taxonomic outline - bergey's · taxonomic outline phylum class order family genus...

32
Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia Acidobacteriales Acidobacteriaceae Acidobacterium Edaphobacter Terriglobus Holophagae Acanthopleuribacterales Acanthopleuribacteraceae Acanthopleuribacter Holophagales Holophagaceae Geothrix Holophaga Actinobacteria Acidimicrobiia Acidimicrobiales Acidimicrobiaceae Acidimicrobium Ferrimicrobium Ferrithrix Iamiaceae Iamia Actinobacteria Actinomycetales Actinomycetaceae Actinobaculum Actinomyces Arcanobacterium Mobiluncus Varibaculum Actinopolysporales Actinopolysporaceae Actinopolyspora Bifidobacteriales Bifidobacteriaceae Aeriscardovia Alloscardovia Bifidobacterium Gardnerella Metascardovia Parascardovia Scardovia

Upload: trinhdien

Post on 28-Jul-2018

293 views

Category:

Documents


3 download

TRANSCRIPT

Page 1: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Taxonomic Outline

Phylum Class Order Family Genus

Acidobacteria

Acidobacteriia

Acidobacteriales

Acidobacteriaceae

Acidobacterium

Edaphobacter

Terriglobus

Holophagae

Acanthopleuribacterales

Acanthopleuribacteraceae

Acanthopleuribacter

Holophagales

Holophagaceae

Geothrix

Holophaga

Actinobacteria

Acidimicrobiia

Acidimicrobiales

Acidimicrobiaceae

Acidimicrobium

Ferrimicrobium

Ferrithrix

Iamiaceae

Iamia

Actinobacteria

Actinomycetales

Actinomycetaceae

Actinobaculum

Actinomyces

Arcanobacterium

Mobiluncus

Varibaculum

Actinopolysporales

Actinopolysporaceae

Actinopolyspora

Bifidobacteriales

Bifidobacteriaceae

Aeriscardovia

Alloscardovia

Bifidobacterium

Gardnerella

Metascardovia

Parascardovia

Scardovia

Page 2: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Catenulisporales

Actinospicaceae

Actinospica

Catenulisporaceae

Catenulispora

Corynebacteriales

Corynebacteriaceae

Corynebacterium

Turicella

Dietziaceae

Dietzia

Mycobacteriaceae

Mycobacterium

Nocardiaceae

Gordonia

Millisia

Nocardia

Rhodococcus

Skermania

Smaragdicoccus

Williamsia

Segniliparaceae

Segniliparus

Tsukamurellaceae

Tsukamurella

Frankiales

Acidothermaceae

Acidothermus

Cryptosporangiaceae

Cryptosporangium

incertae SedisI.Fodinicola

Frankiaceae

Frankia

Geodermatophilaceae

Blastococcus

Geodermatophilus

Modestobacter

Nakamurellaceae

Humicoccus

Nakamurella

Sporichthyaceae

Sporichthya

Glycomycetales

Glycomycetaceae

Glycomyces

Stackebrandtia

Jiangellales

Jiangellaceae

Haloactinopolyspora

Jiangella

Kineosporiales

Kineosporiaceae

Kineococcus

Kineosporia

Quadrisphaera

Micrococcales

Page 3: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Beutenbergiaceae

Beutenbergia

Miniimonas

Salana

Serinibacter

Bogoriellaceae

Bogoriella

Georgenia

Brevibacteriaceae

Brevibacterium

Cellulomonadaceae

Cellulomonas

Oerskovia

Tropheryma

incertae SedisActinotalea

incertae SedisDemequina

Dermabacteraceae

Brachybacterium

Dermabacter

Dermacoccaceae

Demetria

Dermacoccus

Kytococcus

Dermatophilaceae

Dermatophilus

Kineosphaera

Intrasporangiaceae

Arsenicicoccus

Humihabitans

Intrasporangium

Janibacter

Knoellia

Kribbia

Lapillicoccus

Ornithinicoccus

Ornithinimicrobium

Oryzihumus

Phycicoccus

Serinicoccus

Terrabacter

Terracoccus

Tetrasphaera

Jonesiaceae

Jonesia

Microbacteriaceae

Agreia

Agrococcus

Agromyces

Clavibacter

Cryobacterium

Curtobacterium

Frigoribacterium

Frondihabitans

Gulosibacter

Humibacter

Labedella

Page 4: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Leifsonia

Leucobacter

Microbacterium

Microcella

Microterricola

Mycetocola

