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TRS6 (01/18) RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH SCHEME (TRS) Completion Report on Funded Project Project start date: 1/1/2013 Project completion date: 31/12/2018 1. Project Title: Functional analyses of how genomic variation affects personal risk for degenerative skeletal disorders 2. Names and Academic Affiliations of Project Team Members # Project team member Name / Post Unit / Department / Institution Average number of hours per week spent on this project in the whole project period Project Coordinator (PC) Cheah, Kathryn SE /Chair Professor School of Biomedical Sciences##, HKU 11 hours Co-Principal Investigator(s) Chan, Barbara /Asso. Professor^^ Mechanical Engineering HKU 9 hours Chan, Danny/ Professor School of Biomedical Sciences##, HKU 9 hours Cheah, Kathryn SE /Chair Professor School of Biomedical Sciences##, HKU 11 hours Cheung, Kenneth MC/Professor Orthopaedics & Traumatology (O&T), HKU 4.5 hours Jin, Dong Yan/ Professor School of Biomedical Sciences##, HKU 4.5 hours Project number:T12-708/12N Lam, Yun Wah /Asso. Professor Biology & Chemistry, City U 9 hours Lian, Qizhou$ /Asst. Professor Medicine, HKU 9 hours Luk, Keith DK/ Chair Professor O&T, HKU 4.5 hours Sham, Pak /Chair Professor Psychiatry/Genomic Centre HKU 4.5 hours Zhang, Michael /Chair Professor Psychiatry/School of Biomedical Sciences##, HKU& UT Dallas USA 2 hours

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Page 1: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

TRS6 (01/18)

RESEARCH GRANTS COUNCIL

THEME-BASED RESEARCH SCHEME (TRS)

Completion Report on Funded Project

Project start date: 1/1/2013

Project completion date: 31/12/2018

1. Project Title: Functional analyses of how genomic variation affects personal risk for

degenerative skeletal disorders

2. Names and Academic Affiliations of Project Team Members#

Project team

member Name / Post

Unit / Department /

Institution

Average number

of hours per week

spent on this

project in the

whole project

period

Project

Coordinator (PC) Cheah, Kathryn SE

/Chair Professor School of Biomedical

Sciences##, HKU 11 hours

Co-Principal

Investigator(s)

Chan, Barbara

/Asso. Professor^^ Mechanical Engineering HKU 9 hours

Chan, Danny/

Professor School of Biomedical

Sciences##, HKU 9 hours

Cheah, Kathryn SE

/Chair Professor School of Biomedical

Sciences##, HKU 11 hours

Cheung, Kenneth

MC/Professor

Orthopaedics & Traumatology

(O&T), HKU 4.5 hours

Jin, Dong Yan/

Professor

School of Biomedical

Sciences##, HKU 4.5 hours

Project number:T12-708/12N

Lam, Yun Wah

/Asso. Professor Biology & Chemistry, City U 9 hours

Lian, Qizhou$

/Asst. Professor Medicine, HKU 9 hours

Luk, Keith DK/ Chair

Professor O&T, HKU 4.5 hours

Sham, Pak

/Chair Professor

Psychiatry/Genomic Centre

HKU 4.5 hours

Zhang, Michael

/Chair Professor

Psychiatry/School of

Biomedical Sciences##,

HKU& UT Dallas USA

2 hours

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Co-Investigator(s)

Cherny, Stacey$

/Asst. Professor Psychiatry, HKU 1.5 hours

Huang, Jian Dong

/Professor School of Biomedical

Sciences##, HKU 2 hours

Ng, Ray

/Asst. Professor School of Biomedical

Sciences##*, HKU 2 hours

Samartzis, Dino$

/Asst. Professor O&T, HKU 4.5 hours

Song, Y.Q.

/Asso. Professor

School of Biomedical

Sciences##, HKU 2 hours

Wang, Junwen^

/Asst. Professor

Centre for Genomic Science,

HKU 2 hours

Collaborators

Ikegawa, S.

/Laboratory Head Center for genomic Medicine

RIKEN, Japan N.A.

Karpinnen, J.

/Professor

Physical Medicine and

Rehabilitation, Univ. of Oulu,

Finland N.A.

Liu, P./Senior Group

Leader

Wellcome Trust Sanger

Institute, Cambridge, UK** N.A

Mannikko, M.

/Adjunct Professor

Institute of Biomedicine, Univ.

of Oulu, Finland N.A

Rajasekaran, S.

/Chairman

Dept of Orthopaedics & Spine

Surgery Ganga Medical Centre

& Hospitals, India

N.A

Zeggini, E.

/Group Leader

Wellcome Trust Sanger

Institute, Cambridge, UK N.A

Faessler, R & Mann, M/

Professors & Directors

Max Planck Inst Martinsreid,

Germany N.A

Overall, C./

Professor, Canada

Dept. Oral Biological &

Medical Sciences, Univ.

British Columbia, Canada

N.A

Stupp, S./Professor &

Director

Inst. BioNanotechnology in

Medicine, Northwestern

University, USA N.A

#Nieto, A. /Professor &

Head of Dept.

Instituto de Neurociencias

CSIC-UMH

N.A

# Please highlight the approved changes in the project team composition and quote the date when

the RGC granted approval of such changes. For changes in the project team composition, please

submit a separate request, together with the justification and the curriculum vitae of the new member(s), to the RGC three months prior to the intended effective date of the change. ^^ Currently Professor

*Formerly affiliated with Dept. of Pathology, HKU

** Currently Professor of School of Biomedical Sciences, HKU

## Formerly Biochemistry, HKU

^left HKU and the team on 15 April 2016. His share of work has been taken up fully by Prof Pak

Sham and Prof. Michael Zhang and a new postdoctoral fellow.

$left HKU recently and continue their support on the project. Latest affiliations are as follow:1. Dr Qizhou Lian: Scientific Officer and Manager, HKUMed GMP laboratory of AdvancedCellular Therapeutics LKS faculty of Medicine, HKU (Effective Date: February 2019)2. Dr. Stacey Cherny: Senior Researcher - Epidemiology and Preventive Medicine, Tel AvivUniversity, Israel. (Effective Date: September 2017)3. Dr. Dino Samartzis: Associate Professor, Department of Orthopaedic Surgery RushUniversity, Chicago, USA (Effective Date: January 2018)

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3. Project Objectives

Summary of objectives addressed/achieved:

Objectives* Percentage

achieved Remarks**

1. To understand the

molecular pathology

and progression of

disc degeneration

100% Insights into IVD development and degeneration gained from

mouse mutants and mouse models for IDD (ER stress model;

disc compression via tail looping; poor healer

mice) established; transcriptome data on developing/postnatal

mouse nucleus pulposus (NP). Elucidated molecular

mechanism for impact of cellular/ER stress on hypertrophic

chondrocyte (HC) differentiation and cell survival; roles of

cell-cell and cell-matrix interactions; cell-cycle regulation;

contribution of HCs to inner annulus fibrosus and their

potential role in IVD recovery from compression injury.

Mouse IDD scoring system published.

TGFβ, stress pathway, N-cadherin, β1 integrin implicated in

mouse IVD development and IDD. Developmental profile of

mouse notochord and NP cells RNAome. Molecular

signatures (RNAome) of constituent populations of human

NP, definition of notochordal-like (NCL) and chondrocyte-

like (CLC) cells in non degenerated NP, and of populations in

degenerated NP. Evidence for transformation of NCL to CLC

to fibroblasts in injury-induced IDD.

Comparative analyses of transcriptomes of human

degenerated and non-degenerated NP at single cell resolution

reveal massive changes in cell populations, evidence for

transformation of NCLs to CLCs and fibroblasts; cytokine-

cytokine receptor, TGFβ pathway, cell-matrix interactions and

inflammatory pathways and mineralisation implicated;

integrated stress response and partial EMT process implicated

as early in etiology, culminating in fibrosis and IDD. HOPX

identified as a master regulator for maintaining NCL identity.

Produced deep proteome of mouse IVD in lumbar and tail

regions; reference spatial proteome of human lumbar discs in

young (healthy) and aged (degenerated) individuals.

Comparative SILAC proteome of human IVD samples, in

relation to the secretome and degradome. Towards therapy:

showed small molecule inhibition of the ISR and chemical

chaperone alleviates growth plate and osteoblast

differentiation defects caused by ER stress, with exciting implications for the treatment of congenital dwarfism/bone overgrowth associated with cellular stress. Two patent applications filed. Papers published, media coverage.

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2. To correlate IDD

severity and

progression with

genetic variations

100% Follow-up MRI finished. Improved IDD phenotyping and

classification; UTE-MRI publications. Characterized

longitudinal progression of IDD sub-phenotypes over time

from loss of signal intensity or disc bulging to other changes,

and from one level to the next; Combined analysis of genomic

and metabolomics data indicating influence of blood lipid

related genetic variants on lumbar modic changes, suggesting

the interplay of local and systemic factors in IDD progression.

Papers in preparation.

3. To discover the

functional

implications of

genomic risk loci.

100% Novel risk factors identified from genomic and genetic studies

in SMJ and LGJ mice. Mouse models for IVD implicated

aberrant TGFb signaling caused by over-expression of ASPN,

a genetic risk factor, via disruption of fibrillin network leading

to chondrogenic and fibrotic events. Papers published.

4. To identify key

intrinsic and extrinsic

niche factors for the

differentiation of disc

cells from pluripotent

stem cells and for

their maintenance

100% Mouse: Integrated transcriptome and epigenetic data revealed

dynamic shift in pathway prominence from notochord to NP.

Single cell RNAseq (scRNAseq) revealed cell transition states

and heterogeneity in HC-to-osteoblast transition. Validated

similarity of chordoma cells to notochordal-like cells NCLs.

Identified potential stem cell/progenitors in mouse IVD.

Showed HOPX is master factor for maintaining NCL identity.

Papers in preparation.

5. To develop a cellular

platform for

maintaining disc cells

and for tests of disc

cell function

100% Ex vivo system recapitulated notochord to NP transition for

functional studies. 3D segment culture and tube co-culture

demonstrated the significance of niche cells in phenotype

maintenance of NCCs in notochord. 3D culture systems

incorporated with proteoglycan, collagen and laminin support

in vitro maintenance of NPCs. Directed differentiation of

NCCs and NP-like cells from human and mouse ES cells.

Papers published, one in revision, another in preparation.

6. To integrate clinical

profile, phenotype,

genomic and

functional data for

prediction of risk for

developing IDD and

back pain

100% Sub-phenotype classification of spine disc MRI images and

utilization for genetic studies. Evidence for developmental and

degenerative etiologies for IDD. Exome sequencing of 715

individuals completed.

IDD genetically correlated with bone mineral density and body

mass index in cross-disorder polygenic regression analysis

published. TGFβ, integrin pathway and new candidate genes

implicated in variant-based, gene-based and pathway set-based

association analyses. Papers published, several others in

preparation.

* Please highlight the approved changes in objectives and quote the date when the RGC

granted approval of such changes.

** Please provide reasons for significantly slower rate of progress than originally planned.

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6. Research Highlights and Outputs

6.1 What are the most exciting research accomplishments of the project?

The following discoveries break new ground on gene function and regulation in skeletal development

and the molecular pathogenesis and genetics of skeletal disorders.

A. REGULATION OF SPINE DEVELOPMENT, GROWTH IN HEALTH AND IDD

A1. Genetic control of chondrocyte differentiation in endochondral bone formation

Cartilage and endochondral bone formation and growth depend on a finely controlled cascade of

differentiation steps involving proliferation, cell cycle exit, maturation and hypertrophy. By integrating

the transcriptomes of growth plate chondrocyte populations from mice carrying different mutations,

we discovered a SOX9-GLI-FOXA phasic gene regulatory network in chondrocyte differentiation,

which provides important insights into normal chondrocyte differentiation and the molecular

consequences of perturbation, with relevance to the pathogenesis of chondrodysplasia. SOX9-GLI

auto-regulate and cooperate to activate and repress genes in proliferating chondrocytes. Upon

hypertrophy, FOXA competes with SOX9, and control of terminal differentiation passes to FOXA,

RUNX, AP1 and MEF2.

Outcome and esteem indicators: Publication

Synergistic co-regulation and competition by a SOX9-GLI-FOXA phasic transcriptional network

coordinate chondrocyte differentiation transitions. PLoS Genet. 14(4):e1007346 (2018), citations,

5. (#101)

Conference abstracts: Presented at Gordon Research Seminar and Gordon Research Conference

on Cartilage Biology and Pathology 2017. (#59 and #60)

Awards: Best Poster Presentation to postdoc fellow "Synergistic co-regulation and competition

underlies a SOX9-GLI- FOXA phasic transcriptional network that coordinates growth plate

chondrocyte differentiation " in both Gordon Research Seminar and Gordon Research

Conference (Cartilage Biology and Pathology) April 1 - 2, 2017 Lucca (Barga), Italy.

Web resource: GP-DGEL (www.sbms.hku.hk/kclab/gp.php); visited 3377 times (26/12/2019).

Collaborations: A. McMahon (University of Southern California, USA) and M. Zhang

(University of Texas at Dallas, USA).

A2. Mechanism of chondrocyte to osteoblast transdifferentiation

Osteoblasts in trabecular bone are derived from perichondral osteoprogenitors, which accompany

vascularisation of the primary spongiosa, and mesenchymal stem cells. We published a landmark paper

in 2014 showing that the lineage of chondrocytes and osteoblasts is a continuum in which hypertrophic

chondrocytes (HCs) become osteoblasts and osteocytes (Hc-Ob lineage). This discovery, highlighted

by Faculty of 1000, confirmed by others, overturned dogma on the origin of bone cells and attracted

international attention and citations (227). In the TRS programme, we used mouse genetics and

transcriptomics to dissect the mechanisms and regulatory pathways that control HCs transformation

into osteoblasts. By sequencing single cells, we found that HCs first enter a transition state in which

transcription factors of the epithelial-to-mesenchymal transition (EMT) pathway (Snail/Twist1/2,

Zeb1) and the E2F family of proliferation regulators are activated. The cells then renter the cell cycle

and enter a mesenchymal state, before differentiating to become osteoprogenitors, pre-osteoblasts and

osteoblasts. Interestingly, 2.5% of the HC descendant cells expressed adipogenic transcription factors

(e.g. Pparg and Cebpa), suggesting that they can become adipocytes. The findings reveal the plasticity

of HCs which can “reprogram” to become mesenchymal-like bi-potential progenitors that produce

osteoblasts and, to a lesser extent, adipocytes. By studying conditional HC-specific mutants in which

specific transcription factors were removed using a HC-specific Cre, we found Sox9, Irx3, Irx5, and β-

catenin play key roles in regulating the HC-to-osteoblast transition.

β-catenin and Irx3/5 deficiency in HC descendants increases bone marrow adiposity β-catenin is the canonical Wnt signaling mediator encoded by the gene Ctnnb1 and is critical in

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promoting osteoblastogenesis and bone formation. We showed that conditional loss-of-function (LOF)

mutations in Ctnnb1 in the HC lineage dramatically reduced the amount of trabecular bone, whereas

gain-of-function (GOF) mutations that constitutively stabilize β-catenin increased bone mass. We

found osteoblast markers were upregulated in GOF mutants compared with wild-type, and

downregulated in LOF mutants, consistent with impaired osteoblast differentiation. In the LOF

mutants, we also found concomitant and striking up-regulation of genes associated with adipogenesis

and marked increase in bone marrow adiposity contributed by the HC descendants, indicating

preferential commitment towards adipocyte differentiation, a process regulated by the master

transcription factor PPARγ.

The transcription factors Irx3 and Irx5 may mediate WNT signaling in chondrocyte fate

determination. We found Irx3 null mice have increased number of marrow adipocytes, suggesting a

role for this transcription factor in controlling adipogenesis. HC-specific removal of both Irx3 and Irx5

results in fewer HC-derived osteoblasts and more (in both number and proportion) HC-derived

adipocytes, indicating that Irx3 and Irx5 are also important regulators of osteoblast differentiation and

commitment of HC to the osteoblastic lineage. Our study provides molecular understanding of the gene

regulatory network governing the balance between adipogenesis and osteogenesis of HC-derived

progenitors, and the pathological bases of many disorders, including osteoporosis and obesity. These

important questions are being addressed in a GRF project supported in 2017.

We also found an unexpected systemic impact of the altered bone marrow fat-bone homeostasis

in Ctnnb1 LOF mutants, which have lower body fat and higher lean mass and better glucose tolerance

compared to controls. These findings open up a new research direction to address the specific function

of bone marrow fat, where we can induce HC-specific mutations to investigate how modulating bone

marrow adipogenesis separately from peripheral fat may alter body composition, glucose tolerance and

insulin sensitivity. This is enabling us to test the hypothesis that bone marrow adipose tissue has

specific roles when challenged with a high fat diet, with support from a new HMRF grant awarded in

2019.

MMP14 cleaves PTH1R, regulating the contribution of the chondrocyte-osteoblast lineage to

bone

The relative contribution of HC-derived osteoblasts to total endochondral bone is unknown. Treating

mice with the PTH(1-34) peptide increases trabecular bone by inhibiting apoptosis and enhancing

signalling through Pth1r. We found that the HC-Ob lineage made a significant contribution to the

additional bone induced by PTH (1-34). Matrix metalloproteinases (MMPs) are active at the chondro-

osseous junction of the growth plate, degrading hypertrophic cartilage and releasing HCs, and could

be regulators of the HC-to-osteoblast transition. We identified the membrane-bound metalloproteinase,

MMP14, as a candidate regulator, since it is not expressed in HCs but is strongly expressed just beneath

the chondro-osseous junction. Mice lacking MMP14 display many abnormalities, including reduced

bone mass associated with enhanced osteoclast activity. We used a HC-specific Cre to inactivate

Mmp14 in HC-descendants, which unexpectedly resulted in an increase in the number of HC-derived

cells and amount of trabecular bone. Treating Mmp14 ΔHC mice with the PTH(1-34) peptide caused a

dramatic expansion of the HC-Ob lineage and increased trabecular bone. In Mmp14ΔHC mutants,

PTH1R remains uncleaved and thus active, leading to increased osteoblasts and bone synthesis. We

found MMP14 directly cleaves the extracellular domain of PTH1R thereby modulating signaling

activity, identifying MMP14 as a novel protease for PTH1R, controlling the supply of chondrocyte-

derived osteoblasts. An application for HMRF support for defining the physiological role of MMP14

control of HC-derived osteoblasts in maintaining bone mass during life-span is approved subject to

clarifications.

Outcome and esteem indicators

Publications in preparation

o Transition states and beta catenin control of lineage trajectories in chondrocyte to osteoblast

transdifferentiation. Target journal eLife/Developmental Cell (#155)

o MMP14 cleaves PTH1R, regulating the contribution of the chondrocyte-osteoblast lineage

continuum to bone. Target journal Nature Cell Biology/J Clinical Investigation (#156)

o IRX3 and IRX5 inhibit adipogenic differentiation of hypertrophic chondrocytes and promote

osteogenesis. Target journal J Clinical Investigation.(#157)

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● Award: Best Oral Presentation “MMP14 Regulates Lineage Progression of Hypertrophic

Chondrocyte” 21st Research Postgraduate Symposium, Li Ka Shing Faculty of Medicine, The

University of Hong Kong, December 10 & 11, 2016

● Invited reviews:

o Fate of growth plate hypertrophic chondrocytes: Death or lineage extension? Development,

Growth & Differentiation. 57:179-192 (2015). (#52)

o Wiley Blackwell Prize 2016 for The Most Downloaded Paper among those published in

Development, Growth & Differentiation volume 57

o Mechanistic insights into skeletal development gained from genetic disorders. Current Opinion

in Genetics & Development 133:343-385 (2019).(#115)

o The extended chondrocyte lineage: implications for skeletal homeostasis and disorders. Current

Opinion in Cell Biology 61:132-140 (2019).| (#116)

o Cellular Plasticity in Musculoskeletal Development, Regeneration, and Disease. J Orthop Res

2019 doi: 10.1002/jor.24523. (#112)

● Invited lectures at international conferences: 8 invited talks, highlights:

o “Rewriting concepts on the ontogeny of bone cells” 17th International Congress of Developmental

Biology, Cancun, Mexico, June 16-20, 2013. (#36)

o “Genetic control of hypertrophic chondrocyte to osteoblast differentiation in development

and skeletal disorders” American Association of Anatomists (AAA) 2016 Annual Meeting, San

Diego, USA, April 2-5, 2016. (#48)

o “Chondrocyte Plasticity and Fate Determination in Development and Disease” Gordon Research

Conference on Cartilage Biology & Pathology, Lucca (Barga), Italy, April 2-7, 2017. (#56)

o “Skeletal lineage plasticity in development and disease“ Orthopaedic Research Society 2019

Annual Meeting, Austin, TX, USA, February 2-5, 2019. (#66)

● Grants

o 2017 GRF project “Molecular control of hypertrophic chondrocyte cell fate and lineage

extension”. HK$1.2M

o 2019 HMRF project “The role of bone marrow adipose tissue in glucose tolerance and insulin

sensitivity”. HK$1.5M (awarded to TRS postdoc fellow Dr. K.Y. Tsang)

● PhD awards. 2 in 2018, “MMP14 and Regulation of Hypertrophic Chondrocyte to Osteoblast

Lineage”; “Roles of Irx3 and Irx5 in Skeletal Cell Lineage Determination”.

