screening for enterocins and detection of hemolysin and vancomycin resistance in enterococci of...
TRANSCRIPT
Screening for enterocins and detection of hemolysin and
vancomycin resistance in enterococci of different origins
L. De Vuysta,*, M.R. Foulquie Morenoa, H. Revetsb
aResearch Group of Industrial Microbiology, Fermentation Technology and Downstream Processing, Vrije Universiteit Brussel (VUB-IMDO),
Pleinlaan 2, B-1050 Brussels, BelgiumbDepartment of Immunology, Parasitology and Ultrastructure, Vlaams Interuniversitair Instituut voor Biotechnologie,
Vrije Universiteit Brussel, Paardenstraat 65, B-1640 Sint-Genesius-Rode, Belgium
Received 19 April 2002; accepted 12 September 2002
Abstract
The inhibitory activity of 122 out of 426 Enterococcus strains of geographically widespread origin and from different
sources (food and feed, animal isolates, clinical and nonclinical human isolates) was tested against a wide range of
indicator bacteria. Seventy-two strains, mainly belonging to the species Enterococcus faecium and Enterococcus faecalis
were bacteriocinogenic. A remarkable variation of inhibitory spectra occurred among the strains tested, including inhibition
of, for instance, only closely related enterococci, other lactic acid bacteria (LAB), food spoilage and pathogenic bacteria.
No correlation could be found between the origin of the strains and the type of inhibitory spectrum, although a clustering
of human isolates from both fecal and clinical origin was observed in the group of strains inhibiting lactic acid bacteria,
Listeria, and either Staphylococcus or Clostridium. No relationship could be established between the presence of enterocin
structural genes and the origin of the strain either, and hence no correlation seemed to exist between the presence of
known enterocin genes and the activity spectra of these enterococci. The structural gene of enterocin A was widely
distributed among E. faecium strains, whereas that of enterocin B only occurred in the presence of enterocin A. The
vancomycin resistance phenotype as well as the presence of vancomycin resistance genes was also investigated. The vanA
gene only occurred among E. faecium strains. The incidence of h-hemolysis was not restricted to E. faecalis strains, but
among the E. faecium strains the structural genes of cytolysin were not detected. h-Hemolysis occurred in strains both
from food and nonfood origin. It has been concluded that bacteriocin-producing E. faecium strains lacking hemolytic
activity and not carrying cytolysin nor vancomycin resistance genes may be useful as starter cultures, cocultures, or
probiotics.
D 2002 Elsevier Science B.V. All rights reserved.
Keywords: Bacteriocin; Enterocin; Vancomycin; Enterococcus
1. Introduction
Enterococci are an important group of the generally
recognized as safe (GRAS) lactic acid bacteria (LAB)
(Devriese and Pot, 1995). Enterococcus faecium and
Enterococcus faecalis are the most frequently occur-
0168-1605/02/$ - see front matter D 2002 Elsevier Science B.V. All rights reserved.
doi:10.1016/S0168-1605(02)00425-7
* Corresponding author. Tel.: +32-2-629-32-45; fax: +32-2-
629-27-20.
E-mail address: [email protected] (L. De Vuyst).
www.elsevier.com/locate/ijfoodmicro
International Journal of Food Microbiology 84 (2003) 299–318
ring enterococcal species in the human GIT (Murray,
1990), they persist in the extraenteral environment,
and they are ubiquitous in food processing establish-
ments. Hence, they can become an important part of
the food microflora. However, the status of enter-
ococci as harmless bacteria in foods is being chal-
lenged by their growing importance in nosocomial
infections. E. faecalis is the most frequent enterococ-
cal species isolated (Jett et al., 1994). Consequently,
the control of enterococci in foods has assumed a new
level of importance in food processing and food
microbiology. However, enterococci display desirable
metabolic activities such as lipolytic and esterolytic
activities, citrate utilization and bacteriocin (enter-
ocin) production (Tsakalidou et al., 1993; Giraffa,
1995; Sarantinopoulos et al., 2001). Hence, enter-
ococci may play an important role in the ripening
and the development of aroma and flavor of certain
traditional cheeses from Mediterranean countries
(Coppola et al., 1988; Litopoulou-Tzanetaki and Tza-
netakis, 1992; Tzanetakis and Litopoulou-Tzanetaki,
1992; Litopoulou-Tzanetaki et al., 1993; Torri Tarelli
et al., 1994; Freitas et al., 1995; Macedo et al., 1995;
Centeno et al., 1996). In situ bacteriocin production
may further improve the competitiveness of strains
that naturally occur on the one hand, and deliver a
microbiologically safe end product on the other hand.
Hence, bacteriocin-producing enterococci may be
exploited as commercial starter cultures, provided
they can be considered as safe (Giraffa et al., 1997).
For a long time, some enterococci have been used as
probiotic cultures in human and animal health promo-
tion (Lewenstein et al., 1979; Bellomo et al., 1980;
Underdahl, 1983).
Most enterococci are known to produce class II
bacteriocins, i.e. bacteriocins that are small (4–6
kDa), heat-stable, cationic, hydrophobic, and antibac-
terial peptides (De Vuyst and Vandamme, 1994; Nes
et al., 1996). They consist of between 30 and 60
amino acid residues, and are in particular inhibitory
towards related, Gram-positive bacteria. Currently,
three subclasses can be distinguished among class II
bacteriocins (Ennahar et al., 2000). Enterocin A
(Aymerich et al., 1996), enterocin P (Cintas et al.,
1997), and enterocin CRL35 (Farıas et al., 1996) from
E. faecium, bacteriocin 31 from E. faecalis (Tomita et
al., 1996), and mundticin from Enterococcus mundtii
(Bennik et al., 1998) belong to class IIa. Class IIa
antibacterial peptides are characterized by the pres-
ence of a consensus sequence motif YGNG in their
N-terminal amino acid sequence, the presence of
cysteine residues involved in one (or more) disulfide
bond(s), as well as by their strong inhibitory effect
towards Listeria (Eijsink et al., 1998; Ennahar et al.,
2000). They are synthesized ribosomally as prepep-
tides with an N-terminal leader peptide of the double-
glycine type that is cleaved off during translocation,
and they are secreted out of the cell by dedicated
transport machinery, except for enterocin P (Cintas
et al., 1997). The latter bacteriocin is secreted via
the general secretory pathway of the cell, a property
that was first used to distinguish another subclass
among class II bacteriocins; however, the former
class IIc has been eliminated (Ennahar et al., 2000;
Cleveland et al., 2001). Class IIb bacteriocins are
composed of two polypeptide chains. Class IIc (for-
merly sometimes referred to as class IId) groups
bacteriocins that do not belong to the other subclasses
(Moll et al., 1999; Herranz et al., 2001), e.g. enterocin
B (Casaus et al., 1997) and enterocins L50A and
L50B (Cintas et al., 1998) from E. faecium, and
enterocins 1071A and 1071B from E. faecalis (Balla
et al., 2000). Enterocin B and the enterocins 1071A
and 1071B share the characteristics of class IIa
bacteriocins but do not contain a YGNG motif
(Casaus et al., 1997). Enterocins L50A and L50B
are synthesized without an N-terminal leader sequence
or signal peptide (Cintas et al., 1998). Furthermore,
the enterocins L50A and L50B share structural
homology with the staphylococcal hemolysins,
although they do not show hemolytic activity. Finally,
enterocin AS-48 is a cyclic peptide with broad anti-
bacterial activities against Gram-positive and Gram-
negative bacteria, and therefore it was considered a
peptide antibiotic (Galvez et al., 1989; Martınez-
Bueno et al., 1994).
