publications citing schott_nexterion_microarray_products_20100929

Publications citing SCHOTT Nexterion® products

yes: free accessRemark: Before 2005 some SCHOTT Nexterion® products were sold using the brand name Quantifoil/QMT (yes): free access for other version than final

(no): no free access via publisher, but elsewhere in the webno: no free access

# AccessAuthor(s) Year Title Journal DOI (http://dx.doi.org/) or URL PMID Open/FreeSlide type Auxiliary materials Keywords

1 Aharonov R, Rosenfeld N, Rosenwald S, Benjamin H2010 Methods for distinguishing between lung squamous carcinoma and other non small cell lung cancers

United States Patent Application 20100047804 US20100047804 yes Nexterion Slide E

2 Alhamdani MS, Schröder C, Hoheisel JD2010 Analysis conditions for proteomic profiling of mammalian tissue and cell extracts with antibody microarrays

Proteomics. 2010; 10(17):3203-3207 10.1002/pmic.201000170 20648482 no Nexterion Slide E analysis conditions; antibody array; cellular protein; protein arrays

3 Alhamdani MS, Schröder C, Werner J, Giese N, Bauer A, Hoheisel JD2010 Single-step procedure for the isolation of proteins at near-native conditions from mammalian tissue for proteomic analysis on antibody microarrays

J Proteome Res. 2010; 9(2):963-971 10.1021/pr900844q 20047340 no Nexterion Slide E antibody microarray; protein extraction; detergents; compartmentalized protein

4 Auchter M, Cramer A, Hüser A, Rückert C, Emer D, Schwarz P, Arndt A, Lange C, Kalinowski J, Wendisch VF, Eikmanns BJ2010 RamA and RamB are global transcriptional regulators in Corynebacterium glutamicum and control genes for enzymes of the central metabolism

J Biotechnol. 2010; in press 10.1016/j.jbiotec.2010.07.001 20620178 no Nexterion Slide E Nexterion Block E Corynebacterium glutamicum; carbon source-dependent transcriptional regulation; RamA; RamB; acetate metabolism; central metabolism; global regulator

5 Barshack I, Lithwick-Yanai G, Afek A, Rosenblatt K, Tabibian-Keissar H, Zepeniuk M, Cohen L, Dan H, Zion O, Strenov Y, Polak-Charcon S, Perelman M2010 MicroRNA expression differentiates between primary lung tumors and metastases to the lung

Pathol Res Pract. 2010; 206(8):578-584 10.1016/j.prp.2010.03.005 20418022 no Nexterion Slide E microRNA; Hsa-miR-182; Hsa-miR-126; lung cancer

6 Barshack I, Meiri E, Rosenwald S, Lebanony D, Bronfeld M, Aviel-Ronen S, Rosenblatt K, Polak-Charcon S, Leizerman I, Ezagouri M, Zepeniuk M, Shabes N, Cohen L, Tabak S, Cohen D, Bentwich Z, Rosenfeld N2010 Differential diagnosis of hepatocellular carcinoma from metastatic tumors in the liver using microRNA expression

Int J Biochem Cell Biol. 2010; 42(8):1355-1362 10.1016/j.biocel.2009.02.021 no Nexterion Slide E miRNA; molecular diagnostics; HCC; pathology

7 Blixt O, Cló E, Nudelman AS, Sørensen KK, Clausen T, Wandall HH, Livingston P, Clausen H, Jensen KJ2010 A high-throughput o-glycopeptide discovery platform for seromic profiling J Proteome Res. 2010; in press 10.1021/pr1005229 20726594 (yes) Nexterion Slide H, Nexterion Slide H MPX-16

glycopeptide; synthesis; chemoenzymatic; enzyme; microarray; glycan array; autoantibodies; post-translationalmodification (PTM)

8 Brinker A, Schulze H, Bachmann T, Möller R2010 Lambda exonuclease pre-treatment for improved DNA-chip performance depends on the relative probe-target position

Biosens Bioelectron. 2010; in press 10.1016/j.bios.2010.07.011 20674326 no Nexterion Slide E lambda exonuclease; probe-target position; DNA-chip; signal enhancement

9 Brunke S, Seider K, Almeida RS, Heyken A, Fleck CB, Brock M, Barz D, Rupp S, Hube B2010 Candida glabrata tryptophan-based pigment production via the Ehrlich pathway Mol Microbiol. 2010; 76(1):25-47 10.1111/j.1365-2958.2010.07052.x 20199593 no Nexterion Slide E

10 Busch J, McBride R, Head SR2010 Production and application of glycan microarrays Methods Mol Biol. 2010; 632:269-282 10.1007/978-1-60761-663-4_17 20217584 no Nexterion Slide H glycan; carbohydrate; lectin; microarray; glycan-binding protein; chip

11 Calduch-Giner JA, Davey G, Saera-Vila A, Houeix B, Talbot A, Prunet P, Cairns MT, Perez-Sanchez J2010 Use of microarray technology to assess the time course of liver stress response after confinement exposure in gilthead sea bream (Sparus aurata L.)

BMC Genomics. 2010; 11(1):193 10.1186/1471-2164-11-193 20307314 yes Nexterion Slide E

12 Cao X, Pettitt ME, Wode F, Sancet MPA, Fu J, Ji J, Callow ME, Callow JA, Rosenhahn A, Grunze M2010 Interaction of zoospores of the green alga Ulva with bioinspired micro- and nanostructured surfaces prepared by polyelectrolyte layer-by-layer self-assembly

Adv Funct Mater. 2010; 20(12):1984-1993 10.1002/adfm.201000242 no Nexterion Glass B (cleanroom cleaned)

biomimetics; hierarchical structures; microstructures; self-assembly; structure-property relationships

13 Castro FO, Sharbati S, Rodríguez-Alvarez LL, Cox JF, Hultschig C, Einspanier R2010 MicroRNA expression profiling of elongated cloned and in vitro-fertilized bovine embryos

Theriogenology. 2010; 73(1):71-85 10.1016/j.theriogenology.2009.08.003 19836069 (no) Nexterion Slide E hand made cloning; miRNA expression; nuclear reprogramming; nucleus transfer; preimplantation bovine embryos

14 Chow E, Gengenbach TR, Wieczorek L, Raguse B2010 Detection of organics in aqueous solution using gold nanoparticles modified with mixed monolayers of 1-hexanethiol and 4-mercaptophenol

Sens Actuators B Chem. 2010; 143(2):704-711 10.1016/j.snb.2009.10.024 no Nexterion Glass B gold nanoparticles; chemiresistor; sensor; self-assembled monolayers; impedance; XPS

15 Christophis C, Grunze M, Rosenhahn A2010 Quantification of the adhesion strength of fibroblast cells on ethylene glycol terminated self-assembled monolayers by a microfluidic shear force assay

Phys Chem Chem Phys. 2010; 12(17):4498-4504 10.1039/b924304f 20407724 no Nexterion Glass B

16 Cló E, Blixt O, Jensen KJ2010 Chemoselective reagents for covalent capture and display of glycans in microarrays

European J Org Chem. 2010; 3:540-554 10.1002/ejoc.200901234 no Nexterion Slide H nanobioscience; glycomics; microarrays; lectins; carbohydrates; chemoselectivity

17 Cooper JS, Raguse B, Chow E, Hubble L, Müller KH, Wieczorek L2010 Gold nanoparticle chemiresistor sensor array that differentiates between hydrocarbon fuels dissolved in artificial seawater

Anal Chem. 2010; 82(9):3788-3795 10.1021/ac1001788 20384365 no Nexterion Glass B

18 Cordeiro AL, Pettit ME, Callow ME, Callow JA, Werner C2010 Controlling the adhesion of the diatom Navicula perminuta using poly(N-isopropylacrylamide-co-N-(1-phenylethyl) acrylamide) films