A3. Insights into the development, maturation and aging of the IVD

Lineage origin of nucleus pulposus (NP) precursors, The notochord is the major embryonic skeletal element driving longitudinal growth, producing signals

that are critical for induction and patterning of the sclerotome, which gives rise to the vertebral body.

We and others have shown by developmental lineage studies in mice that NP cells are derived from a

common precursor in the embryonic notochord. We developed mice in which notochordal cell (NCC)-

specific expression of Cre recombinase is driven by a notochord-specific enhancer from the Foxa2

gene (Foxa2-MNE). Crossing Foxa2-MNE-Cre mice to those carrying a Cre reporter (Z/EG) activates

expression of GFP in NCCs which persists in NCC descendants, thereby providing information on

lineage origin. Our lineage tracing studies in these mice showed fetal, postnatal and adult nucleus

pulposus (NP) cells are derived from the notochord (paper submitted). These mice have provided an

important resource for the study of NCCs/NPCs, for lineage-directed differentiation of mouse

embryonic stem cells (ESCs) to NCC derivatives and for functional studies on pathogenetic

mechanisms in IDD (see Section C).

New discoveries on cell-matrix interactions in NP development with disease implications Convergent extension, driven by the non-canonical Wnt/PCP (planar cell polarity) signaling pathway,

is crucial for numerous developmental processes, but it is unclear how it influences notochord

development. We showed that genetic ablation of β1 integrin, a critical cell-matrix adhesion molecule,

specifically in the notochord of mouse embryos from E8.0 onwards, impaired convergent extension of

the notochord with a reduced length:width ratio likely caused by defective directional migration of

notochordal cells. This resulted in abnormal spine development at birth, with mis-aligned vertebral

bodies, hemi-vertebrae and truncated tails. These abnormalities correlate with developmental defects

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manifested from early somite stages as discontinuities in the notochord, which are subsequently

displaced from the midline axes. We found treatment of wild-type embryos with β1 integrin-specific

functional blocking antibodies at E7.25, before the establishment of PCP in the node, disrupts polarized

localization of the core PCP component, Vangl2. Our study implicates cell-matrix interactions

mediated by integrin β1 in controlling PCP-mediated convergent extension of the developing

notochord. This control is crucial for the proper alignment of vertebral bodies and the intervertebral

discs and for the function of the NP.

By profiling the RNAome of the developing mouse notochord and NP at various stages from

embryonic to 8 weeks postnatal, we showed the cell adhesion molecule N-cadherin (Cdh2) is highly

expressed in notochordal-like cells (NCLs) relative to chondrocytes. Previous study had indicated a

role of Cdh2 in maintenance of NP cell phenotype in vitro. We found that notochord-specific Cdh2

heterozygous mutants (NC-Cdh2+/-) developed a fibrocartilaginous NP containing cell clusters in the

adult lumbar discs with upregulation of collagen I and II, as well as both proliferative and apoptotic

activity, a phenotype resembling degenerative human discs. Only mild changes were observed in

coccygeal levels. Tail looping in the NC-Cdh2+/- mutants led to increased incidence and severity of

degenerative changes in the coccygeal discs compared to controls. We hypothesized that discs with

decreased Cdh2 expression are more susceptible to degeneration and remodeling under mechanical

stress. Using JHC7 chordoma cells as a model, we found that CDH2-deficient cells expressed

chondrogenic genes more strongly in response to mechanical loading than control cells. This suggests

NCL transformation and hence disc maturation/degeneration depend on an interplay between genetic

and environmental factors.

Outcome and esteem indicators

Publications in preparation

o β1 integrin regulates convergent extension in mouse notogenesis. Target journal Development

(#126)

o N-cadherin modulates mechanosensensing and notochordal cell fate. Target journal PNAS (#124)

PhD award: 2018 “Role of Cadherin 2 in intervertebral disc maturation”

Collaborations: J. Hoyland (University of Manchester, UK), L. Setton (Washington University

in St. Louis, USA)

A4. Identifying potential progenitors/stem NP cells

A likely cause of disease in IDD is impairment of the reparative capacity of the intervertebral disc

(IVD) tissues. Skeletal progenitors exist in the IVD but knowledge of the heterogeneity, lineage

origins, molecular characteristics and function of these cells in maintaining a healthy disc is limited.

After birth, the NP contains many large vacuolated NCLs but these disappear rapidly with age and few

remain during adolescence. In adult IVD, the predominant cell type is smaller dispersed chondrocyte-

like cells (CLCs). The reduction of NCLs and appearance of myofibroblast-like cells in human NP

coincides with the age-onset of IDD. In contrast, NCLs persist in animals that are more resistant to

IDD, such as the mouse. We hypothesised that NCLs represent a pool of resident NPC progenitors or

quiescent cells that maintain NP function and homeostasis and need to be activated to replace senescent

cells to protect against IDD.

We found considerable cell heterogeneity in the adult mouse NP, with both long-lived “stem”

cells (slow cycling) and rapidly dividing (fast cycling) cells. We detected infrequently dividing cells

(label-retaining cells) by pulse and chase retention analysis in transgenic mice expressing a

doxycycline (DOX)-inducible H2B-GFP label, in which dilution of H2B-GFP with cell division is an

indicator of the speed of cell division. By single cell RNA sequencing, we identified a population of

NP cells enriched for expression of “stem-like” cell markers and with reduced expression of

differentiation markers, which may be a progenitor-like population of the NP important for maintaining

disc homeostasis. The sub-population of label-retaining cells, characterised by expression of Hes1,

may represent a distinct sub-group of proliferating cells which could be NP progenitors. These findings

are being followed up in a GRF project awarded in 2019.

TAGLN-expressing cells mark NCLs in healthy NP and are of notochordal origin

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Transgelin (TAGLN/SM22α) is expressed in NP from the human fetus at 6-14 weeks and at 10 years

but less so at 15 years. We found no TAGLN-expressing cells in severely degenerated NP from 40-

year and 46-year individuals. TAGLN is therefore a candidate marker of a healthy NP. We used mice

in which the bacterial lacZ reporter gene was inserted into the Tagln initiation codon (TaglnLacZ) to

track the expression and fate of Tagln-expressing cells in vivo. Tagln-lacZ was not expressed in the

early notochord (E11.5), but was seen in some NCC cells at E13.5. At E18.5 and P5, Tagln-lacZ was

expressed in cells in the periphery of the NP, which also expressed aSMA and Opn, and higher levels

of Sox9 and Acan than the NP core. We designated these PeriNP cells and found they are a sub-

population of NCC descendants derived from the notochord. Lineage tracing of PeriNP Tagln+ cells

labelled at fetal (E14.5, E17.5), neonatal (P4) and adult (P27) stages showed they contributed to many

cells throughout the NP. PeriNP cells may be a novel sub-population of NCC-derived progenitors in

the peripheral NP, which contribute to the growth and maintenance of the NP. Follow-up on these

exciting findings is supported by a HMRF grant in 2019.

HOPX maintains notochordal-like progenitor cell identity of human nucleus pulposus cells By screening our RNAome data from the developing mouse notochord, single cell RNA seq (scRNA)

data of 7000 cells from E12.5 tail and additional public information, we identified Hopx, encoding a

non-DNA binding homeodomain protein, as characteristic of NCC derivatives from E12.5 onwards.

We showed this NP-characteristic expression is conserved between human and mouse but that HOPX

is not expressed in human NP cells from degenerated discs.

Hopx/HOPX is important for specification of mesodermal lineages, in haematopoiesis and

specification of cardiomyoblasts, regulation of cardiomyocyte hypertrophy and maturation, and other

processes, but its role in notochordal and NP development is unknown. By loss and gain of function

experiments on HOPX in chordoma cells, we found it was essential for maintaining the characteristic

vacuolated property and molecular signature of NCLs. Loss of HOPX resulted in a fibroblastic

phenotype and expression of fibroblast markers. Lentiviral-mediated over-expression of HOPX in

primary fibroblastic cells isolated from degenerated NP resulted in the acquisition of a vacuolated

phenotype and expression of T. Therefore HOPX may be a master regulator of differentiation and/or

maintenance of the NCLs in the NP. We developed a lineage tracing system to follow the fate of

HOPX-expressing primary NP cells enzymatically harvested from NP tissues. Upon loss of HOPX

expression, HOPX descendants survived and expressed key markers characteristic of CLCs and

fibroblasts, suggesting that, like the mouse, human NCLs can give rise to CLCs and fibroblasts. The

key role of HOPX in maintaining NCL character is further illustrated by increased expression of genes

characteristic of NCLs when HOPX is overexpressed in degenerated NP cells.

Outcome

o Publication in preparation: HOPX maintains notochordal-like progenitor cell identity of

human nucleus pulposus cells. Target journal Nature Medicine.(#154)

o Conference abstracts: Presented work at SBMS Research Day, School of Biomedical

Sciences, The University of Hong Kong. 2018. (#21)

o Grants

o HMRF grant 2019 Role(s) of TAGLN expressing cells in intervertebral disc development,

homeostasis and degeneration. HK$1.5M

o GRF 2019 Analyses of progenitors and differentiation trajectories in the nucleus pulposus and

their relevance in intervertebral disc degeneration. HK$ 1.5M

o A CRF application “Functional and systems analyses of regulatory networks controlling cell fate

and lineage development of intervertebral disc cells” is under consideration.

PhD awards: 2018 “Investigation of fibrosis and myofibroblastic activity in intervertebral

disc degeneration”; 2019 “Molecular insights into human intervertebral disc degeneration

by single-cell RNA sequencing”

Collaborations: J. Hoyland, S. Richardson (University of Manchester, UK); D. Sakai (Tokai

University, Japan)

B. MECHANISMS OF IDD

We have made broken new ground in identifying progenitors in the disc, the molecular features and

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signatures of heterogenous cell populations in the disc in health and disease with insights into cellular

transformation in IDD. We gain new insights into the genetics of IDD and implicate association with

other disorders.

B1. NCLs can transform to become myofibroblasts in induced disc degeneration

The loss of mechanical function in IDD is associated with transformation of the extracellular matrix

(ECM) of the NP of the disc from being proteoglycan rich and hydrated, to fibrocartilaginous matrix

rich in collagens I and II, to a fibrotic state expressing collagens I and III and osteopontin. In IDD, the

NP has few cells and those present are fibroblastic, consistent with the fibrotic state. A recent study

reported that the CLCs that appear in aged mice are early NP cell descendants. However, the lineage

relationship between NCLs, CLCs and the fibroblastic cells in the degenerated NP remains unknown.

We induced IDD by annulus injury in our notochord-specific Cre (Foxa2-MNE-Cre) mice and showed

that the NP cells express GFP, indicating their notochordal origin. Soon after injury, the notochordal

descendant cells express the chondrocyte transcript Col2a1, then later the fibroblast transcript Col1a1.

We found a progressive increase in numbers of notochordal descendant cells that expressed FSP1,

FAPa and aSMA, characteristic of a fibroblastic/myofibroblastic identity. To our knowledge, this is

the first report that notochord-derived cells can transform in vivo to become fibroblastic/

myofibroblastic cells in IDD induced by injury. This finding challenges the common belief that IDD

involves cell infiltration from the endplate or annulus that remodels the NP. It opens possibilities for

modification of the response of NP cells during degeneration, with treatment potential for IDD.

Outcome and esteem indicators

Publication in preparation

o Transformation of resident notochord-descendent nucleus pulposus cells in mouse injury-induced

fibrotic intervertebral discs. Submitted to Aging Cell (#117)

o Invited lectures at international conferences

o “Fibrotic components in vertebral joint degeneration”. 4th National Conference of Chinese

Society of Matrix Biology, Changzhou, China, 2019. (#105)

o “Fibrotic components in intervertebral disc degeneration”. Bio-Spine Asia Pacific, Seoul, Korea,

2018 (#104)

Grants

o 2014 NSFC “Investigating the contribution of myofibroblast activity in intervertebral disc

fibrosis and its implication to disc degeneration mechanism”, RMB700,000

o 2018 GRF “Degraded biglycan products as fibrosis regulator in the pathomechanism of joint

degeneration” HK$814,907

PhD Award : 2018 “Investigation of fibrosis and myofibroblastic activity in intervertebral

disc degeneration”

Collaborations: Angela Nieto (Instituto de Neurociencias, CSIC-UMH, Spain)

B2. Mechanisms of IDD revealed by functional genetic studies in mouse models There are numerous strains of mice with extreme phenotypic outcomes suitable for mapping of

disease/protective traits. SM/J and LG/J mice are considered to be poor and good tissue healers,

respectively. We provided evidence of early-onset disc degeneration in the SM/J strain with

degenerative changes quantified using a histological score that we have established. We showed LG/J

mice maintain high numbers of NCLs in NP as a potential protective trait against disc degeneration. In

contrast, chondrogenic events are observed in SM/J mice beginning as early as one-week-old, with

progressive fibrotic changes and ECM changes in the NP consistent with IVD degeneration.

Leveraging the genomic data of two parental and two recombinant inbred lines between SM/J and LG/J

mice, we assessed the genetic contribution to the NP changes and identified processes linked to the

regulation of ion transport systems. Significantly, “transport” system is also in the top three gene

ontology terms from a comparative proteomic analysis of the NP of SM/J mice. An association was

shown for an equivalent ion transport gene set in our human IDD cohort. The SM/J, LG/J and

recombinant inbreds are valuable resources for future genetic and biological studies.

We generated a transgenic mouse model expressing the human Asporin (ASPN) gene, a genetic

risk factor that we previously identified in our human cohort. The changes in the IVD in these mice

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resemble the early-onset cellular and histological changes in SM/J mice. Molecular and proteomic

assessment pointed to aberrant TGFb signaling with possible involvement of abnormal fibrillin

network. Disruption of the fibrillin network due to mutations in the FBN1/2 genes results in abnormal

TGFb signaling causing Marfan syndrome, which includes scoliosis and disc degeneration. These

findings are being followed up in a GRF grant awarded in 2018. Interestingly, when the transgenic

ASPN mice (normally in the C37BL background) were bred to the LG/J background, the offspring

were protected against the early-onset degenerative changes usually seen in LG/J, suggesting the

presence of protective factors against ASPN as a risk factor for IDD. A GRF project to continue this

work was obtained in 2019.

Outcome and esteem indicators

● Publications

o Early onset disc degeneration in SM/J mice is associated with ion transport systems and fibrotic

changes. Matrix Biol: S0945-053X(18)30076-3. (2018). (#98)

o Histological and reference system for the analysis of mouse intervertebral disc. J Orthop Res

236(1):233-243 (2017) (#105)

● Invited Review: Coming together is a beginning: the making of an intervertebral disc. Birth

Defects Res. C. Embryo Today 102, 83-100 (2014) (#20)

● Grants

o 2018 GRF Molecular basis of Asporin as a genetic risk factor for intervertebral disc degeneration

HK$704,862

o 2019 GRF Deciphering protective factors for intervertebral disc degeneration for mechanistic

insights and intervention potentials HK$1.02M

● Postgraduate graduations

o PhD Award: 2015 Intervertebral disc maintenance and repair potential in mice.

o MPhil Award: 2017 Cell and tissue interaction in intervertebral disc maintenance.

● Collaborations: L. Sandell, H. Lawson (Washington University, USA), J. Chevenrud (Loyola

University of Chicago, USA), C. A. Séguin ( University of Western Ontario, Canada), D. Sakai

(Tokai University, Japan)

B3. Massive progressive change in cell identities in human IVD degeneration A key prerequisite for understanding IDD is to identify the constituent cells in the NP and compare

their molecular signatures in healthy and degenerated discs. Defining a human NCC/NP signature has

been hampered by challenges in obtaining very early human embryos and have centered largely on

data obtained from cells isolated from late fetal tissue, mature NP or diseased patients and from

evolutionary correlates such as bovine. KRT8, KRT18, KRT19 and CD24 have been proposed as

human NCL-specific markers during early IVD development, but these markers are also expressed in

other tissues. We determined the molecular signatures of human NP populations at different stages of

life by sequencing RNA from single NP cells. From 610 single-cell transcriptomes of cells from human

adolescent non-degenerated NP, we identified two distinct cell populations. One comprised NCLs

because the cells expressed many NP markers; the other comprised CLCs. The NCL characteristic

genes were differentially expressed compared with degenerated NP. By comparing the NCL

characteristic genes against those expressed in 1,300 degenerated NP cells, we derived an NCL

signature comprising 40 genes, including five novel transcription factors. We found significant overlap

of the NCL gene signature with genes expressed in purified mouse notochord cells at E11.5-12.5.

We identified five subpopulations of cells in degenerated human NP with unique signatures and

regulons. Degenerative NP contains no NCLs but instead has fibroblastic cells expressing genes

characteristic of partial EMT. Three heterogeneous sub-populations of CLCs, macrophages and

myofibroblasts were found: i) a subpopulation that was closest to the CLCs present in non-degenerated

NP, designated a transition population; ii) cells expressing genes characteristic of fibroblasts,

mesenchymal cells and chondrocytes; iii) cells expressing genes associated with inflammation. We

also found a small proportion of cells expressing genes characteristic of macrophages and a significant

number of myofibroblast-like cells distinguished by a gene set that included TAGLN, ACTA2, COL1A1

and FAP. These data are consistent with NCL having a role in maintaining a healthy disc. HOPX was

identified as a candidate master regulator of NCL differentiation and identity (see above).

Inhibition of the TGFβ pathway in primary degenerated NP cells by treatment with the small

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molecule SB431542 decreased expression of genes characteristics of fibroblasts, consistent with the

role of the pathway in enhancing fibrosis. Studies of our GWAS population cohort of 1,400 individuals

pointed to ACTA2, a top marker of fibroblasts, as a potential risk allele for IDD, highlighting the

contribution of these cells to IDD. Overall, the presence of macrophages and myofibroblast-like cells

appears to correlate with the severity of IDD. Our study has for the first time provided a transcriptomic

analysis of NP cell populations in the human IVD at single-cell resolution with molecular insights into

IDD.

Outcome and esteem indicators

● Publication in preparation: Massive progressive change in cell identities in human

intervertebral disc degeneration. Target journal Nature Medicine (#153)

● Invited talks at international conferences: 5 invited talks - highlights are:

o “Unraveling the cell and molecular bases of intervertebral disc degeneration” Gordon Research

Conference on Collagen, , New London, USA, July 14-19, 2019 (#71)

o “Insights into the molecular pathogenesis of intervertebral disc disease at single cell resolution”

TEMTIA-IX (The 9th EMT International Association Meeting), Kumamoto, Japan, Nov 11-14,

2019 (#74)

o “Deconvoluting mechanisms of intervertebral disc degeneration by single cell analyses.”

Wellcome Trust Advanced Courses and Scientific Conferences 3rd Single Cell Biology

conference. Hinxton, UK March 11–13, 2020. (#75)

● PhD Award: 2019 Molecular insights into human intervertebral disc degeneration by single-cell

RNA sequencing

B4. A proteomic architectural landscape of the healthy and aging human intervertebral disc The progressive changes in IVD degeneration that accumulate within an ageing dis are reflected in the

proteome. We developed a comprehensive reference proteomic profile for three of the lumbar discs

(L3/4, L4/5, L5/S1) from a 16-year (young/healthy) cadaver. We mapped the proteome along the lateral

(7 segments) and anterior/posterior (5 segments) axes in each disc. Few differences were found

between the NP and inner annulus fibrosus, but these inner regions of the IVD differed considerably

from the outer annulus fibrosus regions, with potential novel markers distinguishing the inner (Col5a1,

SERPINA5, and MXRA5) and outer annulus fibrosus (THBS1/2/4, LAMB2). Consistent with the

structure and function of the IVD and mechanical loading, the most significant changes of proteins

were core matrisome, matrisome-associated proteins and ECM regulators. As expected, the upper L3/4

and L4/5 levels were more similar to each other than L5/S1.

