subject index

Journal of Biosciences

Volume 38 2013

SUBJECT INDEX

16S rRNA genes sequencingIdentification of bifidobacteria isolated from Asianelephant (Elephas maximus) 239

18th centuryNatural history in India during the 18th and 19thcenturies 201

19th centuryNatural history in India during the 18th and 19thcenturies 201

ABCA1ABCA1 C69T gene polymorphism and risk of type 2diabetes mellitus in a Saudi population 893

Abp1Inactivation of Tor proteins affects the dynamicsof endocytic proteins in early stage of endocytosis 351

ActinobacteriaEffect of salt stress on the physiology of Frankiasp strain CcI6 699What stories can the Frankia genomes start to tell us? 719

ActinorhizalIndigenous actinorhizal plants of Australia 749

Actinorhizal plantCharacterization of haemoglobin from Actinorhizalplants – An in silico approach 777

Actinorhizal plantsA brief history of Frankia and actinorhizalplants meetings 677Growth and N2 fixation in an Alnus hirsuta (Turcz.)var. sibirica stand in Japan 761Evaluation of phytochemical constituentsand antioxidant activity of selected actinorhizalfruits growing in the forests of Northeast India 797In silico–based combinatorial pharmacophoremodelling and docking studies of GSK-3β and GKinhibitors of Hippophae 805

Actinorhizal symbiosisEffect of salt stress on the physiology of Frankiasp strain CcI6 699What stories can the Frankia genomes start to tell us? 719

Actinorhizal symbiosisCasuarina glauca: A model tree for basic researchin actinorhizal symbiosis 815

Activity and complementationMolecular flexibility of Mycobacterium tuberculosisribosome recycling factor and its functionalconsequences: An exploration involving mutants 845

AdaptationDietary diversification and variations in the numberof labrum sensilla in grasshoppers: Which came first? 339

Adhesionα2,6 Sialylation associated with increasedβ1,6-branched N-oligosaccharides influences cellularadhesion and invasion 867

AdipocytesAccelerated fat cell aging links oxidative stressand insulin resistance in adipocytes 113

ADMETIn silico–based combinatorial pharmacophoremodelling and docking studies of GSK-3βand GK inhibitors of Hippophae 805

AdrenomedullinShort-term hypoxia/reoxygenation activatesthe angiogenic pathway in rat caudate putamen 363

AgamidInfluence of gaze and directness of approach on theescape responses of the Indian rock lizard,Psammophilus dorsalis (Gray, 1831) 829

AgarosePotential of Raloxifene in reversing osteoarthritis-likealterations in rat chondrocytes: An in vitro model study 135

AgingThe multiple faces of calcineurin signalingin Caenorhabditis elegans: Development,behaviour and aging 417Stem cell function and maintenance – ends that matter:Role of telomeres and telomerase 641

AlcoholismAssessment of lexical semantic judgment abilitiesin alcohol-dependent subjects: An fMRI study 905

AlgorithmAn algorithm to find all palindromic sequencesin proteins 173

AllometryAllometric scaling relationship between frequencyof intestinal contraction and body size in rodentsand rabbits 391

AlnusMicromonospora is a normal occupant of actinorhizalnodules 685

AmitrazEvaluation of the DNA damaging effects of amitrazon human lymphocytes in the Comet assay 53

Amplicon restriction patternAmplicon restriction patterns associatedwith nitrogenase activity of root nodules for selectionof superior Myrica seedlings 789

AmylaseRole of amylase, mucin, IgA and albumin on salivaryprotein buffering capacity: A pilot study 259

AnabolismMetabolism in bacteria at low temperature:A recent report 409

AngiogenesisShort-term hypoxia/reoxygenation activatesthe angiogenic pathway in rat caudate putamen 363

Anopheles stephensiTranscriptome analysis of Anopheles stephensiembryo using expressed sequence tags 301

AnthocyaninFunctional analyses of a flavonol synthase–likegene from Camellia nitidissima reveal its rolesin flavonoid metabolism during floral pigmentation 593

J. Biosci. 38(5), December 2013, 989–1001 * Indian Academy of Sciences 989http://www.ias.ac.in/jbiosci

Anti-predator behaviourInfluence of gaze and directness of approachon the escape responses of the Indian rock lizard,Psammophilus dorsalis (Gray, 1831) 829

Anti-repressorSpo0A positively regulates epr expression by negatingthe repressive effect of co-repressors, SinR and ScoC,in Bacillus subtilis 291

Antioxidant statusAltered DNA repair, oxidative stress and antioxidantstatus in coronary artery disease 385

AntioxidantsEvaluation of phytochemical constituentsand antioxidant activity of selected actinorhizalfruits growing in the forests of Northeast India 797

AnxietyRepeated oral administration of capsaicin increasesanxiety-like behaviours with prolongedstress response in rats 561

ApoptosisEvaluation of the DNA damaging effects of amitrazon human lymphocytes in the Comet assay 53Region-specific vulnerability to endoplasmicreticulum stress-induced neuronal death in rat brainafter status epilepticus 877

Arabidopsis thalianaChanges in leaf proteome profile of Arabidopsisthaliana in response to salicylic acid 317

ars operonBioluminescent bioreporter for assessment of arseniccontamination in water samples of India 251

ArsenicBioluminescent bioreporter for assessment of arseniccontamination in water samples of India 251

ATP synthase β subunitWhite Spot Syndrome Virus infectionin Penaeus monodon is facilitatedby housekeeping molecules 917

Auditory pathwayRole of sound stimulation in reprogrammingbrain connectivity 605

Autism Spectrum DisorderMaternal hormonal interventions as a risk factorfor Autism Spectrum Disorder: An epidemiologicalassessment from India 887

AvianRole of sound stimulation in reprogrammingbrain connectivity 605

BacteriaMetabolism in bacteria at low temperature:A recent report 409

Bacterial conjugationWhat history tells us XXXI. The replicon model:Between molecular biology and molecularcell biology 225

Bacterial identificationDevelopment of rapid phenotypic systemfor the identification of Gram-negative oxidase-positivebacilli in resource-limited settings 329

Bacterial sensorBioluminescent bioreporter for assessmentof arsenic contamination in water samplesof India 251

Bacterial wiltA unique DNA repair and recombination gene (recN)sequence for identification and intraspecific moleculartyping of bacterial wilt pathogen Ralstoniasolanacearum and its comparative analysiswith ribosomal DNA sequences 267

Basic electrical rhythmAllometric scaling relationship between frequencyof intestinal contraction and body size in rodentsand rabbits 391

BehaviourThe multiple faces of calcineurin signalingin Caenorhabditis elegans: Development,behaviour and aging 417

BifidobacteriaIdentification of bifidobacteria isolated from Asianelephant (Elephas maximus) 239

Binding site predictionEffect of zinc and calcium ions on the rat kidneymembrane-bound form of dipeptidyl peptidase IV 461

Biochemical parametersPhysiological responses to acute experimental hypoxiain the air-breathing Indian catfish, Clarias batrachus(Linnaeus, 1758) 373