Okibacterium

Phycicola

Plantibacter

Pseudoclavibacter

Rathayibacter

Rhodoglobus

Salinibacterium

Subtercola

Yonghaparkia

Micrococcaceae

Acaricomes

Arthrobacter

Citricoccus

Kocuria

Micrococcus

Nesterenkonia

Renibacterium

Rothia

Yaniella

Zhihengliuella

Promicromonosporaceae

Cellulosimicrobium

Isoptericola

Myceligenerans

Promicromonospora

Xylanibacterium

Xylanimicrobium

Xylanimonas

Rarobacteraceae

Rarobacter

Ruaniaceae

Haloactinobacterium

Ruania

Sanguibacteraceae

Sanguibacter

Micromonosporales

Micromonosporaceae

Actinocatenispora

Actinoplanes

Asanoa

Catellatospora

Catenuloplanes

Couchioplanes

Dactylosporangium

Krasilnikovia

Longispora

Luedemannella

Micromonospora

Pilimelia

Polymorphospora

Page 5: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Salinispora

Spirilliplanes

Verrucosispora

Virgisporangium

Propionibacteriales

Nocardioidaceae

Actinopolymorpha

Aeromicrobium

Kribbella

Marmoricola

Nocardioides

Propionibacteriaceae

Aestuariimicrobium

Brooklawnia

Friedmanniella

Granulicoccus

Luteococcus

Microlunatus

Micropruina

Propionibacterium

Propionicicella

Propionicimonas

Propioniferax

Propionimicrobium

Tessaracoccus

Pseudonocardiales

Pseudonocardiaceae

Actinoalloteichus

Actinokineospora

Actinosynnema

Amycolatopsis

Crossiella

Goodfellowiella

Kibdelosporangium

Kutzneria

Lechevalieria

Lentzea

Prauserella

Pseudonocardia

Saccharomonospora

Saccharopolyspora

Saccharothrix

Streptoalloteichus

Thermocrispum

Umezawaea

Streptomycetales

Streptomycetaceae

Streptomyces

incertae SedisI.Kitasatospora

incertae SedisII.Streptacidiphilus

Streptosporangiales

Nocardiopsaceae

Haloactinospora

Nocardiopsis

Streptomonospora

Page 6: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Thermobifida

Streptosporangiaceae

Acrocarpospora

Herbidospora

Microbispora

Microtetraspora

Nonomuraea

Planobispora

Planomonospora

Planotetraspora

Sphaerisporangium

Streptosporangium

Thermopolyspora

Thermomonosporaceae

Actinocorallia

Actinomadura

Spirillospora

Thermomonospora

incertae Sedis

Thermobispora

Coriobacteriia

Coriobacteriales

Coriobacteriaceae

Atopobium

Collinsella

Coriobacterium

Cryptobacterium

Denitrobacterium

Eggerthella

Olsenella

Slackia

Nitriliruptoria

Euzebyales

Euzebyaceae

Euzebya

Nitriliruptorales

Nitriliruptoraceae

Nitriliruptor

Rubrobacteria

Rubrobacterales

Rubrobacteraceae

Rubrobacter

Thermoleophilia

Solirubrobacterales

Conexibacteraceae

Conexibacter

Patulibacteraceae

Patulibacter

Solirubrobacteraceae

Solirubrobacter

Thermoleophilales

Thermoleophilaceae

Thermoleophilum

Aquificae

Aquificae

Aquificales

Page 7: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Aquificaceae

Aquifex

Calderobacterium

Hydrogenobacter

Thermocrinis

incertae SedisI.Desulfurobacterium

Bacteroidetes

Bacteroidia

Bacteroidales

Bacteroidaceae

Acetofilamentum

Acetomicrobium

Acetothermus

Anaerorhabdus

Bacteroides

Marinilabiliaceae

Alkaliflexus

Anaerophaga

Marinilabilia

Porphyromonadaceae

Barnesiella

Dysgonomonas

Paludibacter

Petrimonas

Porphyromonas

Proteiniphilum

Tannerella

Prevotellaceae

Prevotella

Xylanibacter

Rikenellaceae

Alistipes

Rikenella

Cytophagia

Cytophagales

Cyclobacteriaceae

Algoriphagus

Aquiflexum

Belliella

Cyclobacterium

Echinicola

Rhodonellum

Cytophagaceae

Adhaeribacter

Arcicella

Cytophaga

Dyadobacter

Effluviibacter

Emticicia

Flectobacillus

Flexibacter

Hymenobacter

Larkinella

Leadbetterella

Meniscus

Microscilla

Page 8: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Pontibacter