Similar analyses of the aged/degenerative discs from a 59-year (aged) old cadaver supported a

progressive change in the matrisome, with a significant loss of “healthy” NP markers in the inner

region, and higher levels of ECM degradative enzymes, fibrotic and blood-related proteins.

Surprisingly, the proteome of the outer annulus fibrosus of aged IVDs closely resembled the profile of

a young outer annulus fibrosus, suggesting the important changes with age occur in the inner region of

the IVD. We validated key protein changes using a microarray transcriptome database. Our findings

support the hypothesis that changes in the NP predict the progression of disc degeneration.

The most significant advance in this comprehensive proteomic study is that, for the first time,

we can correlate MRI pixel intensity to matrisome signatures. We took high resolution 7 Tesla T-2

MRIs of the aged disc prior to tissue segmentation and protein extraction,and found a correlation

between the matrisome signature and MRI pixel intensity. This opens up the possibility of deriving

proteomic architecture from the pixel intensity of an MRI to obtain a spatial matrisome changes within

the IVD and to target the specific regions for therapy in the future.

Linking to therapy is to understand the dynamic of the IVD proteome. We generated proteomic

profiles of newly synthesized proteins in homeostatic (health) and aging/degenerative IVDs,and couple

these signatures with the degradome (degraded ECM components) during normal matrix remodeling

or in disease states. We showed that healthy disc cells can remodel and maintain a “homeostatic”

matrisome, able to buffer stresses induced from daily damages to the IVD. In aged IVD tissues, cells

synthesized less proteins, produced different types of ECM in an active degradative environment, and

showed cumulative and detrimental effects of cellular stress, leading to a net loss of ECM.

Significantly, the degradative environment has a negative effect on matrix assembly of newly

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synthesized ECM proteins in aged discs, a progressive changes in cell function with a fibrotic outcome.

Interestingly, many of the protein fragments identified are potential ‘alarmins’ – proteins that can

trigger inflammation, derived from ECM proteins, blood proteins, stress proteins and cytoplasmic

components, supporting our finding that macrophage activity in aged tissues could exacerbate

inflammation during ageing of the IVD.

Outcome

Publication: Fibrotic-like changes in degenerate human intervertebral discs revealed by

quantitative proteomic analysis. Osteoarthritis Cartilage 24:503-13 (2016). (#79)

Publication in preparation: Proteomic architecture of young and aged human lumbar

intervertebral discs. Target journal eLife (#145)

Collaboration: L. Haglund (McGill University, Canada)

B5. Clinical insights into intervertebral disc degeneration (IDD)

The relationship between IDD and low back pain has often been questioned by clinicians. We have

identified subphenotypes that help differentiate developmental from degenerative IDD. We have also

differentiated age-related changes from pathological IDD, as well as explored how such subphenotypes

are correlated with symptoms. Future work on correlating symptoms and imaging findings to omics

data will need to be based on the understanding of such subphenotypes.

Outcome and esteem indicators

Publications

o Classification and determinants of high intensity zones of the lumbar spine and its association with

other spinal MRI phenotypes: the Wakayama Spine Study. PLoS one DOI: 10.1371/journal.po

ne.0160111, 2016. (#60)

o Two subtypes of intervertebral disc degeneration distinguished by large-scale population-based

study. Spine J. pii: S1529- 9430(16)30095-X. doi: 10.1016/j.spinee.2 016.04.020, 2016 (#78)

o Classification of Schmorl’s nodes of the lumbar spine and association with disc degeneration: a

large-scale population-based MRI study. Osteoarthritis Cartilage. doi: http://dx.doi.or

g/10.1016/j.joca.20 16.04.020, 2016 (#84)

o Structural vertebral endplate nomenclature and etiology: a study by the ISSLS Spinal Phenotype

Focus Group. Eur Spine J. ;27(1):2-12, 2017 (#92).

o The UTE Disc Sign on MRI: A Novel Imaging Biomarker Associated With Degenerative Spine

Changes, Low Back Pain, and Disability Spine; 43(7):503-511.(#97)

o The association of lumbar intervertebral disc calcification on plain radiographs with

the UTE Disc Sign on MRI. European Spine Journal ; 27(5):1049-1057 2018. (#103)

Awards and invited talks

o 2014 Best Oral Short Talk. “Comprehensive analysis of MRI-phenotypes provides new insights

into lumbar disc degeneration for genetic studies” AOSpine World Forum for Spine Research,

Xian, China, May 15-17, 2014

o 2014 Best Poster. “The association of modic changes and MRI phenotypes of the lumbar spine: a

population-based study”. AOSpine World Forum for Spine Research, Xian, China, May 15-17,

2014.

o 2015 Best Paper. “Risk factors for non-neurological complications in complex audit spinal

deformity surgery: an international, large-scale, prospective multi-centre study.” AO Spine Global

Spine Congress, Buenos Aires, Argentina, May 20-23, 2015.

o 2016 ISSLS Clinical Research Prize

Grants

o 2014 RGC GRF Modic changes of the Lumbar Spine HKD$1M

B6. Genetics of IDD, extra associations with metabolic disorders and longitudinal followup

We have completed follow-up MRI assessment of our cohort of ~3,500 volunteer subjects, 5-10 years

after their initial recruitment. Genome-wide SNP genotyping was performed on 2,482 individuals, of

whom 715 also had exome sequencing. The phenotype of lumbar disc degeneration is complex, with

multiple MRI features that can be present in any of the 5 lumbar discs. From a multivariate analysis,

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we demonstrated that most MRI features were correlated with each other and tended to become more

frequent and severe with increasing age, whereas Schmorl’s nodes were uncorrelated with age or these

other features. We therefore proposed a classification of MRI features into degenerative and

developmental changes. With the addition of the follow-up MRI data, we have now shown that

different components of lumbar intervertebral discs (NP, annulus fibrosus and vertebral endplates)

undergo distinct but correlated degenerative changes that progress from one disc to the next, usually

from lower to upper levels.

Using genome-wide SNP data, we showed that lumbar disc degeneration had shared genetic effects

with height, body mass index and bone mineral density. Intriguingly, one component of degeneration,

modic changes in vertebral endplates, was associated with very low density lipoproteins in an

integrative analysis of genomic and metabolomic data, suggesting an interaction between local and

systemic influences on the progression of disc degeneration.

Building on our previous discoveries of susceptibility genes, we found an enrichment of association

signals in genes of the beta 3 integrin pathway, implicating integrin signalling and interactions between

cells and the ECM in disc degeneration. To increase sample size, we joined the Genetics of

Osteoarthritis consortium, which aims to perform GWAS meta analyses on osteoarthritis at different

anatomical sites (including the spine). Preliminary results indicate similarities and differences in

genetic factors between weight-bearing and non-weight bearing joints. We are now conducting

integrative analyses of all our available phenotypic and genetic data to study the genetic determinants

of all aspects of disc degeneration. In addition, our genetic analysis group has contributed to the

development of new analytical methods for genetic studies.

Outcome and esteem indicators:

Publications:o Lumbar disc degeneration is linked to a carbohydrate sulfotransferase 3 variant. J Clin Invest

123 (11), 4909-4917, 2014 (#84)

o Two subtypes of intervertebral disc degeneration distinguished by large-scale population-based

study. The Spine Journal 16 (9), 1079-1089, 2016 (#78)

o Predicting regulatory variants with composite statistics. Bioinformatics 32 (18), 2729-2736,

2016. (#80)

o Trans-ethnic polygenic analysis supports genetic overlaps of lumbar disc degeneration with

height, body mass index, and bone mineral density. Frontiers in Genetics 9, 267, 2018 (#104)

o Robust and rapid algorithms facilitate large-scale whole genome sequencing downstream analysis

in an integrative framework. Nucleic Acids Research 45 (9), e75-e75, 2017 (#95)

● Publications in preparation:o Correlated degenerative processes affecting components of lumbar intervertebral discs – a

longitudinal study using nuclear magnetic imaging. (#160)

o Integrin signalling implicated by genome-wide association study of lumbar disc degeneration in

Southern Chinese (#161)

o Reciprocal causation mixture model for mendelian randomization analysis. (#159)

o Genomic and metabolomic analyses identify very low density lipoproteins as a potential risk factor

for lumbar modic changes. (#158)

Grants:

o 2014 RGC GRF Statistical methods for characterizing the genetic component of polygenic diseases

HKD$690,089

o 2015 RGC GRF Method and software tool for estimating and dissecting the heritability of complex

diseases HKD$1,167,288

PhD awarded: 2016 Identification of common and rare genetic risk factors for lumbar disc

degeneration. 2019 Connecting the dots: Integrative analysis of genomic, metabolomic and

phenotypic data from a population cohort.

Collaboration: GO Consortium, E. Zeggini (Helmhotz Zentrum Munchen, Germany), J.

Karppinen, (Oulu University, Finland). S. Ikegawa (RIKEN, Japan).

C. TOWARDS THERAPY

We have made significant progress in defining mechanisms of skeletal dysplasia and laid the

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foundation for development of therapies as follows:

C1. ER stress in growth plate and bone disorders: mechanism and therapeutic potential We previously discovered a new mechanism of adaptation by chondrocytes to endoplasmic reticulum

(ER) stress, implicating this as underlying pathogenesis of skeletal disorders caused by the presence of

misfolded proteins. In the TRS programme, we defined the molecular mechanism, showing that the

Integrated Stress Response (ISR) activated by ER stress causes the chondrocyte differentiation defect

by directly activating abnormal expression of transcription factors ATF4, SOX9 and CHOP. The

survival of hypertrophic chondrocytes under ER stress requires a rebalancing of energy demand, in

which FGF21 has a role. We demonstrated that inhibition of the ISR using a small molecule alleviates

the differentiation defects, with exciting implications for the treatment of congenital dwarfism

associated with cellular stress.

We investigated the impact of ER stress on osteoblasts by studying a mouse model of

hyperostosis, an overgrowth of bone. We found that activation of the unfolded protein response in early

differentiating osteocytes delays maturation. Mechanistically, expression of SOST was perturbed,

resulting in active WNT signaling, enhancing endosteal and periosteal bone formation, and the

resultant outcome was generalized hyperostosis. The onset of hyperostosis could be suppressed with a

chemical chaperone, sodium 4-phenobutyrate (4-PBA), suggesting a possible therapeutic approach.

The hyperostosis outcome for this mouse model resembles craniodiaphyseal dysplasia, which is caused

by a dominant mutation (p.Val21Leu) in the signal peptide for cleavage of SOST. We showed that

expression of this mutation in osteoblasts activates the unfolded protein response, and thus the use of

chemical chaperones such as 4-PBA can be considered as a potential therapeutic.

Outcome and esteem indicators

Publications:

o Label-free quantitative proteomics reveals survival mechanisms developed by hypertrophic

chondrocytes under ER stress, J Proteome Res. 15(1): 86-99 (2016). (#68)

o Activating the unfolded protein response in osteocytes causes hyperostosis consistent with

craniodiaphyseal dysplasia. Human Molecular Genetics. 26(23):4572-4587 (2017)(#87)

o Inhibiting the integrated stress response prevents aberrant chondrocyte differentiation and

alleviates skeletal defects in chondrodysplasia. eLife, e37673 (2018). (#102)

Patent applications

o “Preventative and therapeutic approach for aberrant cell differentiation and ISR-associated

diseases”, International Patent Application No. PCT/IB2017/055783, Filed September 22, 2017.

o “Method for preventing or modulating fibrosis and fibrotic response associated with the

integrated stress response”, United States Patent and Trademark Office Application No.

16/335,395 filed 30 April 2019.

Invited talks at international conferences – 7 invited talks; selected highlights

as follows:

o “Genetic control of hypertrophic chondrocyte to osteoblast differentiation in development and

skeletal disorders” American Association of Anatomists (AAA) 2016 Annual Meeting, San Diego,

USA, April 2-5, 2016. (#48)

o “Inhibiting the integrated stress response prevents aberrant chondrocyte differentiation and

alleviates skeletal defects in chondrodysplasia”. 2018 Gordon Research Conference on Bones and

Teeth, Galveston , Texas, USA January 28, 2018 (#59)

o “The integrated stress response in skeletal development and disease” International Society of

Differentiation Meeting ComBio, Sydney, Australia, September 22-27, 2018. (#62)

o “Preventing and alleviating chondrodysplasia by inhibiting integrated stress response pathway”

The 11th Asian and Pan-pacific Connective Tissue Society Symposium & the 3th National Conference

of CSMB, Hangzhou, China, November 16-20, 2018. (#63)

Media coverage and the establishment of an NGO “Little People of Hong Kong”. Invited Reviews

o The extended chondrocyte lineage: implications for skeletal homeostasis and disorders. Current

Opinion in Cell Biology 61:132-140 (2019).|(#116)

o Cellular Plasticity in Musculoskeletal Development, Regeneration, and Disease. J Orthop Res

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2019 doi: 10.1002/jor.24523 (#112)

Award: Best poster to Postdoctoral fellow, HKU Faculty of Medicine

Knowledge Exchange Award “Little People have Talent”.

Grant: 2014 GRF Mechanisms of energy management in hypertrophic

chondrocyte adaptation to ER Stress. HK $958,840)

MPhil Award: 2017 “Energy Management in Hypertrophic Chondrocytes under

ER stress”.

Collaborations: Ray Boot-Handford (University of Manchester, UK), Alan Boyde

(University of London, UK)

C2. Developing scaffolds for maintaining notochordal and NP cells

We established several 3D culture systems which better maintained the phenotype marker expression

of bovine NPC (collagen microspheres) and mouse embryonic NCC (chemically modified collagen-

GAG scaffold and tube co-culture). We also found that the presence of the niche cells in the native

notochord is important to maintain NCC phenotype. Specifically, the presence of ECM components

such as GAG and laminin better maintained the phenotype of bovine NPC.

IDD is partially the consequence of failure in the disc capacity to maintain structural integrity

under load. We found compression loading, particularly static and high strain loading, upregulated

stress response genes including heat shock proteins and the ERS stress pathway in both 3D collagen

microspheres and IVD disc culture models. We will apply the mechanical loading system to study the

impact of different loading on NP cell gene regulatory networks. This concept forms part of the CRF

proposal currently under consideration.

Outcome and esteem indicators

Publications:

o Compression loading-induced stress responses in intervertebral disc cells encapsulated in 3D

collagen constructs. Scientific Reports 2016; 6:26449. doi: 10.1038/srep26449. (#58)

o Loading-induced heat shock response in the intervertebral disc. PLoS One. 2016

31;11(8):e0161615. doi: 10.1371/journal.pone.0161615 (#59)

Publications in preparation:

o Development of three-dimensional system for culturing notochordal cells. In preparation (#147)

o Collagen-based 3D culture systems for bovine nucleus pulposus cells (bNPCs). In preparation

(#146)

Conferences:

Keynote lecture, Microenvironment for stem cells, Tissue Engineering & Regenerative Medicine

International Society – Asia Pacific, Tamsui, Taipei, Taiwan, 3-6 September 2016. S16-01

Invited talk, Biomaterial-assisted cell-based therapy for disc degeneration, AOSpine Research

Network Meeting, Dubai, 12 Apr 2016. (#6)

PhD Award: 2016 “Development of 3D culture systems for nucleus pulposus cells.

Collaboration: B. Gantenbein, University of Bern, Switzerland

C3. Directed differentiation of mouse and human notochordal-like and NP-like cells IDD might be amenable to stem cell therapy, but the required cells are scarce. We have tested various

systems for phenotype maintenance of NCCs and NPCs. We established a notochordal explant/organ

culture system that recapitulates the notochord to NP transition for functional studies. We combined

knowledge of notochord development with the information on NCC/NPC global gene expression

patterns and developed a scheme for differentiation of mouse NotoGFP/+ ESCs towards the NCC lineage,

followed by scRNAseq profiling at various stages and comparative analyses. We were able to obtain

~25% Noto-GFP+ve cells after 4 days treatment. These cells were enriched for expression of NCC

markers.

We generated an ES reporter cell line for lineage analyses of NCC lineage derivatives. We

extended the differentiation protocol, taking guidance from the in vivo mouse NCCs/NPCs scRNAseq

data, and were able to obtain up to 70% tdTomato+ cells that were highly vacuolated and enriched for

expression of NPC markers after 25 days culture with TGF-β1 and dexamethasone. ScRNA-

sequencing of the 25-day culture revealed a cell population with high similarity to in vivo NCCs. One

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cluster showed strong NCL characteristics, expressing significantly more of the 52 human NCL

signature genes than others.

Concomitantly, we developed a compound-defined protocol to differentiate notochordal-like and

NP-like cells from three independent hPSC lines. Demonstration of the presence of human notochordal

and NP cells has been hampered because the characterisation of the molecular signatures of embryonic

notochord, fetal and post-natal NP cells is incomplete. NOTO is specifically expressed in the

embryonic notochord. We generated a human NOTO-eGFP knock-in ESC reporter line which we used

to monitor the endogenous activation of notochordal cell differentiation, achieving an average 14%

efficiency of differentiation of NOTO and eGFP co-expressing cells. Although, because of the

transient nature of NOTO expression, this reporter could not be used to monitor the emergence of more

mature NP cells, it allowed us to refine the conditions to a stage where we could continue

differentiation towards NP-like cells.

The second key advance is the addition of new in vivo-derived transcriptome data obtained from

the NP of human adolescent (13-14 year old) and adult (33 year old) non-degenerated discs. To our

knowledge, this is the first in depth description of the global transcriptome of young (adolescent)

human NP cells. These data have facilitated the identification of NP-like cells in the hPSC-derived

differentiated cells. We developed a bioinformatic/statistical method to probe the in vivo NP

transcriptome data for the detection and identification of NP-like cells in the differentiated cell

populations derived from hPSCs. These molecular signatures could be developed as general identity

tags to define NP cells, and more specific markers to define features of NP cells at different stages.

Importantly, application of this method enabled us to identify the presence of NP-like cells within the

hPSC-derived cells after 20 days of in vitro differentiation. We identified a set of 148 influential genes

that mark NP cell identity, which allowed us to estimate a 78% similarity between the in vivo NP cells

and the in vitro hPSC-derived cells, suggesting that we had succeeded in generating NP-like cells using

our protocol. We therefore provide the first demonstration of the derivation of human NP–like cells

with significant similarity to non-degenerated in vivo NP cells. This is a substantial advance over

previous published reports which relied on the identification of expression of a few NP markers of

limited specificity and did not provide information on differentiation efficiency or overall molecular

similarity to in vivo NP cells.

Finally, we demonstrated the biological activity of the hPSC-derived NP-like cells by their

ability, after transplantation, to attenuate the degenerative changes and/or improve the repair process

in a rat model of injury-induced disc degeneration. Overall, the hPSC-derived NP-like cells provide an

important resource for the understanding of disc cell biology with potential for the development of an

NP cell-based treatment for IDD.

Outcome

Publications in preparation:

o Directed differentiation of notochordal-like and nucleus pulposus-like cells using human

pluripotent stem cells”. Cell Reports, in revision.(#121)

o Developmental guided lineage directed differentiation of mouse notochordal and nucleus pulposus

cells Target journal eLife (#153)

Conference abstract: Presented at International Society for Stem Cell Research 2017 Annual

Meeting, Boston USA. (#57)

Grants:

o Application for CRF entitled “Functional and systems analyses of regulatory networks controlling

cell fate and lineage development of intervertebral disc cells” awaiting outcome.

o RGC matching Horizon 2020 project entitled : Induced pluripotent stem cell-based therapy for

spinal regeneration (iPSpine) HK$3M.

D. RESEARCH INFRASTRUCTURE

The TRS programme has spawned significant rich resources in terms of reagents, cell and animal

models and datasets that will facilitate research on human skeletal development and disorders with

long term impact on the field. Highlights are as follows.

D.1. Further development and sustainment of world class Transgenic Core Facility (TCF) Our world class TCF provided essential support for the TRS programme and some other Hong Kong

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researchers. The TCF generated more than 10 gene knockin/knockout mutants, imported 11 lines of

mutant mice, established 125 lines of transgenic/mutant mice and cryopreserved 77 mouse lines for

the TRS programme. The TCF has shared these resources with researchers in other programmes in

HKU, HKUST and CUHK. In 2018, with the completion of the TRS programme, its operation was

passed to the Faculty of Medicine where it is now a Faculty Core Facility with additional manpower.

In the process, the TRS programme donated 55 lines of genetically modified mice, comprising reporter

reagents, Cre lines and mutants for a wide spectrum of genes. One of the staff who was trained in the

TRS programme has been appointed in the new Faculty Core Facility.