BiofilmRhamnolipid but not motility is associatedwith the initiation of biofilm seeding dispersalof Pseudomonas aeruginosa strain PA17 149Influence of clove oil on certain quorum-sensing-regulated functions and biofilm of Pseudomonasaeruginosa and Aeromonas hydrophila 835

BioluminescenceBioluminescent bioreporter for assessment of arseniccontamination in water samples of India 251

BiomineralBiomineralization: Some complex crystallite-orientedskeletal structures 925

Biomphalaria alexandrinaBiomphalaria alexandrina in Egypt: Past, presentand future 665

BioreporterBioluminescent bioreporter for assessmentof arsenic contamination in water samples of India 251

BiovarA unique DNA repair and recombination gene (recN)sequence for identification and intraspecific moleculartyping of bacterial wilt pathogen Ralstoniasolanacearum and its comparative analysiswith ribosomal DNA sequences 267

Bis-indole maleimideSide-effects of protein kinase inhibitors on ion channels 937

Blunt endIdentification of a premature terminationof DNA polymerization in vitro by Klenowfragment mutants 279

Body massAllometric scaling relationship between frequencyof intestinal contraction and body size in rodentsand rabbits 391

BrainRole of sound stimulation in reprogrammingbrain connectivity 605Assessment of lexical semantic judgment abilitiesin alcohol-dependent subjects: An fMRI study 905

Buffering capacityRole of amylase, mucin, IgA and albumin on salivaryprotein buffering capacity: A pilot study 259

C. elegansInfluence of clove oil on certain quorum-sensing-regulated functions and biofilm of Pseudomonasaeruginosa and Aeromonas hydrophila 835

Caenorhabditis elegansThe multiple faces of calcineurin signalingin Caenorhabditis elegans: Development,behaviour and aging 417

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J. Biosci. 38(5), December 2013

CalcineurinThe multiple faces of calcineurin signalingin Caenorhabditis elegans: Development,behaviour and aging 417

Calcium channelsSide-effects of protein kinase inhibitorson ion channels 937

CamelliaFunctional analyses of a flavonol synthase–likegene from Camellia nitidissima reveal its rolesin flavonoid metabolism during floralpigmentation 593

CancerEffect of zinc and calcium ions on the rat kidneymembrane-bound form of dipeptidyl peptidase IV 461

Cancer cellRegulation of DU145 prostate cancer cell growthby Scm-like with four mbt domains 2 105

Candidatus LiberibacterCandidate gene markers for Candidatus Liberibacterasiaticus for detecting citrus greening disease 229

CartilagePotential of Raloxifene in reversing osteoarthritis-likealterations in rat chondrocytes: An in vitromodel study 135

Casuarina equisetifolia rooted stem cuttingsGrowth response of Casuarina equisetifolia Forst.rooted stem cuttings to Frankia in nurseryand field conditions 741

Casuarina glaucaCasuarina glauca: A model tree for basic researchin actinorhizal symbiosis 815

CasuarinasIndigenous actinorhizal plants of Australia 749

CatabolismMetabolism in bacteria at low temperature:A recent report 409

CatalaseEvaluation of the DNA damaging effects of amitrazon human lymphocytes in the Comet assay 53

Cbc1pmRNA quality control pathways in Saccharomycescerevisiae 615

cDNA libraryTranscriptome analysis of Anopheles stephensiembryo using expressed sequence tags 301

Cell divisionParA encoded on chromosome II of Deinococcusradiodurans binds to nucleoid and inhibits celldivision in Escherichia coli 487

ChondroprotectivePotential of Raloxifene in reversing osteoarthritis-likealterations in rat chondrocytes: An in vitromodel study 135

CHOPRegion-specific vulnerability to endoplasmicreticulum stress-induced neuronal death in rat brainafter status epilepticus 877

Cirrhinus mrigalaNOD1 and NOD2 receptors in mrigal(Cirrhinus mrigala): Inductive expressionand downstream signalling in ligandstimulation and bacterial infections 533

Citrus greeningCandidate gene markers for Candidatus Liberibacterasiaticus for detecting citrus greening disease 229

Clarias batrachusPhysiological responses to acute experimentalhypoxia in the air-breathing Indian catfish,Clarias batrachus (Linnaeus, 1758) 373

Clove oilInfluence of clove oil on certain quorum-sensing-regulated functions and biofilm of Pseudomonasaeruginosa and Aeromonas hydrophila 835

Co-repressorsSpo0A positively regulates epr expressionby negating the repressive effect of co-repressors,SinR and ScoC, in Bacillus subtilis 291

Co-translationA mini-IRES sequence for stringent selectionof high producers 245

Codon usageCodon-optimized antibiotic resistance gene improvesefficiency of transient transformation in Frankia 713

Cold adaptationMetabolism in bacteria at low temperature:A recent report 409

Colonial scienceNatural history in India during the 18thand 19th centuries 201

Comet assayEvaluation of the DNA damaging effects of amitrazon human lymphocytes in the Comet assay 53

Complex quantitative traitsIntegrated genomics and molecular breedingapproaches for dissecting the complex quantitativetraits in crop plants 971

ConflictThere is no common ground between scienceand religion 181

Contractile vacuoleA functional connection of Dictyostelium paracaspasewith the contractile vacuole and a possible partnerof the vacuolar proton ATPase 509

Coriaria myrtifoliaFirst report on the occurrence of the uncultivatedcluster 2 Frankia microsymbionts in soil outsidethe native actinorhizal host range area 695

Coronary artery diseaseAltered DNA repair, oxidative stress and antioxidantstatus in coronary artery disease 385

CottonExcised radicle tips as a source of genomic DNAfor PCR-based genotyping and melting curveanalysis in cotton 167

Cross-amplificationCandidate gene markers for CandidatusLiberibacter asiaticus for detectingcitrus greening disease 229

Crucial traitUV-screening of grasses by plant silica layer? 413

CrustaceaOrigin and occurrence of sexual and matingsystems in Crustacea: A progression towardscommunal living and eusociality 951

cry1AExcised radicle tips as a source of genomic DNAfor PCR-based genotyping and melting curveanalysis in cotton 167

Cultural heritageA simple and reliable methodology to detect eggwhite in art samples 397

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Cy3Fluorescent tag is not a reliable marker for smallRNA transfection in the presence of serum 471

Cymodocea serrulataSeagrasses in tropical Australia, productiveand abundant for decades decimated overnight 157

CytomegalovirusOverlapping transcription structure of humancytomegalovirus UL140 and UL141 genes 35

DecompositionGrowth and N2 fixation in an Alnus hirsuta(Turcz.) var. sibirica stand in Japan 761

DeinococcusParA encoded on chromosome II of Deinococcusradiodurans binds to nucleoid and inhibitscell division in Escherichia coli 487

DepressionRepeated oral administration of capsaicin increasesanxiety-like behaviours with prolonged stressresponsein rats 561

DevelopmentThe multiple faces of calcineurin signalingin Caenorhabditis elegans: Development,behaviour and aging 417Male- and female-specific variants of doublesexgene products have different roles to play towardsregulation of Sex combs reduced expressionand sex comb morphogenesis in Drosophila 455