Biotechnol Lett. 2010; 32(4):489-495 10.1007/s10529-009-0190-3 20035372 no Nexterion Glass B or D adhesion; diatoms; lower criticalsolution temperature (LCST); Navicula perminuta; stimuli; thermo-responsive surfaces

19 Curran T, Coulter WA, Fairley DJ, McManus T, Kidney J, Larkin M, Moore JE, Coyle PV.2010 Development of a novel DNA microarray to detect bacterial pathogens in patients with chronic obstructive pulmonary disease (COPD)

J Microbiol Methods. 2010; 80(3):257-261 10.1016/j.mimet.2010.01.004 20074591 no Nexterion Slide E Nexterion Spot COPD; respiratory bacteria; microarray; real-time PCR

20 Daldoul S, Guillaumie S, Reustle GM, Krczal G, Ghorbel A, Delrot S, Mliki A, Höfer MU2010 Isolation and expression analysis of salt induced genes from contrasting grapevine (Vitis vinifera L.) cultivars

Plant Sci. 2010; in press 10.1016/j.plantsci.2010.07.017 no Nexterion Slide AL grapevine; salt stress; subtractive cDNAlibraries

Bibliography Nexterion products

21 Dardick CD, Callahan AM, Chiozzotto R, Schaffer RJ, Piagnani MC, Scorza R2010 Stone formation in peach fruit exhibits spatial coordination of the lignin and flavonoid pathways and similarity to Arabidopsis dehiscence

BMC Biol. 2010; 8(1):13 10.1186/1741-7007-8-13 20144217 yes Nexterion Slide A+ Nexterion Spot

22 Denapaite D, Brückner R, Nuhn M, Reichmann P, Henrich B, Maurer P, Schähle Y, Selbmann P, Zimmermann W, Wambutt R, Hakenbeck R2010 The genome of Streptococcus mitis B6 - What is a commensal? PLoS One. 2010; 5(2):e9426 10.1371/journal.pone.0009426 20195536 yes Nexterion HiSens E Nexterion Hyb

23 Desimone D, Dlouhy I, Lee WE, Koch D, Horvath J, Boccaccini AR2010 Optically-transparent oxide fibre-reinforced glass matrix composites J Non-Cryst Solids. 2010; in press 10.1016/j.jnoncrysol.2010.05.015 no Nexterion Glass B fracture toughness; glass matrix composites; light transmittance; optomechanical

24 Desouki MM, Liao S, Huang H, Conroy J, Nowak NJ, Shepherd L, Gaile DP, Geradts J2010 Identification of metastasis-associated breast cancer genes using a high-resolution whole genome profiling approach

J Cancer Res Clin Oncol. 2010; in press 10.1007/s00432-010-0937-1 20680643 no Nexterion Slide A+ array CGH; breast cancer; metastasis; suppressor genes; tetraspanins; TSPAN1

25 Dorvel B, Reddy Jr. B, Block I, Mathias P, Clare SE, Cunningham B, Bergstrom DE, Bashir R2010 Vapor-phase deposition of monofunctional alkoxysilanes for sub-nanometer-level biointerfacing on silicon oxide surfaces

Adv Funct Mater. 2010; 20(1):87-95 10.1002/adfm.200901688 yes Nexterion Glass B alkoxysilane; bosensors; deposition; monolayers

26 Dunlop DC, Bonomelli C, Mansab F, Vasiljevic S, Doores KJ, Wormald MR, de Sa Palma A, Feizi T, Harvey DJ, Dwek RA, Crispin M, Scanlan CN2010 Polysaccharide mimicry of the epitope of the broadly neutralising anti-HIV antibody, 2G12, induces enhanced antibody responses to self oligomannose glycans

Glycobiology. 2010; 20(7):812-823 10.1093/glycob/cwq020 20181792 no Nexterion Slide H Human Immunodeficiency Virus; 2G12; oligomannose; yeast; vaccine; GnT Ideficient HEK 293S; kifunensine; glycan array

27 El Khoury G, Laurenceau E, Chevolot Y, Souteyrand E, Cloarec JP2010 A generic surface chemistry for peptide microarrays implementation: Application to the detection of anti-H3 antibody

Biosens Bioelectron. 2010; in press 10.1016/j.bios.2010.07.032 20678917 no Nexterion Glass B surface functionalization; on-chip peptide synthesis; peptide arrays; immunoassay; antibody–antigen interaction; combinatorial peptide synthesis

28 El Khoury G, Laurenceau E, Chevolot Y, Mérieux Y, Desbos A, Fabien N, Rigal D, Souteyrand E, Cloarec JP2010 Development of miniaturized immunoassay: Influence of surface chemistry and comparison with enzyme-linked immunosorbent assay and Western blot

Anal Biochem. 2010; 80(3):257-261 10.1016/j.ab.2010.01.013 20079705 no Nexterion Glass B or D protein microarrays; autoimmune diseases; MAMVE copolymer; surface chemistry; protein immobilization

29 Eldholm V, Gutt B, Johnsborg O, Brückner R, Maurer P, Hakenbeck R, Mascher T, Håvarstein LS2010 The pneumococcal cell envelope stress-sensing system LiaFSR is activated by murein hydrolases and lipid II-interacting antibiotics

J Bacteriol. 2010; 192(7):1761-73 10.1128/JB.01489-09 20118250 no Nexterion Slide E Nexterion Hyb

30 Even S, Leroy S, Charlier C, Zakour NB, Chacornac JP, Lebert I, Jamet E, Desmonts MH, Coton E, Pochet S, Donnio PY, Gautier M, Talon R, Le Loir Y2010 Low occurrence of safety hazards in coagulase negative staphylococci isolated from fermented foodstuffs

Int J Food Microbiol. 2010; 139(1-2):87-95 10.1016/j.ijfoodmicro.2010.02.019 20226555 no Nexterion Slide E CNS, diagnostic microarray; antibiotic; biogenic amine; enterotoxin

31 Fleissner F, Jazbutyte V, Fiedler J, Gupta SK, Yin X, Xu Q, Galuppo P, Kneitz S, Mayr M, Ertl G, Bauersachs J, Thum T2010 Asymmetric dimethylarginine impairs angiogenic progenitor cell function in patients with coronary artery disease through a microRNA-21-dependent mechanism

Circ Res. 2010; 107(1):138-143 10.1161/CIRCRESAHA.110.216770 20489163 (no) Nexterion Slide E angiogenic progenitor cells; endothelial progenitor cells; microRNAs; ADMA; coronary artery disease; migration; reactive oxygen species; oxidative stress

32 Fong CJ, Burgoon LD, Williams KJ, Jones AD, Forgacs AL, Zacharewski TR2010 Effects of tamoxifen and ethynylestradiol cotreatment on uterine gene expression in immature, ovariectomized mice

J Mol Endocrinol. 2010; 45(3):161-173 10.1677/JME-09-0158 20628019 no Nexterion Slide E

33 Fridman E, Dotan Z, Barshack I, Ben David M, Dov A, Tabak S, Zion O, Benjamin S, Benjamin H, Kuker H, Avivi C, Rosenblatt K, Polak-Charcon S, Ramon J, Rosenfeld N, Spector Y2010 Accurate molecular classification of renal tumors using microRNA expression J Mol Diagn. 2010; in press 10.2353/jmoldx.2010.090187 20595629 no Nexterion Slide E

34 Fukasawa M, Atsuzawa K, Mizutani K, Nakazawa A, Usuda N2010 Immunohistochemical localization of mitochondrial fatty acid •-oxidation enzymes in rat testis

J Histochem Cytochem. 2010; 58(2):195-206 10.1369/jhc.2009.954693 19875848 no Nexterion Slide A+ (?) testis; mitochondria; fatty acid •-oxidation; immunohistochemistry; electron microscopy; Leydig cell; Sertoli cell; seminiferous epithelium

35 Gandhiraman RP, Gubala V, Nam LCH, Volcke C, Doyle C, James B, Daniels S, Williams DE2010 Deposition of chemically reactive and repellent sites on biosensor chips for reduced non-specific binding