An example of a class I bacteriocin or lantibiotic
is the two-component cytolysin (bacteriocin/hemoly-
sin) from E. faecalis (Booth et al., 1996). Cytolysin
is produced by a significant number of clinical E.
faecalis isolates (Gilmore et al., 1994; Booth et al.,
1996), and has been associated with virulence in
animal models (Jett et al., 1992). In addition, some
enterocins are encoded on pheromone-responsive,
conjugative plasmids (Gilmore et al., 1994; Martı-
nez-Bueno et al., 1994; Tomita et al., 1996). Pher-
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318300
omones, hemolysin or cytolysin production, as well
as resistance to phagocytosis and adherence may
potentially contribute to virulence in enterococci
(Libertin et al., 1992; Jett et al., 1994; Franz et al.,
1999a; Gasson and Eaton, 2001). Moreover, vanco-
mycin resistance is encoded by transferable genetic
elements (Arthur and Courvalin, 1993). In recent
years, there has been an emergence of antibiotic-
resistant enterococci, E. faecium being the predom-
inant enterococcal species in the subset of vancomy-
cin-resistant enterococcal (VRE) isolates (Morrison
et al., 1997).
The aim of the present study was to assess the
bacteriocin production capacity of 426 Enterococcus
spp. of geographically widespread origin and from
different sources. The vancomycin resistance pheno-
type, the presence of vancomycin resistance genes as
well as the incidence of hemolysis was also checked.
Finally, the relationship between bacteriocin produc-
tion, hemolysis, and vancomycin resistance was eval-
uated to estimate their implications for the safe
commercial application of bacteriocin-producing
enterococci in both food and health care.
2. Material and methods
2.1. Bacterial strains
A collection of 426 Enterococcus strains, that is
part of a European joint research project (FAIR CT97-
3078), is available at the BCCM/LMG Bacteria Cul-
ture Collection (Laboratory of Microbiology, Gent,
Belgium). This FAIR-E collection consists of 173
strains of E. faecium, 175 strains of E. faecalis, 34
strains of Enterococcus durans, 19 strains of Enter-
ococcus hirae, 12 strains of Enterococcus gallinarum,
6 strains of Enterococcus casseliflavus, 2 strains each
of Enterococcus malodoratus, E. mundtii and Enter-
ococcus avium, and 1 strain of Enterococcus pseu-
doavium randomly collected from food and feed as
well as animal and clinical and nonclinical human
isolates. Source and strain information is available
in the catalogue of this FAIR-E collection of enter-
ococci (Vancanneyt et al., 1999). Fifty-two strains
were used as indicators for their sensitivity towards
bacteriocins produced by the enterococci (Table 1).
Control strains for PCR detection of eight entero-
cin structural genes were obtained from different
research groups (Table 2). Four control strains for
the detection of the vancomycin resistance genotype
(vanA, vanB, vanC1, and vanC2) were kindly pro-
vided by Dr. Denis Pierard (University Hospital,
VUB, Brussels, Belgium): E. faecium Iowa 1, E.
faecium Iowa 2, E. gallinarum LMG 13129, and E.
casseliflavus 110.
2.2. Media, growth and maintenance conditions
All LAB strains were grown in MRS (de Man,
Rogosa and Sharpe) medium (Oxoid, Basingstoke,
UK) at 37 jC. Staphylococcus carnosus, Bacillus
cereus and Escherichia coli were grown in Brain
Heart Infusion (BHI) (Oxoid) at 37 jC, while Listeriaspp. were grown in the same medium at 30 jC.Propionibacterium spp., Clostridium spp., and Bifi-
dobacterium spp. were grown in MRS at 30 jC,Reinforced Clostridium Medium (RCM) (Oxoid) at
37 jC, or Beerens Medium (Beerens, 1990) at 37 jC,respectively, in an anaerobic cabinet containing 80%
N2, 10% CO2 and 10% H2 (Don Whitley Scientific,
West Yorkshire, UK). Stock cultures were stored at
� 80 jC in the same medium as used for strain
cultivation, supplemented with 25% (v/v) of glycerol.
Fresh cultures were prepared by inoculation of 10 ml
of the appropriate medium with 5 Al of the frozen
stock followed by incubation for 16 to 24 h at the
temperature indicated above.
2.3. Bacteriocin assay
Enterococcus strains that were selected for their
inhibitory activity towards Listeria, Clostridium and
Propionibacterium during a prescreening were further
screened for their capacity to produce bacteriocins by
testing cell-free culture supernatants against a series of
indicator strains (Table 1). Cell-free culture super-
natants of the Enterococcus strains were obtained by
microcentrifugation (10,000 rpm, 10 min) of 1.5 ml of
culture twice, and were adjusted to pH 6.5. Bacter-
iocin activity was detected by the agar spot assay (De
Vuyst et al., 1996), except for Clostridium spp. as
indicator strains for which an agar well diffusion
assay was performed (Lopez-Lara et al., 1991). Plates
were incubated for 16 to 20 h at the appropriate
growth temperature. Growth inhibition was visually
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318 301
detected either by observing clear inhibition zones on
top of the agar (agar spot assay) or clear halos around
the wells (agar well diffusion assay), and further
referred to as Bac+. All bacteriocin assays were done
in duplicate.
2.4. PCR detection of enterocin structural genes
PCR amplification of known structural genes of
enterocin A (Aymerich et al., 1996), enterocin B
(Casaus et al., 1997), enterocin P (Cintas et al.,
1997), enterocin L50A/ L50B (Cintas et al., 1998),
and bacteriocin 31 (Tomita et al., 1996) was per-
formed with the specific primers listed in Table 3. In
general, primers were constructed based on the C-
and N-terminal amino acid sequence of the mature
bacteriocin, and an internal nested primer was in some
cases used in conjunction with the forward primer to
further confirm the specificity of the PCR reaction.
For enterocin AS-48, the forward primer was con-
structed based on a sequence within the N-terminal
leader peptide of the bacteriocin precursor (Galvez
et al., 1989). In the case of cytolysin that consists of
two polypeptides (Cyl LL and Cyl LS), the forward
primer was constructed based on the Cyl LL sequence,
while the reverse primer was constructed based on
the Cyl LS sequence (Booth et al., 1996). No specific
primer could be designed for enterocin CRL35 (5
out of 21 amino acids are not identified; Farıas et
al., 1996).