DiabetesEffect of zinc and calcium ions on the rat kidneymembrane-bound form of dipeptidyl peptidase IV 461

DictyosteliumA functional connection of Dictyostelium paracaspasewith the contractile vacuole and a possible partnerof the vacuolar proton ATPase 509

DietDietary diversification and variations in the numberof labrum sensilla in grasshoppers: Which came first? 339

Differential proteomicsChanges in leaf proteome profile of Arabidopsisthaliana in response to salicylic acid 317

Dipeptidyl peptidase IVEffect of zinc and calcium ions on the rat kidneymembrane-bound form of dipeptidyl peptidase IV 461

Directional asymmetryRhodnius prolixus and Rhodnius robustus–like(Hemiptera, Reduviidae) wing asymmetryunder controlled conditions of populationdensity and feeding frequency 549

Directional cloningRealizing directional cloning using sticky endsproduced by 3′-5′ exonucleaseof Klenow fragment 857

Discovery Studio 3.5In silico–based combinatorial pharmacophoremodelling and docking studies of GSK-3βand GK inhibitors of Hippophae 805

DispersalRhamnolipid but not motility is associatedwith the initiation of biofilm seeding dispersalof Pseudomonas aeruginosa strain PA17 149

Divalent cationsEffect of zinc and calcium ions on the rat kidneymembrane-bound form of dipeptidyl peptidase IV 461

DivergenceFunctional divergence outlines the evolutionof novel protein function in NifH/BchLprotein family 733

DNA damageEvaluation of the DNA damaging effectsof amitraz on human lymphocytesin the Comet assay 53Altered DNA repair, oxidative stress and antioxidantstatus in coronary artery disease 385

DNA markersCandidate gene markers for Candidatus Liberibacterasiaticus for detecting citrus greening disease 229

DNA methylationWhat history tells us XXXII. The long and tortuoushistory of epigenetic marks 451

DNA polymeraseIdentification of a premature terminationof DNA polymerization in vitroby Klenow fragment mutants 279

DNA repair efficiencyAltered DNA repair, oxidative stress and antioxidantstatus in coronary artery disease 385

DNA repair proteinA unique DNA repair and recombination gene (recN)sequence for identification and intraspecific moleculartyping of bacterial wilt pathogen Ralstoniasolanacearum and its comparative analysiswith ribosomal DNA sequences 267

Dot-blot immunoassayA simple and reliable methodology to detect eggwhite in art samples 397

Down-regulationDown-regulation of human cytomegalovirus UL138,a novel latency-associated determinant,by hcmv-miR-UL36 479

DRNmRNA quality control pathwaysin Saccharomyces cerevisiae 615

Drosophila melanogasterMale- and female-specific variants of doublesexgene products have different roles to playtowards regulation of Sex combs reducedexpression and sex comb morphogenesisin Drosophila 455

dsxF

Male- and female-specific variants of doublesexgene products have different roles to play towardsregulation of Sex combs reduced expressionand sex comb morphogenesis in Drosophila 455

dsxM

Male- and female-specific variants of doublesexgene products have different roles to play towardsregulation of Sex combs reduced expressionand sex comb morphogenesis in Drosophila 455

DuplicationsCharacterization of pseudogenes in membersof the order Frankineae 727

Ecological roleA brief history of Frankia and actinorhizalplants meetings 677

Editorial policyOn toxic effects of scientific journals 189

Effector-triggered immunityPlant innate immunity: An updated insightinto defense mechanism 433

EGFPA mini-IRES sequence for stringent selectionof high producers 245

Egg paint binderA simple and reliable methodology to detect eggwhite in art samples 397

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EgyptBiomphalaria alexandrina in Egypt: Past, presentand future 665

ElaeagnusMicromonospora is a normal occupant of actinorhizalnodules 685

Elaeagnus pyriformisEvaluation of phytochemical constituentsand antioxidant activity of selected actinorhizalfruits growing in the forests of Northeast India 797

Elephas maximusIdentification of bifidobacteria isolated from Asianelephant (Elephas maximus) 239

EndocytosisInactivation of Tor proteins affects the dynamicsof endocytic proteins in early stage of endocytosis 351

Endoplasmic reticulum stressRegion-specific vulnerability to endoplasmicreticulum stress-induced neuronal deathin rat brain after status epilepticus 877

Epicotyl dormancyEpicotyl morphophysiological dormancy in seedsof Lilium polyphyllum (Liliaceae) 13

Epigenetic marksWhat history tells us XXXII. The long and tortuoushistory of epigenetic marks 451

EpisomeWhat history tells us XXXI. The replicon model:Between molecular biology and molecularcell biology 225

eprSpo0A positively regulates epr expressionby negating the repressive effect of co-repressors,SinR and ScoC, in Bacillus subtilis 291

ESCRTVps1 in the late endosome-to-vacuole traffic 73

EusocialityOrigin and occurrence of sexual and matingsystems in Crustacea: A progression towardscommunal living and eusociality 951

EvolutionThere is no common ground between scienceand religion 181

ExonucleaseRealizing directional cloning using sticky endsproduced by 3′-5′ exonuclease of Klenow fragment 857

ExosomemRNA quality control pathwaysin Saccharomyces cerevisiae 615

Fatty acid acylationFatty acyl chain-dependent but charge-independentassociation of the SH4 domain of Lckwith lipid membranes 63

fimAA low-pH medium in vitro or the environmentwithin a macrophage decreases the transcriptionallevels of fimA, fimZ and lrp in Salmonellaenterica serovar Typhimurium 499

fimZA low-pH medium in vitro or the environmentwithin a macrophage decreases the transcriptionallevels of fimA, fimZ and lrp in Salmonellaenterica serovar Typhimurium 499

Firefly lightModulations in the light of the firefly 9

FlavonoidFunctional analyses of a flavonol synthase–likegene from Camellia nitidissima reveal its rolesin flavonoid metabolism during floral pigmentation 593

FlavonolFunctional analyses of a flavonol synthase–likegene from Camellia nitidissima reveal its rolesin flavonoid metabolism during floral pigmentation 593

Flavonol synthaseFunctional analyses of a flavonol synthase–likegene from Camellia nitidissima reveal its rolesin flavonoid metabolism during floral pigmentation 593

Fluctuating asymmetryRhodnius prolixus and Rhodnius robustus–like(Hemiptera, Reduviidae) wing asymmetryunder controlled conditions of populationdensity and feeding frequency 549

Fluid mosaic modelWhat history tells us XXX. The emergenceof the fluid mosaic model of membranes 3

Fluid percussion injuryEffect of normabaric hyperoxia treatment on neuronaldamage following fluid percussion injuryin the striatum of mice: A morphological approach 93

FM4-64Vps1 in the late endosome-to-vacuole traffic 73

fMRIAssessment of lexical semantic judgment abilitiesin alcohol-dependent subjects: An fMRI study 905

