research infrastructure of biobank sweden
TRANSCRIPT
Sonja EakerChair. Preparatory group of Biobank Sweden
Chef Regional biobank centre Uppsala Örebro region
Research
Infrastructure of
Biobank SwedenTobias Sjöblom
Director, Research Infrastructure of Biobank SwedenDirector, BBMRI.se
Start-up phase (2018-2019)
It takes a lot of meetings to re-establish trust and get to work
Steering Group
NBR/Nat Adv Board
WG-1
WG-2
Service co-ordinators
2018
J F M A J J A S O N DM
2017
J F M A J J A S OM N D
2016
MJ F M A J J A S O N D
Deliverables and achievements (selected)
• Organization established and operational at the national as well as local level.
• Key roles recruited and delivering results.
• Financial administration and travel support operational.
• Reporting of activities and output established.
• Local actions to support sample output supported.
Stretch goal:
• Sweden contributed 10% of all CRC cases in the pan-EuropeanBBMRI ERIC ADOPT project.
Sample output from the participating service facilities (2018)
NodeBiobank
staff (FTE)
Blood sample output Tissue sample output
Projects Donors Vials Projects Donors Specimens
Skåne 23.2 139 23346 152983 69 103 4456
Göteborg 24 20 7823 8369 62 3073 3575
Linköping 8 9 3400 9400 27 574 1777
Örebro 4.4 13 3368 7155 21 2932 6395
Uppsala 22.8 20 3028 7238 49 2979 9777
Stockholm 72 61 65097 99414 179 14035 45790
Umeå 23.5 10 8562 11422 11 2488 2497
Total 178 272 114624 295981 418 26184 74267
Biobank Service Facilities at partner universities and healthcare providers (2018). In 2018, the universitiescontributed 31 MSEK, healthcare authorities 68 MSEK, and user fees 35 MSEK (26%) to thebiobank service facilities.
All partner biobanks are now actively providing samples to research, and the total blood sampleoutput to research was 295 981 vials which is double the output of 144 926vials recorded in 2016.
Government spending on biobank infrastructure
(connected with their BBMRI node, EUR/capita in 2019)
0,000,050,100,150,200,250,300,350,400,450,50
Governance in Biobank Sweden vs other EU countries
• 14/20 BBMRI nodes responded
• SE is a resource rich network-like node (NO, BE, DE, NL).
• Top governance groups predominantly national champions/ infrastructuremanagers, similar to BBMRI.se (2010-16).
• Few have representatives of the stakeholding institutions.
• No representation from healthcare providers (except CH).
• Governance structures more similar to BBMRI.se (2010-16) than to Biobank Sweden.
Who are the users of Biobank Sweden?
Users
Acad. Comm. Care MaleFe-
maleN/A Nat.
Inter-
nat.N/A
Basic
med.
Clinical
med.
Health
science
Bio-
techn.Other N/A
Skåne 64 6 57 63 64 0 119 8 0 0 123 0 4 0 0Göteborg 68 10 4 15 5 62 82 0 0 5 12 3 0 0 62Linköping 28 1 7 21 15 0 36 0 0 13 23 0 0 0 0Örebro 29 5 0 23 11 0 25 9 0 28 5 1 0 0 0Uppsala 50 19 0 36 33 0 49 0 20 5 60 3 0 1 0Stockholm 276 54 43 38 22 313 330 3 40 10 40 282 0 1 40Umeå 21 0 0 8 13 0 0 0 21 18 3 0 0 0 0
Total 536 95 111 204 163 375 641 20 81 79 266 289 4 2 102
NodeUsers Users Users
Users of Biobank Sweden. A total of 742 users relied on services from the Service Centers
participating in BIS during 2018.
Progress in local integration of biobank services at participating universities and
regions during 2016-2018
1. Agreement 2. Steering Group 3. Node-coordinator 4. Full integrationUmeå 3Uppsala 4Örebro 4Linköping 4Sthlm 3Göteborg 4Skåne 3
Status of national integration at end of 2018NodeIntegration
level
Full scale phase (2020-2026)
Revised organization from 2020
Major changes
• Revised organization
• Increased administrative support to WG1 and for web/communications
• All projects report to a Working Group
• IT projects planned and re-prioritized
• Substantial support for local implementation of national IT systems vs. increased sample output support.
• The national coordination projects are less bottom-up and more integrated with the governance model.
Areas of responsibilityfor national collaboration
WG Node Area of responsibility for national
collaboration
Scope Module
1, 2 Umeå Cohort enhancement and
exploitation
Development and local implementation of effective national solutions for
data re-use and tracking of analytical data in large cohorts. Evaluation of
existing cohorts for compatibility with current analysis methods.
Implementation of policy for return of results. Support to other nodes for
national implementation of data re-use.
7
2 Uppsala Healthcare integrated blood
biobanking
Support for implementation, development and upkeep of the national
program for healthcare integrated blood biobanking (SIB).
2 and 8
1 Uppsala Biobank Ethics and Law Provisioning of qualified legal advice in the field of biobank law as needed
by BIS. Participation in BBMRI ERIC Common Service ELSI.
2 and 5
1,2 Stockholm
/Uppsala
IT strategy Coordination, development and implementation of National IT strategy.
Shared responsibility between Stockholm (IT strategist and coordinated IT
system manager) and Uppsala (IT project manager).
7
2 Stockholm Large scale sample
processing
Actions to enable and facilitate national use of unique sample processing
resources (DNA/RNA extraction and reformatting) primarily available at KI
Biobank.
9
2 Örebro Cytology biobanking Maintenance and development of cytology biobanking in gynaecological
and non-gynaecological cancers.
8
1 Linköping Education and Dissemination Support continuously updated training catalogue. Co-ordination of planning
of freezer capacity for distributed blood biobanking in Swedish healthcare
systems.
6, 8
2 Göteborg Sample quality Evaluation of existing cohorts for compatibility with current analysis
methods. Optimization of national sample handling systems and workflow
by evaluating the impact of preanalytical factors.
6
2 Lund/
Skåne
Tissue biobanking Development and support for national implementation of distributed tissue
biobanking for cancer research. Development of national harmonization
actions in pathology biobanking.
8
Work packages
4
11,8 15,2
5,6 9,1 1,1
139
5,5
3
Areas of improvement
Organization
• Link between steering committee members and local biobank service facilities is key for the governance model to work. Thismitigates the ’top-down’ sensation for some local managers.
• Involving KOLs in the governance of BIS in a constructíve way.
International
• Increased Nordic and European collaboration.
Att belöna
Tack!
• alla ni som bygger och är Biobank Sverige…
• medborgarna och deras folkvalda som ger oss förtroende…
• våra användare…
• och våra externa finansiärer: