rh lecture 4 slides. oxidation and reduction as it pertains to biochemistry

27
rh Lecture 4 Slides

Upload: tamsyn-farmer

Post on 12-Jan-2016

223 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

rh

Lecture 4 Slides

Page 2: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Oxidation and

Reductionas it pertains to biochemistry

Page 3: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Read The Slow Burn

please read

Page 4: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

fig 13-22

Page 5: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

fig 13-22

Page 6: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

fig 13-23

reduction potentialcan be measured

testcell

ref.cell

Page 7: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Redox reactions as pairs of half-reactions

Fe2+ + Cu2+Fe3+ + Cu+

The half-reactions:

Fe3+ + e- Fe2+

Cu2+ + e- Cu+ E'o = -.18

E'o = .77

always reductions!rh

Page 8: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Energetics calculated from half-reactions

Fe2++ Cu2+Fe3+ + Cu+

Cu2+ + e-Cu+ E'o =.18

what is E'o for this reaction ?

E'o = (.18 +.77)

rh

Fe2+ + Cu2+Fe3+ + Cu+

Fe3+ + e- Fe2+ E'o = .77

Page 9: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

rh

Page 10: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

DG'o = -nFE'o

one confusing thing: by the convention, positive E means spontaneous reaction… or negative DG.

relationship between free energy and reduction potential

rh

Page 11: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Energetics calculated from half-reactions

Fe2++ Cu2+Fe3+ + Cu+

Cu2+ + e-Cu+ E'o = .18

what is E'o for this reaction ?

E'o = 0.95

rh

Fe2+ + Cu2+Fe3+ + Cu+

Fe3+ + e- Fe2+ E'o = .77

Page 12: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

rh

DG'o = -nFE'o

nFE'o

Page 13: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

glucose

Fe2+ + Cu2+ Fe3+ + Cu+

familiar from earlier chemistry classes…

BUT WHAT ABOUT SOMETHING LIKE THIS?:

rh

Page 14: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Oxidation of a "model" sugar molecule: CH2O

glucose

general:

let's make n=1, to aid understanding

rh

Page 15: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Oxidation of a "model" sugar molecule: CH2O

1) removal of electrons from sugar

rh

Page 16: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Oxidation of a "model" sugar molecule: CH2O

2) reduction of oxygen

rh

Page 17: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

Oxidation of a "model" sugar molecule: CH2O

3) production of CO2

rh

Page 18: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry
Page 19: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry
Page 20: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

TO

PM

IDD

LE

BO

TT

OM

Table of Standard Reduction Potentials

Page 21: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

fig 13-24

NAD+ and NADH

Page 22: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

The business end of NAD and NADP

this moiety is from the vitamin niacinrh

Page 23: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

this moiety is from the vitamin niacinrh

moi·e·ty (moi-t)n.One of two or more parts into which something may be divided, such as the various parts of a vitamin or molecule.

?

Page 24: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

table 13-8

Page 25: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

fig 13-27

FAD and FADH2 (and FMN and FMNH2)

Page 26: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

rh

The business end of FAD or FMN

this moiety is from the vitamin riboflavin

isoalloxazinering

Page 27: Rh Lecture 4 Slides. Oxidation and Reduction as it pertains to biochemistry

fig 13-9