FrankiaA brief history of Frankia and actinorhizal plants meetings 677Micromonospora is a normal occupant of actinorhizalnodules 685First report on the occurrence of the uncultivatedcluster 2 Frankia microsymbionts in soil outsidethe native actinorhizal host range area 695Codon-optimized antibiotic resistance gene improvesefficiency of transient transformation in Frankia 713Characterization of pseudogenes in membersof the order Frankineae 727Growth and N2 fixation in an Alnus hirsuta(Turcz.) var. sibirica stand in Japan 761Growth response of Casuarina equisetifolia Forst.rooted stem cuttings to Frankia in nurseryand field conditions 741Indigenous actinorhizal plants of Australia 749Structural and gene expression analysesof uptake hydrogenases and other proteinsinvolved in nitrogenase protection in Frankia 703Casuarina glauca: A model tree for basic researchin actinorhizal symbiosis 815

Freeze-etching electron microscopyWhat history tells us XXX. The emergenceof the fluid mosaic model of membranes 3

GazeInfluence of gaze and directness of approachon the escape responses of the Indian rock lizard,Psammophilus dorsalis (Gray, 1831) 829

Genome segregationParA encoded on chromosome II of Deinococcusradiodurans binds to nucleoid and inhibitscell division in Escherichia coli 487

GenomesEffect of salt stress on the physiology of Frankiasp strain CcI6 699What stories can the Frankia genomes start to tell us? 719

Genomic DNA isolationExcised radicle tips as a source of genomicDNA for PCR-based genotyping and meltingcurve analysis in cotton 167

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GenomicsIntegrated genomics and molecular breedingapproaches for dissecting the complex quantitativetraits in crop plants 971

Gentamicin resistance geneCodon-optimized antibiotic resistance gene improvesefficiency of transient transformation in Frankia 713

Geometric morphometricsRhodnius prolixus and Rhodnius robustus–like(Hemiptera, Reduviidae) wing asymmetryunder controlled conditions of populationdensity and feeding frequency 549

Germ band retractionTranscriptome analysis of Anopheles stephensiembryo using expressed sequence tags 301

Gram-negativeDevelopment of rapid phenotypic systemfor the identification of Gram-negative oxidase-positivebacilli in resource-limited settings 329

GrasshopperDietary diversification and variations in the numberof labrum sensilla in grasshoppers: Which came first? 339

GRP78Region-specific vulnerability to endoplasmic reticulumstress-induced neuronal death in rat brain afterstatus epilepticus 877

Habitat changeRhodnius prolixus and Rhodnius robustus–like(Hemiptera, Reduviidae) wing asymmetry undercontrolled conditions of population densityand feeding frequency 549

HaemoglobinStructural and gene expression analyses of uptakehydrogenases and other proteins involvedin nitrogenase protection in Frankia 703

Haemoglobin (Hb)Characterization of haemoglobin from Actinorhizalplants – An in silico approach 777

HCMVDown-regulation of human cytomegalovirus UL138,a novel latency-associated determinant,by hcmv-miR-UL36 479

Hcmv-miR-UL36Down-regulation of human cytomegalovirus UL138,a novel latency-associated determinant,by hcmv-miR-UL36 479

Hematological analysisPhysiological responses to acute experimentalhypoxia in the air-breathing Indian catfish,Clarias batrachus (Linnaeus, 1758) 373

HerbivoresIdentification of bifidobacteria isolated from Asianelephant (Elephas maximus) 239

HermaphroditismOrigin and occurrence of sexual and matingsystems in Crustacea: A progression towardscommunal living and eusociality 951

HeterochromatinWhat history tells us XXXII. The long and tortuoushistory of epigenetic marks 451

HeterokaryonsWhat history tells us XXX. The emergenceof the fluid mosaic model of membranes 3

High-resolution melting curve analysisExcised radicle tips as a source of genomic DNAfor PCR-based genotyping and melting curveanalysis in cotton 167

HippocampusEarly repeated maternal separation induces alterationsof hippocampus reelin expression in rats 27

HippophaeMicromonospora is a normal occupant of actinorhizalnodules 685In silico–based combinatorial pharmacophoremodelling and docking studies of GSK-3βand GK inhibitors of Hippophae 805

Hippophae salicifoliaEvaluation of phytochemical constituentsand antioxidant activity of selected actinorhizalfruits growing in the forests of Northeast India 797

Histone methylationRegulation of DU145 prostate cancer cell growthby Scm-like with four mbt domains 2 105

Histone modificationsWhat history tells us XXXII. The long and tortuoushistory of epigenetic marks 451

HistonesAn algorithm to find all palindromic sequencesin proteins 173

HomocysteineLower incidence of nonsyndromic cleft lip withor without cleft palate in females:Is homocysteine a factor? 21

Homology modellingCharacterization of haemoglobin from Actinorhizalplants – An in silico approach 777

HopanoidsStructural and gene expression analyses of uptakehydrogenases and other proteins involvedin nitrogenase protection in Frankia 703

HOPSVps1 in the late endosome-to-vacuole traffic 73

Hormonal interventionsMaternal hormonal interventions as a risk factorfor Autism Spectrum Disorder: An epidemiologicalassessment from India 887

HOXB13 gene expressionRegulation of DU145 prostate cancer cell growthby Scm-like with four mbt domains 2 105

HSP70White Spot Syndrome Virus infection in Penaeusmonodon is facilitated by housekeeping molecules 917

HumanCellular ontogeny of RBMY during humanspermatogenesis and its role in sperm motility 85

Human carotid plaqueIdentification of two genes potentially associatedin iron-heme homeostasis in human carotidplaque using microarray analysis 311

HydrogenaseStructural and gene expression analysesof uptake hydrogenases and other proteinsinvolved in nitrogenase protectionin Frankia 703

HyperhomocysteinemiaLower incidence of nonsyndromic cleft lipwith or without cleft palate in females:Is homocysteine a factor? 21

HyphaeStructural and gene expression analysesof uptake hydrogenases and other proteinsinvolved in nitrogenase protectionin Frankia 703

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Hypothalamic-pituitary-adrenal axisRepeated oral administration of capsaicinincreases anxiety-like behaviours with prolongedstressresponse in rats 561

HypoxiaShort-term hypoxia/reoxygenation activatesthe angiogenic pathway in rat caudate putamen 363Physiological responses to acute experimentalhypoxia in the air-breathing Indian catfish,Clarias batrachus (Linnaeus, 1758) 373

Hypoxia-inducible factorShort-term hypoxia/reoxygenation activatesthe angiogenic pathway in rat caudate putamen 363

IdentificationIdentification of bifidobacteria isolatedfrom Asian elephant (Elephas maximus) 239

ImmunofluorescenceWhat history tells us XXX. The emergenceof the fluid mosaic model of membranes 3

Impact factorsOn toxic effects of scientific journals 189

In vitro modelsPotential of Raloxifene in reversing osteoarthritis-likealterations in rat chondrocytes: An in vitro model study 135

In vitro mutagen sensitivity analysisAltered DNA repair, oxidative stressand antioxidant status in coronary artery disease 385

IndiaNatural history in India during the 18th and 19thcenturies 201Maternal hormonal interventions as a risk factorfor Autism Spectrum Disorder: An epidemiologicalassessment from India 887

