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bioconductor with python, what else ?ismb / bosclaurent gautier [[email protected]]dmac / cbsjuly 10th, 20101 / 20disclaimer this is not about the comparative merits of…
dealing with the data deluge: what can the robotics community teach us? making our pipelines organic, adaptable, and scalable darin london part i. the challenges of nextgen…
1. the genome analysis toolkit a mapreduce framework for analyzing next-generation dna sequencing data ma# hanna and mark depristo genome sequencing and analysis…
1. the goby framework: towards efficient next-generation sequencing data analysis nyasha chambwe , kevin c. dorff, marko srdanovic,xutao deng, stuart j.d. andrews, fabien…
1.ronald taylor, ph.d. computational biology & bioinformatics group computational sciences & mathematics division pacific northwest national laboratory (pnnl) richland,…
1.cloud technologies and their applicationsthe bioinformatics open source conference (bosc 2010) boston, massachusettsjudy qiuhttp://salsahpc.indiana.eduassistant director,…
1. backgroundimplementation software featuresexamplessummary evoker:a visualization tool for genotype intensity data james a. morris 1 , joshua c. randall 2 , julian b. maller…
1.community integrationdemocratization biopython: challenges brad chapmanpeter cock biopython contributorshttp://biopython.org 10 july 2010 2. community integration democratization…
1.biorubyproject update raoul j.p. bonnal co-authors: toshiaki katayama [email protected] prins life science informatics mitsuteru nakao integrative biology program fondazione…
1.community-driven computational biology with debian and tavernasteffen möller, hajo krabbenhöft (lübeck) alan williams, katy wolstencroft, carole goble (manchester)andreas…
1. seqware query engine storing & searching sequence data in the cloudbrian o'connorunc lineberger comprehensive cancer centerbosc july 9th, 2010 2. seqware query…
1. iprstats: a visualization tool forinterproscan iddo friedbergmicrobiology and computer science & software engineeringmiami university http://github.com/devrkel/iprstats.git…
1. the hdf group biohdf open binary file formats for next-generation sequencing data current status and future directions dana robinson the hdf group [email protected]…
1. connecting topsan to computational analysischristian m zmasek, kyle ellrott, dana weekes, constantina bakolitsa, john wooley, adam godzikjoint center for structural genomicssanford-burnham…
1. the microsoft biology foundation and its applicationssimon mercerdirector for health & wellbeingmicrosoft external research 2. microsoft external research - software…
1. towards a federated microarray gene expression repository using molgenis and mage-tabalexandroskanterakis, tomasz adamusiak, juhamuilu, helen parkinson, despoinaantonakaki,…
1. mobyle bioinformatics web portalproject updatehervé ménager bosc – july 9th, 2010 2. what is mobyle? ● a bioinformatics analysis web portal. ● provides an access…
1. concurrent bioinformatics software fordiscovering genome-wide patternsand word-based genomic signaturesjens lichtenberg, kyle kurz, xiaoyu liang, rami al-ouran, lev neiman,…
musite: prediction of proteinmusite: prediction of protein phosphorylation sitesphosphorylation sites jianjiong gao university of missouri columbiauniversity of missouri,…
1. snp allele designations (bio::snp::inherit) christopher bottoms bosc 2010 2. 5 million data “items” one cpu:2+ days eight cpus: 1-2 days 3. snp id sample id base1…