Runella

Spirosoma

Sporocytophaga

Flammeovirgaceae

Fabibacter

Flammeovirga

Flexithrix

Persicobacter

Reichenbachiella

Roseivirga

Incertae SedisII

Rhodothermaceae

Rhodothermus

Salinibacter

Incertae SedisIII

Thermonema

Incertae SedisIV

Toxothrix

Flavobacteriia

Flavobacteriales

Blattabacteriaceae

Blattabacterium

Cryomorphaceae

Brumimicrobium

Crocinitomix

Cryomorpha

Fluviicola

Lishizhenia

Owenweeksia

Flavobacteriaceae

Aequorivita

Algibacter

Aquimarina

Arenibacter

Bergeyella

Bizionia

Capnocytophaga

Cellulophaga

Chryseobacterium

Cloacibacterium

Coenonia

Costertonia

Croceibacter

Dokdonia

Donghaeana

Elizabethkingia

Empedobacter

Epilithonimonas

Flaviramulus

Flavobacterium

Formosa

Gaetbulibacter

Gelidibacter

Gillisia

Gramella

Page 9: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Kaistella

Kordia

Krokinobacter

Lacinutrix

Leeuwenhoekiella

Lutibacter

Maribacter

Mariniflexile

Mesonia

Muricauda

Myroides

Nonlabens

Olleya

Ornithobacterium

Persicivirga

Polaribacter

Psychroflexus

Psychroserpens

Riemerella

Robiginitalea

Salegentibacter

Sandarakinotalea

Sediminicola

Sejongia

Stenothermobacter

Subsaxibacter

Subsaximicrobium

Tenacibaculum

Ulvibacter

Vitellibacter

Wautersiella

Weeksella

Winogradskyella

Yeosuana

Zhouia

Zobellia

Sphingobacteriia

Sphingobacteriales

Chitinophagaceae

Chitinophaga

Terrimonas

Saprospiraceae

Aureispira

Haliscomenobacter

Lewinella

Saprospira

Sphingobacteriaceae

Pedobacter

Sphingobacterium

Chlamydiae

Chlamydiia

Chlamydiales

“CandidatusClavichlamydiaceae”

“CandidatusClavichlamydia”

“CandidatusPiscichlamydiaceae”

“CandidatusPiscichlamydi

Page 10: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

a”

Chlamydiaceae

Chlamydia

Criblamydiaceae

Criblamydia

Parachlamydiaceae

Neochlamydia

Parachlamydia

Protochlamydia

Rhabdochlamydiaceae

Rhabdochlamydia

Simkaniaceae

“Candidatus Fritschea”

Simkania

Waddliaceae

Waddlia

Chlorobi

“Chlorobia”

“Chlorobiales”

“Chlorobiaceae”

Ancalochloris

Chlorobium

Chloroherpeton

Pelodictyon

Prosthecochloris

Green Sulfur Bacteria

Green Sulfur Bacteria, Addendum: Phototrophic Green Sulfur Bacteria Living in Consortia with Other Microorganisms

Chloroflexi

“Chloroflexi”

“Chloroflexales”

“Chloroflexaceae”

Chloroflexus

Chloronema

Heliothrix

Oscillochloris

“Herpetosiphonales”

“Herpetosiphonaceae”

Herpetosiphon

Chrysiogenetes

Chrysiogenetes

Chrysiogenales

Chrysiogenaceae

Chrysiogenes

Crenarchaeota

Thermoprotei

Desulfurococcales

Desulfurococcaceae

Aeropyrum

Desulfurococcus

Ignicoccus

Staphylothermus

Stetteria

Sulfophobococcus

Page 11: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Thermodiscus

Thermosphaera

Pyrodictiaceae

Hyperthermus

Pyrodictium

Pyrolobus

Sulfolobales

Sulfolobaceae

Acidianus

Metallosphaera

Stygiolobus

Sulfolobus

Sulfurisphaera

Sulfurococcus

Thermoproteales

Thermofilaceae

Thermofilum

Thermoproteaceae

Caldivirga

Pyrobaculum

Thermocladium

Thermoproteus

Cyanobacteria

GeneralCharacteristicsoftheCyanobacteria

OxygenicPhotosyntheticBacteria

PhylogeneticRelationshipsAmongtheCyanobacteriaBasedonSrRNASequences

SubsectionI

Form-Chamaesiphon

Form-Chroococcus

Form-Cyanobacterium

Form-Cyanobium

Form-Cyanothece

Form-Dactylococcopsis

Form-Gloeobacter

Form-Gloeocapsa

Form-Gloeothece

Form-Microcystis

Form-Prochlorococcus

Form-Prochloron

Form-Synechococcus

Form-Synechocystis

SubsectionII

GeneraReproducingbyMultipleFissionsOnly,orinCombinationwithLimited(1–3)BinaryFissions