Indian populationLower incidence of nonsyndromic cleft lipwith or without cleft palate in females:Is homocysteine a factor? 21

Induced pluripotent stem cells (iPSCs)Derivation, characterization and retinaldifferentiation of induced pluripotentstem cells 123

InfertilityMaternal hormonal interventions as a risk factorfor Autism Spectrum Disorder: An epidemiologicalassessment from India 887

InhibitionEffect of zinc and calcium ions on the rat kidneymembrane-bound form of dipeptidyl peptidase IV 461

Innate immunityNOD1 and NOD2 receptors in mrigal(Cirrhinus mrigala): Inductive expressionand downstream signalling in ligandstimulation and bacterial infections 533

Insulin resistanceAccelerated fat cell aging links oxidativestress and insulin resistancein adipocytes 113

Intestinal contractionsAllometric scaling relationship between frequencyof intestinal contraction and body sizein rodents and rabbits 391

Invasionα2,6 Sialylation associated with increasedβ1,6-branched N-oligosaccharides influencescellular adhesion and invasion 867

IRESA mini-IRES sequence for stringent selectionof high producers 245

Iron-heme homeostasisIdentification of two genes potentially associatedin iron-heme homeostasis in human carotid plaqueusing microarray analysis 311

IsolationA brief history of Frankia and actinorhizal plantsmeetings 677

Ka/KsSignatures of positive selection in LY96 genein vertebrates 899

Klenow fragmentRealizing directional cloning using sticky endsproduced by 3′-5′ exonuclease of Klenow fragment 857

Klenow fragmentIdentification of a premature termination of DNApolymerization in vitro by Klenow fragment mutants 279

Labrum sensillaDietary diversification and variations in the numberof labrum sensilla in grasshoppers: Which came first? 339

Language processingAssessment of lexical semantic judgment abilitiesin alcohol-dependent subjects: An fMRI study 905

Late endosomeVps1 in the late endosome-to-vacuole traffic 73

LexicalAssessment of lexical semantic judgment abilitiesin alcohol-dependent subjects: An fMRI study 905

LiliaceaeEpicotyl morphophysiological dormancyin seeds of Lilium polyphyllum (Liliaceae) 13

Lilium polyphyllumEpicotyl morphophysiological dormancyin seeds of Lilium polyphyllum (Liliaceae) 13

Lipid bilayerWhat history tells us XXX. The emergenceof the fluid mosaic model of membranes 3

LitterfallGrowth and N2 fixation in an Alnus hirsuta(Turcz.) var. sibirica stand in Japan 761

Low pHA low-pH medium in vitro or the environmentwithin a macrophage decreases the transcriptionallevels of fimA, fimZ and lrp in Salmonellaenterica serovar Typhimurium 499

lrpA low-pH medium in vitro or the environmentwithin a macrophage decreases the transcriptionallevels of fimA, fimZ and lrp in Salmonellaenterica serovar Typhimurium 499

LY96Signatures of positive selection in LY96 genein vertebrates 899

MacrophageA low-pH medium in vitro or the environmentwithin a macrophage decreases the transcriptionallevels of fimA, fimZ and lrp in Salmonellaenterica serovar Typhimurium 499

Marker-freeProduction of marker-free and RSV-resistanttransgenic rice using a twin T-DNA systemand RNAi 573

Mate guardingOrigin and occurrence of sexual and mating systemsin Crustacea: A progression towards communalliving and eusociality 951

Maternal separationEarly repeated maternal separation inducesalterations of hippocampus reelin expressionin rats 27

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Mean break per cell (b/c) valuesAltered DNA repair, oxidative stress and antioxidantstatus in coronary artery disease 385

MeetingsA brief history of Frankia and actinorhizal plantsmeetings 677

MembraneWhat history tells us XXXI. The replicon model:Between molecular biology and molecularcell biology 225

Membrane associationFatty acyl chain-dependent but charge-independentassociation of the SH4 domain of Lckwith lipid membranes 63

Metabolic ratePhysiological responses to acute experimentalhypoxia in the air-breathing Indian catfish,Clarias batrachus (Linnaeus, 1758) 373

MetalloenzymeFunctional divergence outlines the evolutionof novel protein function in NifH/BchLprotein family 733

MicroarrayIdentification of two genes potentially associatedin iron-heme homeostasis in human carotidplaque using microarray analysis 311

Microbial-associated molecular-patterns-triggeredimmunity

Plant innate immunity: An updated insightinto defense mechanism 433

MicromonosporaMicromonospora is a normal occupant of actinorhizalnodules 685

MicroRNAMiR-200a enhances the migrations of A549and SK-MES-1 cells by regulatingthe expression of TSPAN1 523

MigrationMiR-200a enhances the migrations of A549and SK-MES-1 cells by regulatingthe expression of TSPAN1 523

miR-200aMiR-200a enhances the migrations of A549 and SK-MES-1cells by regulating the expression of TSPAN1 523

Model membranesFatty acyl chain-dependent but charge-independentassociation of the SH4 domain of Lckwith lipid membranes 63

Molecular breedingIntegrated genomics and molecular breedingapproaches for dissecting the complexquantitative traits in crop plants 971

Molecular librationMolecular flexibility of Mycobacterium tuberculosisribosome recycling factor and its functionalconsequences: An exploration involving mutants 845

Molecular markersAmplicon restriction patterns associatedwith nitrogenase activity of root nodulesfor selection of superior Myrica seedlings 789

MonogamyOrigin and occurrence of sexual and matingsystems in Crustacea: A progression towardscommunal living and eusociality 951

MosquitoTranscriptome analysis of Anopheles stephensiembryo using expressed sequence tags 301

MotilityCellular ontogeny of RBMY during humanspermatogenesis and its role in sperm motility 85Rhamnolipid but not motility is associatedwith the initiation of biofilm seeding dispersalof Pseudomonas aeruginosa strain PA17 149

Mouse embryonic fibroblasts (MEFs)Derivation, characterization and retinal differentiationof induced pluripotent stem cells 123

mRNA decaymRNA quality control pathways in Saccharomycescerevisiae 615

mRNA surveillancemRNA quality control pathways in Saccharomycescerevisiae 615

MTHFRLower incidence of nonsyndromic cleft lipwith or without cleft palate in females:Is homocysteine a factor? 21

MucinRole of amylase, mucin, IgA and albuminon salivary protein buffering capacity: A pilot study 259

MummiesBiomphalaria alexandrina in Egypt: Past, presentand future 665

MutationA mini-IRES sequence for stringent selectionof high producers 245

Mutational analysisMolecular flexibility of Mycobacterium tuberculosisribosome recycling factor and its functionalconsequences: An exploration involving mutants 845

MycorrhizalIndigenous actinorhizal plants of Australia 749

MyricaMicromonospora is a normal occupantof actinorhizal nodules 685Amplicon restriction patterns associatedwith nitrogenase activity of root nodulesfor selection of superior Myrica seedlings 789