D2. Platform for integrative analysis and visualization of multi-omics data (VASCO) To better manage, analyse and visualise the gigantic amounts of multi-omics data we generated in the

TRS, we developed an interactive web interface, called VASCO (Visualization and Analysis of Single-

Cell Omics) (http://hkudisc.synology.me/). The platform allows speedy query of target genes in

different types of dataset, including bulk and scRNAseq, GWAS, epi-genomics (ATAC-seq and ChIP-

seq) and proteomics. It offers versatile presentations of data, in the forms of bar charts, pie charts,

scatter-plots and chromosomal tracks, and tabulates numbers, statistics and percentages as necessary

to assist quantitative analyses. The site is highly helpful and has received over 150,000 queries since

it started operation in 2017.

D3. Rich resources for skeletal research Under TRS support, we established valuable databases (see our VASCO platform) that have enriched

and will continue to enrich skeletal research as follows:

● Human disc (MRI) phenotypes and classification for 3,500 individuals, 2,062 and 453 of whom

underwent 5-year and 10-year follow-up with accompanying genotype data, respectively.

● Bulk transcriptomes: i) healthy NP from 4 individuals; degenerated NP from 5 individuals, ii)

mouse notochordal lineage (E8.5~E10.5, E12.5, and P2 mice NP); iii) 30 profiles of annulus

fibrosus from 8 week old mice. Bulk microarray transcriptomes of AF and NP from 4 individuals.

● Single-cell transcriptomes (total over 57,000 cells) for the developing wild-type and mutant (beta

catenin null) mouse growth plate (14,286), human non-degenerated and degenerated NP (2,531

smartseq2+3,279 10X), mouse developing notochord/NP and potential progenitors (n=8,249),

mouse mature NP and neighbouring compartments (15,248), 8 week mouse AF (n=364), in vitro

differentiation-derived cells (human and mouse; n=14,654).

● Comprehensive proteomic data for mouse and human IVD: i) 66 proteomic profiles for young and

aged individuals based on liquid chromatography–mass spectrometry (LC-MS), ii) 91 profiles for

lumbar and tail NP/AF for 8-week mice based on LC-MS, iii) 8 profiles of newly synthesized

versus existing proteins based on SILAC;

● Epigenomic data of developing mouse notochord: i) ChIP-seq of E9.5, E12.5, P2, 8 week; ii) 19

profiles of ATAC-seq of E12.5, P2, and 8 week.

● GWAS (for 2121 individuals) and exome sequencing data (698 individuals).

6.2 What was the added value of the TRS funding, rather than standard project grant funding?

Working as a team has enabled research questions to be addressed at a level not possible from the

limited funding available for GRF, allowing individual PIs to undertake ambitious projects of the

scope, scale and longer term support in the TRS programme. This programme has allowed us to build

the world’s largest and most comprehensively phenotyped population based cohort of DDD subjects

and controls. The magnitude of this funding allows us to address the questions on the contribution of

genetic variation linked to detailed IDD phenotyping with more expensive techniques such as MRI

scans, genomics, GWAS and sequencing.

The funding allowed us to apply the most recent cutting edge technologies for determining cell

population heterogeneity and transcriptomes at single cell resolution and to obtain an architectural

view of the IVD proteome in both human and mouse. By such analyses, we were able to achieve

paradigm shifting insights into key developmental and disease processes: cell fate changes in the

transition from chondrocytes to osteoblasts during bone formation; the changes in cell populations

with mechanistic insights into the complex changes in the NP during human aging and IDD. The team

developed protocols for directed differentiation of mouse and human pluripotent stem cells to

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notochordal and early stage NP cells, demonstrating their capacity to survive transplantation

following induced disc injury, laying the foundation for future development of therapy.

As part of the TRS team, it is easier to gain technical help, advice and resources from both

local and international investigators and colleagues. This has improved the ability of individuals to

develop new approaches to problem solving, to tackle challenging research questions and to leverage

international funding.

The TRS Programme supported visits of international leaders as Scientific Advisory Board

members or as visiting lecturers. Coupled with additional funding from external bodies such as the

Croucher Foundation, the TRS programme was able to organise 7 Advanced Study Institutes on the

latest genomic and single cell technologies and stem cells which greatly facilitated the opportunities

for the team and other Hong Kong researchers at all levels to interact with internationally renowned

researchers. Building on the research activities and findings from the TRS programme, members

were able to participate in international consortiums for additional research funding, such as

Horizon 2020, with matching funds from the RGC.

6.3 If the project has not met its original objectives, why?

All objectives have been addressed.

6.4 (a) Peer-reviewed journal publication(s) arising directly from this project:

(Please attach a copy of the publication and/or the letter of acceptance if not yet submitted in the

previous progress report(s). All listed publications must acknowledge RGC’s funding

support by quoting the specific grant reference. Please mark the symbol “#” next to the

publications involving inter-institutional collaborations)

Please see Appendix I

(b) Recognised international conference(s) in which paper(s) related to this project was/were

delivered:

Team members were invited speakers and poster presenters at 106 international conferences. Under

this TRS, 116 of Journal papers have been published. 4 papers have been submitted/under review

and 40 papers are in preparation and very close to submission (Appendix I). 67 of Conference

abstracts have arisen from the TRS (Appendix II)

(c) RGC funding should have been acknowledged in all publication(s)/conference papers listed in

(a) and (b) above. If no acknowledgement has been made in any of the publications/ papers,

please indicate and provide explanations.

Not Applicable

6.5 To what extent this project has strengthened inter-institutional collaborations and other

partnerships?

We have established many fruitful collaborations in Asia, Europe and North America. K. Cheah, D.

Chan, K. Cheung and D. Samartzis, have been invited to lead international academic initiatives,

such as the World Forum for Spine Research, Gordon Research Conferences; write book chapters

and journal articles, as well as to join esteemed editorial boards. The TRS team has

strengthened existing collaborations, and built new collaborations with investigators in UK: King’s

College, USA: University of Texas Southwestern Medical Center, CalTech and University of Southern

California; Canada: University of British Columbia; Germany: Max Planck Institute for Biochemistry;

Utrecht University, the Netherlands; Eindhoven University of Technology, the Netherlands;

Washington University, USA; The University of New South Wales, Australia, Manchester University,

Genetics of Osteoarthritis (GO) Consortium; 3 EU HORIZON 2020 consortia.

6.6 Research students trained (registration/awards):

1 MPhil, 1 MRes and 15 PhD students graduated under the TRS programme.

6.7 Specific products (e.g. software or netware, instruments or equipment developed):

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Two patent applications were developed and filed under the TRS programme. These patents

have significant potential application not only to skeletal dysplasia but to many other

disorders especially those where fibrosis is implicated.

6.8 Other education activities and/or training programmes developed:

The TRS has contributed significantly to the community and within the university in

education, training and development. The TRS has mentored researchers at different levels of

their careers from postgraduate students to academic staff. Students, postdoctoral fellows and

junior faculty members were encouraged to organize retreats, symposia and workshops,

providing opportunities to gain organisation skills and research networking through direct

interaction with invited speakers. As an example of mentorship, Dr. Mateusz Kudelko

(postdoctoral fellow) was elected as the co-chair of the Gordon Research Seminar-Cartilage

Biology and Pathology (2019). Postdoctoral fellows participated in brain-storming sessions in

the preparation of research grant proposals by PIs, and were encouraged to apply for HMRF

research grants under the guidance of the PIs: two successfully obtained HMRF grants.

Postdoctoral fellows and students were encouraged to attend training workshops for various

research skills. A postdoc and PhD student were awarded CMB fellowships to enable them to

spend time in collaborators’ labs (UT Dallas, University of Manchester, Tokai University).

Career paths for PhD graduates have been as postdoctoral fellows, project and investment

manager in Research Institute of Tsinghua University, Shenzhen. One post-doctoral fellow has

become the vice-president of a venture capital firm. Dr, D. Samartzis secured an Associate

Professor position in Rush University, USA.

Leveraging on the TRS programme, D. Chan participated in an EU consortium “Research on

molecUlar and Biomechanical Interactions in CONnective tissue disorders” (RUBICON) for

the exchange and training of Research Fellows and PhD students, with nine other renowned

global institutions: The University of L'Aquila (Italy), Newcastle University (UK), The

University of Manchester (UK), Erasmus University Rotterdam (The Netherlands), University

of Copenhagen (Denmark), University of Cape Town (South Africa), Icahn School of Medicine

at Mount Sinai (USA), Anna University of Chennai (India) and Murdoch Children’s Research

Institute (Australia). D. Chan has received Fellows and Trainee visits from Erasmus University,

Newcastle University, The University of Manchester, and The University of L'Aquila; and sent

trainees to The University of Manchester and Erasmus University. K. Cheah is participating in

an application to Horizon 2020 for an International Training Network project “Cellular

Homeostasis ANd AGing in Connective TissuE Disorders (CHANGE).

6.9 Please highlight any deliverables indicated in the project implementation timetable endorsed by

the RGC which have not been covered or achieved as per sections 6.1 to 6.8 above, and explain/

elaborate.

Nil

Project Management

6.10 Please elaborate how the PC has played his/her role in coordinating and managing the project.

The Management Board (MB) oversees the overall research direction, progress, resource allocation,

human resources, finance and shared facilities, postgraduate education and knowledge exchange.

Progress is monitored at six monthly intervals (informally) and formally annually at a retreat, when

budget is dispersed. The process involves a critical formative self-review with discussion and input

from MB members. MB members comprise co-PIs, K. Cheah, PC as Chair. 19 MB meetings and

previous reports) and 6 budget meetings were held.

7. Awards and Recognition

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7.1 Have any research grants been awarded that are directly attributable to the results obtained from

this project?

In total 48 research grants have been awarded that are directly attributable to the results obtained

on this TRS projects.

7.2 Have any project team members participated as invited speakers in or organisers of international

conferences as a result of this project?

The project team members have participated as invited speakers in and organizers of

international, regional and local conferences as a result of this TRS project.

7.3 Have any project team members taken leadership positions in editorial boards, scientific and

professional organisations?

Project team members have taken leadership position in editorial boards, scientific and

professional organisation. Examples:

K. Cheah was appointed to the following Editorial and Advisory Boards:

● Board of Reviewing Editors eLife, 2019.

● Guest Associate Editor: PLoS Genetics, 2013, 2014, 2015, 2016, 2017

● Editorial Review Board Journal of Orthopedic Research, 2019 - 2021

● Senior Editor eLife June 2019-

● Editorial Advisor: Emerging Topics in Life Sciences, 2019 – 2023 (a new journal jointly-owned by

the Royal Society of Biology and the Biochemical Society (UK).

● UGC Research Assessment 2020 Biology Panel 2018-2020.

● Member, Grant Review Board for the Health and Medical Research Fund, Hong Kong (2013-

2021).

● Member, Gordon Research Conferences Hong Kong Advisory Board (2012-)

● Member, Gordon Research Conferences Board of Trustees Conference Evaluation Committee

(2018-2024).

Pak Sham was appointed to the following:

● Executive Board Member of the International Genetic Epidemiological Society (from 2018)

● Editor-in-Chief, Human Heredity (from 2018)

● Founding member of the Mapping Group of the International Common Diseases Alliance (from

2019).

Danny Chan was appointed to the following:

● Council member of the International Society of Matrix Biology (2010-2018)

● Member of the OARSI Asian Task Force on Osteoarthritis (2013-)

● Founding member, Vice President and Council member of the Chinese Society for Matrix Biology

(2016-)

● Elected Board of Directors: International Society for Differentiation (from 2018)

● Associate editor: Journal of Human Genetics (2009-)

● Editorial Board member of the journal “Matrix Biology” 2017-

● Member of the Editorial Board for Journal of Orthopaedic Research: Spine 2018 -.

Keith Luk

● President, Société Internationale de Chirurgie Orthopédique et de Traumatologie.2014-2016

● President, International Society for the Study of the Lumbar Spine. 2016-2017

● President, Asia Pacific Spine Society 2019-2021.

Ken Cheung

● President, Scoliosis Research Society. 2017 (the only non-North American to be elected

president in the society’s 50 year history).

● Chairman, World Forum for Spine Research. 2008 to 2016.

Dino Samartzis

● Editor-in-Chief - Scoliosis and Spinal Disorders Journal

● Deputy Editor - Global Spine Journal

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● 2017-2020 - Program Committee and Chair, International Society for the Study of the Lumbar

Spine (ISSLS)

● 2018-2021 - Chair, AOSpine International Research Commission

7.4 Any documentary proof of the application of technologies arising directly from this project?

N/A

7.5 Other awards and recognitions as a result of this project (please specify):

The team members had won 8 international, 3 local awards, 6 best paper awards, 5 best poster

awards and 2 best oral presentation awards, 7 travel awards, 3 training awards and 3 visiting

professorship and 1 senior research fellowship.

8. Impacts

8.1 What are the current and expected impacts of the project on the long-term development of Hong

Kong (social or economic development, e.g. patent, technology transfer, collaboration with

external organisations, etc.)?

● Children with rare bone diseases (Little People) and their parents often face difficulties in life

due to a lack of public awareness and misconceptions, and a lack of government and

community support. We sought to bridge communication and knowledge gaps between

affected patients, caregivers, medical professionals and the general public, whilst

simultaneously providing a platform for gaining and sharing knowledge about rare bone

diseases and treatments. Supported by the scientific and clinical knowledge base in the TRS,

and patient connections, we co-founded the “Little People of Hong Kong”, and brought

together patient groups and their families, medical professionals, schools and the general

public, to disseminate accurate information, promote inclusiveness, and to build on the positive

foundation that will make a difference. Activities included open symposia, school talks, radio

talks shows, television programmes, YouTube videos, research laboratory visits for patients,

and the publishing of a layman information book on rare skeletal diseases. Through these

activities, the team was presented with the Faculty Knowledge Exchange Award in 2017 that

provide an opportunity to initiate a “Little People have Talent” project, completed in 2018, and

showcased at the Duchess of Kent hospital Christmas Fund Raising activity.

● The wealth of data on human IVD phenotypes and IDD longitudinal follow up is a valuable

resource for further study and development of AI assisted predictive prognosis for IDD and

back pain. The two patent applications if granted will be an important source of licensing and

funding to clarify the link between EMT, HOPX, upregulated ISR and fibrosis, The successful

in vitro directed differentiation of hPSC to human NCLs and NP cells is a significant advance

and will be a foundation for work aimed at developing therapies.

8.2 Others (please specify):

9. Sustainability of the Project

9.1 Whether there are new ideas evolved directly from this project?

● With the implementation of single cell sequencing in the TRS we were motivated to employ

and develop enabling technologies for the establishment of a first of its kind atlas of human

skeletal cells across the life-span, with directly linked biophysical, transcriptome and

chromosome conformation profiles at single-cell resolution. Constructing the Human Cell

Atlas (HCA) is challenged by the enormous complexity and heterogeneity of cell types, by

their dynamic changes in intracellular signaling and biophysical properties. The biophysical

properties of a cell influence and are influenced by its molecular signature. But recording,

integrating and studying all the relevant data for individual cells requires high-throughput that

is not achievable or affordable with current technologies. Members of the TRS project have

teamed up with HK bioengineers (K. Tsia, K. Wong, H. So) to test an ultra-throughput label-

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free imaging technology that can capture more than a million single-cell quantitative phase

images in a single experimental run. It allows establishment of high-dimensional single-cell

biophysical phenotypic profiles (including cell size, morphology, dry-mass density and spatial

texture), with unprecedented label-free discrimination power for monitoring cell-cycle

progression not possible under high-throughput operation with existing imaging techniques.

Proof-of-concept work has yielded 2 publications [(#110) Multi-ATOM: Ultrahigh-throughput

single-cell quantitative phase imaging with subcellular resolution.J Biophotonics.

4:e201800479 (2019); (#109), Quantitative Cytometry for Ultra-Large-Scale Single-Cell

Biophysical Phenotyping. Cytometry Part A. doi: 10.1002/cyto.a.23765 (2019)]. The team

aims to seek funding to develop the transformative experimental and computational

technologies further, for the establishment of a Skeletal Cell Opto-Physical Enabled

Sequencing (SCOPES) Atlas that can generate deep biophysical profiles of single skeletal cells.

that are linked to their molecular signatures.

● V. Leung previously conducted a high-throughput screen of small molecules for modifying

IDD, and identified several leads which were characterized for their function in

inhibiting interleukin 1-mediated proteoglycan catabolism as well as therapeutic effects in

rodent and goat IDD models. The potential translation of these leads into new therapeutics for

alleviating IDD is supported by the AO Foundation, ITC-MRP to characterise the targets of

the leads for mechanistic insights.

● The correlation of genomic, proteomic, metabolomic, and 10 years of longitudinal clinical and

imaging follow up data motivates us to the develop predictive models for IDD using artificial

intelligence and deep learning. The application developed will generate IP that can be licensed

for usage by other institutions.

● Further to the work on defining optimal ECM composition for maintaining NP cells, a new

project was developed where we have designed and fabricated a new scaffold similar to that in

native NP. This scaffold will be used for IVD tissue engineering and cell therapy.

9.2 Whether there are new projects evolved directly from this project?

● To support the premise of the SCOPES project we obtained funding for a CRF project Multi-scale

single-cell optical imaging: architecture and biomedical applications. (K. Tsia PC, $7.3M) and

are seeking additional funding.

● The MRI dataset is being used to develop an automated diagnosis system based on computer vision

and artificial intelligence. A research officer within the Department of Orthopaedics and

Traumatology is contracted to work on this.

● Our transcriptome profiling implicated the MAPK pathway in regulating the differentiation of NP

cells. We plan to test the influence of MAPK inhibition on the iPS-to-NP cell differentiation

protocol.

9.3 Whether there are new collaborations developed directly from this project?

● Tencent Medial AI division (Tencent, Shenzhen, China) to develop an AI model for IDD.

● Cheah, Chan and Sham are active members of the Genetics of Osteoarthritis Consortium, a global

collaboration comprising 18 groups worldwide (E. Zeggini, Coordinator), with a focus on

understanding of the genetic bases of osteoarthritis and related traits (https://www.genetics-

osteoarthritis.com/home/index.html).

9.4 Please give details on how much money and from which sources has been obtained/requested

for the specific purpose of continuing the work started under this project.

While seeking new external funding, the transcriptomics (human and mouse), pluripotent stem cell

(PSC) and NP progenitor cell work have continued with the support of the Jimmy & Emily Tang

endowed professorship (~$1M) and HKU Research Committee Seed Funding grant ($0.5M) to K.

Cheah. A RGC CRF application (2019/20) entitled Functional and systems analyses of regulatory

networks controlling cell fate and lineage development of intervertebral disc cells to support further

development of research on human PSC-derived NP cells is currently pending the outcome. Work to

identify and characterise quiescent progenitors/stem cells in the mouse NP functionally, is supported

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by a GRF grant in 2019 Analyses of progenitors and differentiation trajectories in the nucleus pulposus

and their relevance in intervertebral disc degeneration. HK$ 1.5M); and work to determine the

functional relevance of NP cells expressing TAGLN and the SMAD4 pathway is supported by an

HMRF grant ($1.5M) Role(s) of TAGLN expressing cells in intervertebral disc development,

homeostasis and degeneration is supported by an HMRF grant in 2018.

10. Statistics on Research Outputs

(Please ensure the statistics in this section are consistent with the information presented in other

sections of this report.)

Peer-reviewed

journal

publications

Conference

papers

Scholarly, books,

monographs and

chapters

Patents

awarded

Other research

outputs (please

specify)

No. of outputs arising

directly from this

research project

163 74

2 filed Type No.

12. The Layman’s Summary

(describe in layman’s language the abstracts and research impact of the project.)

How genomic variation affects personal risk for degenerative skeletal disorders

基因組差異影響退化性骨骼疾病的個人風險的功能性研究

Low back pain can be intolerable for millions of people worldwide, leading to a huge

socioeconomic and health-care burden. In Hong Kong, 300,000 workdays are lost and 200

million dollars are paid for worker’s compensation. Intervertebral disc degeneration (IDD) is a

major cause of back pain, in which the cartilaginous discs between the vertebrae change in their

tissue structure and cease to function effectively to provide flexibility to the spine and protection

from mechanical loading. IDD is very common and people are affected by the age of 50 years or

older. Environmental and lifestyle factors can affect the course of disc degeneration but the

disorder also has a strong genetic component which can influence the onset and severity of

disease. However, only a few genetic factors have been identified to-date and the disease

mechanisms of IDD are poorly understood, hampering preventative measures and the

development of therapies. Key to future therapeutic and/or prognostic approaches to alleviate or

minimise the impact of IDD, is an understanding of the biology of the different components of

the spine: the discs, bone and cartilage, and mechanisms of growth, the changes accompanying

aging and causes of functional failure.