Colloids Surf B Biointerfaces. 2010; 79(1):270-275 10.1016/j.colsurfb.2010.04.009 20452191 no Nexterion Slide E PECVD; amine functionalisation; cyclo olefin copolymer; non specific binding

36 Gerin I, Bommer GT, McCoin CS, Sousa KM, Krishnan V, MacDougald OA2010 Roles for miRNA-378/378* in adipocyte gene expression and lipogenesis Am J Physiol Endocrinol Metab. 2010; 299(2):E198-206 10.1152/ajpendo.00179.2010 20484008 no Nexterion Slide E adipogenesis; PGC-1•

37 Grunwald I, Groth E, Wirth I, Schumacher J , Maiwald M, Zoellmer V, Busse M2010 Surface biofunctionalization and production of miniaturized sensor structures using aerosol printing technologies

Biofabrication. 2010; 2:014106 10.1088/1758-5082/2/1/014106 yes Nexterion Slide NC-W 16

38 Gyorgy AB, Walker J, Wingo D, Eidelman O, Pollard HB, Molnar A, Agoston DV2010 Reverse phase protein microarray technology in traumatic brain injury J Neurosci Methods. 2010; in press 10.1088/10.1016/j.jneumeth.2010.07.029 20674607 no Nexterion Slide NC-W, Nexterion Slide NC-D

antibody; specificity; reverse-capture proteinmicroarray; bioinformatics; traumatic braininjury

39 Hackl M, Brunner S, Fortschegger K, Schreiner C, Micutkova L, Mück C, Laschober GT, Lepperdinger G, Sampson N, Berger P, Herndler-Brandstätter D, Wieser M, Kühnel H, Strasser A, Rinnerthaler M, Breitenbach M, Mildner M, Eckhart L, Tschachler E, Trost A, Bauer JW, Papak C, Trajanoski Z, Scheideler M, Grillari-Voglauer R, Grubeck-Loebenstein B, Jansen-Dürr P, Grillari J2010 miR-17, miR-19b, miR-20a and miR-106a are down-regulated in human aging Aging Cell. 2010; 9(2):291-296 10.1111/j.1474-9726.2010.00549.x 20089119 no Nexterion Slide E aging; senescence; miRNA microarray; miR-17-92 cluster; p21 (CDKN1A); miR-17; miR-19b; miR-20a; miR-106a

40 He M, Stoevesandt O2010 In situ biosynthesis of peptide arrays Methods Mol Biol. 2010; 615:345-356 10.1007/978-1-60761-535-4_24 20013219 no Nexterion Slide E peptide array, cell-free protein synthesis

41 Hoenemann C, Richardt S, Krüger K, Zimmer AD, Hohe A, Rensing SA2010 Large impact of the apoplast on somatic embryogenesis in Cyclamen persicum offers possibilities for improved developmental control in vitro

BMC Plant Biol. 2010; 10:77 10.1186/1471-2229-10-77 20426818 yes Nexterion Slide E

42 Hsieh CL, Grange R, Pu Y, Psaltis D2010 Bioconjugation of barium titanate nanocrystals with immunoglobulin G antibody for second harmonic radiation imaging probes

Biomaterials. 2010; 31(8):2272-2277 10.1016/j.biomaterials.2009.11.096 20004017 no Nexterion Slide AL confocal microscopy; cross-linking; immunochemistry; in vitro test; nanoparticle; surface modification

43 Ivanov SV, Goparaju CM, Lopez P, Zavadil J, Toren-Haritan G, Rosenwald S, Hoshen M, Chajut A, Cohen D, Pass HI2010 Pro-tumorigenic effects of miR-31 loss in mesothelioma J Biol Chem. 2010; 285(30):22809-22817 10.1074/jbc.M110.100354 20463022 yes Nexterion Slide E

44 Kontunen-Soppela S, Parviainen J, Ruhanen H, Brosché M, Keinänen M, Thakur RC, Kolehmainen M, Kangasjärvi J, Oksanen E, Karnosky DF, Vapaavuori E2010 Gene expression responses of paper birch (Betula papyrifera) to elevated CO2 and O3 during leaf maturation and senescence

Environ Pollution. 2010; 158(4):959-968 10.1016/j.envpol.2009.10.008 19889492 no Nexterion HiSens E Betula papyrifera; clustering; CO2; FACE experiment; gene expression; microarray; ozone; paper birch

45 Kontunen-Soppela S, Riikonen J , Ruhanen H, Brosché M, Somervuo P, Peltonen P, Kangasjärvi J, Auvinen P, Paulin L , Keinänen M , Oksanen E, Vapaavuori E 2010 Differential gene expression in senescing leaves of two silver birch genotypes in response to elevated CO2 and tropospheric ozone

Plant Cell Environ. 2010; 33(6):1016-1028 10.1111/j.1365-3040.2010.02123.x 20132521 no Nexterion Slide E Betula pendula; gas exchange; leaf senescence; long-term experiment; O3 ; phenology

46 Leinberger DM, Grimm V, Rubtsova M, Weile J, Schröppel K, Wichelhaus TA, Knabbe C, Schmid RD, Bachmann TT.2010 Integrated detection of extended spectrum beta-lactam resistance by DNA microarray-based genotyping of TEM, SHV, and CTX-M genes

J Clin Microbiol. 2010; 48(2):460-471 10.1128/JCM.00765-09 20007393 no Nexterion Slide E Nexterion Spot

47 Liao M, Raczynski AR, Chen M, Chuamg BC, Zhu Q, Shipman R, Morrison J, Lee D, Lee FW, Balani SK, Xia CQ2010 Inhibition of hepatic OATP by RNAi in sandwich-cultured human hepatocytes: An in vitro model to assess transporter-mediated drug-drug interactions

Drug Metab Dispos. 2010; 38(9):1612-1622 10.1124/dmd.110.032995 20516252 yes Nexterion Block E, Nexterion Hyb

48 Liu F, Dubey M, Takahashi H, Castner DG, Grainger DW2010 Immobilized antibody orientation analysis using secondary ion mass spectrometry and fluorescence imaging of affinity-generated patterns

Anal Chem. 2010; 82(7):2947-2958 10.1021/ac902964q 20230047 no Nexterion Slide H

49 Marimon JM, Monasterio A, Ercibengoa M, Pascual J, Prieto I, Simón L, Perez-Trallero E2010 Antibody microarray typing, a novel technique for Streptococcus pneumoniae serotyping

J Microbiol Methods. 2010; 80(3):274-280 10.1016/j.mimet.2010.01.011 20093147 no Nexterion Slide E MPX-12 antibody microarray; quellung; serotyping; Streptococcus pneumoniae

50 Marsaud V, Tchakarska G, Andrieux G, Liu JM, Dembele D, Jost B, Wdzieczak-Bakala J, Renoir JM, Sola B2010 Cyclin K and cyclin D1b are oncogenic in myeloma cells Mol Cancer. 2010; 9(1):103 10.1186/1476-4598-9-103 20459741 yes Nexterion Slide H51 McAndrew M, Wheeler C, Fallon R, Anson J2010 Autoantibodies as diagnostic biomarkers Genetic Engineering & Biotechnol News. 2010; (11) link Nexterion Slide HS

(discontinued)biomarkers; proteomics; Oxford Gene Technology

52 Mlakar V, Stražišar M, Sok M, Glavac D2010 Oligonucleotide DNA microarray profiling of lung adenocarcinoma revealed significant downregulation and deletions of vasoactive intestinal peptide receptor

Cancer Invest. 2010; 28(5):487-494 10.3109/07357900903476752 20014941 no Nexterion Slide E Nexterion 70mer Oligo Microarraying Kit, Nexterion Hyb

lung cancer, tumor suppressors, cancer genetics

53 Morrison C, Miecznikowski J, Darcy KM, Dolce JM, Kandel E, Erwin DO, Liu S, Shepherd L, Cohn D, McMeekin DS, Block AMW, Nowak NJ, Maxwell L2010 A GOG 210 ACGH study of gain at 1q23 in endometrioid endometrial cancer in the context of racial disparity and outcome