Form-Cyanocystis

Form-Dermocarpella

Form-Stanieria

Form-Xenococcus

GenerainWhichExtensiveVegetativeBinaryFissionPrecedesMultipleFission

Form-Chroococcidiopsis

Form-Myxosarcina

Page 12: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Pleurocapsa-group

SubsectionIII

Form-Arthrospira

Form-Borzia

Form-Crinalium

Form-Geitlerinemia

Form-Leptolyngbya

Form-Limnothrix

Form-Lyngbya

Form-Microcoleus

Form-Oscillatoria

Form-Planktothrix

Form-Prochlorothrix

Form-Pseudanabaena

Form-Spirulina

Form-Starria

Form-Symploca

Form-Trichodesmium

Form-Tychonema

SubsectionIV

SubsectionIV.I

Form-Anabaena

Form-Anabaenopsis

Form-Aphanizomenon

Form-Cyanospira

Form-Cylindrospermopsis

Form-Cylindrospermum

Form-Nodularia

Form-Nostoc

Form-Scytonema

SubsectionIV.II

Form-Calothrix

Form-Rivularia

Form-Tolypothrix

SubsectionV

Form-Chlorogloeopsis

Form-Fischerella

Form-Geitleria

Form-Iyengariella

Form-Nostochopsis

Form-Stigonema

Deferribacteres

Deferribactere

Deferribacterales

Deferribacteraceae

Deferribacter

Flexistipes

Geovibrio

Deinococcus-Thermus

Deinococci

Deinococcales

Deinococcaceae

Deinococcus

Thermales

Thermaceae

Meiothermus

Page 13: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Thermus

Dictyoglomi

Dictyoglomia

Dictyoglomales

Dictyoglomaceae

Dictyoglomus

Euryarchaeota

Archaeoglobi

Archaeoglobales

Archaeoglobaceae

Archaeoglobus

Ferroglobus

Halobacteria

Halobacteriales

Halobacteriaceae

Haloarcula

Halobacterium

Halobaculum

Halococcus

Haloferax

Halogeometricum

Halorubrum

Haloterrigena

Natrialba

Natrinema

Natronobacterium

Natronococcus

Natronomonas

Natronorubrum

Methanobacteria

Methanobacteriales

Methanobacteriaceae

Methanobacterium

Methanobrevibacter

Methanosphaera

Methanothermobacter

Methanothermaceae

Methanothermus

Methanococci

Methanococcales

Methanocaldococcaceae

Methanocaldococcus

Methanotorris

Methanococcaceae

Methanococcus

Methanothermococcus

Methanomicrobiales

Methanocorpusculaceae

Methanocorpusculum

Methanomicrobiaceae

Methanoculleus

Methanofollis

Methanogenium

Methanolacinia

Methanomicrobium

Methanoplanus

Page 14: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Methanospirillaceae

Methanospirillum

incertae SedisI.Methanocalculus

Methanosarcinales

Methanosaetaceae

Methanosaeta

Methanosarcinaceae

Methanococcoides

Methanohalobium

Methanohalophilus

Methanolobus

Methanosalsum

Methanosarcina

Methanopyri

Methanopyrales

Methanopyraceae

Methanopyrus

Thermococci

Thermococcales

Thermococcaceae

Pyrococcus

Thermococcus

Thermoplasmata

Thermoplasmatales

Picrophilaceae

Picrophilus

Thermoplasmataceae

Thermoplasma

Fibrobacteres

Fibrobacteria

Fibrobacterales

Fibrobacteraceae

Fibrobacter

Firmicutes

“Bacilli”

Bacillales

“Alicyclobacillaceae”

Alicyclobacillus

Bacillaceae

Alkalibacillus

Amphibacillus

Anoxybacillus

Bacillus

Cerasibacillus

Filobacillus

Geobacillus

Gracilibacillus

Halobacillus

Halolactibacillus

Lentibacillus

Marinococcus

Oceanobacillus

Paraliobacillus

Pontibacillus

Saccharococcus

Tenuibacillus

Page 15: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Thalassobacillus

Virgibacillus

“Listeriaceae”

Brochothrix

Listeria

“Paenibacillaceae”

Ammoniphilus

Aneurinibacillus

Brevibacillus

Cohnella

Oxalophagus

Paenibacillus

Thermobacillus

Pasteuriaceae

Pasteuria

Planococcaceae

Caryophanon

Filibacter

Jeotgalibacillus

Kurthia

Marinibacillus

Planococcus

Planomicrobium

Sporosarcina

Ureibacillus

“Sporolactobacillaceae”

Sporolactobacillus

“Staphylococcaceae”

Jeotigalicoccus

Macrococcus

Salinicoccus

Staphylococcus

“Thermoactinomycetaceae”

Laceyella

Mechercharimyces

Planifilum

Seinonella

Shimazuella

Thermoactinomyces

Thermoflavimicrobium

incertae Sedis

Thermicanus

incertae Sedis

Gemella

incertae Sedis

Exiguobacterium

“Lactobacillales”

“Aerococcaceae”

Abiotrophia

Aerococcus

Dolosicoccus

Eremococcus

Facklamia

Globicatella

Ignavigranum

“Carnobacteriaceae”

Page 16: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Alkalibacterium

Allofustis

Alloiococcus

Atopobacter

Atopococcus

Atopostipes

Carnobacterium

Desemzia

Dolosigranulum

Granulicatella

Isobaculum

Marinilactibacillus

Trichococcus

“Enterococcaceae”

Enterococcus

Melissococcus

Tetragenococcus

Vagococcus

Lactobacillaceae

Lactobacillus

Paralactobacillus

Pediococcus

“Leuconostocaceae”

Leuconostoc

Oenococcus

Weissella

Streptococcaceae

Lactococcus

Lactovum

Streptococcus

“Clostridia”