We are an internationally recognized and leading multidisciplinary team of clinicians and

scientists who have taken up the challenge, not only to identify the genetic risk factors for IDD,

but also to define how these lead to differences in the age of onset and the severity of the disease.

We used information collected about our Hong Kong population cohort, the world’s largest

group with this disorder, comprising 3,500 individuals. Data and materials included DNA

samples, spine MRI scans, demographic, environmental, lifestyle and clinical information. The

cohort was established in 2004 and participants have returned for follow up evaluation, allowing

us a unique opportunity to assess the contribution of genetics to the progression and severity of

this skeletal disorder. We have identified new subtypes of IDD, which should facilitate the

development of personalised treatment options. We have discovered several new genetic risk

factors for IDD and discovered genes and cellular signalling pathways that correlate with disease

severity, which will guide both prevention and treatment strategies. We found overlapping

genetic associations between IDD and obesity, bone mineral density and osteoarthritis, implying

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that these different disorders share common mechanisms, with implications for clinical

management.

We have provided significant new insights into the biology of the intervertebral disc and the

pathogenesis of IDD, using a combination of sophisticated mouse models and human tissues

from our clinical cohort. We described the molecular signatures of cells in the intervertebral disc

in terms of which genes are expressed and which proteins are present. We showed how these

change from embryonic stages to adolescence, adulthood and middle age. By integrating genetic,

molecular and clinical data, we showed that key steps in the development of IDD are two

processes common in development that are also activated in many other diseases: the cellular

stress response and a partial epithelial to mesenchymal transition that lead to a transformation in

the cellular identities of those cells that keep the tissue healthy. As a result the extracellular

matrix proteins made in the disc changes, altering the biomechanical properties and fibrosis

occurs. Discovering the mechanisms causing improper development of the growth plate that

mediates growth of bone, enabled us to identify a potential therapy. We tested an existing drug

that targets this stress response in a mouse model of congenital dwarfism with IDD, with

successful amelioration of disease symptoms. These exciting findings could form the basis for

the molecular therapy of dwarfism and IDD and possibly other skeletal disorders. We discovered

embryonic-like cells are present in the disc that are potential “stem cells”, which could be

responsible for maintenance of the healthy disc, and found that these decline with age and

degeneration, possibly explaining why disc repair becomes progressively less effective. We

developed a successful method for generating disc cells in culture from embryonic stem cells.

This landmark advance lays a strong basis for developing cell-based therapies for disc

regeneration. The outcomes of this project are contributing to achieving our mission to lay a

foundation for better prevention and treatment, thereby improving the healthcare and quality of

life for the millions of people suffering from spinal problems.

Page 26: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

(6.4 (a) Peer-reviewed journal publication(s) arising directly from this project: (Please attach a copy of the publication and/or the letter of acceptance if not yet submitted in the previous progress

report(s). All listed publications must acknowledge RGC’s funding support by quoting the specific grant reference.

Please mark the symbol “#” next to the publications involving inter-institutional collaborations) ^ indicates Review

articles/ commentary; TRS members/staff/post-graduate students are underlined.

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1 2013 #Liu, Z.H., Sun, Z., Wang, H.Q., Ge, J., Jiang, T.S., Chen, Y.F., Ma, Y., Wang, C., Hu, S., Samartzis, D., and *Luo, Z.J.

FasL expression on human nucleus pulposus cells

contributes to the immune privilege of intervertebral disc by interacting with immunocytes. Int J Med Sci 10: 1053-

1060.

2014 No Yes Yes

2 2013 #Samartzis, D., and *Carragee,

E.J.

Preface disc degeneration for

The Spine Journal. Spine J 13: 215-

216.

2014 No Yes Yes

3 2013 #Samartzis, D., Cheung, K.M., and Cullings,

H.M.

Samartzis et al. respond. Spine J 13:

226-228.

2014 No Yes Yes

4 2013 #Samartzis, D., Ito, K., and *Wang, J.C.

Disk degeneration and pain.

Global Spine J 3: 125-126.

2014 No Yes Yes

5 2013 #Samartzis, D., Karppinen, J., Cheung, J.P., and *Lotz, J.

Disk Degeneration and Low Back Pain:

Are They Fat-Related Conditions?

Global Spine J 3: 133-144.

2014 No Yes Yes

6 2013 # Shen, F.H., and *Samartzis,

D.

Operative Management of a Sacral Gunshot

Injury via Minimally Invasive

Techniques and Instrumentation.

Asian Spine J 7: 44-49.

2014 No Yes Yes

Appendix I

Page 27: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

7 2013 #Song, Y.Q., Karasugi, T.,

Cheung, K.M., Chiba, K., Ho, D.W., Miyake, A., Kao, P.Y., Sze, K.L., Yee, A., Takahashi, A., Kawaguchi, Y., Mikami, Y., Matsumoto, M.,

Togawa, D., Kanayama, M., Shi, D., Dai, J., Jiang, Q., Wu, C., Tian, W.,

Wang, N., Leong, J.C.,

Luk, K.D., Yip, S.P., Cherny,

S.S., Wang, J., Mundlos, S., Kelempisioti,

A., Eskola, P.J., Mannikko, M.,

Makela, P., Karppinen, J., Jarvelin, M.R., O'Reilly, P.F.,

Kubo, M., Kimura, T., Kubo, T.,

Toyama, Y., Mizuta, H.,

Cheah, K.S., Tsunoda, T., Sham, P.C.,

Ikegawa, S., and *Chan, D.

Lumbar disc degeneration is

linked to a carbohydrate

sulfotransferase 3 variant.

J Clin Invest 123: 4909-4917.

2014 No Yes Yes

8 2013 #Sun, Z., Guo, Y.S., Yan, S.J., Wan, Z.Y., Gao,

B., Wang, L., Liu, Z.H., Gao, Y., Samartzis, D., Lan, L.F., Wang, H.Q.,

and *Luo, Z.J.

CK8 phosphorylation

induced by compressive loads

underlies the downregulation of CK8 in human disc

degeneration by activating protein

kinase C. Lab Invest93: 1323-1330.

2014 No Yes Yes

Page 28: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

9 2013 #Sun, Z., Liu, Z.H., Zhao,

X.H., Sun, L., Chen, Y.F.,

Zhang, W.L., Gao, Y., Zhang,

Y.Z., Wan, Z.Y., Samartzis, D., Wang, H.Q., and *Luo, Z.J

Impact of direct cell co-cultures on

human adipose-derived stromal

cells and nucleus pulposus cells.

J Orthop Res 31: 1804-1813.

2014 No Yes Yes

10 2013 #Sun, Z., Wang, H.Q., Liu, Z.H.,

Chang, L., Chen, Y.F., Zhang, Y.Z., Zhang, W.L., Gao, Y., Wan, Z.Y., Che, L.,

Liu, X., Samartzis, D., and *Luo, Z.J.

Down-regulated CK8 expression in

human intervertebral disc

degeneration. Int J Med Sci 10:

948-956.

2014 No Yes Yes

11 2013 #Sun, Z., Zhang, M., Zhao, X.H., Liu, Z.H., Gao, Y., Samartzis,

D., Wang, H.Q., and *Luo, Z.J.

Immune cascades in human

intervertebral disc: the pros and cons.

Int J Clin Exp Pathol 6: 1009-

1014.

2014 No Yes Yes

12 2013 #Takatalo, J., Karppinen, J., Taimela, S.,

Niinimaki, J., Laitinen, J.,

Sequeiros, R.B., Samartzis, D.,

Korpelainen, R., Nayha, S.,

Remes, J., and *Tervonen, O.

Association of abdominal obesity with lumbar disc degeneration--a

magnetic resonance imaging study. PLoS One 8:

e56244. doi:

https://doi.org/10.1371/journal.pone.005

6244

2014 No Yes Yes

13 2013 Yuan, M., Yeung, C.W., Li, Y.Y., Diao,

H., Cheung, K.M., Chan, D., Cheah, K., and

*Chan, P.B.

Effects of nucleus pulposus cell-

derived acellular matrix on the

differentiation of mesenchymal stem cells. Biomaterials

34: 3948-3961.

2014 No Yes Yes

Page 29: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

14 2013 #Lv, F., Leung, V.Y., Huang, S., Huang, Y., Sun,

Y., and *Cheung, K.M.

In search of nucleus pulposus-specific

molecular markers. Rheumatology

(Oxford) 53: 600-610.

2014 No Yes Yes

15 2013 Law, T., Anthony, M.P.,

Chan, Q., Samartzis, D.,

Kim, M., Cheung, K.M., and *Khong,

P.L.

Ultrashort time-to-echo MRI of the

cartilaginous endplate: technique and association with intervertebral disc

degeneration. J Med Imaging Radiat

Oncol 57: 427-434.

2014 No Yes Yes

16 2013 #Huang, S., Leung, V.Y.,

Long, D., Chan, D., Lu, W.W., Cheung, K.M., and *Zhou, G.

Coupling of small leucine-rich

proteoglycans to hypoxic survival of a progenitor cell-

like subpopulation in Rhesus Macaque intervertebral disc. Biomaterials 34:

6548-6558.

2014 No Yes Yes

17 2013 Chen, Y.F., Zhang, Y.Z., Zhang, W.L.,

Luan, G.N., Liu, Z.H., Gao, Y.,

Wan, Z.Y., Sun, Z., Zhu, S.,

Samartzis, D., Wang, C.M., Wang, H.Q.,

and *Luo, Z.J.

Insights into the hallmarks of human

nucleus pulposus cells with particular

reference to cell viability,

phagocytic potential and long process formation. Int J

Med Sci 10: 1805-1816.

2014 No Yes Yes

18 2013 Chan, L.K., Leung, V.Y., Tam, V., Lu, W.W., Sze, K.Y., and

*Cheung, K.M.

Decellularized bovine

intervertebral disc as a natural scaffold for xenogenic cell

studies. Acta Biomater 9: 5262-

5272.

2014 No Yes Yes

Page 30: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

19 2013 Chan, C.P., Kok, K.H.,

Tang, H.M., Wong, C.M.,

and *Jin, D.Y.

Internal ribosome entry site-mediated

translational regulation of ATF4

splice variant in mammalian

unfolded protein response. Biochim Biophys Acta 1833:

2165-2175.

2014 No Yes Yes

20 2014 Chan, W.C., Au, T.Y., Tam, V., Cheah, K.S.,

and *Chan, D.

Coming together is a beginning: the

making of an intervertebral disc. Birth Defects Res C

Embryo Today.;102(1):83-

100. doi:

10.1002/bdrc.21061.

2015 No Yes Yes

21 2014 Cheung KMC, Lam JWN,

Samartzis D, Lu W, *Luk KDK,

The use of a modified fulcrum

for fulcrum bending radiographs: a technical note.

Journal of Orthopaedic

Surgery Vol 22 No. 2, Pages 248-51.

2015 No Yes Yes

22 2014 Cheung, J., Samartzis, D,

*Cheung, K.M.C.

A novel approach to gradual correction

of severe spinal deformity in a

pediatric patient using the

magnetically-controlled growing rod. Spine J; 14:e7-

e13.

2015 No Yes Yes

23 2014 Cheung, J., Samartzis, D.,

Shigematsu, H., Cheung, K. M.

C.

Defining clinically-relevant values for

developmental spinal stenosis: a

large-scale magnetic resonance

imaging study. Spine; 39: 1067-76.

2015 No Yes Yes

Page 31: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

24 2014 #Eskola, P.J., Mannikko, M., Samartzis, D., *Karppinen, J.

^Genome-wide association studies

of lumbar disc degeneration - are

we there yet? Spine J; 14:479-82.

2015 No Yes Yes

25 2014 Leung, V.Y., Aladin, D.M.,

Lv, F., Tam, V., Sun, Y., Lau, R.Y., Hung, S.C., Ngan,

A.H., Tang, B., Lim, C.T., Wu,

E.X., Luk, K.D.K., Lu,

W.W., Masuda, K., *Chan, D.,

*Cheung, K.M.C

Mesenchymal stem cells reduce

intervertebral disc fibrosis and

facilitate repair. Stem cells 32:2164-

77.

2015 No Yes Yes

26 2014 #Luk, K.D.K., Saw, L.B.,

Grozman, S., Cheung, K.M.C.,

*Samartzis, D.

The Spine Journal Best Paper Runner-Up - Assessment of skeletal maturity: a new classification

scheme using distal radius and ulna

radiographs. Spine J; 14:315-25.

2015 No Yes Yes

27 2014 Ma, C. J., Liu, X., Che, L., Liu,

Z., Samartzis, D., *Wang, H.

Q.

Stem cell therapies for intervertebral disc degeneration: immune privilege reinforcement by

Fas/FasL regulating machinery. Curr

Stem Cell Res; 19: 285-95.

2015 No Yes Yes

28 2014 #Samartzis D, Borthakur A,

Belfer I, Bow C, Lotz JC, Wang HQ, Cheung

KMC, Carragee E, *Karppinen J.

Novel diagnostic and prognostic

methods for disc degeneration and

low back pain. Spine J

;15(9):1919-32. doi: 10.1016/j.spinee.20

14.09.010.

2015 No Yes Yes

Page 32: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

29 2014 Tam, W.K., Cheung, K.M.C.,

*Leung, V.Y.L.

Intervertebral Disc Engineering

through Exploiting Mesenchymal Stem Cells: Progress and

Perspective. Curr Stem Cell Res Ther;11(6):505-512.

2015 No Yes Yes

30 2014 Tsang, KY., Tsang, SW.,

Chan, D., and *Cheah, K.S.E

The chondrocytic journey in

endochondral bone growth and skeletal

dysplasia. Birth defects research Part C, Embryo

today: reviews 102, 52-73.

/ No Yes Yes

31 2014 #Von Forell, G., Nelson, T.,

Samartzis, D., *Bowden, A. E.

Changes in vertebral strain energy correlate with increased

presence of Schmorl’s nodes in multi-level lumbar disc degeneration. J Biomech Eng; 136:

061002.

2015 No Yes Yes

32 2014 #Wan, Z.-Y., Song, F., Sun,

Z., Chen, Y.-F., Zhang, W.-L., Ma, C.-J., Che,

L., Liu, X., Samartzis, D.,

Ali, M. A., Wang, H.-Q., *Luo, Z.-J.

Aberrantly expressed long

noncoding RNAs in human

intervertebral disc degeneration: a

microarray related study. Arthritis Res

Ther; 16: 465.

/ No Yes Yes

33 2014 Wang, H.Q., Yu, X.D., Liu,

Z.H, *Samartzis D.

Clarifying the nomenclature of

intervertebral disc degeneration and

displacement: from bench to bedside.

Int J Clin Exp Pathol; 7:1293-8.

2015 No Yes Yes

Page 33: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

34 2014 Yim, R.L.-H., Lee, J., Bow,

C.H., Meij, B., Leung, V.Y.L.,

Cheung, K.M.C.,

Vavken, P., and *Samartzis, D.

A systematic review of the safety and

efficacy of mesenchymal stem

cells for disc degeneration: new insights and future

directions for regenerative therapeutics.

Stem Cells Dev 23:2553-2567

2015 No Yes Yes

35 2014 Li, Y., Diao, H., Chik, T., Chow,

S., An, X., Leung, V.,

Cheung, K., and *Chan, B.

Delivering mesenchymal stem

cells (MSCs) in collagen

microsphere carriers to rabbit

degenerative disc - Reduced risk of

osteophyte formation.

Tissue Eng PartA.20:1379-91

2014 No Yes Yes

36 2014 #Londono, D., Kou, I.,

Johnson, T.A., Sharma, S., Ogura, Y.,

Tsunoda, T., Takahashi, A.,

Matsumoto, M., Herring, J.A.,

Lam, T.P., Wang, X., Tam,

E.M., Song, Y.Q., Fan, Y.H.,

Chan, D., Cheah, K.S.,

Qiu, X., Jiang, H., Huang, D.,

Su, P., Sham, P., Cheung, K.M.,

Luk, K.D., Gordon, D.,

Qiu, Y., Cheng, J., Tang, N.,

Ikegawa, S., and *Wise, C.A.

A meta-analysis identifies adolescent idiopathic scoliosis

association with LBX1 locus in multiple ethnic groups. J Med

Genet.51:401-406

2014 No Yes Yes

Page 34: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

37 2014 #Luk, K.D., Saw, L.B.,

Grozman, S., Cheung, K.M., and *Samartzis,

D.

Assessment of skeletal maturity in scoliosis patients to determine clinical

management: a new classification

scheme using distal radius and ulna

radiographs. Spine J14: 315-325.

2014 No Yes Yes

38 2014 Lv, F.J., Tuan, R.S., Cheung,

K.M., and *Leung, V.Y.

Concise review: the surface markers and identity of human

mesenchymal stem cells. Stem Cells 32:

1408-1419.

2014 No Yes Yes

39 2014 #Tam, V., Rogers, I., Chan, D.,

Leung, V.Y., and *Cheung,

K.M.

A comparison of intravenous and

intradiscal delivery of multipotential stem cells on the healing of injured intervertebral disk. J Orthop Res 32:

819-825.

2014 No Yes Yes

40 2014 Yang, L., Tsang, K.Y., Tang,

H.C., Chan, D. and *Cheah,

K.S.E.

Hypertrophic chondrocytes can

become osteoblasts and osteocytes in

endochondral bone formation.

Proc Natl Acad Sci U S A.;

111(33):12097-102. doi:

10.1073/pnas.1302703111.

2014 No Yes Yes

41 2015 #Cheung JP, Cahill P, Yaszay

B, Akbarnia BA, *Cheung

KM.

^Special article: Update on the magnetically

controlled growing rod: tips and

pitfalls. J Orthop Surg (Hong

Kong). : 23(3):383-90.

2015 No Yes Yes

Page 35: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

42 2015 Cheung KMC ^Commentary on: “Symptomatic Triple-Region Spinal Stenosis

Treated with Simultaneous Surgery: Case

Report and Review of the Literature” Global Spine J,

v.5(6);

2015 No Yes Yes

43 2015 #Huang, Y.H., Jankowski, A., Cheah, K.S.E.,

*Jauch, R.

SOXE transcription factors from

selective dimers on non-compact DNA

motifs through multifaceted interactions

between dimerization and

high-mobility group domains. Nature Scientific Reports

5:10398.

2015 No Yes Yes

44 2015 Lee JTY, Cheung KMC, *Leung VYL

Extraction of RNA from tough tissues

with high proteoglycan

content by cryosection, second

phase separation and high salt precipitation.

Journal of Biological Methods,

doi: 10.14440/jbm.2015.

40

2015 No Yes Yes

45 2015 Lee, J. T., *Cheung, K. M., and *Leung, V.

Y.

Systematic study of cell isolation from

bovine nucleus pulposus:

Improving cell yield and experiment

reliability. J Orthop Res 33, 1743-1755

2015 No Yes Yes

46 2015 Luk, K. D. K., *Samartzis, D.

Intervertebral disc “dysgeneration”.

Spine J; 15: 1915-8.

2015 No Yes Yes

Page 36: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

47 2015 #Maatta, J., Karppinen, J., Luk, K. D. K., Cheung, K. M. C., *Samartzis,

D.

Phenotype profiling of Modic changes

of the lumbar spine and its association

with other MRI phenotypes: a large-scale, population-based study. Spine

J; 15: 1933-42.

2015 No Yes Yes

48 2015 Samartzis D, Leung Y,

Shigematsu H, Natarajan D,

Stokes O, Mak KC, Yao G, Luk

KDK, and *Cheung KMC,

Selection of fusion levels using the fulcrum bending

radiograph for the management of

adolescent idiopathic scoliosis

patients with alternate level pedicle screw

strategy: clinical decision-making and outcomes,

PLoS One, v. 10 n. 8, p. e0120302,

DOI: http://dx.doi.org/10.1371/journal.pone.0

120302

/ No Yes Yes

49 2015 #Samartzis, D. , Gillis, C. C.,

Shih, P., O’Toole, J.E., Fessler, R.G.

Intramedullary spinal cord tumors:

Part I - epidemiology,

pathophysiology, and diagnosis.

Global Spine J; 5: 425-35.

/ No Yes Yes

50 2015 Sun, Y., Lv, M., Zhou, L., Tam,

V., Lv, F., Chan, D., Wang, H.,

Zheng, Z., *Cheung, K. M., and *Leung, V.

Y.

Enrichment of committed human nucleus pulposus cells expressing

chondroitin sulfate proteoglycans under

alginate encapsulation. Osteoarthritis

Cartilage 23(7):1194-203

2015 No Yes Yes

Page 37: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

51 2015 #Sun, Z., Luo, B., Liu, Z.,

Samartzis, D., Liu, Z., Gao, B.,

Huang, L., *Luo, Z.

