx2- and XAG-1-Expressing Cells

    GREUL1 overexpression leads to the ectopic spreading ofanterior neural and cement gland cells throughout theepidermis of the intact embryo. To test whether GREUL1could directly induce anterior neural tissue or cementgland, we coinjected varying doses of GREUL1 mRNA intothe prospective ectoderm of the one-cell Xenopus embryo,cut ectodermal explants at stage 8–9, and harvested theexplants at stage 20. These explants were either analyzed byRT-PCR (Fig. 2A) or by in situ hybridization for neural andcement gland markers (Figs. 2B–2K). The RT-PCR wasoverexposed to visualize even weak neural marker expres-sion. Clearly, GREUL1 can induce both Otx2- and XAG-1-expressing cells. However, GREUL1’s neural inducing abili-ties are less convincing. Using in situ hybridization analysison ectoderm injected with GREUL1, we occasionally ob-serve some cells that express Nrp1. Likewise, by RT-PCRwe do see a reproducible, but faint, increase in NCAMexpression at 500 pg of GREUL1. Therefore, althoughGREUL1 is a direct inducer of XAG-1 and Otx2, it acts as avery weak neural inducer, if at all.

    GREUL1 Sensitizes Ectoderm to NeuralizingSignals

    GREUL1 converts ectodermal explants into Otx2,XAG-1, and rarely Nrp1-positive cells. However, ectopicGREUL1 expression in whole embryos consistently leads toectopic or misplaced neural tissue. This suggests thatGREUL1 either sensitizes the epidermis to respond tointrinsic neural-inducing signals or causes the migration ofneural cells toward or away from GREUL1-expressing cells.

    To test whether GREUL1 sensitizes ectoderm to becomeneural, we placed stage 8–9 ectodermal explants coexpress-ing GREUL1 and lacZ or only expressing lacZ into thelateral flanks of host stage 14 embryos (Fig. 3A, upperpanel). These grafted embryos were allowed to develop foreither 4 or 16 h, and were subsequently analyzed for both�-galactosidase activity and Nrp1 expression. After 4 h,52% (23 grafts in 4 experiments; Table 2) of the GREUL1-

    FIG. 3. GREUL1 makes ectoderm competent to respond toneural-inducing signals. (A) Animal cap explants were cut atstage 8 –9 and transplanted into the lateral flanks of stage 14embryos. At stage 28, transplants were stained with Nrp1 andlacZ. (B) GREUL1-overexpressing grafts were cut from the lat-eral flanks of stage 14 embryos and grafted into uninjectedcontrols. At stage 28, the graft is visible by its punctuate patternof Nrp1 expression. (C) GREUL1-overexpressing neural tubeswere grafted into uninjected control embryos and analyzed forNrp1 expression. Nrp1-positive cells outside the graft were notobserved (red arrow).

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  • expressing ectodermal grafts became neural in character(Table 2). Half of the grafts tested after 16 h also stained forNrp1, suggesting that neural identity was maintained.None of the control grafts became neural after either 4 or16 h. Therefore, GREUL1-treated ectoderm is responsive toneuralizing signals within the embryo.

    To test whether GREUL1 functions to attract endoge-nous neural cells, embryos were injected with GREUL1 andlacZ or only lacZ RNA at the one-cell stage. At stage 14, theexpressing epidermis was grafted into the lateral flanks ofhost embryos (Fig. 3B, upper panel). These grafted embryoswere allowed to develop for 4 h (stage 18–20) or overnight(stage 25–28), and were subsequently stained for both�-galactosidase activity and Nrp1. Regardless of the stage orregion of transplant, we never observe neural tissue leavingthe host neural tube (Fig. 3B, arrow). Conversely, to testwhether GREUL1 functions to repel neural cells, we in-jected GREUL1 RNA into one-cell-stage Xenopus embryos.At stage 14, part of the neural tube was removed and placedinto the neural tube of an uninjected control embryo (arrowFig. 3C, upper panel). After extensive culture, we neverobserved neural cells in the epidermis of the host (Fig. 3C,arrow; Table 2). A caveat of these experiments is thatGREUL1 is only expressed in a confined area of the embryoand may not be widespread enough to visualize migrationeffects. To solve this problem, we transplanted prospectiveneural plates into GREUL1 or control embryos (Mariani etal., 2001), but were unable to observe obvious migrationeffects (data not shown). Therefore, from our transplanta-tion data, the migration hypothesis seems unlikely and wefavor the first explanation that GREUL1 makes graftssusceptible to neuralizing signals within the embryo.