PCR amplification was performed using total DNA
isolated by the rapid alkaline lysis method as described
in detail by Dutka-Malen et al. (1990). PCR was
performed on a DNA thermal cycler (Biometra Ther-
mocycler T3; Westburg, Leusden, The Netherlands) in
a final volume of 50 Al containing 1� PCR buffer (20
mM Tris–HCl pH 8.4, 50 mM KCl), 1.5 mM MgCl2,
200 AM each of the four dNTPs, 0.5 AM of each
Table 1
Indicator organisms used during the screening for bacteriocin production
Bacillus cereus LMG 13569 Lactobacillus helveticus LMG 13555
Bifidobacterium bifidum LMG 11041T Lactobacillus plantarum LMG 13556
Bifidobacterium breve LMG 11042T Lactobacillus reuteri LMG 13557
Bifidobacterium gallinarum LMG 11596T Lactobacillus sakei LMG 13558T
Bifidobacterium longum LMG 13197T Lactococcus lactis subsp. cremoris LMG 6897
Bifidobacterium infantis LMG 8811T Lactococcus lactis subsp. cremoris LMG 9460
Clostridium sporogenes LMG 13570 Lactococcus lactis subsp. cremoris LMG 13563
Clostridium tyrobutyricum LMG 13571 Lactococcus lactis subsp. lactis LMG 6890
Clostridium tyrobutyricum LMG 1285* Lactococcus lactis subsp. lactis LMG 7949
Enterococcus faecalis LMG 13566 Lactococcus lactis subsp. lactis LMG 8522
Enterococcus faecalis LMG 7937 Leuconostoc cremoris LMG 13562
Enterococcus faecalis LMG 8222 Listeria innocua RZS
Enterococcus faecalis LMG 11395 Listeria innocua CTC 1012
Enterococcus faecalis LMG 16216 Listeria innocua CTC 1014
Enterococcus faecalis LMG 16337 Listeria innocua LMG 13568*
Enterococcus faecium LMG 11397 Listeria innocua LMG 11387*
Enterococcus faecium LMG 11423 Listeria ivanovii LTH 3097
Enterococcus faecium LMG 14203 Pediococcus pentosaceus LMG 13560
Enterococcus faecium LMG 14255 Pediococcus pentosaceus LMG 13561
Enterococcus faecium LMG 15877 Propionibacterium acidipropionici LMG 13572
Enterococcus faecium CTC 492 Propionibacterium sp. LMG 13573
Lactobacillus acidophilus LMG 13550 Propionibacterium sp. LMG 13574
Lactobacillus delbrueckii subsp. bulgaricus LMG 13551 Propionibacterium freudenreichii subsp. shermanii LMG 16424*
Lactobacillus casei LMG 13552 Staphylococcus carnosus LMG 13567
Lactobacillus curvatus LMG 13553 Streptococcus thermophilus LMG 13564
Lactobacillus fermentum LMG 13554 Streptococcus thermophilus LMG 13565
CTC=Centre de Tecnologia de la Carn, Institut de Recerca i Tecnologia Agroalimentaries,Monells, Spain; LMG=LaboratoryMicrobiology Gent
(BCCM/LMG Bacteria Culture Collection), Gent, Belgium; LTH= Institut fur Lebensmitteltechnologie, Universitat Hohenheim, Hohenheim,
Germany; RZS=Rijkszuivelstation, Melle, Belgium.
* Used in prescreening experiment.
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318302
primer and 1.25 units of Taq DNA polymerase (Gibco
Life Technologies, Paisley, UK). The cycles used were
95 jC for 5 min for the first cycle, 95 jC for 30 s, 58
jC (for the primers of enterocin A, bacteriocin 31 and
cytolysin) or 56 jC (for the primers of the enterocins
B, P, L50A, L50B, and AS-48) for 30 s, and 72 jC for
30 s for the next 30 cycles; 72 jC for 5 min were used
for the last cycle. PCR products were resolved by
electrophoresis on a 8% polyacrylamide–Tris–ace-
tate–EDTA gel.
Initial PCR experiments carried out with total DNA
of the control strains (Table 2), using the eight sets of
primers separately, exclusively revealed the presence
of the expected enterocin in each strain, confirming
the specificity of the primers used. In the case of
enterocins P, L50A and L50B, no control strains were
available. Interestingly, the primers designed for the
enterocins P, L50A and L50B used in the PCR
reactions with total DNA of the strains, mentioned
in Table 2, did not give any amplification signal. This
Table 3
Specific terminal and nested primers for the PCR detection of enterocin structural genes
Enterocin Forward primer Nested primer Reverse primer
A 5V-GGT ACC ACT CAT
AGT GGA AA-3V5V-AAT GTA CGG TCG
ATT GGG CCA-3V5V-CCC TGG AAT TGC
TCC ACC TAA-3VB 5V-CAA AAT GTA AAA
GAA TTA AGT ACG-3V5V-AAC TTA TCT AAA
GGT GGA GCA-3V5V-AGA GTA TAC ATT
TGC TAA CCC-3VP 5V-GCT ACG CGT TCA
TAT GGT AAT-3V– 5V-TCC TGC AAT ATT
CTC TTT AGC-3V31 5V-CCT ACG TAT TAC
GGA AAT GGT-3V5V-TGG GTA GAC TGG
AAT AAA GCT-3V5V-GCC ATG TTG TAC
CCA ACC ATT-3VAS48 5V-GAG GAG TAT CAT
GGT TAA AGA-3V5V-GCA GTT GCA GGA
ACT GTG CT-3V5V-ATA TTG TTA AAT
TAC CAA-3VL50A 5V-ATG GGA GCA ATC
GCA AAA TTA-3V– 5V-TTT GTT AAT TGC
CCA TCC TTC-3VL50B Idem L50A-F – 5V-TAG CCA TTT TTC
AAT TTG ATC-3VCyl 5V-GGC GGT ATT TTT
ACT GGA GTN-3V– 5V-CCT ACT CCT AAG
CCT ATG GTA-3V
Table 2
Control strains used for the detection of known enterocin structural genes through PCR
Control strain Enterocins Bacteriocin data Origin
Enterococcus faecium
CTC492
A 47 aa, pediocin-like,
GG-leader (18 aa)
M. Hugas, IRTA, Monells, Spain
B 53 aa, GG-leader (18 aa)
Enterococcus faecalis
FA2-2 (pYI17)
31 43 aa, pediocin-like,
sec-dependent leader (24 aa)
Y. Ike, Gumma University School of Medicine,
Gumma, Japan
Enterococcus faecium
CRL35
CRL35 21 aa, pediocin-like,
no leader reported
F. Sesma, INSIBIO, Tucuman, Argentina
Enterococcus faecalis X1 AS-48 70 aa, leader M. Nunez, CIT-INIA, Madrid, Spain
Enterococcus faecalis X2
Enterococcus faecalis X3
Enterococcus faecalis 7C5
Enterococcus faecalis
OG1X (pAM714)
Cyl LL 38 aa, lantibiotic,
secretion signal (30 aa)
D.B. Clewell, University of Michigan,
Ann Arbor, Michigan, USA
Cyl LS 21 aa, lantibiotic,
secretion signal (42 aa)
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318 303
indicates that the latter primers were sufficiently
specific to distinguish the structural genes of the
enterocins P, L50A and L50B from the other enter-
ocins investigated.
For reproducibility, PCR reactions were repeated
on freshly isolated total DNA from 27 enterococci
that were randomly chosen. Three strains were
included as negative controls, namely E. mundtii
W6 (producer of mundticin), E. faecium FAIR-E 20,
and E. faecalis FAIR-E 256. E. faecium CTC 492
(enterocins A and B), E. faecalis FA2-2 carrying the
plasmid pYI171 (bacteriocin 31), E. faecalis X1
(enterocin AS-48), and E. faecalis OG1X carrying
the plasmid pAM714 (cytolysin) were used as positive
controls.
Confirmation of specific enterocin sequences
(enterocins P, L50A and L50B for which no controls
were available, and bacteriocin 31) or sequences from
strains carrying multiple enterocin structural genes, in
both cases chosen randomly, was done by sequencing
of PCR amplicons with an automated DNA sequencer
(ALFk DNA Sequencer; Amersham Pharmacia Bio-
tech, Uppsala, Sweden).