Adipose-derived stromal cells protect intervertebral disc

cells in compression:

implications for stem cell

regenerative disc therapy. Int J Biol Sci; 11: 133-43.

2015 No Yes Yes

52 2015 Tsang, K.Y., Chan, D.,

*Cheah, K.S.E.

^Fate of growth plate hypertrophic

chondrocytes: death or lineage extension?

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2015 No Yes Yes

53 2015 #Vavken, P., Ganal-Antonio,

A. K. B., Quidde, J., Shen, F. H., Chapman, J., *Samartzis,D.

Fundamentals of clinical outcomes

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2015 No Yes Yes

54 2015 #Vavken, P., Ganal-Antonio, A. K. B., Shen, F. H., Chapman, J., *Samartzis,

D.

Fundamentals of clinical outcomes

assessment for spinal disorders: study designs,

methodologies, and analyses. Global Spine J; 5:156-64

2015 No Yes Yes

55 2015 #Von Forell, G., Stephens, T. K., *Samartzis, D., Bowden, A. E.

Low back pain: A biomechanical

rationale based on “patterns” of disc

degeneration. Spine;40(15):1165-72.

doi: 10.1097/BRS.00000

00000000982.

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asterisk*)

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and other necessary publishing details

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the relevant progress report)

Attached to this report (Yes or

No)

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RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

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but not yet published)

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Under preparat

ion (optiona

l)

56 2015 Wang Y, Cheung JP,

*Cheung KMC.

Use of PET/CT in the early diagnosis of implant related wound infection and avoidance of

wound debridement.

European Spine Journal, DOI:

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/ No Yes Yes

57 2015 #Wang, A.M., Cao, P., Yee, A.,

Chan, D., and *Wu, E.X.

Detection of extracellular matrix

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5289.

No

58 2016 Chooi WH, *Chan BP.

Compression loading-induced

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Scientific Reports; 6:26449. doi:

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2017 No Yes No

59 2016 #Chooi WH, Chan A,

Gantenbein-Ritter B, *Chan

BP

Loading-Induced Heat Shock

Response in the Intervertebral Disc.

PLoS One. 11(8):e0161615.

doi: 10.1371/journal.pon

e.0161615

2017 No Yes No

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and other necessary publishing details

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(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

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institutional repository (Yes or No)

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but not yet published)

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ion (optiona

l)

60 2016 #Teraguchi, M., Samartzis, D.,

Hashizume, H., Yamada, H.,

Muraki, S., Oka, H., Cheung, J.P.-Y., Kagotani, R.,

Iwahashi, H., Tanaka, S.,

Kawaguchi, H., Nakamura, K.,

Akune, T., Cheung, K.M., Yoshimura, N., and *Yoshida,

M.

Classification and determinants of

high intensity zones of the lumbar spine and its association with other spinal MRI phenotypes:

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One DOI:

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2017 No Yes Yes

61 2016 #Rajasekaran, S., Kanna, R.M.,

Reddy, R.R., Natesan, S.,

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K.M.C., Chan, D., Kao, P.Y.P., Yee, A., *Shetty

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How reliable are the reported genetic

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62 2016 Cheung JP, Cheung PW,

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Decompression without Fusion for

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Spondylolisthesis. Asian Spine J. (1):75-84. doi:

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2016 No Yes Yes

63 2016 Cheung JP, Samartzis D, Cheung PW,

*Cheung KM, *Luk KD.

Reliability Analysis of the Distal Radius

and Ulna Classification for

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Idiopathic Scoliosis. Global Spine J. ;6(2):164-8. doi: 10.1055/s-0035-

1557142

2016 No Yes Yes

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asterisk*)

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and other necessary publishing details

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(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

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Under preparat

ion (optiona

l)

64 2016 #Dudli, S., Fields, A. J.,

Samartzis, D., Karppinen, J.,

Lotz, J. C. (2016)

Pathobiology of Modic changes. Eur

Spine J;25(11):3723-

3734.

2016 No Yes Yes

65 2016 #Ganal-Antonio, A.K.B.,

Samartzis, D., Bow, C.H.,

Cheung, K.M.C., Luk,

K.D.K, *Wong, Y.W.

Disappearing bone disease of the

humerus and the cervico-thoracic

spine: a case report with 40 year follow-up. Spine J 2:e67-

75

2016 No Yes Yes

66 2016 #Grad, S., Bow, C., Karppinen, J., Luk, K. D.

K., Cheung, K. M. C., Alini, M.,

Samartzis, D.

Systemic blood plasma CCL5 and CXCL6: potential

biomarkers for human lumbar disc

degeneration. Eur Cells Mat; 31:

1-10.

2016 No Yes Yes

67 2016 #Kamath VH, Cheung JP, Mak KC, Wong YW,

Cheung WY, Luk KD,

*Cheung KM.

Antimicrobial prophylaxis to

prevent surgical site infection in adolescent

idiopathic scoliosis patients undergoing

posterior spinal fusion: 2 doses

versus antibiotics till drain removal.

Eur Spine J. ;25(10):3242-

3248.

2016 No Yes Yes

68 2016 #Kudelko, M., Chan, C. W., Sharma, R.,

Yao, Q., Lau, E., Chu, I. K., Cheah, K. S.,

Tanner, J. A. & * Chan, D.

Label-Free Quantitative

Proteomics Reveals Survival

Mechanisms Developed by Hypertrophic

Chondrocytes under ER Stress. Journal

of Proteome Research, 15, 86-

99.

2016 No Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

69 2016 Kudelko, M., Sharma, R.,

Cheah, K. S. & *Chan, D.

Comparison of proteomic datasets from hypertrophic chondrocytes in response to ER

stress. Data in Brief, 7,

449-51. doi:

10.1016/j.dib.2016.02.065.

2016 No Yes Yes

70 2016 #Liu, Z.-H. L., Huo, J.-L., Zhi-Gang, W., Sun,

Z., Bai, F., Samartzis, D.,

Gantenbein, B., Fan, S.-D.,

Wang, H. Q.

RASSF7 expression and its regulatory roles on apoptosis

in human intervertebral disc

degeneration. Int J Clin Exp

Pathol ; 8: 16097-103.

2016 No Yes Yes

71 2016 Mok, F., Samartzis, D., Karppinen, J., Fong, D. Y. T.,

Luk, K. D., Cheung, K. M.

Modic changes of the lumbar spine: prevalence, risk

factors and association with

disc degeneration and low back pain

in a large-scale population-based

cohort. Spine J; 16: 32-41.

2016 No Yes Yes

72 2016 #Samartzis, D., Bow, C. H., Cheung, J.,

Sham, P., Mak, K.-C., Cheung, W.-Y., Wong, Y.-W., Luk, K. D. K., Cheung, K., *Lawmin,

J.-C.

Efficacy of postoperative pain management using continuous local

anesthetic infusion at the iliac crest bone graft site in

adolescent idiopathic scoliosis patients: a parallel,

double-blinded,randomized

controlled pilot trial. Global Spine

J; 6: 220-8.

2016 No Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

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Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

73 2016 #Samartzis, D., Cheung, J.,

Rajasekaran, S., Kawaguchi, Y.,

Acharya, S., Kawakami,

M., Satoh, S., Chen, W.-J., Park, C.-K., Lee, C.-S.,

Foocharoen, T., Nagashima, H., Kuh, S., Zheng, Z., Condor, R.,

Ito, M., Iwasaki, M., Jeong, J. H., Luk, K. D. K.,

Prijambodo, B., Rege, A., Jahng, T.-A., Luo, Z., Tassanawipas,

W. A., Acharya, N.,

Pokharel, R., Shen, Y., Ito, T.,

Zhang, Z., Aithala, J.,

Kumar, G. V., Jabir, R. A.,

Basu, S., Li, B., Moudgil, V.,

Sham, P., Williams, R.

Is lumbar facet joint tropism

developmental or secondary to

degeneration? An international, large-

scale multicenter study by the

AOSpine Asia Pacific Research

Collaboration Consortium.

Scoliosis and Spinal Disord; 11: 9.

2016 No Yes Yes

74 2016 #Samartzis, D., Gillis, C., Shih, P., O’Toole, J. E., Fessler, R.

G.

Intramedullary spinal cord tumors:

part II — management options and

outcomes. Global Spine J; 6:176-85.

2016 No Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

75 2016 #Tomkins-Lane, C., Melloh, M.,

Lurie, J., Smuck, M.,

Freeman, B., Samartzis, D.,

Hu, R., Barz, T., Stuber, K.,

Schneider, M., Haig, A.,

Schizas, C., Cheung, J. P.-

Y., Mannion, A.,

Staub, L., Comer, C., Macedo, L., Ahn, S.-h.,

Takahashi, K., Sandella, D.,

Battie, M.

Consensus on the clinical diagnosis of

lumbar spinal stenosis: results of

an international Delphi study. Spine

(Phila Pa 1976); 1;41(15):1239-46.

doi: 10.1097/BRS.00000

00000001476.

2016 No Yes Yes

76 2016 #Wang W, Li TL, Wong HM, Chu PK, Kao RY, Wu S, Leung FK,

Wong TM, To MK, Cheung KM, *Yeung

KW.

Development of novel implants with

self-antibacterial performance

through in-situ growth of 1D ZnO nanowire. Colloids

Surf B Biointerfaces.

1;141:623-33. doi: 10.1016/j.colsurfb.2

016.02.036

2016 No Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

77 2016 #Williams, R., Cheung, J., Goss, B.,

Rajasekaran, S., Kawaguchi, Y.,

Acharya, S., Kawakami, M., Satoh, S., Chen, W.-J., Park, C.-K., Lee, C.-S.,

Foocharoen, T., Nagashima, H., Kuh, S., Zheng, Z., Condor, R.,

Ito, M., Iwasaki, M., Jeong, J. H.,

Luk, K., Prijambodo, B., Rege, A., Jahng, T.-A., Luo, Z., Tassanawipas, W. A.,Acharya, N., Pokharel, R., Shen, Y., Ito, T.,

Zhang, Z., Aithala, J.,

Kumar, G. V., Jabir, R. A.,

Basu, S., Li, B., Moudgil, V.,

Sham, P., Samartzis, D.

An international multi-center study

assessing the role of ethnicity upon

variation of lumbar facet joint

orientation and the occurrence of degenerative

spondylolisthesis in Asia Pacific: a study from the

AOSAP Research Collaboration

Consortium. Global Spine J; 6: 35-45.

2016 No Yes Yes

78 2016 #Y. Li, D. Samartzis, D. Campbell, S.

Cherny, K. M.C. Cheung, K.D.K.

Luk, J.Karppinen,

Y.Q. Song, K. Cheah,, D.

Chan, *P.C. Sham

Two Subtypes of Intervertebral Disc

Degeneration Distinguished by

Large-scale Population-based Study. Spine J.

pii: S1529-9430(16)30095-X.

doi: 10.1016/j.spinee.20

16.04.020.

2016 No Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

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Under preparat

ion (optiona

l)

79 2016 Yee A., Lam P.Y., Tam V., Chan W.C.W.,

Chu I.K., Cheah K.S.E., *Cheung

K.M.C. and *Chan D

Fibrotic-like changes in

degenerate human intervertebral discs

revealed by quantitative

proteomic analysis. Osteoarthritis

Cartilage 24:503-13 (2016). Proteomic

changes in degenerate human intervertebral discs

revealed by quantitative

proteomic analysis. Osteoarthritis and

Cartilage. 24: 503-513

2016 No Yes Yes

80 2016 MJ Li, Z Pan, Z Liu, J Wu, P Wang, Y Zhu, F Xu, Z Xia, PC Sham.

Predicting regulatory variants with composite statistic Bioinformatics 32 (18), 2729-2736, 2016

No

81 2016 #Zhao Y, Wong HM, Lui SC,

Chong EY, Wu G, Zhao X,

Wang C, Pan H, Cheung KM,

Wu S, Chu PK, *Yeung KW.

Plasma Surface Functionalized

Polyetheretherketone for Enhanced

Osseo-Integration at Bone-Implant Interface. ACS

Applied Materials Interfaces;8(6):390

1-11. doi: 10.1021/acsami.5b1

0881.

2016 No Yes Yes

82 2016 #Maatta, J., Karppinen, J., Paananen, M., Bow, C., Luk,

K. D. K., Cheung, K. M.

C., Samartzis, D.

Refined phenotyping of Modic changes:

potential imaging biomarkers of

prolonged severe low back pain and

disability. Medicine.95: e3495.

2016 No Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

83 2016 #Samartzis, D., Cheung, J.,

Rajasekaran, S.,Kawaguchi,

Y., Acharya, S., Kawakami,

M., Satoh, S., Chen, W.-J., Park, C.-K., Lee, C.-S.,

Foocharoen, T.,Nagashima,

H.,Kuh, S., Zheng, Z.,

Condor, R., Ito, M., Iwasaki, M.,

Jeong, J. H., Luk, K.,

Prijambodo, B., Rege, A., Jahng, T.-A., Luo, Z., Tassanawipas,

W. A., Acharya, N.,

Pokharel, R., Shen, Y., Ito, T.,

Zhang, Z., Aithala, J.,

Kumar, G. V., Jabir, R. A.,

Basu, S., Li, B., Moudgil, V.,

Goss, B., Sham, P., Williams, R.

Critical values of facet joint

angulation and tropism in the

development of lumbar degenerative

spondylolisthesis: an international,

large-scale multicenter study by the AOSpine

Asia Pacific Research

Collaboration Consortium. Global Spine J; 6: 414-21.

2016 No Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

84 2016 Samartzis, D., Mok, F. P. S.,

(Joint First Authors),

Karppinen, J., Fong, D. Y. T.,

Luk, K. D., K.,

Cheung, K. M. C.

Lumbar disc degeneration is

linked to a carbohydrate

sulfotransferase 3 variantof the lumbar

spine and association with

disc degeneration: a large-scale

population-based MRI study.

Osteoarthritis Cartilage.

doi: http://dx.doi.org/10.1016/j.joca.20

16.04.020

2016 No Yes Yes

85 2016 #Mhuiris, A. N., Volken, T., Elliott, J.,

Hoggarth, M., Samartzis, D., *Crawford, R.

Reliability of quantifying the

spatial distribution of fatty infiltration

in lumbar paravertebral

muscles using a new segmentation

method for T1-weighted MRI.

BMC Musculoskelet Disord; 17: 234.

doi: 10.1186/s12891-

016-1090-z

/ No Yes No

86 2017 # Zhang Z, Zhang Y, Gao F,

Han S, Cheah KS, Tse HF,

*Lian Q.

CRISPR/Cas9 Genome-Editing

System in Human Stem Cells: Current Status and Future

Prospects. Mol Ther Nucleic Acids. 9:230-241. doi:

10.1016/j.omtn.2017.09.009.

N/A Yes Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

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Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

87 2017 #Chan, W.C.W., Tsang, K.Y., Cheng, Y.W., Ng, V.C.W.,

Chik, H., Tan, Z.J., Boot-

Handford, R., Boyde, A., Cheung,

K.M.C., Cheah, K.S.E., and *Chan, D.

Activating the unfolded protein

response in osteocytes causes

hyperostosis consistent with

craniodiaphyseal dysplasia. Human

Molecular Genetics.doi:10.1093/hmg/dd

x339

2017 Yes Yes Yes

88 2017 #He, S., Xue, W., Duan, Z.,

Sun, Q., Li, X., Gan, H., Huang, J., and *Qu, J.Y.

Multimodal nonlinear optical

microscopy reveals critical role of kinesin-1 in

cartilage development.

Biomed Opt Express8: 1771-1782.

2017 Yes Yes Yes

89 2017 Leung V.Y., Zhou L., Tam W.K., Sun Y.,

Lv F., Zhou G., and *Cheung

K.M.

Bone morphogenetic prot

ein -2 and -7 mediate the

anabolic function of nucleus pulposus cells with discrete

mechanisms. Connect Tissue Res

19:1-13.qqq

2017 Yes Yes Yes

90 2017 #Pang, S.Y., Hsu, J.S., Teo, K.C., Li, Y.,

Kung, M.H.W., Cheah, K.S.E.,

Chan, D., Cheung,

K.M.C., Li, M., Sham, P.C., and

*Ho, S.L.

Burden of rare variants in ALS genes influences

survival in familial and sporadic ALS.

Neurobiol Aging 58: 238 e239-238 e215.

Used our HK population Cohort

as controls

2017 Yes Yes Yes

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corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

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(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

91 2017 #Wang, Y., Wu, M.H., Cheung, M.P.L., Sham,

M.H., Akiyama, H., Chan, D.,

Cheah, K.S.E., and *Cheung,

M.

Reprogramming of Dermal Fibroblasts

into Osteo-Chondrogenic Cells

with Elevated Osteogenic Potency

by Defined Transcription

Factors. Stem Cell Reports; 8(6): 1587–1599.

doi: 10.1016/j.stemcr.20

17.04.018

2017 Yes Yes Yes

92 2017 #Zehra, U., Bow, C., Lotz, J.C., Williams,

F.M.K., Rajasekaran, S., Karppinen, J., Luk, K.D.K.,

Battie, M., and *Samartzis, D.

Structural vertebral endplate

nomenclature and etiology: a study by

the ISSLS Spinal Phenotype Focus

Group. Eur Spine J.

;27(1):2-12. doi: 10.1007/s00586-

017-5292-3.

2017 Yes Yes Yes

93 2017 Liu J.AI., Rao, YX., Cheung, M.P.L., Hui, M.N., Wu,

M.H., Chan, L,K., Ng, I.O.L., Niu, B., Cheah, K.S.E., Sharma, R., Hodgson, L and *Cheung,

M.

Asymmetric localisation of

DLC1 defines avian trunk neural crest

polarity for directional

delamination and migration.

Nat Commun. ;8(1):1185. doi: 10.1038/s41467-

017-01107-0.

N/A Yes Yes N/A

94 2017 W.C.W. Chan, A.S. Shah, M.

A.Nieto, K.S.E. Cheah and *D.

Chan

Contribution of hypertrophic

chondrocytes to homeostasis of the annulus fibrosis in

normal and degenerative

intervertebral discs. Global Spine

Journal 06(S 01) · doi: 10.1055/s-0036-1582619

N/A Yes Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

95 2017 Li M, Li J, Li MJ, Pan Z, Hsu

JS, Liu DJ, Zhan X, Wang J,

Song Y, Sham PC.

Robust and rapid algorithms facilitate large-scale whole

genome sequencing downstream

analysis in an integrative

framework. Nucleic Acids Res. 2017

May 19;45(9):e75.

Yes Yes Yes

96 2017 Fan Y, Song YQ PyHLA: tests for the association between HLA

alleles and diseases. BMC

Bioinformatics. 2017 Feb

6;18(1):90.

Yes Yes Yes

97 2018 #Pang, H., Bow, C., Cheung,

JPY, Zehra, U., Borthakur, A., Karppinen, J.

Inoue, N., Wang, H.Q., Luk, K.D.K.,

Cheung, K.M.C.,

*Samartzis, D.

The UTE Disc Sign on MRI: A Novel

Imaging Biomarker Associated With

Degenerative SpineChanges, Low Back Pain, and Disability. Spine; 43(7):503-

511. doi: 10.1097/BRS.00000

00000002369..

N/A Yes Yes Yes

98 2018 #Zhang Y, Xiong C,

Kudelko M, Li Y, Wang C,

Wong YL, Tam V, Rai MF, Cheverud J, Lawson HA,

Sandell L, Chan WCW, Cheah

KSE, Sham PC, *Chan D

Early onset disc degeneration in SM/J mice is

associated with ion transport systems

and fibrotic changes.

Matrix Biol. pii: S0945-053X

(18)30076-3. doi: 10.1016/j.matbio.20

18.03.024.

N/A Yes Yes Yes

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

99 2018 Yuan MT, Pai PJ, Liu XF, Lam

H, *Chan BP.

Proteomic Analysis of Nucleus

Pulposus Cell-derived

Extracellular Matrix Niche and Its Effect

on Phenotypic Alteration of

Dermal Fibroblasts.Scientific Reports

8(1), 1512 https://doi.org/10.10

38/s41598-018-19931-9

N/A Yes Yes Yes

100 2018 Wang, Y.X., Leung, K.K.H.,

Sham, M.H., Chan, D.,

Cheah, K.S.E and *Cheung M.

Reprogramming of mouse calvarial osteoblasts into

induced pluripotent stem cells. Stem

Cells InternationalVolume, Article ID 5280793, 11 pages

https://doi.org/10.1155/2018/5280793

N/A Yes Yes Yes

101 2018 ZJ Tan, B Niu, KY Tsang, IG Melhado, S.