Myrica esculentaEvaluation of phytochemical constituentsand antioxidant activity of selected actinorhizalfruits growing in the forests of Northeast India 797

Myrica nagiEvaluation of phytochemical constituents and antioxidantactivity of selected actinorhizal fruits growingin the forests of Northeast India 797

Natural historyNatural history in India during the 18th and 19thcenturies 201

Neuronal damageEffect of normabaric hyperoxia treatment on neuronaldamage following fluid percussion injury in the striatumof mice: A morphological approach 93

NifHFunctional divergence outlines the evolutionof novel protein function in NifH/BchLprotein family 733

Nile DeltaBiomphalaria alexandrina in Egypt: Past, presentand future 665

NitrogenGrowth response of Casuarina equisetifolia Forst.rooted stem cuttings to Frankia in nurseryand field conditions 741

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Nitrogen fixationEffect of salt stress on the physiology of Frankiasp strain CcI6 699What stories can the Frankia genomes start to tell us? 719Casuarina glauca: A model tree for basic researchin actinorhizal symbiosis 815

NitrogenaseStructural and gene expression analysesof uptake hydrogenases and other proteinsinvolved in nitrogenase protection in Frankia 703

Nitrogenase activityAmplicon restriction patterns associatedwith nitrogenase activity of root nodulesfor selection of superior Myrica seedlings 789

NMDmRNA quality control pathwaysin Saccharomyces cerevisiae 615

NOD1 and NOD2NOD1 and NOD2 receptors in mrigal(Cirrhinus mrigala): Inductive expressionand downstream signalling in ligand stimulationand bacterial infections 533

NoduleGrowth and N2 fixation in an Alnus hirsuta(Turcz.) var. sibirica stand in Japan 761

Non-deep simple epicotyl MPDEpicotyl morphophysiological dormancy in seedsof Lilium polyphyllum (Liliaceae) 13

Normabaric hyperoxiaEffect of normabaric hyperoxia treatmenton neuronal damage following fluid percussioninjury in the striatum of mice:A morphological approach 93

NSCL±PLower incidence of nonsyndromic cleft lipwith or without cleft palate in females:Is homocysteine a factor? 21

NSCLCMiR-200a enhances the migrations of A549and SK-MES-1 cells by regulatingthe expression of TSPAN1 523

Nucleoid-binding proteinParA encoded on chromosome II of Deinococcusradiodurans binds to nucleoid and inhibitscell division in Escherichia coli 487

OncogenesThe aging of the 2000 and 2011 Hallmarksof Cancer reviews: A critique 651

OperonWhat history tells us XXXI. The repliconmodel: Between molecular biologyand molecular cell biology 225

Oral capsaicinRepeated oral administration of capsaicin increasesanxiety-like behaviours with prolongedstressresponse in rats 561

OrientationInfluence of gaze and directness of approachon the escape responses of the Indian rock lizard,Psammophilus dorsalis (Gray, 1831) 829

Oriented crystalliteBiomineralization: Some complex crystallite-orientedskeletal structures 925

Osmotic stressEffect of salt stress on the physiology of Frankiasp strain CcI6 699

OsSAG12Down-regulation of OsSAG12-1 resultsin enhanced senescence and pathogen-inducedcell death in transgenic rice plants 583

OsteoarthritisPotential of Raloxifene in reversingosteoarthritis-like alterations in rat chondrocytes:An in vitro model study 135

OvalbuminA simple and reliable methodology to detectegg white in art samples 397

Oxidase-positiveDevelopment of rapid phenotypic systemfor the identification of Gram-negative oxidase-positivebacilli in resource-limited settings 329

Oxidative stressAccelerated fat cell aging links oxidative stressand insulin resistance in adipocytes 113Altered DNA repair, oxidative stress and antioxidantstatus in coronary artery disease 385

p53Accelerated fat cell aging links oxidative stressand insulin resistance in adipocytes 113

PalindromeAn algorithm to find all palindromic sequencesin proteins 173

ParAParA encoded on chromosome II of Deinococcusradiodurans binds to nucleoid and inhibitscell division in Escherichia coli 487

ParacaspaseA functional connection of Dictyostelium paracaspasewith the contractile vacuole and a possible partnerof the vacuolar proton ATPase 509

PCR-RFLPABCA1 C69T gene polymorphism and risk of type2 diabetes mellitus in a Saudi populatio 893

Pharaonic timesBiomphalaria alexandrina in Egypt: Past, presentand future 665

PhenolEvaluation of phytochemical constituentsand antioxidant activity of selected actinorhizalfruits growing in the forests of Northeast India 797

PhenotypicDevelopment of rapid phenotypic systemfor the identification of Gram-negativeoxidase-positive bacilli in resource-limited settings 329

Photosynthetic characteristicsSeagrasses in tropical Australia, productiveand abundant for decades decimated overnight 157

PhylogeneticFunctional divergence outlines the evolution of novelprotein function in NifH/BchL protein family 733

PhylotypingA unique DNA repair and recombination gene (recN)sequence for identification and intraspecificmolecular typing of bacterial wilt pathogenRalstonia solanacearum and its comparativeanalysis with ribosomal DNA sequences 267

PhysiologyUV-screening of grasses by plant silica layer? 413

PigmentationFunctional analyses of a flavonol synthase–likegene from Camellia nitidissima reveal its rolesin flavonoid metabolism during floral pigmentation 593

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PigmentsA simple and reliable methodology to detect eggwhite in art samples 397

PIP2Inactivation of Tor proteins affects the dynamicsof endocytic proteins in early stage of endocytosis 351

Plant immunityPlant innate immunity: An updated insightinto defense mechanism 433

Plant opalUV-screening of grasses by plant silica layer? 413

Plasticity and protein functionMolecular flexibility of Mycobacterium tuberculosisribosome recycling factor and its functionalconsequences: An exploration involvingmutants 845

Poly-N-acetyllactosamineα2,6 Sialylation associated with increasedβ1,6-branched N-oligosaccharides influencescellular adhesion and invasion 867

Polycomb groupRegulation of DU145 prostate cancer cell growthby Scm-like with four mbt domains 2 105

PolygamyOrigin and occurrence of sexual and matingsystems in Crustacea: A progression towardscommunal living and eusociality 951

Polymerase chain reactionCandidate gene markers for CandidatusLiberibacter asiaticus for detectingcitrus greening disease 229

Positive selectionFunctional divergence outlines the evolutionof novel protein function in NifH/BchLprotein family 733Signatures of positive selection in LY96 genein vertebrates 899

Potassium channelsSide-effects of protein kinase inhibitorson ion channels 937

ProliferationThe aging of the 2000 and 2011 Hallmarksof Cancer reviews: A critique 651

Protein concentrationRole of amylase, mucin, IgA and albuminon salivary protein buffering capacity:A pilot study 259

Protein kinase CSide-effects of protein kinase inhibitorson ion channels 937

Protein structureMolecular flexibility of Mycobacteriumtuberculosis ribosome recycling factorand its functional consequences:An exploration involving mutants 845

ProteinsAn algorithm to find all palindromic sequencesin proteins 173

ProteomicsA simple and reliable methodology to detectegg white in art samples 397