    Xenopus GREUL1 Is Expressed in the CementGland and Mouse GREUL1 Is Expressed inBranchial Arches and Extraembryonic Lineages

    Since mouse GREUL1 can alter neural patterning whenexpressed in Xenopus embryos, we cloned the Xenopus

    FIG. 4. XGREUL1 is expressed in the cement gland, cranialplacodes, and the pronephros. Whole-mount in situ hybridizationof Xenopus embryos using XGREUL1 antisense and sense probes.(A) Eight-cell-stage embryos; upper embryo showing GREUL1expression in the animal hemisphere, the lower embryo is a sensecontrol. (B) Anterior view of stage 20 embryos exhibiting cementgland staining, lower embryo is the sense control. Embryos werecleared with benzyl benzoate:benzyl alcohol (1:1). Stage 27 (C),stage 39 (D), and stage 42 (E) embryos expressing XGREUL1 in thelateral line system, the pronephros, the olfactory placode, and theotic vesicle. (F) RT-PCR showing GREUL1 expression duringXenopus development and using ODC as a control. Abbreviations:cg, cement gland; m, migratory primordium of middle trunk line;pAD, anterodorsal lateral line placode; pd, pronephric duct; g,pronephric tubules; pOl, olfactory placode; ot, otic vesicle.

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  • GREUL1 (XGREUL1) to determine its endogenous expres-sion pattern. XGREUL1 was cloned by RT-PCR from stage36–40 RNA. RT-PCR demonstrates that XGREUL1 ispresent as a maternal transcript and continues to be ex-pressed at all stages analyzed (Fig. 4F). By whole-mount insitu hybridization, maternal XGREUL1 is localized in theanimal hemisphere (Fig. 4A). From gastrula through stage15, the transcript is not clearly localized, although it isstronger throughout the embryo than the sense controls(data not shown). Starting with stage 16, the predominantarea of expression is within the developing cement gland(Fig. 4B). At stage 27, XGREUL1 expression is detected inthe anterodorsal lateral line placode, the olfactory placode,and the otic vesicle (Fig. 4C). This staining persists in laterstages, becoming strongly expressed in the extending lateralline system and in the pronephros (Figs. 4D and 4E).

    Unlike XGREUL1, whose early expression is confined totissues of ectodermal origin, like the cement gland, thelateral line system, and the olfactory placode, mouseGREUL1 is expressed in tissues of different origin. MouseGREUL1 is expressed in several discrete locations duringembryonic development (Fig. 5), some of which are ex-traembryonic and have no amphibian evolutionary counter-

