q Þ ½ '¼ w 2e »84 .4 b(f Æ è >* í 5 2 b6ä$Π· x 8 zlamp 2 > | gnasba 2 _ | (f...

12
ձᒓ➼᭷ᐖ㉥₻㠴ẟ⸴⡆ฟ㸪ᐃᐃ㔞ἲ㛤Ⓨ Ỉ⏘⥲◊✲℩ᡞෆᾏ༊Ỉ⏘◊✲ᡤ ᆏᮏ⠇Ꮚ㸪እ⿱㸪ᒣᓠ⏕ 㸯 యィ⏬ 1┠ⓗ ㏆ᖺ㸪℩ᡞෆᾏ㇏ᚋỈ㐨᭷ᐖ㉥₻ࢺࢡ Karenia mikimotoi ⁺ᴗ ⿕ᐖⓎ⏕Karenia ᙧែ㢮ఝ ࡓࡋ13 ࡀ✀ᙧែศ㢮 ⤒ࡣ㦂▱㆑ᚲせ㉥₻ࢱࢽ㸪᪩ᮇ㸪ṇ☜᭷ᐖ✀ Ⓨ⏕ฟ㸪ᐃ㸪㉥₻ཎᅉ✀ᛂࡓࡌᑐ⟇⁺ᴗ⿕ᐖ㜵Ṇ㍍ῶ ࡞ࡘࡇࡑࠋ㸪ᮏㄢ㢟Karenia ᒓ➼᭷ᐖ㉥₻ࢺࢡ⡆ฟ㸪ᐃᡭἲ㛤Ⓨ⾜ࠋ࠺≉㸪⣽⬊ᙧែࡃࡁᅔ㞴↓࡞Ẇ 㠴ẟ⸴➼ᑐ㇟LAMP ἲ➼ศᏊ⏕≀Ꮫⓗᡭἲ⡆ฟ㸪ᐃἲ❧☜ࡢ┠ᣦࠋࡍLAMP ᐃᛶⓗฟἲࡀࡓࡁ㸪᭷ᐖ㉥₻ࢱࢽᐃ㔞ⓗ㔜せLAMP ᢏ⾡ᨵⰋ⾜㸪ἲ⏝ࡓ࠸ᐃ㔞ฟ┠ᣦࡉࠋࡍ 㸪⌧ሙᢏ⾡ᑟධᅗ㸪ศᯒసᡂศᯒᶆ‽ရస〇㸪㓄ᕸ᪉ἲウ⾜ ࠋ࠺㸪᭷ᐖ㉥₻⸴࡞ࡓฟᡭἲ RNA NASBA ἲ➼ ฟᡭἲ㛤Ⓨ㸪άᛶ࠶ࡀ⣽⬊ฟᡭἲウ2ヨ㦂➼᪉ἲ ᖹᡂ 26 5 ᭶㮵ඣᓥ┴⏋ᓥ࠸࠾ ictyocha ᒓ⸴㢮㣴Ṫ⁺ᴗ⿕ᐖ ࠋࡓࡋ⏕ictyocha ᒓ⸴㢮⏕ࡣά⎔୰㦵᱁ᣢᮇᣢ࠸࡞ࡓ࠶ࡀ㸪๓⪅㦵᱁ᙧែ✀㸪ᚋ⪅ᙧែᇶ✀ᅔ㞴 ࡢࡇ࡞࠺≧ἣ ictyocha ᒓ⸴㢮ᙧែศ㢮ศᏊ⣔⤫ศ㢮㛵ಀ༑ศ ࡇࡑࠋ࠸࡞࠸㸪ᮏᖺᗘ᪥ᮏἢᓊฟ⌧ ichtyocha ᒓ⸴㢮࠸ࡘᙧែ ศᏊ⣔⤫ᢕᥱ㸪ᇵ㣴ᰴ❧☜ࡀฟ᮶⏋ᓥ⁺ᴗ⿕ᐖᘬ✀ࡓࡋࡇ ࠸ࡘ LAMP NASBA ἲ⡆ฟ᪉ἲ㛤Ⓨウ㸪᭷ᐖ㉥₻ᙧ ᡂ✀」✀ Karenia ࠸ࡘ㸪ᘬࡁ⥆ࡁLAMP ἲ⡆ฟᡭἲᚲせୟᇵ㣴ᰴࡋ❧☜ࡀ✀࠸࡞࠸࠸ࡘᇵ㣴ᰴ❧☜ࡢヨ㸪እ㒊ᶵ 㛵➼⥔ᣢᇵ㣴ᰴ㞟ࡉࠋK. mikimotoi ᑐ㇟ ࡓࡋNASBA ἲ᰾ ࢢࢺ⡆ฟᡭἲ㧗ᗘウᖹᡂ 27 ᖺᗘィ⏬ཬ⤖ࡧ1┠ⓗ యィ⏬ ࠋࡌ2ヨ㦂➼᪉ἲ యィ⏬ ࠋࡌ1) LAMP ἲ⡆ฟᡭἲ㛤Ⓨ ձ ictyocha ᒓ⸴㢮ᙧែศᏊ⣔⤫ศ㢮 124