2.5. Hemolysis
The Enterococcus strains were grown overnight in
MRS medium at 37 jC, and then transferred onto
Blood Agar Base (Oxoid) plates containing 7% of
human blood (University Hospital Gent, Gent, Bel-
gium). The plates were incubated overnight at 37 jC.The hemolytic reaction was recorded by observation
of a clear zone of hydrolysis around the colonies
(h hemolysis), a partial hydrolysis and greening zone
(a hemolysis) or no reaction (g hemolysis).
2.6. Vancomycin and teicoplanin susceptibility test
Susceptibility of the Enterococcus strains to the
glycopeptide antibiotics, vancomycin and teicopla-
nin, was checked using a broth dilution technique.
A glycopeptide standard solution was prepared
by dissolving 6.4 mg of either vancomycin (Lilly
Deutschland, Hessen, Germany) or teicoplanin
(Hoechst Marion Roussel Deutschland, Bad Soden,
Germany) in 100 ml of Trypticase Soy Yeast Ex-
tract (TSYE) medium. TSYE contains per liter of
distilled water, adjusted to pH 7.1: 30.0 g of trypticase
soy broth (Merck) and 3.0 g of yeast extract (Merck).
A two-fold dilution series of the antibiotics was
prepared by transferring 5 ml of the standard solution
into 5 ml of sterile TSYE resulting in tubes with a
concentration of 64, 32, 16, 8, 4, and 2 Ag of the
antibiotic per ml. The Enterococcus strains were
grown overnight in TSYE. They were subsequently
transferred to each tube (1 Al). After an incubation
period of 24 h at 37 jC, the Minimum Inhibitory
Concentration (MIC) values were determined as the
lowest antibiotic concentration that did not allow
growth.
2.7. Detection of the glycopeptide resistance genotype
by multiplex PCR
Detection of glycopeptide resistance genotypes
was performed by multiplex PCR as described pre-
viously (Dutka-Malen et al., 1995). Primers for
vanA, vanB, vanC1, and vanC2 were used in the
assay.
3. Results
3.1. Screening for bacteriocin production
A prescreening of 426 strains of Enterococcus
spp. that was carried out by different European
research groups in the frame of a European joint
research project (FAIR) revealed 122 Enterococcus
strains inhibitory towards Listeria, Clostridium and/or
Propionibacterium: 63 E. faecium, 41 E. faecalis, 8
E. durans, 5 E. hirae, 2 E. gallinarum, 1 E. casseli-
flavus, 1 E. mundtii, and 1 E. avium. These inhibitory
Enterococcus strains were subjected to an extended
screening for bacteriocin production using 52 indi-
cator bacteria, under carefully controlled conditions.
The results are shown in Tables 4 and 5. Fifty strains
(41.0%) did not produce a bacteriocin (Bac�). Sev-
enty-two strains (59.0%) were bacteriocinogenic
(Bac+): 58.7% of the E. faecium strains and 68.3%
of the E. faecalis strains. Other Bac+ strains were
found among E. durans (3 of 8 tested), E. hirae (2
of 5 tested), one E. casseliflavus (only one tested),
and one E. mundtii (only one tested). E. gallinarum
(two tested) and E. avium (only one tested) were
Bac�.
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318304
The Bac+ E. faecium and E. faecalis strains did not
show significantly different inhibitory spectra. Almost
half of the Bac+ Enterococcus strains displayed a very
narrow inhibitory spectrum. For instance, eight en-
terococcal strains exclusively inhibited strains of
Listeria spp., and the inhibitory spectrum of one
Enterococcus strain was limited to the genera Listeria
and Clostridium; two Enterococcus strains inhibited
only Lactococcus spp. Eighteen strains inhibited five
or more of the tested genera. The latter so-called
broad-spectrum inhibitors were equally divided
among the E. faecium and E. faecalis strains; the
only E. mundtii strain (FAIR-E 95) tested also dis-
played a broad inhibitory spectrum. Inhibition of
Listeria was the most prevailing type of antagonism
(59.0% of the Bac+ strains). This was followed by
inhibition of lactobacilli, of which Lactobacillus sakei
was the most sensitive. Related enterococci were
inhibited by 44.0% of the Bac+ strains. Lactococci
and Bifidobacteria were inhibited by 29.0% and
40.0% of the Bac+ strains, respectively. The majority
of the Bac+ strains (71.0%) did not inhibit Lactococ-
cus. Nine enterococci (13.0%) inhibited one or two
Lactococcus strains, while only 12 strains (16.0%)
were able to inhibit all lactococci tested. Among the
spoilage and/or pathogenic bacteria other than Liste-
ria, Clostridium was most sensitive (inhibited by
36.0% of the Enterococcus strains), followed by
Propionibacterium (26.0%) and Staphylococcus
(9.0%). Pediococcus and Bacillus strains were
inhibited only by 8.0% and 1.0% of the Bac+ strains,
respectively. Strains of Leuconostoc and Streptococ-
cus were not inhibited.
3.2. Detection of enterocin structural genes
PCR reactions were performed on total DNA of
the 122 inhibitory Enterococcus strains resulting
from the prescreening. The PCR results are shown
in Tables 4 and 5. They revealed the presence of at
least one enterocin structural gene in 64 strains
(52.5%), further referred to as PCR+ strains:
79.4% of the E. faecium strains, 31.7% of the E.
faecalis strains, and 12.5% of the E. durans strains.
The enterocins A, B, L50A and L50B were exclu-
sively found among E. faecium strains, while enter-
ocin P and bacteriocin 31 structural genes were
detected in strains of both E. faecium and E. durans.
The enterocin AS-48 gene was found exclusively
among E. faecalis strains, whereas cytolysin was
found in E. faecalis strains and in one E. faecium
strain.
Among the PCR+ enterococci, 25 strains (39.1%)
showed a positive signal for one single enterocin, 31
strains (48.4%) were positive for two different enter-
ocins, 7 strains (10.9%) for three distinct enterocins,
and 1 strain (1.6%) was positive for four enterocins.
These data indicate the presence of different enter-
ocin structural genes among several enterococci
(Tables 4 and 5). Sequencing of the PCR amplicons
from the randomly chosen strains FAIR-E 27 (L50A/
L50B, P), FAIR-E 195 (Bac31, P), FAIR-E 210 (P),
FAIR-E 211 (P), FAIR-E 213 (Bac31, P) and FAIR-
E 219 (Bac31, P) confirmed these findings.
The structural gene of enterocin A was detected in
46 E. faecium strains, of which it was unique for only
11 strains. The combination of enterocins A and P
was most frequent (17 strains), followed by the
combination of the enterocins A and B (6 strains).
Other combinations with enterocin A were found for
bacteriocin 31 (4 strains), enterocin P and bacteriocin
31 (4 strains), enterocins B and P (3 strains), and
enterocins B, P, L50A and L50B (1 strain). The
enterocin B structural gene was detected in 9 E.
faecium strains, and was always accompanied by
the enterocin A structural gene. The enterocin P
structural gene was found in 27 E. faecium strains
(twice as the sole enterocin gene) and in E. durans (1
strain). The bacteriocin 31 structural gene never
occurred singly and was found in 8 E. faecium strains
and in E. durans (1 strain). The structural genes of
the enterocins L50A and L50B were detected in 2 E.
faecium strains, once in combination with enterocin P
and once with the enterocins A, B, and P. The
structural gene of enterocin AS-48 was found in 5
E. faecalis strains, twice in combination with the
cytolysin structural gene. The cytolysin structural
gene was detected in E. faecalis (10 strains) and once
in E. faecium, either appearing single (9 strains) or in
combination with enterocin AS-48 (2 strains). Eight
of the broad-spectrum inhibitors mentioned above
contained both the enterocin AS-48 and cytolysin
structural genes.