PseudogenesCharacterization of pseudogenes in membersof the order Frankineae 727

PseudomonasDevelopment of rapid phenotypic systemfor the identification of Gram-negativeoxidase-positive bacilli in resource-limitedsettings 329

Pseudomonas aeruginosaRhamnolipid but not motility is associatedwith the initiation of biofilm seeding dispersalof Pseudomonas aeruginosa strain PA17 149

Publishing companiesOn toxic effects of scientific journals 189

Pulse amplitude modulationModulations in the light of the firefly 9

Pulse width modulationModulations in the light of the firefly 9

QSARIn silico–based combinatorial pharmacophoremodelling and docking studies of GSK-3βand GK inhibitors of Hippophae 805

Quality controlmRNA quality control pathwaysin Saccharomyces cerevisiae 615

Quorum-sensing inhibitionInfluence of clove oil on certain quorum-sensing-regulated functions and biofilm of Pseudomonasaeruginosa and Aeromonas hydrophila 835

RaceA unique DNA repair and recombination gene (recN)sequence for identification and intraspecificmolecular typing of bacterial wilt pathogenRalstonia solanacearum and its comparativeanalysis with ribosomal DNA sequences 267

Radicle tipExcised radicle tips as a source of genomic DNAfor PCR-based genotyping and melting curveanalysis in cotton 167

RaloxifenePotential of Raloxifene in reversing osteoarthritis-likealterations in rat chondrocytes: An in vitromodel study 135

Ralstonia solanacearumA unique DNA repair and recombination gene(recN) sequence for identification and intraspecificmolecular typing of bacterial wilt pathogenRalstonia solanacearum and its comparativeanalysis with ribosomal DNA sequences 267

RBMYCellular ontogeny of RBMY during humanspermatogenesis and its role in sperm motility 85

Real-time PCREarly repeated maternal separation inducesalterations of hippocampus reelin expressionin rats 27

recN geneA unique DNA repair and recombination gene(recN) sequence for identification and intraspecificmolecular typing of bacterial wilt pathogen Ralstoniasolanacearum and its comparative analysiswith ribosomal DNA sequences 267

Reelin mRNAEarly repeated maternal separation inducesalterations of hippocampus reelin expressionin rats 27

ReligionThere is no common ground between scienceand religion 181

ReoxygenationShort-term hypoxia/reoxygenation activates theangiogenic pathway in rat caudate putamen 363

RepliconWhat history tells us XXXI. The replicon model:Between molecular biology and molecularcell biology 225

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Retinal pigmented epithelium (RPE)Derivation, characterization and retinaldifferentiation of induced pluripotentstem cells 123

RhamnolipidRhamnolipid but not motility is associatedwith the initiation of biofilm seeding dispersalof Pseudomonas aeruginosa strain PA17 149

Ribosome disassemblyMolecular flexibility of Mycobacteriumtuberculosis ribosome recycling factorand its functional consequences:An exploration involving mutants 845

RiceDown-regulation of OsSAG12-1 resultsin enhanced senescence and pathogen-inducedcell death in transgenic rice plants 583

Rice stripe virusProduction of marker-free and RSV-resistanttransgenic rice using a twin T-DNA systemand RNAi 573

Risk factorsMaternal hormonal interventions as a risk factorfor Autism Spectrum Disorder: An epidemiologicalassessment from India 887

RNA degradationFluorescent tag is not a reliable marker for smallRNA transfection in the presence of serum 471

RNA interferenceProduction of marker-free and RSV-resistanttransgenic rice using a twin T-DNA systemand RNAi 573

RNA-binding proteinCellular ontogeny of RBMY during humanspermatogenesis and its role in sperm motility 85

RNA-silencing suppressorsSuppressors of RNA silencing encoded by tomatoleaf curl betasatellites 45

RNAiPlant innate immunity: An updated insightinto defense mechanism 433Down-regulation of OsSAG12-1 results in enhancedsenescence and pathogen-induced cell deathin transgenic rice plants 583

Root nodulesGrowth response of Casuarina equisetifolia Forst.rooted stem cuttings to Frankia in nurseryand field conditions 741

Rrp6pmRNA quality control pathways in Saccharomycescerevisiae 615

SAG12Down-regulation of OsSAG12-1 resultsin enhanced senescence and pathogen-induced celldeath in transgenic rice plants 583

Salicylic acidChanges in leaf proteome profile of Arabidopsisthaliana in response to salicylic acid 317

Salmonella enterica serovar TyphimuriumA low-pH medium in vitro or the environmentwithin a macrophage decreases the transcriptionallevels of fimA, fimZ and lrp in Salmonellaenterica serovar Typhimurium 499

Salt stressEffect of salt stress on the physiology of Frankiasp strain CcI6 699

Saudi populationABCA1 C69T gene polymorphism and risk of type 2diabetes mellitus in a Saudi populatio 893

Schistosoma mansoniBiomphalaria alexandrina in Egypt: Past, presentand future 665

Science journalsOn toxic effects of scientific journals 189

Science policyOn toxic effects of scientific journals 189

Scientific knowledgeThere is no common ground between scienceand religion 181

ScissionInactivation of Tor proteins affects the dynamicsof endocytic proteins in early stage of endocytosis 351

ScoC (Hpr)Spo0A positively regulates epr expressionby negating the repressive effect of co-repressors,SinR and ScoC, in Bacillus subtilis 291

Seagrass productionSeagrasses in tropical Australia, productiveand abundant for decades decimated overnight 157

Seed germinationEpicotyl morphophysiological dormancy in seedsof Lilium polyphyllum (Liliaceae) 13

Seed purity testingExcised radicle tips as a source of genomic DNAfor PCR-based genotyping and melting curveanalysis in cotton 167

Semantic judgmentAssessment of lexical semantic judgment abilitiesin alcohol-dependent subjects: An fMRI study 905

SenescenceAccelerated fat cell aging links oxidative stressand insulin resistance in adipocytes 113

SerumFluorescent tag is not a reliable marker for smallRNA transfection in the presence of serum 471

Sexual biologyOrigin and occurrence of sexual and matingsystems in Crustacea: A progression towardscommunal living and eusociality 951

Sexual dimorphismMale- and female-specific variants of doublesexgene products have different roles to play towardsregulation of Sex combs reduced expressionand sex comb morphogenesis in Drosophila 455

SFMBT2Regulation of DU145 prostate cancer cell growthby Scm-like with four mbt domains 2 105

SilicaUV-screening of grasses by plant silica layer? 413

SinRSpo0A positively regulates epr expressionby negating the repressive effect of co-repressors,SinR and ScoC, in Bacillus subtilis 291

Skeletal structuresBiomineralization: Some complex crystallite-orientedskeletal structures 925

SLC19A1 (RFC1)Lower incidence of nonsyndromic cleft lipwith or without cleft palate in females: Is homocysteinea factor? 21

Small RNA transfectionFluorescent tag is not a reliable marker for smallRNA transfection in the presence of serum 471