    part. Prior to e9.5, the major sites of GREUL1 expression arein the extraembryonic tissues. At e6.0, GREUL1 is ex-pressed in both the extraembryonic endoderm and extraem-bryonic ectoderm, in a band just proximal to the embryoproper (Fig. 5A, see arrow). By e6.5, this expression hasexpanded proximally, but still is exclusively extraembry-onic (Fig. 5B). After the beginning of gastrulation, GREUL1expression remains extraembryonic, and is mostly confinedto the visceral endoderm, with the exception of the chori-onic ectoderm (Fig. 5C). Expression within the visceralendoderm is now much further distal, invading the embry-onic territory and encompassing the most proximal por-tions of visceral endoderm surrounding the embryo proper(Fig. 5C, arrow). At e8.5, the expression of GREUL1 appearswithin the mesodermally derived allantois, and is highlyexpressed in the epithelial layer of the yolk sac, which isderived from the extraembryonic endoderm (Figs. 5D and5E). This epithelial layer surrounds the mesodermally de-rived blood islands (Fig. 5F). Continuous with the epithelialyolk sac, the hindgut diverticulum invaginates at this stage,and by e9.5, GREUL1 expression is detected within thehindgut and adjoining yolk sac (Figs. 5E, arrow, and 5H,small arrow). GREUL1 expression is maintained within thehindgut, and continues to be expressed within the develop-ing gut tube during subsequent stages (Fig. 5G). Therefore,GREUL1 expression is first seen within the embryo properin the forming gut tube. By stage e10, GREUL1 appears tobe widely expressed throughout the embryo, but stainsmost prominently within the branchial arches (Fig. 5I) andwithin intersomitic endothelial cells (data not shown). Inthe extraembryonic tissues, GREUL1 continues to be ex-pressed at least until e13.5, especially within the yolk sacand umbilical cord (Fig. 5K, arrow), which is consistentwith earlier sites of expression.

    GREUL1 Is a Member of a New Family of RINGFinger Proteins

    GREUL1 is a member of a new family of proteins thatcontain a C3H2C3 RING finger and share a commonancestor with D. melanogaster Goliath (Gol; G1). Goliath,is known to be expressed in the ventral mesoderm of

    TABLE 1Phenotype of Stage 30-35 Xenopus Embryos Injected with GREUL1 or Its RING Finger Mutant (C1C2)

    Construct RNA/DNA Conc. (pg) # Exp. Normal (%) Post. (%) Dupl. (%) Ventralized (%) Deform. (%)

    GREUL1 RNA 250 175 4 25 67 0 0 8GREUL1 RNA 500 104 3 27 56 0 2 14GREUL1 DNA 60 167 2 32 60 0 3 5GREUL1 DNA 120 117 2 31 50 3 14 0C1C2 mutant RNA 500 148 3 78 22 0 0 0

    Note. #, number of embryos; exp, number of experiments; post, posteriorized; dupl., duplications (cement gland or axis); deform.,deformations.

    TABLE 2Transplantation Experiments

    Type Injection Time Nrp-1 (%) # Exp.

    ectod. g. (Fig. 3A) lacZ control 4 h 0 15 4ectod. g. (Fig. 3A) GREUL1 4 h 52 23 4ectod. g. (Fig. 3A) lacZ control o.N. 0 8 3ectod. g. (Fig. 3A) GREUL1 o.N. 50 6 2lateral g. (Fig. 3B) lacZ control 4 h 0 3 1lateral g. (Fig. 3B) GREUL1 4 h 45 11 6lateral g. (Fig. 3B) lacZ control o.N. 0 4 1lateral g. (Fig. 3B) GREUL1 o.N. 64 11 6NT g. (Fig. 3C) GREUL1 o.N. 100 6 2

    Note. #, number of transplants; exp., number of experiments;o.N., overnight; ectod. g., ectodermal grafts; lateral g., lateral grafts;NT g., neural tube grafts.

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  • Drosophila embryos (Bouchard and Cote, 1993), but nomutations exist that might define its function. In mice andhumans, the family consists of GREUL1, G1RP, and fourpreviously undescribed paralogs, GREUL2–5 (Fig. 6). G1RPwas cloned from a mouse myeloblastic cell line and isup-regulated following removal of IL-3 (Baker and Reddy,2000). The Goliath family shares a common motif architec-ture consisting of a signal peptide, a protease-associateddomain (PA domain) containing a conserved cytosine pair, atransmembrane (TM) domain, and a RING domain (Figs. 6Aand 6C). The N terminus is predicted to be lumenal orextracellular and the C terminus is cytosolic. Among theproteins, similarity decreases abruptly C-terminal to theRING, such that each mammalian paralog has a uniqueC-terminal end. In Drosophila, comparisons of GoliathmRNA sequences reveal two different alternatively splicedC-terminal ends. Additionally, both mouse and humanG1RP are predicted to have a second transmembrane do-main near their C-terminal end.