Clostridiales

Clostridiaceae

Alkaliphilus

Anaerobacter

Anoxynatronum

Caloramator

Caloranaerobacter

Caminicella

Clostridium

Natronincola

Oxobacter

Sarcina

Thermobrachium

Thermohalobacter

Tindallia

“Eubacteriaceae”

Acetobacterium

Alkalibacter

Anaerofustis

Eubacterium

Garciella

Pseudoramibacter

“Gracilibacteraceae”

Gracilibacter

“Heliobacteriaceae”

Page 17: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Heliobacillus

Heliobacterium

Heliophilum

Heliorestis

“Lachnospiraceae”

Acetitomaculum

Anaerostipes

Bryantella

Butyrivibrio

Catonella

Coprococcus

Dorea

Hespellia

Johnsonella

Lachnobacterium

Lachnospira

Moryella

Oribacterium

Parasporobacterium

Pseudobutyrivibrio

Roseburia

Shuttleworthia

Sporobacterium

Syntrophococcus

Peptococcaceae

Cryptanaerobacter

Dehalobacter

Desulfitobacterium

Desulfonispora

Desulfosporosinus

Desulfotomaculum

Pelotomaculum

Peptococcus

Sporotomaculum

Syntrophobotulus

Thermincola

“Peptostreptococcaceae”

Filifactor

Peptostreptococcus

Tepidibacter

“Ruminococcaceae”

Acetanaerobacterium

Acetivibrio

Anaerofilum

Anaerotruncus

Faecalibacterium

Fastidiosipila

Oscillospira

Papillibacter

Ruminococcus

Sporobacter

Subdoligranulum

Syntrophomonadaceae

Pelospora

Syntrophomonas

Syntrophospora

Page 18: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Syntrophothermus

Thermosyntropha

Veillonellaceae

Acetonema

Acidaminococcus

Allisonella

Anaeroarcus

Anaeroglobus

Anaeromusa

Anaerosinus

Anaerovibrio

Centipeda

Dendrosporobacter

Dialister

Megasphaera

Mitsuokella

Pectinatus

Phascolarctobacterium

Propionispira

Propionispora

Quinella

Schwartzia

Selenomonas

Sporomusa

Succiniclasticum

Succinispira

Thermosinus

Veillonella

Zymophilus

incertae Sedis

Anaerococcus

Finegoldia

Gallicola

Helcococcus

Parvimonas

Peptoniphilus

Sedimentibacter

Soehngenia

Sporanaerobacter

Tissierella

incertae Sedis

Acidaminobacter

Fusibacter

Guggenheimella

incertae Sedis

Anaerovorax

Mogibacterium

incertae Sedis

Anaerobranca

incertae Sedis

Carboxydocella

incertae Sedis

Sulfobacillus

Thermaerobacter

incertae Sedis

Symbiobacterium

Page 19: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

incertae Sedis

Acetoanaerobium

Halanaerobiales

Halanaerobiaceae

Halanaerobium

Halocella

Halothermothrix

Halobacteroidaceae

Acetohalobium

Halanaerobacter

Halobacteroides

Halonatronum

Natroniella

Orenia

Selenihalanaerobacter

Sporohalobacter

Thermoanaerobacterales

Thermoanaerobacteraceae

Ammonifex

Caldanaerobacter

Carboxydothermus

Gelria

Moorella

Thermacetogenium

Thermanaeromonas

Thermoanaerobacter

Thermodesulfobiaceae

Coprothermobacter

Thermodesulfobium

incertae Sedis

Caldicellulosiruptor

Thermoanaerobacterium

Thermosediminibacter

Thermovenabulum

incertae Sedis

Mahella

Erysipelotrichia

Erysipelotrichales

Erysipelotrichaceae

Allobaculum

Bulleidia

Catenibacterium

Coprobacillus

Erysipelothrix

Holdemania

Solobacterium

Turicibacter

Fusobacteria

Fusobacteriia

Fusobacteriales

Fusobacteriaceae

Cetobacterium

Fusobacterium

Ilyobacter

Propionigenium

Page 20: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Leptotrichiaceae

Leptotrichia

Sebaldella

Sneathia

Streptobacillus

Gemmatimonadetes

Gemmatimonadetes

Gemmatimonadales

Gemmatimonadaceae

Gemmatimonas

Lentisphaerae

Lentisphaeria

Lentisphaerales

Lentisphaeraceae

Lentisphaera

Victivallales

Victivallaceae

Victivallis

Nitrospirae

“Nitrospira”

“Nitrospirales”

“Nitrospiraceae”

“CandidatusMagnetobacterium”

Leptospirillum

Nitrospira

Thermodesulfovibrio

Planctomycetes

Planctomycetia

“CandidatusBrocadiales”

“CandidatusBrocadiaceae”