Genes Chromosomes Cancer. 2010; 49(9):791-802 10.1002/gcc.20782 20607851 no Nexterion Slide A+

54 Moschallski M, Baader J, Prucker O, Rühe J2010 Printed protein microarrays on unmodified plastic substrates Anal Chim Acta. 2010; 671(1-2):92-98 10.1016/j.aca.2010.05.008 20541648 no Nexterion Glass B or D protein immobilization; plastic chips; microarray; polymer networks

55 Nemir A, David MM, Perrussel R, Sapkota A, Simonet P, Monier JM, Vogel TM2010 Comparative phylogenetic microarray analysis of microbial communities in TCE-contaminated soils

Chemosphere. 2010; 80(5):600-607 10.1016/j.chemosphere.2010.03.036 20444493 no Nexterion Slide AL pollution impact; microbial perturbation; microarray; chlorinated solvents; bioindicator; bacteria; bhylochip

56 Pass HI, Goparaju C, Ivanov S, Donington J, Carbone M, Hoshen M, Cohen D, Chajut A, Rosenwald S, Dan H, Benjamin S, Aharonov R2010 hsa-miR-29c* is linked to the prognosis of malignant pleural mesothelioma Cancer Res. 2010; 70(5):1916-1924 10.1158/0008-5472.CAN-09-3993 20160038 no Nexterion Slide E mesothelioma; microRNA; prognosis

57 Pereira PM, Marques JP, Soares AR, Carreto L, Santos MA2010 MicroRNA expression variability in human cervical tissues PLoS One. 2010; 5(7):e11780 10.1371/journal.pone.0011780 20668671 yes Nexterion Slide E58 Pla-Roca M, Leulmi RF, Djambazian H, Sundararajan S, Juncker D2010 Addressable nanowell arrays formed using reversibly sealable hybrid elastomer-

metal stencilsAnal Chem. 2010; 82(9):3848-3855 10.1021/ac100335d 20377190 no Nexterion Slide E

59 Poltronieri P, Cimaglia F, Santino A, De Blasi MD, Krizkova-Kudlikova I, Liu S, Wang Y, Wang Y2010 Protein chips for detection of mite allergens using Kunitz-type protease inhibitors

Biotechnol J. 2010; 5(6):582-587 link 20518061 no Nexterion Slide E analytical biotechnology; biosensors; protease; protease inhibitor; protein chips

60 Porter A, Yue T, Heeringa L, Day S, Suh E, Haab BB2010 A motif-based analysis of glycan array data to determine the specificities of glycan-binding proteins

Glycobiology. 2010; 20(3):369-380 10.1093/glycob/cwp187 19946132 no Nexterion Slide H glycan arrays; glycan microarrays; lectin; motif analysis; glycan-binding protein

61 Propheter DC, Hsu KL, Mahal LK2010 Fabrication of an oriented lectin microarray Chembiochem. 2010; 11(9):1203-1207 10.1002/cbic.201000106 20486145 no Nexterion Slide H carbohydrates; glycomics; GST; gged proteins; microarrays; recombinant lectin

62 Ramirez AB, Loch CM, Zhang Y, Liu Y, Wang X, Wayner EA, Sargent JE, Sibani S, Hainsworth E, Mendoza EA, Eugene R, Labaer J, Urban ND, McIntosh MW, Lampe PD2010 Use of a single chain antibody library for ovarian cancer biomarker discovery Mol Cell Proteomics. 2010; 9(7):1449-1460 10.1074/mcp.M900496-MCP200 20467042 yes Nexterion Slide H

63 Rosenhahn A, Schilp S, Kreuzer HJ, Grunze M2010 The role of "inert" surface chemistry in marine biofouling prevention Phys Chem Chem Phys. 2010; 12(17):4275-4286 10.1039/c001968m 20407695 no Nexterion Glass B or D

64 Safavieh R, Pla Roca M, Qasaimeh MA, Mirzaei M, Juncker D2010 Straight SU-8 pins J Micromech Microeng. 2010; 20(5):055001 10.1088/0960-1317/20/5/055001 no Nexterion Slide E65 Sagan SM, Nasheri N, Luebbert C, Pezacki JP2010 The efficacy of siRNAs against hepatitis C virus is strongly influenced by

structure and target site accessibilityChem Biol. 2010;17(5):515-527 10.1016/j.chembiol.2010.04.011 20534349 no Nexterion Slide E

66 Sapkota AR, Berger S, Vogel TM2010 Human pathogens abundant in the bacterial metagenome of cigarettes Environ Health Perspect. 2010; 118(3):351-356 10.1289/ehp.0901201 20064769 yes Nexterion Slide AL bacteria; bacterial metagenome; cigarettes; pathogens; smoking; tobacco

67 Sawle AD, Wit E, Whale G, Cossins AR2010 An information-rich, alternative, chemicals testing strategy using a high definition toxicogenomics and zebrafish (Danio rerio) embryos

Toxicol Sci. 2010; in press 10.1093/toxsci/kfq237 20702589 no Nexterion HiSens E Nexterion Hyb toxicogenomics; microarray; zebrafish; dichloroaniline; pentachlorophenol; cadmium chloride; dichlorophenol

68 Schröder C, Jacob A, Tonack S, Radon TP, Sill M, Zucknick M, Rüffer S, Costello E, Neoptolemos JP, Crnogorac-Jurcevic T, Bauer A, Fellenberg K, Hoheisel JD2010 Dual-color proteomic profiling of complex samples with a microarray of 810 cancer-related antibodies

Mol Cell Proteomics. 2010; 9(6):1271-1280 10.1074/mcp.M900419-MCP200 20164060 yes Nexterion Slide E

69 Schwarz R, Joseph B, Gerlach G, Schramm-Glück A, Engelhard K, Frosch M, Müller T, Schoen C2010 Evaluation of one- and two-color gene expression arrays for microbial comparative genome hybridization analyses in routine applications

J Clin Microbiol. 2010; in press 10.1128/JCM.00233-10 20592156 no Nexterion Slide E

70 Seo JH, Kim CS, Hwang BH, Cha HJ2010 A functional carbohydrate chip platform for analysis of carbohydrate-protein interaction

Nanotechnology. 2010; 21(21):215101 10.1088/0957 20431189 yes Nexterion Slide H

71 Shlomit G, Meiri E, Yerushalmi N2010 Method for detecting nucleic acids United States Patent Application 20100047784 US20100047784 yes Nexterion Slide E

72 Simo G, Herder S, Cuny G, Hoheisel J2010 Identification of subspecies specific genes differentially expressed in procyclic forms of Trypanosoma brucei subspecies

Infect Genet Evol. 2010; 10(2):229-237 10.1016/j.meegid.2009.11.003 19913111 no Nexterion Slide A+ DNA microarray; Trypanosoma brucei subspecies; tsetse fly mid-gut; transmission cycle

73 Sipari H, Rantala-Ylinen A, Jokela J, Oksanen I, Sivonen K2010 Development of a chip assay and qPCR for detecting microcystin synthetase gene E expression

Appl Environ Microbiol. 2010; 76(12):3797-3805 10.1128/AEM.00452-10 20400558 no Nexterion Slide A

74 Smith B, Treadwell J, Zhang D, Ly D, McKinnell I, Walker PR, Sikorska M2010 Large-scale expression analysis reveals distinct microRNA profiles at different stages of human neurodevelopment

PLoS One. 2010; 5(6):e11109 10.1371/journal.pone.0011109 20559549 yes Nexterion Spot II (discontinued)

75 Spahn M, Kneitz S, Scholz CJ, Nico S, Rüdiger T, Ströbel P, Riedmiller H, Kneitz B2010 Expression of microRNA-221 is progressively reduced in aggressive prostate cancer and metastasis and predicts clinical recurrence