Ohba, X. He, A. P. McMahon,

Y.H. Huang, R. Jauch, M.Q

Zhang, D. Chan, *KSE Cheah.

Synergistic co-regulation and

competition by a SOX9-GLI-FOXA

phasic transcriptional

network coordinate chondrocyte

differentiation transitions. PLoS Genet

; 14(4): e1007346.doi:

10.1371/journal.pgen.1007346

N/A Yes Yes Yes

102 2018 C. Wang, Z. Tan, K.Y.

Tsang, K. K. H. Leung, N. Dung, B. Niu, D. Ron,

D. Chan, *K.S.E. Cheah.

Inhibiting the integrated stress

response pathway prevents aberrant

chondrocyte differentiation

thereby alleviating chondrodysplasia.eLife.; 7: e37673.

doi: 10.7554/eLife.3767

3

N/A Yes Yes Yes

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

103 2018 Zehra,U., Bow, C., Cheung,

JPY, Pang H., Lu, W.

Samartzis, D.*

The association of lumbar

intervertebral disc calcification on

plain radiographs with the UTE Disc

Sign on MRI. European Spine

Journal ; 27(5):1049-1057.

doi: 10.1007/s00586-

017-5312-3. Epub 2017 Oct 9.

N/A Yes Yes N/A

104 2018 X. Zhou, Y. Li, J. Karppinen, Y-

Q Song, C-L. Cheung, D.

Samartzis, D. Chan, S. Ikegawa,

K.M.C. Cheung, arcOGEN

Consortium, K.S.E. Cheah,

and *P. C. Sham

Trans-ethnic polygenic analysis supports genetic

overlap of lumbar disc degeneration with height, body mass index, and

bone mineral density.

Front Genet; 9: 267.doi:

10.3389/fgene.2018.00267

N/A Yes Yes N/A

105 2018 Tam, V., Chan W, Leung V,

Cheah K, Cheung K, Sakai D,,

McCann MR, Bedore J,

Séguin CA, *Chan, D.

Histological and reference system for

the analysis of mouse

intervertebral disc.J Orthop Res. ;

36(1):233-243. doi: 10.1002/jor.23637.

N/A Yes Yes No

106 2018 Cheung, J., Kao, P., Pak, S., Cheah, K., Chan, D.,

Cheung, K., and *Samartzis, D.

Etiology of developmental

spinal stenosis: a genome-wide

association study. J Orthop Res.

;3 6(4):1262-1268. doi:

10.1002/jor.23746..

N/A Yes Yes No

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

107 2018 Sun Y, Leung VYL, *Cheung

KMC

Clinical trials of intervertebral disc

regeneration: current status and

future developments. Int

Orthop. doi: 10.1007/s00264-

018-4245-8

N/A Yes Yes N/A

108 2019  Lee K.S., Yip M.S., Lam T.K.,

Song Y.Q., Cheah K.S.E.,

Cheung K.M.C. and Chan Danny.

Molecular basis of Asporin as a genetic

risk factor for intervertebral disc

degeneration. Matrix Biology

Europe Meeting, Manchester,

England, July 21-24, 2018.

International Journal of

Experimental Pathology, 99(6):

A34.

N/A Yes Yes N/A

10098 2019 LyF, Cheung KMC, Zheng ZM, Wang H,

Sakai D, Leung VYL

IVD progenitor cells: a new horizon for understanding disc homeostasis and repair. Nature

Reviews Rheumatology 15, p102-112 January

2019. DOI: 10.1038/s41584-

018-0154-x

N/A Yes Yes N/A

11009 2019  Lee KCM, Wang M, Cheah KSE, Chan GCF, So HKH, Wong KKY, Tsia KK.

Quantitative Phase Imaging Flow Cytometry for

Ultra-Large-Scale Single-Cell Biophysical

Phenotyping. Cytometry A. 2019 May;95(5):510-520.

doi: 10.1002/cyto.a.2376

5. Epub 2019 Apr 22.

Yes Yes

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1110 2019 Lee KCM, Lau AKS, Tang

AHL, Wang M, Mok ATY,

Chung BMF, Yan W, Shum

HC, Cheah KSE, Chan

GCF, So HKH, Wong KKY,

Tsia KK.

Multi-ATOM: Ultrahigh-throughput single-cell quantitative phase imaging with subcellular resolution. J Biophotonics. 2019 Jul;12(7):e201800479. doi:10.1002/jbio.201800479. Epub 2019 Apr 1

Yes Yes

1121 2019 #F. Chen, W.C.W.

Chan,Y. Lam, X. Wang, P.

Chen, B. Niu, Ng V.C.W.,J.C. Yeo, S. Stricker, K.S.E. Cheah, M. Koch, S.

Mundlos, H.H. Ng and D. Chan

Lgr5 and Col22a1 Mark Progenitor

Cells in the Lineage toward Juvenile

Articular Chondrocytes, Stem Cell Reports, 13: 1-

17, doi.org/10.1016/j.stemcr.2019.08.006

Yes Yes

1132 2019 #D.A. Kaji, Z.J. Tan, G.L. Johnson, W. Huang, K. Vasquez, J.A. Lehoczky, *B. Levi, *K.S.E. Cheah, *A.H. Huang.

Cellular plasticity in musculoskeletal

development, regeneration, and disease. J Orthop

Res. doi: 10.1002/jor.24523.

[Epub ahead of print] Review.

PMID: 31721278

Yes Yes

1143 2019 #S. A. Ali, B. Niu, K.S.E. Cheah, *B. Alman.

Unique and overlapping GLI1

and GLI2 transcriptional

targets in neoplastic chondrocytes.

PLoS One. 29;14(1):e0211333.

doi: 10.1371/journal.pon

e.0211333.

N/A Yes Yes Yes

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1154 2019 #Takeda K, Kou I, Otomo N, Grauers A, Fan YH, Ogura Y, Takahashi Y, Momozawa Y, Einarsdottir E, Kere J; Japan Scoliosis Clinical Research Group (JSCRG), Matsumoto M, Qiu Y, Song YQ, Gerdhem P, Watanabe K, Ikegawa S.

A multiethnic meta-analysis defined the

association of rs12946942 with severe adolescent

idiopathic scoliosis. J Hum Genet. 2019 May;64(5):493-498.

Yes yes yes

1165 2019 Yip, R.K.H, Chan, D.,

*Cheah, K.S.E.

Mechanisitic insights into

skeletal development gained

from genetic disorders. Current

topics in Developmental

Biology

N/A Yes Yes

1176 2019 Tsang KY, *Cheah, K.S.E.

The extended chondrocyte

lineage: implications for

skeletal homeostasis and disorders.

Current Opinion in Cell Biology

Yes Yes

118 2020 Y. Zhang, Z. Zhang, P.

Chen, C.Y. Ma, C. Li,

T.Y.K. Au, V. Tam, Y. Peng, R. Wu, K.M.C. Cheung, P. C.

Sham, H.F. Tse, D. Chan, V.Y. Leung,

*K.S. E.Cheah, *Q.

Lian.

Directed differentiation of notochordal-like

and nucleus pulposus-like cells

using human pluripotent stem

cells. Cell Reportsin revision.

N/A N/A Yes

Page 56: RESEARCH GRANTS COUNCIL THEME-BASED RESEARCH … · HC-specific removal of both . Irx3. and . Irx5. results in fewer HC-derived osteoblasts and more (in both number and proportion)

The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1197 2019 Au, T.Y., Lam, T.K., Peng, Y,

Wynn, S. Cheung, K.M.,

Cheah K.S., *Leung V.Y..

Transformation of resident notochord-descendent nucleus

pulposus cells in mouse injury-

induced fibrotic intervertebral discs.

Under review by Aging Cell.

N/A N/A Yes N/A

12018 Yes #Chen, L., Peng, S., Zhou, X.,

Long, D., Pan, H., Leung, V. Y., Lu, W. W.,

Wu, N., Song, Y.,

Huang, S., Li, W., Samartzis,

D.

Ipriflavone is safe and effective in postmenopausal

women with osteopenia or

osteoporosis: a systematic review and meta-analysis.

Lancet.

N/A N/A Yes N/A

12119 Yes #Samartzis, D., Karppinen, J.,

Lotz, J. C.

Degenerative disc disease. Lancet;

N/A N/A Yes N/A

1220 Yes #Stokes O., Fung G., Mak

K.C., Luk K.D.K.,

*Samartzis D.

A problematic "dens". Global Spine J; (Under

Review)

N/A N/A Yes N/A

121 Yes Y. Zhang, Z. Zhang, P. Chen, C.Y. Ma, C. Li, T.Y.K. Au, V. Tam, Y. Peng, R. Wu, K.M.C. Cheung, P. C. Sham, H.F. Tse, D. Chan, V.Y. Leung, *K.S. E.Cheah, *Q. Lian.

Directed differentiation of notochordal-like

and nucleus pulposus-like cells

using human pluripotent stem

cells. Cell Reportsin revision.

N/A N/A Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1232 Yes K. S. Lee, M. S. Yip, T.K. Lam,

Y.Q. Song, K.M.C. Cheung K.S.E. Cheah,

&*D. Chan

Asporin induces TGFb signalling and intervertebral disc degeneration

via disruption of the fribrillin matrix. (Target Journal:

Nature Communications)

N/A N/A Yes N/A

1243 Yes Y Zhang, Z Zhang, PK

Chen, S. Richardson, J.A. Hoyland, K.S.E. Cheah and *Q.

Lian

Common and distinct molecular signatures between hESC/iPSCs and

adult tissue-derived NPC-like cells reveal putative

pathways involved in healthy and degenerative

conditions (Target journal: Cell Stem

Cell or Nature Communications)

N/A N/A Yes N/A

1254 Yes CW Cheng, KY Tsang, S Guo, KS Lee, WCW Chan, D Chan, *KSE Cheah.

Single cell analyses of adult nucleus pulposus of the

intervertebral disc reveal heterogeneity

and slow-cycling cells with

stem/progenitor properties. (Target journal: Cell Stem

Cell/Nature Communications.)

N/A N/A Yes

1264 Yes C. Zhang, F Lim, S.M.

Richardson, W.K. Tam, T.Y. Au, D. Chan,

R.S. Tuan, J.A. Hoyland, K.S.E.

Cheah, K.M. Cheung, and *V.Y. Leung.

N-cadherin modulates

mechanosensensingand notochordal cell fate. (Target journal:

PNAS/ PLoS Biology)

N/A N/A Yes

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1275 Yes CW Cheng, KY Tsang, S Guo, KS Lee, WCW Chan, D Chan,

*KSE Cheah.K.Y.

Tsang, H. S.W. Tsang. R.K.H.

Yip, J. Gu X. Li, Y. Yang, D. Chan, MQ

Zhang, *K.S.E. Cheah

Single cell analyses of adult nucleus pulposus of the

intervertebral disc reveal heterogeneity

and slow-cycling cells with

stem/progenitor properties. (Target journal: Cell Stem

Cell/Nature Communications.)Transition states and

Wnt control of lineage trajectories in chondrocyte to osteoblast trans-differentiation. (Target journal:

Nature Cell Biology /Developmental Cell, Cell Stem

Cell)

N/A N/A Yes N/A

1286 Yes S. Guo, T.Y. Au, S.L. Wynn,

K.K.H. Leung, A. Aszodi, R.

Fassler, D. Chan, *K.S.E.

Cheah

β1 integrin regulates

convergent extension in mouse notogenesis. (Target

journal: Development).

N/A N/A Yes N/A

1297 Yes T.Y. Au, R.K.H. Yip, S. Wynn,

I.Y.Y.Szeto, T.Y. Tan, Y.H. Geng, K.M.C. Cheung, K.D.K. Luk, D. Chan, R. Lovell-Badge, *K.S.E

Cheah.

Sox9Y440X mutation causes campomelia by dysregulation of osteogenesis and

hedgehog signaling. (Target journal:

PNAS)

N/A N/A Yes N/A

13028 Yes T.Y. Au, B.Niu, R.M.H. Wu,

Y.Qin, K. T.T. Ng, K.K. Tong,

J. Wang, D. Chan, P.C.

Sham, M.Q. Zhang, R.Ng, *K.S.E Cheah.

Systems biology assisted lineage

directed differentiation of notochordal cells.

(Target journal: Cell Stem Cell/Cell Reports/PLoS

Biology/ELife).

N/A N/A Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

13129 Yes I.Y.Y. Szeto, R.M.H.Wu, B

Niu, A.S.L. Wong., *K.S.E.

Cheah.

MicroRNA-mRNA regulator networks

promote notochordal cell fate in

directing differentiation of embryonic stem

cells. (Target journal: Cell Stem

Cell/Cell Reports/PLoS

Biology/ELife).

N/A N/A Yes N/A

1320 Yes S. Guo, P.K. Chen, T. Au, B. Niu, Z. Tan K.Y. Tsang, R. Wu,

S.M. Richardson, J.A.

Hoyland, D. Samartzis, J.

Cheung, K.D.K. Luk, K.M.C. Cheung, D. Chan, M.Q.

Zhang, R.Ng, P.C. Sham,

*K.S.E Cheah.

Molecular signatures of single

cell in human intervertebral discs

reveal heterogeneity, senescence and

decline of notochordal-like

cells in intervertebral disc

degeneration (Target journal:

Journal of Clinical Investigation)

N/A N/A Yes N/A

1331 Yes P. Kao, M. S. Yip Y. Li, K. L. Sze, A. Fosang, D. McCulloch,

K.M.C. Cheung, K.D.K. Luk, J. Karppinen, K. Cheah, P. C.

Sham, Y. Song and *D. Chan

Association and functional analysis

of ADAMTS5 in lumbar disc

degeneration. (Target journal: The

Spine Journal).

N/A N/A Yes N/A

1342 Yes Y. Li, D. Samartzis,

K.M.C. Cheung, K.D.K. Luk, J. Karppinen, Y.

Song, D. Chan, K.S.E. Cheah,

and *P.C.Sham.

Novel genetic risk factors identified from a genome-wide association study for lumbar

disc degeneration in Southern Chinese.

(Target journal: European Journal

of Human Genetics)

N/A N/A Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1353 Yes Y. Li, D. Samartzis,

K.M.C. Cheung, K.D.K. Luk, J. Karppinen, Y.

Song, K. Cheah, D. Chan and *P.

C. Sham

Plasma metabolites as mediators of

genetic factors for weight, height and intervertebral disc

degeneration. (Target journal:

American Journal of Human Genetics)

N/A N/A Yes N/A

1364 Yes P.K. Chen, S.Guo, Y. Li, T. Au, Z. Tan, B. Niu, R.Wu, D. Samartzis, J. Cheung, K.

M.C. Cheung, K.D.K. Luk, J. Karppinen, Y.

Song, D. Chan, R. Ng, P. C.

Sham and *K. Cheah

Integrative systems approach implicate

cellular stress pathways leading to

calcification in intervertebral disc

degeneration. (Target journal:

Nature Medicine)

N/A N/A Yes N/A

1375 Yes Y. Qin, P.K. Chen, Y. Li, J.

Wang, P. C. Sham, K.

Cheah, *R. Ng

Active enhancer-transcription factor interactions in the

development of the nucleus pulposis in

mouse. (Target journal: Genome

Biology)

N/A N/A Yes N/A

1386 Yes Y. Qin, J. Wang, K. Cheah and *P. C Sham

Modelling transcriptional regulation via sparse group

LASSO. (Target journal:

Bioinformatics).

N/A N/A Yes N/A

1397 Yes Z J. Tan, B. Niu, C.Wang K. Y. Tsang, M.Q.

Zhang, D. Chan and

*K.S.E.Cheah

The RNAome of the ER stressed growth plate identify novel UPR target genes.

(Target journal: Journal of Cell Biology, PLoS

Genetics).

N/A N/A Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

14038 Yes C.Wang, Z J. Tan, W.C.W. Chan, A.S. Shah, K. Y.

Tsang, D. Chan and *K.S.E.

Cheah.

Selective Inhibition of the Integrated Stress Response

Ameliorates premature

intervertebral disc degeneration

(Target Journal: J. Clinical

Investigation or Science

Translational Medicine).

N/A N/A Yes N/A

14139 Yes #Samartzis D, Karppinen J,

Cheah K, Chan D, Cheung, JPY,

Luk KDK, Cheung

KMC, Sham P.*

10 year longitudinal follow-up study of

lumbar disc degeneration.

(Target Journal: Arthritis and Rheumatism)

N/A N/A Yes N/A

1420 Yes #Samartzis D, Karppinen J,

Cheah K, Chan D, Cheung, JPY,

Luk KDK, Cheung

KMC, Sham P*

10 year longitudinal study of lumbar

MRI phenotypes. (Target Journal:

Arthritis and Rheumatism)

N/A N/A Yes N/A

1431 Yes #Samartzis D, Karppinen J,

Bow C, Cheah K, Chan D,

Cheung, JPY, Luk KDK,

Sham P, Cheung KMC*.

Natural history and risk factors of low

back pain and sciatica: a 10 year longitudinal study(Target Journal: J Bone and Joint

Surgery)

N/A N/A Yes N/A

1442 Yes Cheung, P., Tam, V., Leung, V. Y., Samartzis, D., Cheung, K. M. C., Luk, K. D. K., *Cheung, J. P.-Y.

The relationship of ligamentum flavum

changes and developmental lumbar spinal

stenosis. Scoliosis and Spinal Disorder.

N/A N/A Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1453 Yes C.C.Y Chan., M.Y Choi., Luk K.D.K, D Chan,

J.A Tanner, *K.S.E Cheah.

Redundant function and dose dependent

requirement for Sedlin and

Sedlin-like protein in development. Target journal J.

Cell Biology

N/A N/A Yes N/A

1464 Yes M. Kudelko, R. Sharma, Y.

Zhang, R. Ramalingam,

W. C.W. Chan, T. Y.K. Au, B. Niu, V. Tam, Y. W. Lam,

K.S.E. Cheah and *D. Chan

Label-Free Proteomic

Comparison of Murine

Intervertebral Disc Across Gender,

Level and Structures. (Target

Journal: Matrix Biology.)

N/A N/A Yes N/A

1475 Yes #V Tam, P Chen, M

Kudelko, W Chan, A Guo, L

Haglund, K Cheah KSE Cheah, *D

Chan.

Proteomic architecture of

young and aged human lumbar

intervertebral discs. (Target journal

eLife) A proteomic

landscape of the human lumbar

intervertebral disc

(Target journal: eLife)

N/A N/A Yes N/A

1486 Yes Li HY, Chooi WH, Huang N, Li YY, Chan D, Cheah K, Chan

BP*

Collagen-based 3D culture systems for

bovine nucleus pulposus cells

(bNPCs). (Target journal: Scientific

Reports)

N/A N/A Yes N/A

1497 Yes Yuan MT, Yeung CC, Au TYK, Chan D, Cheah KSE, *Chan BP.

Development of Three-Dimensional

System for Culturing

Notochordal Cells. (Target journal: Biomaterials)

N/A N/A Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

15048 Yes M. Kudelko, R. Sharma, Y.

Zhang, W.CW Chan, T. Y. Au, B.Niu, H.Kong, R.Ramalingam, V. Tam, Y. W.

Lam, K.S.E. Cheah and *D.

Chan

Comparative Proteomics of Heathy Murine

Intervertebral Discs: Gender, Level and Structure. Target Journal: Matrix

Biology

N/A N/A Yes N/A

15149 Yes #V. Tam, P.K. Chen, A.Yee,

M. Kudelko,W. C.W Chan,

K.SE Cheah, L. Haglund and Danny Chan

A Proteomic Architectural Landscape of

Healthy and Aging Human

Intervertebral Discs. Target Journal:

eLife

N/A N/A Yes N/A

1520 Yes K.S. Lee, M.S. Yip, T.K. Lam, M. Kudelko, Y.

Zhang, Y.L.Wong,

K.SE Cheah, Y. Q. Song, and

*D. Chan

Over expression of Asporin in the

mouse intervertebral disc

induces chondrogenic and fibrotic events via activation of TGFb signaling. Target Journal: Human

Mol. Genet.

N/A N/A Yes N/A

1531 Yes #W.CW Chan, A. M. Shah,

D.Vimalagopalan, Y. Zhang, A.

Nieto, K.SE Cheah and

*Danny Chan

Transition of endplate

hypertrophic chondrocytes to annulus fibrosus

cells via epithelial to mesenchymal

transition for intervertebral disc

homeostasis. Target Journal:

undecided

N/A N/A Yes N/A

1542 Yes T.Y. Au, R.M.H. Wu, P.K. Chen,

B.Niu, D. Chan, P.C. Sham,

M.Q. Zhang, *K.S.E Cheah.