Among the 64 PCR+ Enterococcus strains, 50
strains were considered Bac+ based on the screening
test, indicating that in 14 PCR+/Bac� strains either no
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318 305
Table 4
Classification of the 72 Bac+ FAIR-E isolates based upon their inhibitory spectra, mentioning the origin and source of the strains, and prevalence of enterocin structural genes and glycopeptide
resistance genes as well as the MIC-values for vancomycin and teicoplanin resistance
Enterococcus Source/origin Inhibitory spectrum*
strain FAIR-E
numberLactococcus
lactis subsp.
lactis (3)a
Lactococcus
lactis subsp.
cremoris (3)b
Lactobacillus
spp. (9)cPediococcus
pentosaceus
(2)d
Leuconostoc
cremoris
(1)e
Streptococcus
thermophilus
(2)f
Enterococcus
faecium (6)g
Inhibitory spectrum restricted to Enterococcus spp.
Enterococcus
faecium 212
Greek Feta
cheese
1
Enterococcus
faecium 213
Greek Feta
cheese
1
Enterococcus
faecium 218
Greek Feta
cheese
4
Enterococcus
faecium 219
Greek Feta
cheese
1
Enterococcus
faecium 220
Greek Feta
cheese
1
Enterococcus
faecalis 255
Italian
Crescenza
cheese
Enterococcus
faecalis 257
Italian
cheese
1
Inhibitory spectrum restricted to other lactic acid bacteria
Enterococcus
faecium 13
Brine of
Greek
Feta curd
1
Enterococcus
faecalis 29
Minipig
feces
Enterococcus
faecalis 43
Italian
shellfish
4
Enterococcus
faecalis 45
Poultry
offals
1
Enterococcus
faecalis 113
Human skin
Enterococcus
faecalis 114
Human
surgical
wound
1
Enterococcus
faecium 202
Greek Feta
cheese
1
Enterococcus
faecium 206
Greek Feta
cheese
1
Enterococcus
faecalis 377
Tuna
intestines
1
Enterococcus
faecalis 381
Poultry
offals
1 1
Enterococcus
hirae 390
Italian
cheese
1
Inhibitory spectrum restricted to Enterococcus spp. and other lactic acid bacteria
Enterococcus
faecium 196
Greek Feta
cheese
1 1
Enterococcus
durans 389
Italian Valtellina
cheese
1 1
Inhibitory spectrum restricted to Enterococcus spp. and spoilage or pathogenic bacteria
Enterococcus
faecium 197
Greek Feta
cheese
6
Enterococcus
faecium 198
Greek Feta
cheese
6
Inhibitory spectrum restricted to Enterococcus spp., other lactic acid bacteria and spoilage or pathogenic bacteria
Enterococcus
faecium 23
Ostrich cecum 1 1 2
Enterococcus
faecium 26
Black olives 1 1
Enterococcus
faecium 27
Minipig feces 1 1 3
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318306
Enterocin Hemolysis Glycopeptide resistance
Enterococcus
faecalis
(6)h
Bifidobacterium
spp. (4)iListeria
spp. (6) jClostridium
spp. (3)kPropionibacterium
spp. (3)lStaphylococcus
carnosus
(1)m
Bacillus
cereus (1)nEscherichia
coli (1)o
structural
genesPhenotype
(MIC vancomycin/
MIC teicoplanin)
Genotype
A, P g
A, P, 31 g
A, 31 g
A, P, 31 g
A, 31 g
2 – g 8/2
1 – g 8/2
A, 31 g
1 – g
– g
– g
1 – g
1 – g
A, P h
A, P h
– g 4/2
2 cytolysin g 4/2
– g
A, P h
1 – g
2 A, P g
3 A, P g
1 5 1 1 A h
1 6 1 A, B g
1 2 3 P, L50A/B g
(continued on next page)
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318 307
Enterococcus Source/origin Inhibitory spectrum
strain FAIR-E
numberLactococcus
lactis subsp.
lactis (3)a
Lactococcus
lactis subsp.
cremoris (3)b
Lactobacillus
spp. (9)cPediococcus
pentosaceus
(2)d
Leuconostoc
cremoris
(1)e
Streptococcus
thermophilus
(2)f
Enterococcus
faecium (6)g
Enterococcus
faecium 31
Minipig feces 1 3
Enterococcus
faecium 34
German sausage 1 2
Enterococcus
faecalis 88
Italian cheese 3 3 5 1
Enterococcus
faecalis 90
Italian cheese 3 3 6 1 3
Enterococcus
faecalis 92
Italian cheese 3 2 6 1 3
Enterococcus
mundtii 95
Italian grass
silage
1 4
Enterococcus
faecium 152
Japanese quail 1
Enterococcus
faecium 170
Belgian silage 1 3
Enterococcus
faecium 171
Belgian cheese 1 2
Enterococcus
faecium 172
Slovakian cow’s
rumen
1
Enterococcus
faecalis 177
Minipig feces 3 3 6
Enterococcus
faecium 178
Minipig feces 1 4
Enterococcus
faecalis 179
Minipig feces 3 3 1 6
Enterococcus
faecalis 256
Italian cheese 3 2 6
Enterococcus
faecalis 259
Italian cheese 1
Enterococcus
faecalis 309
Argentinian
cheese
3 2 6
Enterococcus
faecium 386
Italian Fontina
cheese
1
Enterococcus
faecalis 404
Italian raw
milk
3 2 4
Inhibitory spectrum restricted to other lactic acid bacteria and spoilage or pathogenic bacteria
Enterococcus
faecium 20
Swiss
cheese
1
Enterococcus
faecium 39
Human clinical
isolate
1 1
Enterococcus
faecalis 77
Italian goat
cheese
3 3 5
Enterococcus
faecalis 103
Pig isolate 5
Enterococcus
hirae 110
Human urine 1 3 2
Enterococcus
faecalis 116
Human urine 4
Enterococcus
faecium 119
Human feces 1
Enterococcus
faecalis 124
Human feces 5
Enterococcus
faecalis 125
Human feces 1 5
Enterococcus
faecium 131
Human urine 1
Enterococcus
faecium 132
Human rectum
Enterococcus
faecium 134
Human bile 1 1
Enterococcus
faecium 135
Human blood 1 1
Table 4 (continued)
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318308
Enterocin Hemolysis Glycopeptide resistance
Enterococcus
faecalis
(6)h
Bifidobacterium
spp. (4)iListeria
spp. (6) jClostridium
spp. (3)kPropionibacterium
spp. (3)lStaphylococcus
carnosus
(1)m
Bacillus
cereus (1)nEscherichia
coli (1)o
structural
genesPhenotype
(MIC vancomycin/
MIC teicoplanin)
Genotype
1 6 1 A g
1 1 3 A g
3 3 2 3 1 AS-48 g
2 4 2 3 1 cytolysin, AS-48 h
4 4 2 3 cytolysin, AS-48 h
5 1 6 1 3 – g
2 5 1 A, P g
1 6 1 A, B, P g
1 6 A, B, P g
1 6 A g
6 2 2 cytolysin h
2 6 1 A, B, P g
6 1 2 2 cytolysin g
6 2 1 1 3 1 – g
3 2 – g 4/2
6 2 1 2 3 1 – g
1 5 A, B g
2 2 4 2 1 1 1 AS-48 g
5 1 1 – g
1 1 1 cytolysin g >64/>64 vanA
1 3 2 3 1 AS-48 g
2 1 cytolysin h 2/4
1 1 – g 2/4
2 3 1 cytolysin h
2 2 1 A, B, P, L50A/B g
3 1 cytolysin h
3 3 1 cytolysin h
1 5 1 A, B g >64/32 vanA
1 1 A g >64/32 vanA
1 5 1 A, B g >64/64 vanA
2 5 1 A, B g >64/32 vanA
(continued on next page)
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318 309
or a too low phenotypic expression of the enterocin
genes occurred or resistance genes were present. In
addition, among the 58 PCR� strains, 22 strains were
found Bac+ during the screening, including 4 of the 18
broad-spectrum inhibitors.