Int J Cancer. 2010; 127(2):394-403 10.1002/ijc.24715 19585579 yes Nexterion HiSens E microRNA; high risk prostate carcinoma; metastasis; miR-221;prognosis

76 Steentoft C, Schjoldager KT, Cló E, Mandel U, Levery SB, Pedersen JW, Jensen K, Blixt O, Clausen H2010 Characterization of an immunodominant cancer-specific O-glycopeptide epitope in murine podoplanin (OTS8)

Glycoconj J. 2010; in press 10.1007/s10719-010-9301-6 20721622 no Nexterion Slide H MPX-16 autoantibody; o-glycosylation; o-glycopeptide; podoplanin

77 Todorovic V, Sersa G, Mlakar V, Glavac D, Flisar K, Cemazar M2010 Metastatic potential of melanoma cells is not affected by electrochemotherapy Melanoma Res. 2010; in press 10.1097/CMR.0b013e328337abd7 20216102 no Nexterion Slide E Nexterion 70mer Oligo Microarraying Kit

cisplatin; electrochemotherapy; electroporation; invasion; melanoma; migration

78 Uziel O, Beery E, Dronichev V, Samocha K, Gryaznov S, Weiss L, Slavin S, Kushnir M, Nordenberg Y, Rabinowitz C, Rinkevich B, Zehavi T, Lahav M2010 Telomere shortening sensitizes cancer cells to selected cytotoxic agents: in vitro and in vivo studies and putative mechanisms

PLoS One. 2010; 5(2):e9132 10.1371/journal.pone.0009132 20161752 yes Nexterion Slide E

79 Valenzuela-Soto JH, Estrada-Hernández MG, Ibarra-Laclette E, Délano-Frier JP2010 Inoculation of tomato plants (Solanum lycopersicum) with growth-promoting Bacillus subtilis retards whitefly Bemisia tabaci development

Planta. 2010; 231(2):397-410 10.1007/s00425-009-1061-9 20041333 no Nexterion Slide A or A+ MPX-16

Bacillus subtilis; Bemisia tabaci; growth promoting rhizobacteria; iInduced systemic response; jasmonic acid; phenyl propanoids; salicylic acid

80 Vicente CMS, Ferreira RAS, Pecoraro E, André PS, Carlos LD2010 Optical filters and resonant cavities based on di-ureasil organic-inorganic hybrids

J Sol-Gel Sci Technol. 2010; in press 10.1007/s10971-010-2254-1 no Nexterion Glass B organic-inorganic hybrids; integrated optics; sol-gel; waveguides; Fabry-Perot cavities; optical filters

81 Walter JG, Stahl F, Reck M, Praulich I, Nataf Y, Hollas M, Pflanz K, Melzner D, Shoham Y, Scheper T2010 Protein microarrays: Reduced autofluorescence and improved LOD Eng Life Sci. 2010; 10(2):103-108 10.1002/elsc.200900078 no Nexterion Slide A, Nexterion Slide AL, Nexterion Slide H, Nexterion Slide NC-D (discontinued)

background fluorescence; limit of detection; LOD; nitrocellulose; protein microarray

82 Wandall HH, Blixt O, Tarp MA, Pedersen JW, Bennett EP, Mandel U, Ragupathi G, Livingston PO, Hollingsworth MA, Taylor-Papadimitriou J, Burchell J, Clausen H2010 Cancer biomarkers defined by autoantibody signatures to aberrant o-glycopeptide epitopes

Cancer Res. 2010; 70(4):1306-1313 10.1158/0008-5472.CAN-09-2893 20124478 no Nexterion Slide H, Nexterion Slide H MPX-16

autoantibodies; mucin; o-glycosylation; o-glycopeptide; array

83 Williams SR, Girirajan S, Tegay D, Nowak NJ, Hatchwell E, Elsea SH2010 Array comparative genomic hybridization of 52 subjects with a Smith-Magenis-like phenotype: identification of dosage-sensitive loci also associated with schizophrenia, autism, and developmental delay

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84 Wurm Y, Wang J, Keller L2010 Changes in reproductive roles are associated with changes in gene expression in fire ant queens

Mol Ecol. 2010; 19(6):1200-1211 10.1111/j.1365-294X.2010.04561.x 20163551 no Nexterion Slide AL competition; gene expression; reproduction; Solenopsis invicta; time-course

85 Zanardi A, Bandiera D, Bertolini F, Corsini CA, Gregato G, Milani P, Barborini E, Carbone R2010 Miniaturized FISH for screening of onco-hematological malignancies BioTechniques. 2010; 49(1):497-504 10.2144/000113445 20615202 no Nexterion Glass D (ultrasonically cleaned)

FISH; titanium dioxide; onco-hematology; nanomaterial

86 Zeiner GM, Norman KL, Thomson JM, Hammond SM, Boothroyd JC2010 Toxoplasma gondii infection specifically increases the levels of key host microRNAs

PLoS ONE. 2010; 5(1): e8742 10.1371/journal.pone.0008742 20090903 yes Nexterion Slide E

87 Zimmermann JL, Nicolaus T, Neuert G, Blank K2010 Thiol-based, site-specific and covalent immobilization of biomolecules for single-molecule experiments

Nat Protoc. 2010; 5(6):975-985 10.1038/nprot.2010.49 20448543 no Nexterion Slide A+

88 Aharonov R, Rosenfeld N, Rosenwald S, Benjamin H2009 Methods for distinguishing between lung squamous carcinoma and other non small cell lung cancers


89 Ahmed FE, Vos PW, Jeffries C, Wiley JE, Weidner DA, Mota H, Bonnerup C, Sibata C, Allison RR2009 Differences in mRNA and microRNA microarray expression profiles in human colon adenocarcinoma HT-29 cells treated with either intensity-modulated radiation therapy (IMRT), or conventional radiation therapy (RT)

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90 Alberti M, Yacoub-George E, Hell W, Landesberger C, Bock K2009 Biomolecular self-assembly of micrometer sized silica beads on patterned glass substrates

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91 Andresen H, Bier FF2009 Peptide microarrays for serum antibody diagnostics Methods Mol Biol. 2009; 509:123-134 10.1007/978-1-59745-372-1_8 19212718 no Nexterion Slide AL antibody; epitope; immunoassay; serum analysis; epitope mapping; peptide microarray; site-specific immobilization

92 Barrey E, Mucher E, Jeansoule N, Larcher T, Guigand L, Herszberg B, Chaffaux S, Guérin G, Mata X, Benech P, Canale M, Alibert O, Maltere P, Gidrol X2009 Gene expression profiling in equine polysaccharide storage myopathy revealed inflammation, glycogenesis inhibition, hypoxia and mitochondrial dysfunctions

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93 Bauer A, Kleeff J, Bier M, Wirtz M, Kayed H, Esposito I, Korc M, Hafner M, Hoheisel JD, Friess H2009 Identification of malignancy factors by analyzing cystic tumors of the pancreas Pancreatology. 2009; 9(1-2):34-44 10.1159/000178873 19077453 no Nexterion Slide E pancreatic carcinoma; cystic lesions; expression profiling; siRNA silencing; Fas-activated serine/threonine kinase

94 Becker P, Hakenbeck R, Henrich B2009 An ABC transporter of Streptococcus pneumoniae involved in susceptibility to vancoresmycin and bacitracin

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95 Ben Amor B, Wirth S, Merchan F, Laporte P, d'Aubenton-Carafa Y, Hirsch J, Maizel A, Mallory A, Lucas A, Deragon JM, Vaucheret H, Thermes C, Crespi M2009 Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses

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96 Blesa D, Mollejo M, Ruano Y, de Lope AR, Fiaño C, Ribalta T, García JF, Campos-Martín Y, Hernández-Moneo JL, Cigudosa JC, Meléndez B2009 Novel genomic alterations and mechanisms associated with tumor progression in oligodendroglioma and mixed oligoastrocytoma