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Page 1: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

1Karenia mikimotoi

Karenia 13

Karenia

LAMP LAMP

LAMP

RNA NASBA

226 5 ictyocha

ictyocha

ictyochaichtyocha

LAMP NASBAKarenia LAMP

K. mikimotoi NASBA

271

2

1) LAMPictyocha

124

Page 2: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

ictyocha26 5 ictyocha octonaria ictyocha

icicitus glo osus 9000 rpm, 5TE 5 Chele PBS DNA DNArDNA ITS1 LSU D1-D2 PCR

GenBank ictyocha . glo osus

26 5 . octonaria LAMP. octonaria Ooc1KSK Primer E plorer

er.3 FUJIITSU Solutions LAMPLAMP

Karenia digitataK. digitata Karlodinium

26 K. digitataGF/F

apata et al. (2000)HPLC

K. digitata LAMPK. digitata LAMP

27 K. digitataTE

5 Chele PBS DNA LAMP2) NASBA

K. mikimotoi NASBAK. mikimotoi 3.69 104 cells mL-1 1.5 mL 10,000 rpm 3 4

-80 RNeasyPlusE tragen 50 L

E tragenNASBA 5 L

5,540 554 55.4 0.55 0.05 0.005 0.0005 cellsK. mikimotoi NASBA

NASBA1.5 mL 65 5 41

NASBA 60 NASBA3 15

NASBA

125

Page 3: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

NASBA RNA 65NASBA 65

NASBA 65 K. mikimotoi

E tragen

3 mK. mikimotoi 23 cells mL-1 1 mL

-80 300 L TEE tragen

1 1 2 1 2 2 33 3 10

L NASBA 11.5 cells1.15 cells 2

NASBANASBA RNA RNA

RNA DNANASBA RNA

DNARNA DNA

RNARNA

DNAK. mikimotoi

NASBA

K. mikimotoi 5.35 104 cells mL-1 2 mL 3,000 rpm 5-80 20 0, 1, 3, 6, 24, 48, 72

-80 E tragen 10 LNASBA

NASBAPCR

K. mikimotoiK. mikimotoi 1.32 104 cells mL-1 0.1 mL 1.5

mL -802015 10 26 3 m 10 L

126

Page 4: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

Chaetoceros spp. keletonema spp.4 25

. octonaria NASBA. octonaria rRNA ITS rRNA LSU D1D2

NASBADNA PCR DNA

31 LAMP

ictyocha1 .

octonaria . i ula . speculum1 ITS1-5.8s-ITS2 ITS

rDNA LSU D1-D2 LSU ITS. i ula . octonaria . speculum

. glo osus NIWA1008 . i ula2

. i ula 2

spine2

. octonaria . speculum. octonaria . speculum GenBank

. octonaria NIWA1026

. octonaria. speculum. speculum

26 5 . octonaria LAMPLSU ITS ITS

6 LAMP . octonaria. speculum ITS

LAMP . octonariaNIWA1026 . speculum GenBank

. octonaria Ooc3mi KSKDNA 220 cells L-1 LAMP

64 62 63 3

127

Page 5: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

0.022 cells L-1 2 cells 100L 4

23.5 22.968.1 62.2 30

70 .octonaria LAMP

. octonaria . speculum

K. digitataKarenia cf. digitata

ventral pore K digitata sulcus tube-shaped structure 5 K. digitata Keto-19 -butanoylo yfuco anthin-like, 4-keto-19 -butanoylo yfuco anthin, Keto-he anoylo yfuco anthin-like,