    Phylogenetic analysis of available Goliath family proteinsequences from mammals, chicken, pufferfish, and frogallows us to make some conclusions about the evolution ofthis family of proteins (Fig. 6B). A series of duplicationsis observed in the vertebrate lineage, producing the sixGoliath family paralogs that are found in mammals. Allvertebrate sequences, including three pufferfish predictedproteins, group after duplications that produce four clades:G1RP, GREUL5, GREUL4, and the GREUL1–3 proteins.Hence, these duplications are likely to have occurred earlyin vertebrate evolution, before the divergence of the teleostand tetrapod lineages. This tree also shows that GREUL1belongs to a group of proteins, including GREUL2 andGREUL3, that are evolving faster than the other G1 familymembers. The partial sequence of the frog Goliath familyprotein groups orthologously with the GREUL1 proteins,inside the split from GREUL1 and GREUL2, and as such werefer to it as XGREUL1.

    GREUL1 Is an E3 Ubiquitin Ligase

    Several RING-containing proteins have been shown tofunction as E3 ubiquitin ligases, and this function has beendirectly tied to the RING motif (Fang et al., 2000; Joazeiroet al., 1999; Lorick et al., 1999). To determine whetherGREUL1 functions as an E3 ubiquitin ligase, we generateda GST fusion protein to the C-terminal domain (aminoacids 231–428) of the GREUL1 protein (GSTC-term), aswell as an additional fusion construct identical except forreplacement of the first two cysteines in the RING withglycines (amino acids 277 and 280) (Fig. 7A). These proteinswere then used in an in vitro assay for E3 activity (Fig. 7B).Various concentrations of both the GSTC-term andGST�C1C2 were combined with previously purified com-ponents of the ubiquitination machinery, including an E1,E2 (ubc5), and FLAG-tagged ubiquitin. The Apc2/Apc11complex was used as a positive control for the reaction(Gmachl et al., 2000). The reactions were incubated and

    analyzed by Western blotting with anti-FLAG antibody. Asshown in Fig. 7B, polyubiquitin chains were formed inresponse to the addition of the C-terminal wild-typeGREUL1 protein at concentrations of 30 and 100 ng. In thepresence of GST�C1C2, no polyubiquitin chains wereformed, demonstrating that the first two cysteines of theRING are critical for E3 function. This experiment showsthat GREUL1 can function as an E3 ubiquitin ligase tocatalyze polyubiquitin chains in vitro and that this activityis dependent on the integrity of the RING.

    To test whether the RING domain is also necessary forthe generation of ectopic cement gland, we overexpressed afull-length RING finger with the same deleted cysteinesthat abolished function in the ubiquitin assay. Xenopusembryos were injected with 1 ng of �C1C2 GREUL1mRNA (Fig. 7C) or with 1 ng of the wild type construct (Fig.7D) as a positive control. In situ hybridization using thecement gland marker XAG-1 showed that only wild typeGREUL1 lead to ectopic marker expression. This demon-strates that a functional RING domain, and as thus ubiq-uitin activity, is essential for GREUL1’s ability to inducecement gland.