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97 Blixt O,Kumagai-Braesch M, Tibell A , Groth CG, Holgersson J2009 Anticarbohydrate antibody repertoires in patients transplanted with fetal pig islets revealed by glycan arrays

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98 Boettger T, Beetz N, Kostin S, Schneider J, Krüger M, Hein L, Braun T2009Acquisition of the contractile phenotype by murine arterial smooth muscle cells depends on the Mir143/145 gene cluster

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99 Brembilla NC, Cohen-Salmon I, Weber J, Rüegg C, Quadroni M, Harshman K, Doucey MA2009 Profiling of T-cell receptor signaling complex assembly in human CD4 T-lymphocytes using RP protein arrays

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affinity capture; human CD4 T-cells; RPP arrays; signaling complex; TCR

100 Calabrò A, Beissbarth T, Kuner R, Stojanov M, Benner A, Asslaber M, Ploner F, Zatloukal K, Samonigg H, Poustka A, Sültmann H2009 Effects of infiltrating lymphocytes and estrogen receptor on gene expression and prognosis in breast cancer

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101 Carbone R 2009 An advanced application of protein microarrays: cell-based assays for functional genomics

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protein microarrays; nanobiotechnology; titanium oxide (TiOx); biochips

102 Carbone R, De Marni M, Zanardi A, Vinati S, Barborini E, Fornasari L, Milani P2009 Characterization of cluster-assembled nanostructured titanium oxide coatings as substrates for protein arrays

Anal Biochem. 2009; 394(1):7-12 10.1016/j.ab.2009.07.005 19589333 no Nexterion Glass D (cleanroom cleaned)

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103 Ceppi M, Pereira PM, Dunand-Sauthier I, Barras E, Reith W, Santos MA, Pierre P2009 MicroRNA-155 modulates the interleukin-1 signaling pathway in activated human monocyte-derived dendritic cells

Proc Natl Acad Sci U S A. 2009; 106(8):2735-2740 10.1073/pnas.0811073106 19193853 yes Nexterion Slide E bic/miR-155; LPS; TAB2; TLR/IL-1 pathway

104 Chan ML, Jaramillo G, Ahjeong S, Hristova KR, Horsley DA2009 Scanning magnetoresistance microscopy for imaging magnetically labeled DNA microarrays

Magnetics. 2009; 45(10):4816-4820 10.1109/TMAG.2009.2024876 no Nexterion Slide E DNA microarray; biosensor; magnetic imaging; magnetic tunnel junction (MTJ)

105 Cinier M, Petit M, Williams MN, Fabre RM, Pecorari F, Talham DR, Bujoli B, Tellier C2009 Bisphosphonate adaptors for specific protein binding on zirconium phosphonate-based microarrays

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106 Connon RE, Geist J, Pfeiff J, Loguinov AV, D'Abronzo LS, Wintz H, Vulpe CD, Werner I2009 Linking mechanistic and behavioral responses to sublethal esfenvalerate exposure in the endangered delta smelt; Hypomesus transpacificus (Fam. Osmeridae)

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107 Debaene F, Winssinger N.2009 Self-assembly of PNA-encoded peptides into microarrays Methods Mol Biol. 2009; 570:299-307 10.1007/978-1-60327-394-7_15 19649601 no Nexterion Slide A MPX-16 microarray; peptide nucleic acid (PNA); proteases; multiplexed screening; combinatorila libraries

108 Depledge DP, Evans KJ, Ivens AC, Aziz N, Maroof A, Kaye PM, Smith DF2009 Comparative expression profiling of Leishmania: Modulation in gene expression between species and in different host genetic backgrounds

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109 Derouette JP, Wong C, Burnier L, Morel S, Sutter E, Galan K, Brisset AC, Roth I, Chadjichristos CE, Kwak BR2009 Molecular role of Cx37 in advanced atherosclerosis: A micro-array study Atherosclerosis. 2009; 206(1):69-76 10.1016/j.atherosclerosis.2009.02.020 19345950 no Nexterion Slide AL atherosclerosis; connexin; gap junction; tissue inflammation; matrix degradation; plaque calcification

110 Desimone D, Jayaseelan DD, Pang B, Lee WE, Boccaccini AR2009 Oxide fibre reinforced glass matrix composites with ZrO2 Glass Tech Eur J Glass Sci Technol Part A. 2009, 50(2):121-126link no Nexterion Glass B111 Diercks S, Gescher C, Metfies K, Medlin LK2009 Evaluation of locked nucleic acids for signal enhancement of oligonucleotide

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probes; microalgae; sandwich hybridisation; microarray

112 Dubey M, Emoto K, Cheng F, Gamble LJ, Takahashi H, Grainger DW, Castner DG2009 Surface analysis of photolithographic patterns using ToF-SIMS and PCA Surf Interface Anal. 2009; 41(8):645-652 10.1002/sia.3056 19756241 yes Nexterion Slide H ToF-SIMS; principal component analysis; photolithography; photoresist; surface analysis; pattern

113 Dubey M, Emoto K, Takahashi H, Castner DG, Grainger DW2009 Affinity-based protein surface pattern formation by ligand self-selection from mixed protein solutions

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114 Edwards KJ, Reid AL, Coghill JA, Berry ST, Barker GL2009 Multiplex single nucleotide polymorphism (SNP)-based genotyping in allohexaploid wheat using padlock probes

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115 Eitan R, Kushnir M, Lithwick-Yanai G, David MB, Hoshen M, Glezerman M, Hod M, Sabah G, Rosenwald S, Levavi H2009 Tumor microRNA expression patterns associated with resistance to platinum based chemotherapy and survival in ovarian cancer patients

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116 Estrada-Hernández MG, Valenzuela-Soto JH, Ibarra-Laclette E, Délano-Frier JP2009 Differential gene expression in whitefly Bemisia tabaci-infested tomato (Solanum lycopersicum) plants at progressing developmental stages of the insect's life cycle

Physiol Plant. 2009; 137:44–60 10.1111/j.1399-3054.2009.01260.x 19627556 no Nexterion Slide A or A+ MPX-16

Nexterion MPX-16 Superstructures

117 Even S, Charlier C, Nouaille S, Ben Zakour NL, Cretenet M, Cousin FJ, Gautier M, Cocaign-Bousquet M, Loubière P, Le Loir Y2009 Staphylococcus aureus virulence expression is impaired by Lactococcus lactis in mixed cultures

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118 Fan J, Liu S, Du Y, Morrison J, Shipman R, Pang KS2009 Up-regulation of transporters and enzymes by the vitamin D receptor ligands, 1•,25-dihydroxyvitamin D3 and vitamin D analogs, in the Caco-2 cell monolayer

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119 Fechner P, Pröll F, Carlquist M, Proll G2009 An advanced biosensor for the prediction of estrogenic effects of endocrine-disrupting chemicals on the estrogen receptor alpha

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120 Fouquaert E, Smith DF, Peumans WJ, Proost P, Balzarini J, Savvides SN, Damme EJ2009 Related lectins from snowdrop and maize differ in their carbohydrate-binding specificity

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121 Fyson JR, Nagy Z 2009 Fabrication of a patterned interference filter array deposited by an atmospheric pressure vapour deposition technique

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122 Gaub BM, Kaul C, Zimmermann JL, Carell T, Gaub HE2009 Switching the mechanics of dsDNA by Cu salicylic aldehyde complexation Nanotechnology. 2009; 20(43):434002 10.1088/0957-4484/20/43/434002 19801752 no Nexterion Slide A or A+

123 Giraud G, Schulze H, Bachmann TT, Campbell CJ, R A, Mount, Ghazal P, Khondoker MR, Ross AJ, Ember SW, Ciani I, Tlili C, Walton AJ, Terry JG, Crain J2009 Fluorescence lifetime imaging of quantum dot labeled DNA microarrays Int J Mol Sci. 2009; 10(4): 1930–1941 10.3390/ijms10041930 19468347 yes Nexterion Slide E Nexterion Spot quantum dots (QD); fluorescence lifetime imaging microscopy (FLIM);DNA microarray; lifetime multiplexing