3.3. Detection of hemolysis
h-Hemolysis of human blood was observed for E.
faecalis FAIR-E strains 90, 92, 103, 116, 124, 125,
146, and 177, all of which displayed a broad inhibitory
Enterococcus Source/origin Inhibitory spectrum
strain FAIR-E
numberLactococcus
lactis subsp.
lactis (3)a
Lactococcus
lactis subsp.
cremoris (3)b
Lactobacillus
spp. (9)cPediococcus
pentosaceus
(2)d
Leuconostoc
cremoris
(1)e
Streptococcus
thermophilus
(2)f
Enterococcus
faecium (6)g
Enterococcus
faecium 137
Human bile 1 1
Enterococcus
faecalis 146
Horse
Enterococcus
faecium 153
Bizon 1
Enterococcus
faecalis 299
Italian natural
whey
2
Enterococcus
faecalis 335
Irish Cheddar 1 2 1
Enterococcus
faecium 362
Italian Ricotta
cheese
1
Inhibitory spectrum restricted to spoilage or pathogenic bacteria
Enterococcus
durans 1
Greek Feta
curd
Enterococcus
durans 2
Greek yoghurt
Enterococcus
faecium 3
Greek Feta
cheese
Enterococcus
faecium 84
Italian soft
cheese
Enterococcus
faecalis 100
Tick’s blood
Enterococcus
faecalis 109
Human urine
Enterococcus
faecium 121
Human feces
Enterococcus
faecium 201
Greek Feta
cheese
Enterococcus
casseliflavus
323
Irish raw
milk
Enterococcus
faecium
366
Italian
Scarmorza
cheese
a The Lc. lactis subsp. lactis strains were LMG 6890, LMG 7949 and LMG 8522.b The Lc. lactis subsp. cremoris strains were LMG 6897, LMG 9460 and LMG 13563.c The Lactobacillus spp. were Lb. acidophilus LMG 13550, Lb. delbrueckii subsp. bulgaricus LMG 13551, Lb. casei LMG 13552, Lb. curvatus LMG 13553, Lb. fermentum LMG
13554, Lb. helveticus LMG 13555, Lb. plantarum LMG 13556, Lb. reuteri LMG 13557 and Lb. sakei LMG 13558.d The Pediococcus pentosaceus strains were LMG 13560 and LMG 13561.e The Leuconostoc cremoris strain was LMG 13562.f The Streptococcus thermophilus strains were LMG 13564 and LMG 13565.g The Enterococcus faecium strains were LMG 11397, LMG 11423, LMG 14203, LMG 14255 and LMG 15877.h The Enterococcus faecalis strains were LMG 7939, LMG 8222, LMG 11395, LMG 13566, LMG 16216 and LMG 16337.i The Bifidobacterium spp. strains were B. infantis LMG 8811, B. bifidum LMG 11041, B. breve LMG 11042 and B. longum LMG 13197.j The Listeria spp. strains were L. innocua RZS, CTC 1012, CTC 1014, LMG 11387, LMG 13568 and L. ivanovii LTH 3097.k The Clostridium spp. strains were C. sporogenes LMG 13570, C. tyrobutyricum LMG 13571 and C. tyrobutyricum LMG 1285.l The Propionibacterium spp. strains were P. acidipropionici LMG 13572, P. sp. LMG 13573 and P. freudenreichii subsp. shermanii LMG 16424.m The Staphylococcus carnosus strain was LMG 13567.n The Bacillus cereus strain was LMG 13569.o The Escherichia coli strain was LMG 2092.
* Number of sensitive strains out of the total of strains (between brackets) tested.
Table 4 (continued)
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318310
spectrum and also contained the cytolysin structural
gene (Table 4). In the case of E. faecium strains, h-hemolysis was observed for the FAIR-E strains 23,
196, 201, 202, and 206. The four last strains were
derived from Greek Feta cheese and displayed a
narrow inhibitory spectrum. The first strain was of a
nonfood origin and had a broad inhibitory spectrum.
None of these strains contained the cytolysin structural
gene. No hemolytic activity was observed for any of
the other strains tested.
Enterocin Hemolysis Glycopeptide resistance
Enterococcus
faecalis
(6)h
Bifidobacterium
spp. (4)iListeria
spp. (6) jClostridium
spp. (3)kPropionibacterium
spp. (3)lStaphylococcus
carnosus
(1)m
Bacillus
cereus (1)nEscherichia
coli (1)o
structural
genesPhenotype
(MIC vancomycin/
MIC teicoplanin)
Genotype
1 3 1 A, B g >64/32 vanA
2 1 cytolysin h
5 1 A g
2 1 1 – g 4/2
2 3 3 1 1 – g
5 A, P g 4/2
6 P, 31 g
6 – g
6 A, 31 g
1 A, P g >64/>64 vanA
1 – g 2/4
1 – g
1 1 A, P g
1 A, P h
1 – g vanC2
5 A, P, 31 g 4/2
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318 311
Table 5
Characteristics of the 50 FAIR-E strains (Bac�) that showed no inhibition towards any of the 52 indicator strains used, presence of structural
genes and glycopeptide resistance genes as well as the MIC-values for vancomycin and teicoplanin resistance
Enterococcus strain Source/origin Enterocin Hemolysis Glycopeptide resistance
FAIR-E number structural
genesPhenotype (MIC vancomycin/
MIC teicoplaninn)
Genotype
Enterococcus faecium 4 Greek Feta cheese A g
Enterococcus faecium 24 Pharmaceutical product – g
Enterococcus avium 28 Minipig feces – g
Enterococcus faecium 56 Reygrass silage – g 4/2
Enterococcus faecium 76 Italian soft cheese A g
Enterococcus faecalis 112 Urine – g 2/4
Enterococcus faecalis 115 Urine – g
Enterococcus faecalis 117 Urine – g 2/4
Enterococcus faecium 118 Feces A, P g
Enterococcus faecalis 122 Feces – g 4/2
Enterococcus faecalis 123 Feces – g
Enterococcus durans 139 Chicken intestine – g
Enterococcus durans 140 Belgian Cheddar cheese – g
Enterococcus durans 143 Unknown – g >64/32 vanA
Enterococcus faecalis 144 Pig’s tonsil – g
Enterococcus faecalis 145 Animal waste – g
Enterococcus faecalis 147 Horse – g
Enterococcus faecalis 148 Pig – g
Enterococcus faecium 149 Pig’s heart – g
Enterococcus faecium 150t1 Belgian goat cheese A, P g
Enterococcus faecium 150t2 Belgian goat cheese A g
Enterococcus hirae 165 Pigeon – g 32/16
Enterococcus gallinarum 187 Faeces – g 8/2 vanC1
Enterococcus gallinarum 194 Unknown – g 8/2 vanC1
Enterococcus faecium 195 Greek Feta cheese A, P, 31 g
Enterococcus faecium 203 Greek Feta cheese A, P g
Enterococcus faecium 207 Greek Feta cheese A, P g
Enterococcus faecium 208 Greek Feta cheese A, P g
Enterococcus faecium 209 Greek Feta cheese A, P g
Enterococcus faecium 210 Greek Feta cheese P g
Enterococcus faecium 211 Greek Feta cheese P g
Enterococcus faecium 214 Greek Feta cheese – g
Enterococcus faecium 215 Greek Feta cheese – g
Enterococcus faecium 216 Greek Feta cheese – g
Enterococcus faecium 217 Greek Feta cheese – g
Enterococcus faecium 222 Greek Feta cheese A g
Enterococcus faecium 223 Greek Feta cheese – g
Enterococcus faecium 227 Irish Cheddar cheese – g
Enterococcus durans 231 Irish Cheddar cheese – g
Enterococcus hirae 240 Greek cheese – g
Enterococcus faecium 244 Sardinian cheese – g
Enterococcus faecium 246 Unknown A g
Enterococcus faecalis 260 Italian Fontina cheese – g
Enterococcus faecium 266 Starter culture – g 4/2
Enterococcus faecalis 298 Natural whey – g 4/2
Enterococcus durans 332 Italian Fontina cheese – g
Enterococcus hirae 360 Irish semi-soft cheese – g
Enterococcus faecalis 375 Italian Venaco cheese – g
Enterococcus faecalis 378 Unknown – g 4/2
Enterococcus faecium 402 Tuna intestine – g
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318312
3.4. Detection of glycopeptide resistance
Using the broth dilution technique, MIC values for
vancomycin and teicoplanin were determined. The
results are represented in Tables 4 and 5, together
with the results of the multiplex PCR reactions. The
vanA genotype has been detected in 8 strains of which
7 strains were E. faecium (six of human origin and one
food isolate) and 1 strain was E. durans. None of the
41 E. faecalis strains was positive for vanA. In all
cases, the vanA genotype resulted in a vancomycin
and teicoplanin resistance phenotype with MIC values
above 64 Ag/ml. None of the Enterococcus spp.