Planctomycetales

Planctomycetaceae

Blastopirellula

Gemmata

Isosphaera

Pirellula

Planctomyces

Rhodopirellula

Schlesneria

Singulisphaera

Proteobacteria

Alphaproteobacteria

Caulobacterales

Caulobacteraceae

Asticcacaulis

Brevundimonas

Caulobacter

Phenylobacterium

Rhizobiales

Bartonellaceae

Bartonella

Beijerinckiaceae

Beijerinckia

Chelatococcus

Methylocella

Bradyrhizobiaceae

Page 21: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Afipia

Agromonas

Blastobacter

Bosea

Bradyrhizobium

Nitrobacter

Oligotropha

Rhodoblastus

Rhodopseudomonas

Brucellaceae

Brucella

Mycoplana

Ochrobactrum

Hyphomicrobiaceae

Ancalomicrobium

Ancylobacter

Angulomicrobium

Aquabacter

Azorhizobium

Blastochloris

Devosia

Dichotomicrobium

Filomicrobium

Gemmiger

Hyphomicrobium

Labrys

Methylorhabdus

Pedomicrobium

Prosthecomicrobium

Rhodomicrobium

Rhodoplanes

Seliberia

Starkeya

Xanthobacter

Methylobacteriaceae

Methylobacterium

Methylocystaceae

Albibacter

Methylocystis

Methylosinus

incertae SedisIV.Methylopila

Phyllobacteriaceae

Aminobacter

Aquamicrobium

Defluvibacter

Liberibacter

Mesorhizobium

Phyllobacterium

Pseudaminobacter

Rhizobiaceae

Agrobacterium

Allorhizobium

Carbophilus

Chelatobacter

Ensifer

Rhizobium

Page 22: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Sinorhizobium

Rhodobiaceae

Rhodobium

Rhodobacterales

Rhodobacteraceae

Ahrensia

Amaricoccus

Antarctobacter

Gemmobacter

Hirschia

Hyphomonas

Ketogulonicigenium

Maricaulis

Methylarcula

Octadecabacter

Paracoccus

Rhodobaca

Rhodobacter

Rhodovulum

Roseibium

Roseinatronobacter

Roseivivax

Roseobacter

Roseovarius

Rubrimonas

Ruegeria

Sagittula

Staleya

Stappia

Sulfitobacter

incertae SedisXXVI.Rhodothalassium

Rhodospirillales

Acetobacteraceae

Acetobacter

Acidiphilium

Acidisphaera

Acidocella

Acidomonas

Asaia

Craurococcus

Gluconacetobacter

Gluconobacter

Paracraurococcus

Rhodopila

Roseococcus

Roseomonas

Stella

Zavarzinia

Rhodospirillaceae

Azospirillum

Levispirillum

Magnetospirillum

Phaeospirillum

Rhodocista

Rhodospira

Page 23: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Rhodospirillum

Rhodovibrio

Roseospira

Roseospirillum

Skermanella

incertae SedisXII.‘‘Sporospirillum’’

Rickettsiales

Anaplasmataceae

Anaplasma

Ehrlichia

Neorickettsia

Wolbachia

incertae SedisV.Aegyptianella

Holosporaceae

Holospora

incertae Sedis II. Caedibacter

incertae Sedis III.Lyticum

incertae Sedis IV. Odyssella

Incertae SedisV.Candidatus Paracaedibacter

incertae Sedis VI. Pseudocaedibacter

incertae Sedis VII. ‘‘Pseudolyticum’’