    DISCUSSION

    The localization of XGREUL1 in the Xenopus cementgland and cranial placodes coupled with its ortholog’sability to convert ectoderm into cells expressing XAG-1 andXotx2 strongly suggests it has a role in the establishment ofthese anterior ectodermal structures. Both the cementgland and the cranial placodes develop at the boundary ofthe neural plate and the presumptive epidermis. Thisboundary is thought to form due to the juxtapositionbetween BMPs and their antagonists (Baker and Bronner-Fraser, 2001). Several lines of evidence indicate that a BMP4gradient patterns the anterior ectoderm with the cementgland containing a higher dose of BMP4 than the adjacentforebrain. Molecules that function as antagonists of BMP4,including noggin and chordin, can cause ectoderm to formeither anterior neural tissue or cement gland, depending onthe dose each cell receives (Knecht et al., 1995; Wilson etal., 1997). Cement gland can also be formed from ectodermin response to molecules that are not potent neural induc-ers, including Pitx1, Pitx2c, Xotx5b (Chang et al., 2001;Schweickert et al., 2001; Vignali et al., 2000), and now,GREUL1. In ectodermal explants, these molecules are ableto activate the expression of Xotx2 and XAG-1 withoutsignificant neural marker induction (Chang et al., 2001;Vignali et al., 2000). These cement gland-inducing mol-ecules inhibit BMP4 signaling and epidermal fate to a lesserdegree than potent neural inducers, resulting in intermedi-ate BMP levels and subsequent cement gland development.

    GREUL1 overexpression within the whole embryo leadsto ectopic neural development, even though it only weaklyinduces neural tissue in naı̈ve ectoderm. This suggests thatGREUL1 can predispose ectodermal cells to a neural fate,

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  • similar to that seen in Xotx5b- and Xotx2-injected embryos(Vignali et al., 2000). Our experiments show that GREUL1-expressing ectoderm becomes neural when transplantedinto lateral epidermal domains, suggesting that it canrespond to endogenous neuralizing signals after gastrula-tion. Therefore, we hypothesize that GREUL1 inhibitsepidermal fates and sensitizes the ectoderm to signals fromunderlying tissues.

    The evolutionary significance of GREUL1 activity andlocalization in frogs and mice remains elusive. Throughoutembryonic development, mouse GREUL1 is predominantlyexpressed within extraembryonic tissues, which do notexist in the amphibian. Furthermore, mouse GREUL1 isexpressed in areas of endodermal and mesodermal origin,including the gut tube and the branchial arches. In the frog,we cannot be certain that Xenopus GREUL1 is excludedfrom similar regions, as there does exist a low level ofexpression along the dorsal side during neurula stages andwithin the head region (data not shown). Clearly, however,the major areas of expression in Xenopus are within thecement gland, which does not have a mammalian structural

    FIG. 5. Histological analysis of mouse embryos stained by whole-mount in situ hybridization for GREUL1. (A) e6.0 embryo demon-strating GREUL1 expression prior to gastrulation in the extraem-bryonic endoderm and extraembryonic ectoderm (arrow). (B, C)e6.5 and e7.5 embryos demonstrating GREUL1 expression only inthe extraembryonic ectoderm and extraembryonic endoderm. Xecin (B) points to the extraembryonic ectodermal portion of thedeveloping posterior amnionic fold, while Cec in (C) denotesexpression in the chronic extraembryonic ectoderm. (D) Whole-mount of an e8.5 embryo demonstrating GREUL1 expression in theallantois (arrow). (E) Sagittal section of an e8.5 embryo showingGREUL1 expression in the allantois (a) and epithelial yolk sac (eys).The mesodermally derived blood islands (bi) do not expressGREUL1. Arrow points to site of hindgut invagination. (F) Highmagnification of the yolk sac at e9.0 detailing GREUL1 expressionin the epithelial yolk sac layer (eys), but not the blood islands or themesodermal yolk sac layer (mys). (G) Whole-mount in situ hybrid-ization of an e9.0 embryo demonstrating the strong posteriorGREUL1 staining, some of which is the primitive hindgut. (H)Transverse section through an e9.0 embryo. The upper right corneris a section through the posterior midline region, whereas the lowerleft corner is further anterior. The small arrow points to GREUL1expression in the primitive hindgut, which is continuous in thissection with the epithelial yolk sac layer. The large arrow ispointing to GREUL1 expression in the yolk sac. (I) Sagittal sectionof a stage 10 mouse embryo. Upper figure is a higher magnificationof the area marked in the lower figure. (K) An e13.5 embryoshowing staining in the umbilical cord (white arrow). Abbrevia-tions: 1ba, mandibular component of the first branchial arch; 2ba,second branchial arch; a, allantois; bi, blood island; Cec, chorionicextraembryonic ectoderm; ec, ectoderm; en, endoderm; eys, epithe-lial layer of yolk sac; m, mesoderm; mys, mesodermal yolk sac;Xed, extraembryonic endoderm; Xec, extraembryonic ectoderm.Magnification is as follows: (A–C) 200�, (D) 50�, (F) 400�, (G)40�, (E, H) 100�, (I) 30� (lower) and 80� (upper).