isolates was positive for vanB. Both E. gallinarum
strains tested were positive for the vanC1 gene cluster.
Phenotypically, these strains showed moderate resist-
ance to vancomycin (8 Ag/ml) but they were sensitive
to teicoplanin (2 Ag/ml). The only E. casseliflavus
strain tested, which was derived from Irish raw milk,
was positive for the vanC2 gene cluster. This strain
did not show any phenotypical resistance towards
either vancomycin or teicoplanin. All other strains
had MIC values of 2 Ag/ml for both antibiotics and no
van genes were detected.
4. Discussion
Enterococci play an important role in the ripening
of certain traditional cheeses from Mediterranean
countries, and are also marketed as probiotic prepa-
rations in health care (Franz et al., 1999a). Further-
more, enterococci are well known for their production
of bacteriocins, so-called enterococcins or enterocins
that inhibit other bacteria, including several food
spoilage and pathogenic bacteria, e.g. Listeria and
Clostridium (Giraffa, 1995). Enterococci are therefore
interesting additional starter cultures or protective
cultures for cheese manufacture and for the prepara-
tion of novel probiotics (Parente et al., 1989; Centeno
et al., 1996; Coppola et al., 1988; Elmer, 2001;
Foulquie Moreno et al., 2002; Sarantinopoulos et al.,
2002). However, severe safety criteria must be estab-
lished to guarantee a safe, commercial use of enter-
ococci. Considering their clinical involvement in
infections and antibiotic resistance (Murray, 1990;
Jett et al., 1994; Morrison et al., 1997), the safety of
E. faecium and E. faecalis strains associated with food
fermentations and probiotics is being questioned.
Therefore, the bacteriocin type produced and the
presence of hemolytic substances and vancomycin
resistance must be evaluated, in particular with respect
to the introduction of novel, commercial cultures.
Bacteriocin production was mainly found among
the strains of E. faecalis (68.3%) and E. faecium
(58.7%) included in this study. Both species encom-
passed strains of different and geographically well
spread origin covering food isolates (38 strains,
mainly from cheese) and 32 strains of animal origin
(from at least 10 different animals) and human origin
(both clinical and nonclinical isolates). These findings
corroborate other studies showing that, among Enter-
ococcus strains of nonfood origin, E. faecalis displays
the highest bacteriocinogeny (Du Toit et al., 2000; Del
Campo et al., 2001). A remarkable variation of
inhibitory spectra occurred among the E. faecium
and E. faecalis strains tested (Table 4), including
inhibition of, for instance, only closely related enter-
ococci, other LAB or food spoilage and/or pathogenic
bacteria. No correlation was found between the origin
of the strains and the inhibitory spectrum. This may be
due to the ubiquitous nature and persistence of enter-
ococci. Indeed, fecal and environmental contamina-
tion leads to a widespread prevalence of enterococci
making it difficult to trace back the origin of a strain.
In general, strains involved in food fermentations
probably originate from the human or animal GIT,
which is believed to be the principal source of enter-
ococci (Murray, 1990). Remarkably, a clustering of
human isolates from both fecal and clinical origin was
observed in the group of strains inhibiting LAB,
Listeria, and either Staphylococcus or Clostridium.
The variation in inhibitory spectra may be due to
several antagonistic factors, among which the produc-
tion of the known enterocins A and B (Aymerich et
al., 1996; Casaus et al., 1997), P (Cintas et al., 1997),
31 (Tomita et al., 1996), and CRL35 (Farıas et al.,
1996), as well as the production of AS-48 (Martınez-
Bueno et al., 1994), or cytolysin (Booth et al., 1996;
Cintas et al., 1998). Remarkably, the chromosomally
located enterocins A and B were only found among
the E. faecium strains tested. The plasmid-encoded
enterocins AS-48 (Martınez-Bueno et al., 1994; Joos-
ten et al., 1997) and L50A and L50B (Cintas et al.,
1998) were detected among various strains of E.
faecalis and E. faecium, respectively. Chromosomal
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318 313
localization of enterocin genes can be described as an
intrinsic feature, while plasmid localization will be the
result of acquired antibacterial potential through con-
jugal gene transfer.
The structural gene of enterocin A is widely dis-
tributed among E. faecium strains, whereas that of
enterocin B always occurs in the presence of enterocin
A. This is most probably due to the fact that no
transport genes have been found for enterocin B
production (Franz et al., 1999b). Assuming that these
genes were lost as a result of several mutations, one
may hypothesize that the structural gene of enterocin
B was lost by several strains as well, resulting in the
observation that the structural gene of enterocin A
occurs solely in some strains. This had no significant
impact on the inhibitory spectrum as observed in this
study. In contrast, Casaus et al. (1997) report on the
different target specificity and synergistic action of
enterocins A and B. In addition, all E. faecium strains
possessing the enterocin B structural gene belonged to
the same subcluster of the genomic group I of E.
faecium, except for E. faecium FAIR-E 119 (Vancan-
neyt et al., 2002). Besides enterocin A, a high prev-
alence was seen for enterocin P and bacteriocin 31
among E. faecium and E. durans strains. Whereas
cytolysin (Booth et al., 1996) and enterocin AS-48
(Galvez et al., 1989) were originally found in clinical
isolates of E. faecalis, they are also found in strains
from other sources including foods (Joosten et al.,
1996, 1997; Maisnier-Patin et al., 1996) as was
confirmed by this study. Hence, no relationship can
be established between the presence of enterocin
structural genes and the origin of the strain, given
their widespread distribution, probably due to their
possible transfer and acquisition between strains.