124 Gnjatic S, Wheeler C, Ebner M, Ritter E, Murray A, Altorki NK, Ferrara CA, Hepburne-Scott H, Joyce S, Koopman J, McAndrew MB, Workman N, Ritter G, Fallon R, Old LJ2009 Seromic analysis of antibody responses in non-small cell lung cancer patients and healthy donors using conformational protein arrays

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serum and plasma profiling; data normalization; tumor antigens; ELISA; IgG; validation

125 Gulati S, Smith DF, Air GM2009 Deletions of neuraminidase and resistance to oseltamivir may be a consequence of restricted receptor specificity in recent H3N2 influenza viruses

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126 Halbeisen RE, Gerber AP2009 Stress-dependent coordination of transcriptome and translatome in yeast PLoS Biol. 2009; 7(5):e105 10.1371/journal.pbio.1000105 19419242 yes Nexterion Slide E ribosome; translation regulation; affinity-purification; DNA microarrays; translatome; yeast

127 Halbeisen RE, Scherrer T, Gerber AP2009 Affinity purification of ribosomes to access the translatome Methods. 2009; 48(3):306-310 10.1016/j.ymeth.2009.04.003 19398006 no Nexterion Slide E

128 Han MK, Oh YH, Kang J, Kim YP, Seo S, Kim J, Park K, Kim HS2009 Protein profiling in human sera for identification of potential lung cancer biomarkers using antibody microarray

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129 Hauser NC, Dukalska M, Fellenberg K, Rupp S2009 From experimental setup to data analysis in transcriptomics: copper metabolism in the human pathogen Candida albicans

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130 Hendrickson DG, Hogan DJ, McCullough HL, Myers JW, Herschlag D, Ferrell JE, Brown PO2009 Concordant regulation of translation and mRNA abundance for hundreds of targets of a human microRNA

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131 Hester SD, Reid L, Nowak N, Jones WD, Parker JS, Knudtson K, Ward W, Tiesman J, Denslow ND2009 Comparison of comparative genomic hybridization technologies across microarray platforms

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132 Ho D, Falter K, Severin P, Gaub HE2009 DNA as a force sensor in an aptamer-based biochip for adenosine Anal Chem. 2009; 81(8):3159-3164 10.1021/ac802766j 19364143 no Nexterion Slide AL

133 Holbein S, Wengi A, Decourty L, Freimoser FM, Jacquier A, Dichtl B2009 Cordycepin interferes with 3' end formation in yeast independently of its potential to terminate RNA chain elongation

RNA. 2009; 15(5):837-849 10.1261/rna.1458909 19324962 yes Nexterion Slide E cordycepin; ATP; poly(A); 39 end formation; transcription; RNA; Saccharomyces cerevisiae

134 Hong JW, Park JY, Fomina M, Gadd GM2009 Development and optimization of an 18S rRNA-based oligonucleotide microarray for the fungal order Eurotiales

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18S rRNA-based oligonucleotide microarray; Eurotiales; fungi; identification

135 Hsiao SC, Shum BJ, Onoe H, Douglas ES, Gartner ZJ, Mathies RA, Bertozzi CR, Francis MB2009 Direct cell surface modification with DNA for the capture of primary cells and the investigation of myotube formation on defined patterns

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136 Hsu TL, Cheng SC, Yang WB, Chin SW, Chen BH, Huang MT, Hsieh SL, Wong CH2009 Profiling carbohydrate-receptor interaction with recombinant innate immunity receptor-Fc fusion proteins

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137 Hu S, Wong DT 2009 Lectin microarray Proteomics Clin Appl. 2009; 3:148-154 10.1002/prca.200800153 no Nexterion Slide H glycan; lectin; oral cancer; protein microarray

138 Hurst R, Hook B, Slater MR, Hartnett J, Storts DR, Nath N2009 Protein-protein interaction studies on protein arrays: Effect of detection strategies on signal-to-background ratios

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139 Janissen R, Oberbarnscheidt L, Oesterhelt F2009 Optimized straight forward procedure for covalent surface immobilization of different biomolecules for single molecule applications

Colloids Surf B Biointerfaces. 2009; 71(2):200-207 10.1016/j.colsurfb.2009.02.011 19329289 no Nexterion Glass B or D surface chemistry; protein immobilization; DNA immobilization; peptide immobilization; atomic force microscopy

140 Jeffs AR, Glover AC, Slobbe LJ, Wang L, He S, Hazlett JA, Awasthi A, Woolley AG, Marshall ES, Joseph WR, Print CG, Baguley BC, Eccles MR2009 A gene expression signature of invasive potential in metastatic melanoma cells PLoS One. 2009; 4(12):e8461 10.1371/journal.pone.0008461 20041153 yes Nexterion Slide E

141 Ketterer K, Kong B, Frank D, Giese NA, Bauer A, Hoheisel J, Korc M, Kleeff J, Michalski CW, Friess H2009 Neuromedin U is overexpressed in pancreatic cancer and increases invasiveness via the hepatocyte growth factor c-Met pathway

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142 Kim S, Dere E, Burgoon LD, Chang CC, Zacharewski TR2009 Comparative analysis of AhR-mediated TCDD elicited gene expression in human liver adult stem cells

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143 Kim YP, Park S, Oh E, Oh YH, Kim HS2009 On-chip detection of protein glycosylation based on energy transfer between nanoparticles

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144 Knapen D, Vergauwen L, Laukens K, Blust R2009 Best practices for hybridization design in two-colour microarray analysis Trends Biotechnol. 2009; 27(7):406-414 10.1016/j.tibtech.2009.03.007 19481825 no Nexterion Slide A+

145 Kuno A, Kato Y, Matsuda A, Kaneko MK, Ito H, Amano K, Chiba Y, Narimatsu H, Hirabayashi J2009 Focused differential glycan analysis with the platform antibody-assisted lectin profiling for glycan-related biomarker verification

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146 Kurt K, Alderborn A, Nilsson M, Strommenger B, Witte W, Nübel U.2009 Multiplexed genotyping of methicillin-resistant Staphylococcus aureus isolates by use of padlock probes and tag microarrays

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147 Kwekel JC, Forgacs AL, Burgoon LD, Williams KJ, Zacharewski TR2009 Tamoxifen-elicited uterotrophy: cross-species and cross-ligand analysis of the gene expression program

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148 Kyselková M, Kopecký J, Frapolli M, Défago G, Ságová-Marecková M, Grundmann GL, Moënne-Loccoz Y2009 Comparison of rhizobacterial community composition in soil suppressive or conducive to tobacco black root rot disease

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149 Lalo H, Vieu C 2009 Nanoscale patterns of dendrimers obtained by soft lithography using elastomeric stamps spontaneously structured by plasma treatment

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150 Lechner M, Schmitt K, Bauer S, Hot D, Hubans C, Levillain E, Locht C, Lemoine Y, Gross R2009 Genomic island excisions in Bordetella petrii BMC Microbiol. 2009; 9:141 10.1186/1471-2180-9-141 19615092 yes Nexterion Slide AL151 Liang CH, Wang CC, Lin YC, Chen CH, Wong CH, Wu CY2009 Iron oxide/gold core/shell nanoparticles for ultrasensitive detection of

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152 Lyle R, Béna F, Gagos S, Gehrig C, Lopez G, Schinzel A, Lespinasse J, Bottani A, Dahoun S, Taine L, Doco-Fenzy M, Cornillet-Lefèbvre P, Pelet A, Lyonnet S, Toutain A, Colleaux L, Horst J, Kennerknecht I, Wakamatsu N, Descartes M, Franklin JC, Florentin-Arar L, Kitsiou S, Aït Yahya-Graison E, Costantine M, Sinet PM, Delabar JM, Antonarakis SE.2009 Genotype-phenotype correlations in Down syndrome identified by array CGH in 30 cases of partial trisomy and partial monosomy chromosome 21