incertae Sedis VIII. Tectibacter

Rickettsiaceae

Orientia

Rickettsia

Sphingomonadales

Sphingomonadaceae

Blastomonas

Citromicrobium

Erythrobacter

Erythromicrobium

Erythromonas

Porphyrobacter

Sandaracinobacter

Sphingomonas

Zymomonas

Betaproteobacteria

Burkholderiales

Alcaligenaceae

Achromobacter

Alcaligenes

Bordetella

Derxia

Oligella

Pelistega

Pigmentiphaga

Sutterella

Taylorella

Burkholderiaceae

Burkholderia

Page 24: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Cupriavidus

Lautropia

Pandoraea

Paucimonas

Polynucleobacter

Ralstonia

Thermothrix

Comamonadaceae

Acidovorax

Brachymonas

Comamonas

Delftia

Hydrogenophaga

Lampropedia

Macromonas

Polaromonas

Rhodoferax

Variovorax

incertae SedisI. Aquabacterium

incertae SedisII. Ideonella

incertae SedisIII. Leptothrix

incertae SedisIV. Roseateles

incertae SedisV. Rubrivivax

incertae SedisVI. Sphaerotilus

incertae SedisVII.Tepidimonas

incertae SedisVIII. Thiomonas

incertae SedisIX. Xylophilus

Oxalobacteraceae

Duganella

Herbaspirillum

Janthinobacterium

Massilia

Oxalobacter

Telluria

Hydrogenophilales

Hydrogenophilaceae

Hydrogenophilus

Thiobacillus

Methylophilales

Methylophilaceae

Methylobacillus

Methylophilus

Methylovorus

Neisseriales

Neisseriaceae

Alysiella

Aquaspirillum

Chromobacterium

Eikenella

Formivibrio

Iodobacter

Page 25: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Kingella

Microvirgula

Neisseria

Prolinoborus

Simonsiella

Vitreoscilla

Vogesella

incertae Sedis XIV.Catenococcus

incertae Sedis XV.Morococcus

Nitrosomonadales

Gallionellaceae

Gallionella

Nitrosomonadaceae

Nitrosolobus

Nitrosomonas

Nitrosospira

Nitrosovibrio

Spirillaceae

Spirillum

Rhodocyclales

Rhodocyclaceae

Azoarcus

Azonexus

Azospira

Azovibrio

Dechloromonas

Dechlorosoma

Ferribacterium

Propionibacter

Propionivibrio

Rhodocyclus

Thauera

Zoogloea

Deltaproteobacteria

Bdellovibrionales

Bdellovibrionaceae

Bacteriovorax

Bdellovibrio

Micavibrio

Vampirovibrio

Desulfarcales

Desulfarculaceae

Desulfarculus

Desulfobacterales

Desulfobacteraceae

Desulfobacter

Desulfobacterium

Desulfobacula

Desulfobotulus

Desulfocella

Desulfococcus

Desulfofaba

Desulfofrigus

Desulfonema

Desulfosarcina

Page 26: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Desulfospira

Desulfotignum

Desulfobulbaceae

Desulfobulbus

Desulfocapsa

Desulfofustis

Desulforhopalus

Desulfotalea

Nitrospinaceae

Nitrospina

Desulfovibrionales

Desulfohalobiaceae

Desulfohalobium

Desulfonatronovibrio

Desulfothermus

Desulfomicrobiaceae

Desulfomicrobium

Desulfonatronumaceae

Desulfonatronum

Desulfovibrionaceae

Bilophila

Desulfovibrio

Lawsonia

Desulfurellales

Desulfurellaceae

Desulfurella

Hippea

Desulfuromonales

Desulfuromonaceae

Desulfuromonas

Desulfuromusa

Malonomonas

Pelobacter

Geobacteraceae

Geobacter

Trichlorobacter

Myxococcales

Cystobacteraceae

Archangium

Cystobacter

Hyalangium

Melittangium

Stigmatella

Kofleriaceae

Kofleria

Myxococcaceae

Chondromyces

Corallococcus

Myxococcus

Pyxicoccus

Nannocystaceae

Nannocystis

Polyangiaceae

Byssophaga

Haploangium

Jahnia

Page 27: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Polyangium

Sorangium

Syntrophobacterales

Syntrophaceae

Desulfobacca

Desulfomonile

Smithella

Syntrophus

Syntrophobacteraceae

Desulfacinum

Desulforhabdus

Desulfovirga

Syntrophobacter

Thermodesulforhabdus

Epsilonproteobacteria

Campylobacterales

Campylobacteraceae

Arcobacter

Campylobacter

Sulfurospirillum

Helicobacteraceae

Helicobacter

Thiovulum

Wolinella

Gammaproteobacteria

Acidithiobacillales

Acidithiobacillaceae

Acidithiobacillus

Thermithiobacillaceae

Thermithiobacillus

Aeromonadales

Aeromonadaceae

Aeromonas

Oceanimonas

Incertae SedisTolumonas

Succinivibrionaceae

Anaerobiospirillum

Ruminobacter

Succinimonas

Succinivibrio

Alteromonadales

Alteromonadaceae

Alishewanella

Alteromonas

Colwellia

Ferrimonas

Glaciecola

Idiomarina

Marinobacter

Marinobacterium

Microbulbifer

Moritella

Pseudoalteromonas

Psychromonas

Shewanella

Page 28: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Cardiobacteriales

Cardiobacteriaceae

Cardiobacterium

Dichelobacter

Suttonella

Chromatiales

Chromatiaceae

Allochromatium

Chromatium

Halochromatium

Isochromatium

Lamprobacter