Moreover, no correlation seemed to exist between
the presence of known enterocin genes and the activ-
ity spectra of these enterococci.
The detection of enterocin structural genes does
not imply the production of the corresponding bacter-
iocin. Lack of gene expression, for instance due to the
absence of (the induction of) transcription (Nes et al.,
1996), novel enterocins, and the occurrence of multi-
ple bacteriocin resistance genes (Eijsink et al., 1998)
may further contribute to wide differences in inhib-
itory spectra among strains of the same genus as
observed in this study. As an example, in the case
of the enterocins A and B, both constitutive and
regulated production is reported (Nilsen et al., 1998;
Franz et al., 1999b). It is also noteworthy that a clear-
cut relationship between the structure of an enterocin
and its inhibitory spectrum is not clearly understood.
For instance, an anti-Listeria activity is hypothetically
explained by the presence of a conserved amino acid
sequence motif among the class IIa bacteriocins
(Nieto-Lozano et al., 1992). In addition, the presence
of one or more disulfide bonds could be responsible
for the nature of the inhibitory spectrum (Callewaert et
al., 1999; Ennahar et al., 2000). However, other
researchers have shown that the C-terminal part of a
bacteriocin is likely responsible for variations in the
inhibitory spectrum (Fimland et al., 1996), whereas
others indicate the importance of electrostatic inter-
actions between the bacteriocin molecules and the cell
envelope of the target strains (Bhugaloo-Vial et al.,
1996; Chen et al., 1997).
Importantly, enterocins show a strong activity
towards Listeria, which can be of practical use in
the food industry (Parente and Hill, 1992; Giraffa,
1995; Giraffa et al., 1995; Nunez et al., 1997; Galvez
et al., 1998). Therefore, Enterococcus strains display-
ing a limited inhibitory spectrum due to the produc-
tion of enterocins targeted towards Listeria and/or
Clostridium (Torri Tarelli et al., 1994; Giraffa, 1995;
Franz et al., 1996; this study) would be interesting as
protective cultures for cheese manufacture, given their
very limited antagonistic activity towards dairy starter
cultures such as Lactococcus and Streptococcus
(Foulquie Moreno et al., 2002; Sarantinopoulos et
al., 2002). This would also be of interest when
considering Enterococcus strains as cocultures for
enhanced ripening of cheeses.
Finally, these Enterococcus strains, in particular
those with broad-spectrum activity, must be checked
carefully for the presence of hemolysins/cytolysins.
Cytolysin activity is seen to be a potent virulence
factor in several animal model studies (Ike et al.,
1984; Jett et al., 1992; Chow et al., 1993), and it
plays an important role in the severity of human
infections (Huycke et al., 1991; Jett et al., 1994).
Cytolysin expression goes hand in hand with hemol-
ysis. The incidence of h-hemolysis was not restricted
to E. faecalis strains, but also occurred in E. faecium.
It occurred in strains both from food and nonfood
origin. However, in h-hemolytic E. faecalis strains the
cytolysin structural gene was always present, while in
L. De Vuyst et al. / International Journal of Food Microbiology 84 (2003) 299–318314
E. faecium this gene could not be detected. So, the
hemolysis of the latter strains must be caused by
another cytotoxic component. In two strains of E.
faecalis and in one strain of E. faecium, the cytolysin
structural gene was present, but no h-hemolysis
occurred. It can be hypothesized that cytolysin was
not expressed and that instead another (novel) enter-
ocin or antibiotic substance was responsible for the
inhibition. In general, the incidence of h-hemolysis is
lower for E. faecium strains than for E. faecalis
strains. However, absence of hemolytic activity
should be a selection criterion for (bacteriocin-pro-
ducing) starter strains for dairy use (Giraffa, 1995);
nevertheless, absence of hemolytic activity in enter-
ococci isolated from food does not mean that these
bacteria are nonvirulent (Franz et al., 1999a). A
thorough understanding of all characteristics will
certainly contribute to the safety evaluation of enter-
ococci. Interestingly, apparently no single virulence
factor in Enterococcus by itself can convert a harmless
strain into a pathogen (Gasson and Eaton, 2001).
However, strains that are used in the food industry
as starter cultures might acquire virulence factors in
vitro from strains isolated as nosocomial pathogens in
clinical settings (Gasson and Eaton, 2001).
In this study, the incidence of the vanA gene among
E. faecium strains was low (11.1%) and only occurred
in one food isolate. It did not occur in E. faecalis. In a
study of European cheeses, Teuber et al. (1999) also
reported a low (4%) incidence of VRE. Giraffa and
Sisto (1997) did not find VRE among strains isolated
from Italian cheeses in the period 1980–1990;
remarkably, high frequencies of VRE occurred in
cheeses produced more recently (Giraffa et al.,
2000). In contrast, high frequencies of VRE are found
in meat (Wegener et al., 1997; Quednau et al., 1998;
van den Braak et al., 1998; Son et al., 1999). Food of
animal origin is thought to be the most likely route of
transmission of VRE from the animal reservoir to
humans (Klare et al., 1995).
In conclusion, whether interesting Enterococcus
strains, in particular bacteriocin producers, are safe
for use as starter or protective cultures in the produc-
tion of fermented foods and as probiotics is clearly
strain specific. Each strain has to be tested for the
different traits that contribute to its safety evaluation
such as hemolysin/cytolysin activity and vancomycin
resistance. However, based on their lower incidence
among E. faecium strains in this study, it would be
advisable that bacteriocin-producing strains of this
species are used rather than E. faecalis strains. This
is especially valid taking into account the fact that
pheromone-responsive plasmids, which often encode
virulence genes, and antibiotic resistance genes are
mainly carried by E. faecalis (Clewell, 1990; Chow et
al., 1993; Wirth, 1994; Singh et al., 1998).
Acknowledgements
This study was carried out with the financial support
from the Commission of the European Communities’
Agriculture and Fisheries (FAIR) specific RTD pro-
gramme (CT97-3078, Enterococci in Food Fermenta-
tions: Functional and Safety Aspects). It does not
necessarily reflect its views and in no way anticipates
the Commission’s future policy in this area. The
authors are grateful to the different groups of the EU
consortium for their involvement in the prescreening of
the FAIR-E collection of enterococci, in particular Nele
Berthels (VUB, Brussels, Belgium), Prof. Dr. G.
Kalantzopoulos and Prof. Dr. E. Tsakalidou (Agricul-
tural University of Athens, Athens, Greece), Prof. Dr.
K. Kersters and Dr. M. Vancanneyt (University of
Gent, Gent, Belgium), Prof. Dr. J. Huis in’t Veld and
Dr. S. Biesterveld (University of Utrecht, Utrecht, The
Netherlands), Prof. Dr. W. Holzapfel and Dr. C. Franz
(Federal Research Center for Nutrition, Karlsruhe,
Germany), Prof. Dr. F. Dellaglio and E. Knijff
(University of Verona, Verona, Italy), Dr. T. Cogan
and Dr. M. Rea (Teagasc, Fermoy, Ireland), and Dr. A.
Lombardi and C. Andrighetto (Istituto per la Qualita e
la Tecnologie Agroalimentari, Thiene, Italy). The
authors further acknowledge their finances from the
Research Council of the Vrije Universiteit Brussel and
the Fund for Scientific Research Flanders. M.R.
Foulquie Moreno was recipient of a Marie Curie
Fellowship from the European Commission (grant
FAIR CT97-5013).
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