4-keto-19 -he anoylo yfuco anthin 6 apata et al. (2012)6 Karenia

Karlodinium K. digitata KarlodiniumK. digitata Karlodinium

K. digitata LAMPK. digitata

2 6 7 10 2023 K. digitata

LAMP K. digitata

LAMPK. digitata

2 NASBAK. mikimotoi NASBA

RNeasyPlus E tragen E tragen0.55 cells

7 E tragen 0.05 cells3 E tragen 1

cell E tragen NASBA

NASBANASBA 65 41 41

8 65

128

Page 6: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

0.05 cells55.4 cells

65NASBA

E tragen

NASBA K. mikimotoi

923 cells K. mikimotoi

NASBANASBA

20 K. mikimotoi 72 NASBA10 PCR 24

NASBA

72 NASBA RNA

11 PCR 1NASBA 2 RNA PCR

2 DNA RNA

PCR NASBA2 DNA

NASBA 3K. mikimotoi NASBA

. octonaria NASBA7 DNA ITS rRNA LSU D1-D2PCR 12

RNA NASBA

HPLC

129

Page 7: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

K. digitata

3apata M, Rodriuez F, Garrido JL. Separation of chlorophylls and carotenoids from marine

phytoplankton: a new HPLC method using a reversed phase C8 column and pyridine-containing mobile phases. Mar Ecol Prog Ser 195, 29-45, 2000.

apata M, Fraga S, Rodr guez F, Garrido JL. Pigment based chloroplast types in Dinoflagellates. Mar Ecol Prog Ser 465, 33 52, 2012.

1 ictyocha icicitus glo osus ictyocha glo osa

130

Page 8: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

1. rDNA ITS1-5.8s-ITS2 ictyocha/ n 1000, 50

2 2015 Karenia digitata LAMP

131

Page 9: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

0

10

20

30

40

50

60

70

2.2E+1 2.2E+0 2.2E 1 2.2E 2 2.2E 3

Reactio

ntim

e(m

in.)

Concentration (cells l 1)

w/o Loop w/ Loop

051015202530354045

60 61 62 63 64 65

Reactio

ntim

e(m

in.)

Temperature ( C)

w/o loop w/ loop

3. ictyocha octonariaLAMP

4. ictyocha octonariaLAMP

5. Karenia digitata Kdi01TKTA: apical groove tube-shaped stracture B:C: vesicle

2. ictyocha i ula (a, b) ictyocha octonaria (c, d) a: b: c: d: . i ula

4 spine

132

Page 10: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

6 Karenia digitata Kalrodinium vene icum Karenia mikimotoi

A: K. digitata Kdi03TKT B: K. digitataKdi USK C: K. vene icum B1 D: K. mikimotoi

Km69-9 AX14: Chlorophyll C3, 8: Divinyl Protochlorophyllide a, 9: Chlorophyll C2,

13: Keto-19 -butanoylo yfuco anthin-like, 14: 4-keto-19 -butanoylo yfuco anthin, 16: 19 -butanoylo yfuco anthin, 19: Fuco anthin, 22: Keto-he anoylo yfuco anthin-like, 23: 4-keto-19 -he anoylo yfuco anthin, 26: 19 -he anoylo yfuco anthin, 28: Diadino anthin.

133

Page 11: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

7 NASBA Karenia mikimotoi

8 NASBA 65 Karenia mikimotoi

134

Page 12: q Þ ½ '¼ w 2e »84 .4 b(F Æ è >* í 5 2 b6ä$Π· X 8 ZLAMP 2 > | gNASBA 2 _ | (F Æ è 2 b6ä$Î è0¦ M r S>* w 2e » g B' @0 X' µ r Karenia _ X 8 Z c>* , A)F A>*LAMP 2 _

9 E tragen

1 2 2 22 3 3 3

1 11.5 cells2 1.2 cells

10 NASBA20 Karenia mikimotoi

PCRN

11 NASBA25 Karenia mikimotoi

PCR N

12 ictyocha octonaria NASBA

DNA PCR1: Oct D2 F1, R1, 2:

Oct D2 R1, R2, 3: Oct ITS1 F1, R1, 4: Oct ITS1 F1, Oct ITS2 R1, 5: Oct ITS2 F1, Oct ITS2 R1, 6: F41, R5, 7: F41, R61, 8: Negative control

135