Lamprocystis

Marichromatium

Nitrosococcus

Pfennigia

Rhabdochromatium

Thermochromatium

Thioalkalicoccus

Thiocapsa

Thiococcus

Thiocystis

Thiodictyon

Thioflavicoccus

Thiohalocapsa

Thiolamprovum

Thiopedia

Thiorhodococcus

Thiorhodovibrio

Thiospirillum

Ectothiorhodospiraceae

Arhodomonas

Ectothiorhodospira

Halorhodospira

Nitrococcus

Thioalkalivibrio

Thiorhodospira

Halothiobacillaceae

Halothiobacillus

Enterobacteriales

Enterobacteriaceae

Alterococcus

Arsenophonus

Brenneria

Buchnera

Budvicia

Buttiauxella

Calymmatobacterium

CandidatusPhlomobacter

Cedecea

Citrobacter

Edwardsiella

Enterobacter

Erwinia

Escherichia

Ewingella

Page 29: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Hafnia

Klebsiella

Kluyvera

Leclercia

Leminorella

Moellerella

Morganella

Obesumbacterium

Pantoea

Pectobacterium

Photorhabdus

Plesiomonas

Pragia

Proteus

Providencia

Rahnella

Saccharobacter

Salmonella

Serratia

Shigella

Sodalis

Tatumella

Trabulsiella

Wigglesworthia

Xenorhabdus

Yersinia

Yokenella

Legionellales

Coxiellaceae

Coxiella

Rickettsiella

Legionellaceae

Legionella

Methylococcales

Methylococcaceae

Methylobacter

Methylocaldum

Methylococcus

Methylomicrobium

Methylomonas

Methylosarcina

Methylosphaera

Oceanospirillales

Alcanivoraceae

Alcanivorax

Hahellaceae

Hahella

Halomonadaceae

Carnimonas

Chromohalobacter

Halomonas

Zymobacter

Oceanospirillaceae

Balneatrix

Marinomonas

Marinospirillum

Page 30: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Neptunomonas

Oceanospirillum

Pasteurellales

Pasteurellaceae

Actinobacillus

Haemophilus

Lonepinella

Mannheimia

Pasteurella

Phocoenobacter

Pseudomonadales

Moraxellaceae

Acinetobacter

Moraxella

Psychrobacter

Pseudomonadaceae

Azomonas

Azotobacter

Cellvibrio

Mesophilobacter

Pseudomonas

Rhizobacter

Rugamonas

Serpens

incertae Sedis

Enhydrobacter

Thiotrichales

Francisellaceae

Francisella

Piscirickettsiaceae

Cycloclasticus

Hydrogenovibrio

Methylophaga

Piscirickettsia

Thioalkalimicrobium

Thiomicrospira

Thiotrichaceae

Achromatium

Beggiatoa

Leucothrix

Thiobacterium

Thiomargarita

Thioploca

Thiospira

Thiothrix

Vibrionales

Vibrionaceae

Photobacterium

Salinivibrio

Vibrio

Xanthomonadales

Xanthomonadaceae

Frateuria

Luteimonas

Lysobacter

Nevskia

Page 31: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Pseudoxanthomonas

Rhodanobacter

Schineria

Stenotrophomonas

Thermomonas

Xanthomonas

Xylella

Spirochaetes

Spirochaetia

Spirochaetales

Brachyspiraceae

Brachyspira

Brevinemataceae

Brevinema

Leptospiraceae

Leptonema

Leptospira

Turneriella

Spirochaetaceae

Borrelia

Cristispira

Spirochaeta

Treponema

Hindgut spirochetes of termites and Cryptocercus punctulatus

Synergistetes

Synergistia

Synergistales

Synergistaceae

Synergistes

Incertae Sedis

Aminomonas

Thermanaerovibrio

Incertae Sedis

Aminobacterium

Anaerobaculum

Dethiosulfovibrio

Tenericutes

Mollicutes

Acholeplasmatales

Acholeplasmataceae

Acholeplasma

incertae Sedis

“CandidatusPhytoplasma”

Anaeroplasmatales

Anaeroplasmataceae

Anaeroplasma

Asteroleplasma

Entomoplasmatales

Entomoplasmataceae

Entomoplasma

Mesoplasma

Spiroplasmataceae

Spiroplasma

Mycoplasmatales

Mycoplasmataceae

Mycoplasma

Page 32: Taxonomic Outline - Bergey's · Taxonomic Outline Phylum Class Order Family Genus Acidobacteria Acidobacteriia ... Form-Spirulina Form-Starria Form-Symploca Form-Trichodesmium Form-Tychonema

Phylum Class Order Family Genus

Ureaplasma

incertae Sedis

Eperythrozoon

Haemobartonella

Thermodesulfobacteria

Thermodesulfobacteria

Thermodesulfobacteriales

Thermodesulfobacteriaceae

Thermodesulfobacterium

Thermomicrobia

Thermomicrobia

Thermomicrobiales

Thermomicrobiaceae

Thermomicrobium

Thermotogae

Thermotogae

Thermotogales

Thermotogaceae

Fervidobacterium

Geotoga

Petrotoga

Thermosipho

Thermotoga

Verrucomicrobia

Opitutae

Opitutales

Opitutaceae

Alterococcus

Opitutus

Puniceicoccales

Puniceicoccaceae

Cerasicoccus

Coraliomargarita

Pelagicoccus

Puniceicoccus

Spartobacteria

Chthoniobacterales

Chthoniobacteraceae

“Candidatus Xiphinematobacter”

Chthoniobacter

Verrucomicrobiae

Verrucomicrobiales

Akkermansiaceae

Akkermansia

Rubritaleaceae

Rubritalea

Verrucomicrobiaceae

Prosthecobacter

Verrucomicrobium