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SNPIntegrated genomics and molecular breedingapproaches for dissecting the complex quantitativetraits in crop plants 971

SoilFirst report on the occurrence of the uncultivatedcluster 2 Frankia microsymbionts in soil outsidethe native actinorhizal host range area 695

Somatic mutation theoryThe aging of the 2000 and 2011 Hallmarksof Cancer reviews: A critique 651

Sound stimulationRole of sound stimulation in reprogrammingbrain connectivity 605

SpermatogenesisCellular ontogeny of RBMY during humanspermatogenesis and its role in sperm motility 85

SpermatozoaCellular ontogeny of RBMY during humanspermatogenesis and its role in sperm motility 85

Spo0ASpo0A positively regulates epr expressionby negating the repressive effect of co-repressors,SinR and ScoC, in Bacillus subtilis 291

SSRIntegrated genomics and molecular breedingapproaches for dissecting the complex quantitativetraits in crop plants 971

Status epilepticusRegion-specific vulnerability to endoplasmicreticulum stress-induced neuronal deathin rat brain after status epilepticus 877

Stem cellsStem cell function and maintenance – endsthat matter: Role of telomeres and telomerase 641

Sticky endIdentification of a premature terminationof DNA polymerization in vitroby Klenow fragment mutants 279Realizing directional cloning using stickyends produced by 3′-5′ exonucleaseof Klenow fragment 857

StressRepeated oral administration of capsaicinincreases anxiety-like behaviours with prolongedstressresponse in rats 561

StriatumEffect of normabaric hyperoxia treatmenton neuronal damage following fluid percussion injuryin the striatum of mice: A morphological approach 93

StromaThe aging of the 2000 and 2011 Hallmarksof Cancer reviews: A critique 651

SymbioticIndigenous actinorhizal plants of Australia 749

Symbiotic geneCasuarina glauca: A model tree for basic researchin actinorhizal symbiosis 815

Synaptic plasticityRole of sound stimulation in reprogrammingbrain connectivity 605

Systemic acquired resistancePlant innate immunity: An updated insightinto defense mechanism 433

Tail-raiseInfluence of gaze and directness of approachon the escape responses of the Indianrock lizard, Psammophilus dorsalis(Gray, 1831) 829

TelomeraseStem cell function and maintenance – ends that matter:Role of telomeres and telomerase 641

TelomeresStem cell function and maintenance – ends that matter:Role of telomeres and telomerase 641

TestisCellular ontogeny of RBMY during humanspermatogenesis and its role in sperm motility 85

Thalassia hemprichiiSeagrasses in tropical Australia, productiveand abundant for decades decimated overnight 157

TinkeringWhat history tells us XXXI. The replicon model: Betweenmolecular biology and molecular cell biology 225

Tissue organization field theoryThe aging of the 2000 and 2011 Hallmarks of Cancerreviews: A critique 651

TLR4Signatures of positive selection in LY96 genein vertebrates 899

Suppressors of RNA silencing encoded by tomatoleaf curl betasatellites 45

Tomato leaf curl betasatellitesSuppressors of RNA silencing encoded by tomatoleaf curl betasatellites 45

Tor2Inactivation of Tor proteins affects the dynamicsof endocytic proteins in early stage of endocytosis 351

TrafficVps1 in the late endosome-to-vacuole traffic 73

Trans-generational immune memoryPlant innate immunity: An updated insightinto defense mechanism 433

TranscriptionOverlapping transcription structure of humancytomegalovirus UL140 and UL141 genes 35

TranscriptomeTranscriptome analysis of Anopheles stephensiembryo using expressed sequence tags 301

TransformationCodon-optimized antibiotic resistance gene improvesefficiency of transient transformation in Frankia 713

Transgenic riceProduction of marker-free and RSV-resistanttransgenic rice using a twin T-DNA systemand RNAi 573

Transposable elementsCharacterization of pseudogenes in membersof the order Frankineae 727

Traumatic brain injuryEffect of normabaric hyperoxia treatmenton neuronal damage following fluid percussioninjury in the striatum of mice:A morphological approach 93

TriatominaeRhodnius prolixus and Rhodnius robustus–like(Hemiptera, Reduviidae) wing asymmetryunder controlled conditions of populationdensity and feeding frequency 549

Tropical seagrassSeagrasses in tropical Australia, productiveand abundant for decades decimated overnight 157

TSPAN1MiR-200a enhances the migrations of A549and SK-MES-1 cells by regulating the expressionof TSPAN1 523

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TunisiaFirst report on the occurrence of the uncultivatedcluster 2 Frankia microsymbionts in soil outsidethe native actinorhizal host range area 695

Twin T-DNAProduction of marker-free and RSV-resistanttransgenic rice using a twin T-DNA systemand RNAi 573

Type 2 diabetes mellitus (T2DM)ABCA1 C69T gene polymorphism and riskof type 2 diabetes mellitus in a Saudi populatio 893

Tyrosine kinasesFatty acyl chain-dependent but charge-independentassociation of the SH4 domain of Lckwith lipid membranes 63

UL138Down-regulation of human cytomegalovirusUL138, a novel latency-associated determinant,by hcmv-miR-UL36 479

UL140Overlapping transcription structure of humancytomegalovirus UL140 and UL141 genes 35

UL141Overlapping transcription structure of humancytomegalovirus UL140 and UL141 genes 35

Ultraviolet radiationUV-screening of grasses by plant silica layer? 413

Unit membraneWhat history tells us XXX. The emergenceof the fluid mosaic model of membranes 3

Vacuolar proton ATPaseA functional connection of Dictyostelium paracaspasewith the contractile vacuole and a possible partnerof the vacuolar proton ATPase 509

VacuoleVps1 in the late endosome-to-vacuole traffic 73

Vascular endothelial growth factorShort-term hypoxia/reoxygenation activatesthe angiogenic pathway in rat caudate putamen 363

VertebratesSignatures of positive selection in LY96 genein vertebrates 899

VesicleCharacterization of haemoglobinfrom Actinorhizal plants – Anin silico approach 777

Virus overlay protein binding assayWhite Spot Syndrome Virus infectionin Penaeus monodon is facilitatedby housekeeping molecules 917

Virus–host interactionWhite Spot Syndrome Virus infectionin Penaeus monodon is facilitatedby housekeeping molecules 917

Vps1Vps1 in the late endosome-to-vacuole traffic 73

Walker-type ATPaseParA encoded on chromosome IIof Deinococcus radiodurans bindsto nucleoid and inhibits cell divisionin Escherichia coli 487

Xanthomonas oryzaeDown-regulation of OsSAG12-1 resultsin enhanced senescence and pathogen-inducedcell death in transgenic rice plants 583

Zostera muelleriSeagrasses in tropical Australia,productive and abundant for decadesdecimated overnight 157

α2,6-linked sialic acidα2,6 Sialylation associated with increasedβ1,6-branched N-oligosaccharides influencescellular adhesion and invasion 867

β1,6-branched N-oligosaccharidesα2,6 Sialylation associated with increasedβ1,6-branched N-oligosaccharides influencescellular adhesion and invasion 867

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