Developmental guided lineage

directed differentiation of

mouse notochordal and nucleus

pulposus cells. (Target journal: Cell

Stem Cell/Cell Reports/PLoS

Biology/eLife).

N/A N/A Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1553 Yes #S.,Guo, P.K.Chen, TYK

Au., V.Tam, B.Niu, K.Y. Tsang, S.M.

Richardson, J.A Hoyland., D.

Sakai, D. Samartzis, J.

Cheung, K.D.K. Luk, K.M.C

Cheung, M.Q. Zhang, Chan

D., Sham P.C., *Cheah K.S.E

MassiveDramatic progressive change in cell identities in

human intervertebral disc

degeneration (Target journal:

Nature Medicine)

N/A N/A Yes N/A

1564 Yes #S. Guo, P.K. Chen, T. Au, R.

Wu, V. Tam, S.M.

Richardson, J.A. Hoyland, J. D.

Sakai, J. Cheung, K.M.C.

Cheung, D. Chan, M.Q.

Zhang, *K.S.E Cheah

HOPX maintains notochordal-like progenitor cell

identity of human nucleus pulposus

cells. Target journal Nature Medicine SM/J maintains notochordal-like progenitor cell

identity of human nucleus pulposus

cells

N/A N/A Yes N/A

1575 Yes #K.Y. Tsang, X. Li, T.L. Chu,

M. P. Kong, H. S.W. Tsang, J.

Gu, Y. Yang, D. Chan, M.Q.

Zhang, *K.S.E. Cheah

Transition states and beta catenin

control of lineage trajectories in chondrocyte to

osteoblast trans-differentiation. (Target journal

eLife/Developmental Cell).

N/A N/A Yes N/A

1586 Yes T. L. Chu, K.Y.Tsang, M.

P. Kong, D. Chan, Z. Zhou, *K.S.E. Cheah

MMP14 cleaves PTH1R, regulating the contribution of the chondrocyte-osteoblast lineage

continuum to bone. Target journal

Nature Cell Biology/J Clinical

Investigation

N/A N/A Yes N/A

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The Latest Status of Publications Author(s) (denote the

corresponding author with an

asterisk*)

Title and journal/book (with the volume, pages

and other necessary publishing details

specified)

Submitted to the RGC

(indicate the year ending of

the relevant progress report)

Attached to this report (Yes or

No)

Acknow- ledged the support of

RGC (Yes or

No)

Accessible from the

institutional repository (Yes or No)

Year of publication

Year of acceptance (for paper accepted

but not yet published)

Under review

Under preparat

ion (optiona

l)

1597 Yes #Z. Tan, M. Kong, S. Wen, K.Y. Tsang, B. Niu, D. Chan,

C.C. Hui, *K.S.E. Cheah.

IRX3 and IRX5 inhibit adipogenic differentiation of

hypertrophic chondrocytes and

promote osteogenesis. Target

journal J Clinical Investigation.

N/A N/A Yes N/A

160 Yes Li Y, Chen G, Qin Y, Chan

PK, Samartzis, Cheung KMC, Chan D, Cheah KSE, Sham PC.

Genomic and metabolomic

analyses identify very low density lipoproteins as

potential risk factor for lumbar modic

changes.

N/A N/A Yes N/A

161 Yes Liu Z, Qin Y, Wu T,Mak

TSH, Zhang Y, Li MX, Sham

PC.

Reciprocal causation mixture

model for mendelian

randomization analysis.

N/A N/A Yes N/A

162 Yes Li Y, Chen G, Qin Y, Chan

PK, Samartzis, Cheung KMC, Chan D, Cheah KSE, Sham PC.

Correlated degenerative

processes affecting components of

lumbar intervertebral discs

– a longitudinalstudy using nuclear magnetic imaging.

N/A N/A Yes N/A

163 Yes Li Y, Kao P, Zhou X, Cheung

KMC, Luk KDK,

Karppinen J, Song YQ,

Cheak KSE, Chan D, Sham

PC.

Integrin signalling implicated by genome-wide

association study of lumbar disc degeneration in

Southern Chinese.

N/A N/A Yes N/A

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6.4 (b) Recognised international conference(s) in which paper(s) related to

this project was/were delivered: (Please attach a copy of each conference abstract) *Please note that Gordon Research

Conferences have policy that all presentations are priviledged and no abstracts are

published.

Month/

Year/

Place

Title Conference name Submitted

to the

RGC

(indicate

the year

ending

of the

relevant

progress

report)

Attached

to this

report

(Yes or

No)

Acknowledged

the support of

the RGC

(Yes or No)

Accessible

from the

institutional

repository

(Yes or No)

1 March 2019, Houston, USA

Label-Free Proteomic Comparison of Murine Intervertebral Disc Across Gender, Level and Structure

Gordon Conference , Cartilage Biology and Pathology

No No Yes Yes

2 Sept 2019, Stockholm, Sweden

Role of Pax1 in the homeostasis of the spine and pathogenesis of Adolescent Idiopathic Scoliosis

International Consortium for Spinal Genetics, Development and Disease

No Yes Yes No

3 Sept 2019, Sydney, Australia

The proteomic landscape of the young and aged lumbar intervertebral disc

2nd Sydney Spinal Symposium

No no Yes No

4 Nov 2019, Pennsylvania, USA

The proteomic landscape of the young and aged lumbar intervertebral disc

ORS PSRS 5th International Spine Research Symposium

No no Yes No

5 2019 Insights into the cellular basis of intervertebral disc disease gained from the transcriptomes of single cells.

Gordon Research Conference on Cartilage Biology and Pathology.

No no Yes No

6 Feb 15, 2019. Korea

Insights into the cellular basis of intervertebral disc disease gained from the transcriptomes of single cells

2019 Annual meeting of Korean Society for Cartilage and Osteoarthritis.

No Yes Yes No

7 2019 Ultrafast label-free imaging cytometry enables massive and in-depth single-cell

CYTO conference 2019. No Yes Yes No

Appendix II

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biophysical phenotyping,

8 2019 MAP kinase interference promotes the nucleus pulposus progenitor-like differentiation of mesenchymal stem cells.

International Consortium for Spinal Genetics, Development and Disease, Stockholm, Sweden

No Yes Yes No

9 2019 Kyoto, Japan

Promoting Nucleus Pulposus Progenitors-like Differentiation From Mesenchymal Stem Cells Via MAP Kinase Interference Coupled Chondrogenic Induction.

The Annual Meeting of the International Society for the Study of the Lumbar Spine,

No Yes Yes No

10 June 2019 Santiago, Chile

Pathway for becoming a spine deformity surgeon Assessment of sagittal balance to prevent complications Neurological deterioration, prevention and management My guidelines for reduction Complications in adult deformity – lessons from Scolirisk study. 20 years’ experience in degenerative disc disease research: What have I learnt?

AOSpine Regional Course

No Yes Yes No

11 Sept 2018 Cambridge,

Mini-Spine: an Ex-vivo Mouse Model

Engineering Multicellular Self-

No Yes Yes No

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United Kingdom

System for Functional Studies on the Notochord and Nucleus Pulposus

Organisation III

12 March 2018 in Hinxton

An integrative bioinformatics approach for establishing transcriptomic identities of single-cell populations

Wellcome meeting No Yes Yes No

13 April 2018 Hong Kong

20 years’ experience in degenerative disc didease: What have we learnt

The 15th HK Int’l Orthopaedic Forum

No Yes Yes No

14 June 2018 Taipei, Taiwan

Future direction of spinal care: Genetics, Disc regeneration and Artificial intelligence

Asia Pacific Spine Society annual meeting

No Yes Yes No

15 May 2018 St. Petersburg, Russia

Modern surgery for spinal deformities in skeletal dysplasia and syndromal scoliosis Degenerative disc disease – challenging traditional reliefs Scoliosis Research Society (SRS) past, present and future

Scoliosis Research Society Worldwide Course wit the IX Congress of the Russian Association of Spinal Surgeons

No Yes Yes No

16 April 2018 Istanbul Turkey

Form lab to bench-side: Thinking outside the box

Acibadem Mehmet Ali Aydinlar University

No Yes Yes No

17 April 2018 Antalya, Turkey

Decision making in degenerative deformity High grade slip: to reduce or not?

20th Asia Pacific Orthopaedic Association Congress

No Yes Yes No

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Thinking outside the box in spine deformity care

18 April 24, 2018, Instituto de Neurociencias CSIC-UMH, Spain

Chondrocyte plasticity in development & disease

Mini-Symposium “Cell plasticity in development and disease”

No Yes Yes No

19 January 28, 2018, Galveston, TX, USA.

Molecular control of the trans-differentiation of hypertrophic chondrocyte to osteoblast in skeletal development and growth

2018 Gordon Conference on Bones and Teeth

No Yes Yes No

20 Sep 22-27, 2018. Sydney, Australia,

The integrated stress response in skeletal development and disease

International Society of Differentiation Meeting ComBio 2018

No Yes Yes No

21 2018 Hong Kong

Single cell analyses of human intervertebral discs implicate HOPX as a regulator of homeostasis

SBMS Research Day, School of Biomedical Sciences, The University of Hong Kong. 2018.

No Yes Yes No

22 2018 New Orleans, USA

Myofibroblast differentiation in disc degeneration: a possible contribution of local and non-local cells.

64th Annual Meeting of Orthopaedic Research Society

No Yes Yes No

23 2018 Davos, Switzerland

Deriving Nucleus Pulposus-like Progenitors from MAP kinase Interference Coupled Chondrogenic Induction in Mesenchymal stem cells.

eCM XVIII Cartilage & Disc: Repair and Regeneration

No Yes Yes No

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24 2017 Lucca

Development of Intervertebral disc degeneration in N-cadherin mutant mouse.

Gordon Research Conference: Cartilage Biology & Pathology

No Yes Yes No

25 2017 Philadelphia, USA

Myofibroblast differentiation in disc degeneration: a possible contribution of local and non-local cells.

ORS 4th International Spine Research Symposium

No Yes Yes No

26 2017 Athens

Development of lumbar disc degeneration in cadherin 2 mouse mutant.

The Annual Meeting of the International Society for the Study of the Lumbar Spine, Athens.

No Yes Yes No

27 2017 Philadelphia, USA.

Myofibroblast differentiation in disc degeneration: a possible contribution of local and non-local cells

ORS 4th International Spine Research Symposium

No Yes Yes No

28 2017 Hong Kong

Genome-wide identification of active enhancers in the developing mouse nucleus pulposus,

2017 Hong Kong Inter-University Postgraduate Symposium in Biochemical Sciences.

No Yes Yes No

29 2017 Hong Kong

FGF21 Up-Regulates Glycolytic Proteins for Hypertrophic Chondrocyte Survival under ER Stress

2017 Hong Kong Inter-University Postgraduate Symposium in Biochemical Sciences.

No Yes Yes No

30 May 26-30, 2017, Stockholm.

Single cell transcriptomes reveal a mesenchymal state during chondrocyte to osteoblast transition.

Keystone Symposium Single Cell Omics

No Yes Yes No

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31 2017 Lucca. Development of Intervertebral disc degeneration in N-cadherin mutant mouse

Gordon Research Conference: Cartilage Biology & Pathology

No Yes Yes No

32 2017 Athens Development of lumbar disc degeneration in cadherin 2 mouse mutant

The Annual Meeting of the International Society for the Study of the Lumbar Spine

No Yes Yes No

33 2017 Developing Strategies to Produce Notochord Like Cells from Human ESC/iPSC

International Society for Stem Cell Research 2017 Annual Meeting.

No Yes Yes No

34 2017 MMP14 and Regulation of the Hypertrophic Chondrocyte to Osteoblast Lineage

2017 Hong Kong Inter-University Postgraduate Symposium in Biochemical Sciences.

No Yes Yes No

35 April 2-7, 2017, Lucca (Barga), Italy

Chondrocyte Plasticity and Fate Determination in Development and Disease

Gordon Research Conference on Cartilage Biology & pathology. Gordon Research Conference on Cartilage Biology & Pathology.

No Yes Yes No

36 June 2017, Singapore

Mechanisms of chondrocyte adaptation and survival under ER stress

18th International Congress of Developmental Biology

No Yes Yes No

37 Nov 2017 Hong Kong

Aetiology of intervertebral disc degeneration: implications on motion preservation and regeneration

The HK Orthopaedic Association Annual

No Yes Yes No

38 Nov 2017 San Diego USA

Thinking outside the box on a global scale

11th Int’l Congress on Early Onset Scoliosis

No Yes Yes No

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39 Dec 2017 Yamagatoa, Japan

Management of degenerative spinal deformities

第 20 回山形脊椎

懇話

No Yes Yes No

40 May 29-June 2, 2017 Athens, Greece.

Structural vertebral endplate nomenclature and etiology: a study by the ISSLS Spine Phenotype Focus Group.

44th Annual Meeting of the International Society for the Study of the Lumbar Spine.

No Yes Yes No

41 May 29-June 2, 2017 Athens, Greece.

Lumbar high‐

intensity zones on MRI: imaging biomarkers for severe, prolonged low back pain and sciatica in a

population‐based

cohort.

44th Annual Meeting of the International Society for the Study of the Lumbar Spine.

No Yes Yes No

42 May 29-June 2, 2017 Athens, Greece.

Radiographic indices for lumbar developmental spinal stenosis.

44th Annual Meeting of the International Society for the Study of the Lumbar Spine.

No Yes Yes No

43 May 29-June 2, 2017 Athens, Greece.

Coexisting cervical and lumbar disc degeneration and associated MRI phenotypes: a

large‐scale

population‐based

study.

44th Annual Meeting of the International Society for the Study of the Lumbar Spine.

No Yes Yes No

44 July 2017 Hong Kong

Genome-wide Identification of Active Enhancers in the Developing Mouse Nucleus Pulposus

Gordon Research Conference on Genome Architecture in Cell Fate & Disease

No Yes Yes No

45 June 2017, The Chinese University of Hong Kong, Hong Kong

Regulation of cell fate decision by microRNA in the mesendoderm lineage

Gordon Research Conference: Germinal Stem Cells

No Yes Yes No

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46 July 2017, The Hong Kong University of Science and Technology, Hong Kong

Regulation of cell fate decision by microRNA in the notochordal lineage

Gordon Research Conference: Genome Architecture in Cell Fate and Disease

No Yes Yes No

47 April, 2017 Lucca, Italy

Mechanistic Insights into ER Stress Induced Skeletal Defects Identify Therapeutic Opportunities (Oral and poster presentation)

Gordon Research Seminar: Comprehending Cartilage Formation, Function and Failure for Improving Joint Health

No Yes Yes No

48 April, 2017 Lucca, Italy

Mechanistic Insights into ER Stress Induced Skeletal Defects Identify Therapeutic Opportunities

Gordon Research Conference: Understanding Biology to Achieve Better Cartilage Health

No Yes Yes No

49 May, 2017 Athens, Greece

Lumbar paravertebral muscle fatty infiltration: Relationship of distribution patterns to demographics, disability and pain

44th Annual Meeting of the International Society for the Study of the Lumbar Spine

No Yes Yes No

50 May, 2017 Athens, Greece

Lumbar high-intensity zones on MRI: imaging biomarkers for severe, prolonged low back pain and sciatica in a population- based cohort

44th Annual Meeting of the International Society for the Study of the Lumbar Spine

No Yes Yes No

51 May, 2017 Athens, Greece

Coexisting cervical and lumbar disc degeneration and associated MRI phenotypes:

44th Annual Meeting of the International Society for the Study of the Lumbar Spine

No Yes Yes No

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a large-scale population- based study

52 May, 2017 Athens, Greece

Multi-dimensional assessment of vertebral endplate breaks on MRI: implications in spine degeneration and pain/disability

44th Annual Meeting of the International Society for the Study of the Lumbar Spine

No Yes Yes No

53 May, 2017 Athens, Greece

Vertebral Endplate Abnormalities Highly Associated with Thoracic Disc Herniations in Symptomatic Patients

44th Annual Meeting of the International Society for the Study of the Lumbar Spine

No Yes Yes No

54 April, 2017 Lucca, Italy

Differential roles of Hif-1α and Hif-2α in biosynthesis of chondrocyte specific extracellular matrix

Gordon Research Conference: Understanding Biology to Achieve Better Cartilage Health

No Yes Yes No

55 April, 2017 Australia

Development of lumbar disc degeneration in cadherin 2 mouse mutant

ISSLS Annual Meeting

No Yes Yes No

56 May 2017, Stockholm

Single cell transcriptomes reveal a mesenchymal state during chondrocyte to osteoblast transition.

Keystone Symposium Single Cell Omics

No Yes Yes No

57 June 2017, Boston, USA

Developing Strategies to Produce Notochord Like Cells from Human ESC/iPSC

ISSCR 2017 Annual Meeting

No Yes Yes No

58 July, 2017 University of

MMP14 regulates Lineage Progression

Gordon Research Conference:Matrix Metalloproteinases

No Yes Yes No

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New England USA

of Hypertrophic Chondrocytes to osteoblasts

59 April, 2017 Lucca, Italy

Synergistic co-regulation and competition underlies a SOX9-GLI- FOXA phasic transcriptional network that coordinates growth plate chondrocyte differentiation (Best poster presentation prize)

Gordon Research Seminar: Comprehending Cartilage Formation, Function and Failure for Improving Joint Health

No Yes Yes No

60 April, 2017 Lucca, Italy

Synergistic co-regulation and competition underlies a SOX9-GLI- FOXA phasic transcriptional network that coordinates growth plate chondrocyte differentiation (Best poster presentation prize)

Gordon Research Conference: Understanding Biology to Achieve Better Cartilage Health

No Yes Yes No

61 April, 2017 Lucca, Italy

Proteomic Landscape of murine Intervertebral disc reveals mechanisms involved in homeostasis and disc structure maintenance (Oral and poster presentation)

Gordon Research Seminar: Comprehending Cartilage Formation, Function and Failure for Improving Joint Health

No Yes Yes No

62 April, 2017 Lucca, Italy

Proteomic Landscape of murine Intervertebral disc

Gordon Research Conference: Understanding

No Yes Yes No

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reveals mechanisms involved in homeostasis and disc structure maintenance

Biology to Achieve Better Cartilage Health

63 December, 2016, The University of Hong Kong

MMP14 regulates Lineage Progression of Hypertrophic Chondrocytes (Best oral presentation prize) (Champion)

21th Rsearch Postgraduate Symposium,

No Yes Yes No

64 September, 2016, Taipei, Taiwan

Reconstitution of nucleus pulposus cell matrix niche in 3D collagen microspheres

Tissue Engineering and Regenerative Medicine International Society- Asia Pacific Meeting

No Yes Yes No

65 13-16 Apr 2016, Dubai

Collagen Microspheres—A Three-Dimensional Culture System for Notochordal Cells.

World Forum for Spine Research, WST004.

No Yes Yes No

66 13-16 Apr 2016, Dubai

Compression Loading Induced Cellular Stress Response of Intervertebral Disc Cells in Organ Culture.

World Forum for Spine Research, WST009.

No Yes Yes No

67 13-16 Apr 2016, Dubai

Chooi WH, Chan BP. Compression Induced Stress Response of Nucleus Pulposus Cells in 3D Collagen Gel.

World Forum for Spine Research, WST005.

No Yes Yes No

68 October 2016 Suzhou, China

Genome-wide Identification of Active Enhancers in the Developing Mouse Nucleus Pulposus

Systems Biology of Gene Regulation and Genome Editing

No Yes Yes No

69 December 2016

Chondrocyte plasticity,

The 9th Guangzhou

No Yes Yes No

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Guangzhou, China

adaptation and survival under ER stress

International Conference on Stem Cell and Regenerative Medicine

70 2016 Orlando, USA

Cadherin2/N-cadherin Deficiency In Nucleus Pulposus Causes Loss Of Cell Vacuolation And Disc Integrity.

62nd Annual Meeting of Orthopaedic Research Society

No Yes Yes No

71 December 20- 21, 2016, Guangzhou, PR China.

Chondrocyte plasticity, adaptation and survival under ER stress.

9th International Conference on Stem Cell and Regenerative Medicine

No Yes Yes No

72 2015 Philadelphia, USA

Nucleus Pulposus Cell Vacuolation: A New Perspective From N-Cadherin/Cadherin 2 Function.

ORS 3rd International Spine Research Symposium,

No Yes Yes No

73 2014 Xian, China

Cadherin 2 is required for intervertebral disc homeostasis and maintenance of vacuolated phenotype in nucleus pulposus cells.

World Forum for Spine Research,

No Yes Yes No

74 December 2016 Guangzhou, China

Chondrocyte plasticity, adaptation and survival under ER stress

The 9th Guangzhou International Conference on Stem Cell and Regenerative Medicine

No Yes Yes No