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  • counterpart, and within the placodes. Based upon theseexpression differences, one might argue that these proteinsare not true orthologs. However, XGREUL1 is more similarto mouse GREUL1 than to any of the other mouse Goliathfamily paralogs, and our phylogenetic analysis stronglysuggests that XGREUL1 is directly orthologous to mouseGREUL1. Regardless, we have identified only one represen-tative of this family from frogs. Further study may identifyother GREUL1-like Xenopus genes which are expressedmore similarly to mouse GREUL1. Conversely, it remains

    plausible that the closest mouse paralogs, GREUL2 andGREUL3, have expression profiles more similar to that ofthe Xenopus gene. However, preliminary experiments withthese paralogs have failed to recapitulate the Xenopusoverexpression phenotype seen with mouse GREUL1, andhave not revealed any placodal expression, suggestingthat the effect we are seeing is specific to mouseGREUL1. It is also possible that the expression pattern ofGREUL1 has simply not been conserved from frogs to mice.This is a difficult proposition considering the faithful con-

    FIG. 6. The Goliath family has six vertebrate members related to D. melanogaster Goliath. (A) Protein alignment of the region from thetransmembrane domain to the RING domain, including Drosophila Goliath and its mammalian orthologs. Except for GREUL1, only onerepresentative is shown for each human/mouse ortholog pair. C-terminal XGREUL1 sequence is unknown. Amino acids identical to theconsensus are darkly shaded, and similarities, as defined by ClustalW, are lightly shaded. m, M. musculus; h, H. sapiens; x, X. laevis; fly,D. melanogaster. The transmembrane and the RING domains are highlighted in yellow and blue, respectively. (B) Summary of the motifarchitecture of the Goliath family proteins. Green triangle, predicted signal sequence cleavage site; magenta box, PA domain; the conservedcytosine pair within the PA domain is shown as a disulfide bridge; yellow box, predicted transmembrane domain; blue box, C3H2C3 RINGdomain. (C) Maximum likelihood phylogeny of the Goliath family proteins, based on the informative regions of an alignment of thevertebrate proteins, and rooted with D. melanogaster Goliath. Four main branches of the tree are marked with brackets.

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  • servation of expression domains in many other gene fami-lies. A more complete analysis of frog paralogs and of latermouse stages should help to clarify these issues.

    The Goliath family is a member of a superfamily ofproteins that span the eukaryotic phyla and share a com-mon motif architecture, including a signal peptide, PAdomain with cysteine pair, transmembrane domain, andRING. Within vertebrates, this new group includes theGoliath family of proteins described here and the RZFproteins (Tranque et al., 1996). Aside from the informationpresented in this paper, functional information does notexist for any of these vertebrate members. Proteins withsimilar motifs to the Goliath family proteins can be foundin plants and yeast. The Arabidopsis ReMembR-H2 pro-teins and the Saccharomyces cerevisiae Tul1 protein areinvolved in vacuolar sorting. In yeast, vacuolar sorting isused to target specific transmembrane proteins for degrada-tion (Jiang et al., 2000; Reggiori and Pelham, 2002).

    Many developmental signaling pathways have beenshown to be mediated by ubiquitin. To date, ubiquitin isbest known for its role as a negative regulator in many ofthese pathways. It has recently become clear that ubiquit-in’s role goes well beyond protein degradation, participatingin a variety of processes from vesicle sorting to transcrip-tion factor activation (Hicke, 2001). RING-containing pro-teins, however, have been shown to ubiquitinate and de-stroy specific protein targets (Fang et al., 2000; Joazeiro etal., 1999; Lorick et al., 1999). This suggests that, althoughGREUL1 could be affecting embryonic patterning via a hostof mechanisms, it is most likely leading to degradation of aparticular signal via its RING domain. We are currentlysearching for the GREUL1 substrate, which may help toplace the GREUL proteins into a specific signal transduc-tion pathway.

    In this paper, we have shown that GREUL1 is a memberof a family of RING E3 ligases, which can sensitize epider-mis to adopt a neural fate and can directly induce anteriorectoderm. The specificity of these functions allows us topropose that GREUL1 is a new mediator of anterior ecto-dermal patterning in Xenopus. Further genetic approachesare currently underway to demonstrate this role in bothfrogs and mice.

    Apc11 (Apc2/11) complex was used as a control. Lower panel:Western blot with GST antibody showing the actual amount ofGSTC-term and GST�C1C2 added to the above reactions. 10, 30,and 100 ng of total purified GSTC-term and 10, 30, 100, 300, and900 ng of total purified GST�C1C2 was used in each reaction. Only30 and 100 ng of GSTC-term were able to catalyze ubiquitination.The size of the protein band is 49 kDa. (C, D) A functional RINGdomain is necessary for XAG-1 induction. 1 ng of either wild typeGREUL1 (D) or �C1C2 GREUL1 (C) was injected into two-cellembryos and stained by in situ hybridization for XAG-1. EctopicXAG-1 dots are not apparent in the �C1C2 GREUL1-injectedembryos.

    FIG. 7. GREUL1 functions as an E3 ubiquitin ligase and the RINGdomain is necessary for both E3 activity and XAG-1 induction. (A)Comparison of the GST fusion constructs to wild type GREUL1.Abbreviations: TM, transmembrane domain; RING, RING fingerdomain; wt, wild type; *, point mutation (cysteine replaced byglycine); the triangle represents the signal peptide cleavage site. (B)Upper panel: Western-blot with FLAG antibody visualizing FLAG-tagged ubiquitin chains, ranging from 25 to 250 kDa. The Apc2/

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  • ACKNOWLEDGMENTS

    We thank Arend Sidow and Rami Aburomia (Stanford) forevolutionary expertise and use of data analysis tools. We aregrateful to Eric Davidson (Cal Tech) for generously lending theQ-bot to array cDNA libraries and to Jianing Huang and RubyDaniel for the FLAG-tagged ubiquitin protein. We also acknowl-edge the contributions and advice from Tim Grammer, Dale Frank,Kari Dickinson, and Francesca Mariani. Predicted Fugu proteinsequences were provided freely by the Fugu Genome Consortiumfor use in this publication only. This work was supported by agenerous grant from the Baxter Foundation (to J.C.B.) and a grantfrom the National Institutes of Health (ROI HD 41557). We thankthe NSF for predoctoral support of A.L.H., and the StanfordUniversity Dean’s Fellowship for support of A.G.M.B.

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    Received for publication October 29, 2001Revised August 5, 2002

    Accepted August 5, 2002Published online October 10, 2002

    408 Borchers et al.

    © 2002 Elsevier Science (USA). All rights reserved.

    INTRODUCTIONFIG. 1FIG. 2

    MATERIALS AND METHODSRESULTSFIG. 3FIG. 4TABLE 1TABLE 2

    DISCUSSIONFIG. 5FIG. 6FIG. 7

    ACKNOWLEDGMENTSREFERENCES