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153 Magold AI, Cacquevel M, Fraering PC2009Gene expression profiling in cells with enhanced gamma-secretase activity

PLoS One. 2009; 4(9):e6952 10.1371/journal.pone.0006952 19763259 yes Nexterion Slide AL

154 Mankidy PJ, Rajagopalan R, Pantano CG, Foley HC 2009 Surface initiated growth of poly(ethyl 2-cyanoacrylate) nanofibers on surface-modified glass substrates

Chem Mater. 2009, 21(5):831–842 10.1021/cm8022133 no Nexterion Slide A

155 Marella NV, Malyavantham KS, Wang J, Matsui S, Liang P, Berezney R2009 Cytogenetic and cDNA microarray expression analysis of MCF10 human breast cancer progression cell lines

Cancer Res. 2009; 69(14):5946-5953 10.1158/0008-5472.CAN-09-0420 19584277 no Nexterion Slide A+

156 Mauritz R 2009 Substrate for nucleic acid amplification United States Patent Application 20090203083 US20090203083 yes Nexterion Slide A, Nexterion Slide A+

157 Millard AD, Tiwari B2009 Oligonucleotide microarrays for bacteriophage expression studies Methods Mol Biol. 2009; 502:193-226 10.1007/978-1-60327-565-1_12 19082558 no Nexterion Slide E Nexterion Block E, Nexterion Hyb

bacteriophage gene expression; bacteriophage microarrays; oligonucleotide probe design; hybridisation

158 Mir KU, Qi H, Salata O, Scozzafava G.2009 Sequencing by Cyclic Ligation and Cleavage (CycLiC) directly on a microarray captured template

Nucleic Acids Res. 2009; 37(1):e5 10.1093/nar/gkn906 19015154 yes Nexterion Slide H

159 Mlakar V, Berginc G, Volavsek M, Stor Z, Rems M, Glavac D2009 Presence of activating KRAS mutations correlates significantly with expression of tumour suppressor genes DCN and TPM1 in colorectal cancer

BMC Cancer. 2009, 9:282 10.1186/1471-2407-9-282 19678923 yes Nexterion Slide E Nexterion 70mer Oligo Microarraying Kit, Nexterion Hyb

160 Mlakar V, Todorovic V, Cemazar M, Glavac D, Sersa G2009 Electric pulses used in electrochemotherapy and electrogene therapy do not significantly change the expression profile of genes involved in the development of cancer in malignant melanoma cells

BMC Cancer. 2009; 9:299 10.1186/1471-2407-9-299 19709437 yes Nexterion Slide E Nexterion 70mer Oligo Microarraying Kit, Nexterion Hyb

161 Monson CF, Driscoll LN, Bennion E, Miller CJ, Majda M2009 Antibody-antigen exchange equilibria in a field of an external force: design of reagentless biosensors

Anal Chem. 2009; 81(17):7510-7514 10.1021/ac9010759 19639946 no Nexterion Slide AL

162 Monson CF, Driscoll LN, Khoie S, Bennion E, Miller CJ, Majda M2009 Antibody-antigen equilibria in a field of magnetic forces: Design of reagentless biosensors

ECS Transactions - San Francisco. 2009; 19(6):79-91 link no Nexterion Slide AL

163 Morey C, Kress C, Bickmore WA2009 Lack of bystander activation shows that localization exterior to chromosome territories is not sufficient to up-regulate gene expression

Genome Res. 2009; 19(7):1184-1194 10.1101/gr.089045.108 19389823 yes Nexterion Spot

164 Muranyi P, Schraml C, Wunderlich J2009 Antimicrobial efficiency of titanium dioxide-coated surfaces J Appl Microbiol. 2009; 108(6):1966-1973 10.1111/j.1365-2672.2009.04594.x 19886892 no Nexterion Glass B anatase; antimicrobial surfaces; disinfection; photocatalysis; titanium dioxide (TiO2)

165 Nass D, Rosenwald S, Meiri E, Gilad S, Tabibian-Keissar H, Schlosberg A, Kuker H, Sion-Vardy N, Tobar A, Kharenko O, Sitbon E, Lithwick Yanai G, Elyakim E, Cholakh H, Gibori H, Spector Y, Bentwich Z, Barshack I, Rosenfeld N2009 MiR-92b and miR-9/9* are specifically expressed in brain primary tumors and can be used to differentiate primary from metastatic brain tumors

Brain Pathol. 2009; 19(3):375-383 link 18624795 yes Nexterion Slide E microRNA expression; molecular diagnostics; tumor classification

166 Nyyssönen M, Kapanen A, Piskonen R, Lukkari T, Itävaara M2009 Functional genes reveal the intrinsic PAH biodegradation potential in creosote-contaminated groundwater following in situ biostimulation

Appl Microbiol Biotechnol. 2009; 84(1):169-182 10.1007/s00253-009-2022-8 19458949 no Nexterion Slide A+ bioremediation; functional gene; gene array; polycyclic aromatic hydrocarbon; air sparging;nutrient infiltration

167 Pasquer F, Pfunder M, Frey B, Frey JE 2009 Microarray-based genetic identification of beneficial organisms as a new tool for quality control of laboratory cultures

Biocontr Sci Technol. 2009; 19(8):809-833 10.1080/09583150903134509 no Nexterion Slide E microarray; genetic identification; cytochrome oxidase I; beneficials; arthropods; quality control

168 Pothof J, Verkaik NS, van IJcken W, Wiemer EA, Ta VT, van der Horst GT, Jaspers NG, van Gent DC, Hoeijmakers JH, Persengiev SP2009 MicroRNA-mediated gene silencing modulates the UV-induced DNA-damage response

EMBO J. 2009; 28(14):2090-2099 10.1038/emboj.2009.156 19536137 no Nexterion Slide E cell cycle checkpoints; DNA damage; microRNAs; stress granules

169 Pultar J, Sauer U, Domnanich P, Preininger C2009 Aptamer-antibody on-chip sandwich immunoassay for detection of CRP in spiked serum

Biosens Bioelectron. 2009; 24(5):1456-1461 10.1016/j.bios.2008.08.052 18951012 no Nexterion Spot aptamer chip; C-reactive protein; sandwich immunoassay; spiked serum

170 Raguse B, Barton CS, Müller KH, Chow E, Wieczorek L2009 Gold nanoparticle chemiresistor sensors in aqueous solution: comparison of hydrophobic and hydrophilic nanoparticle films

J Phys Chem C. 2009; 113(34):15390-15397 10.1021/jp9034453 no Nexterion Glass B

171 Rahman A, Robinson W, Garren H, King R, Kaysser-Kranich T, Shafer C, Knipmeyer B2009 Use of JMP® for optimizing a custom peptide microarray to identify autoantibodies for multiple sclerosis

SAS Institute Inc. White Paper link yes Nexterion Slide E MPX-16

172 Richens JL, Lunt EA, Sanger D, McKenzie G, O'Shea P2009 Avoiding nonspecific interactions in studies of the plasma proteome: practical solutions to prevention of nonspecific interactions for label-free detection of low-abundance plasma proteins

J Proteome Res. 2009; 8(11):5103-5110 10.1021/pr900487y 19817376 no Nexterion Slide E plasma proteome; albumin; thiocyanate; microarray; blood; cytokine

173 Rimini R, Schwenk JM, Sundberg M, Sjöberg R, Klevebring D, Gry M, Uhlén M, Nilsson P2009 Validation of serum protein profiles by a dual antibody array approach J Proteomics. 2009; 73(2):252-266 10.1016/j.jprot.2009.09.009 19781670 no Nexterion Slide AL, Nexterion Slide P

antibody microarray; planar microarray; suspension bead array; serum profiling; antibody proteomics

174 Rosenhahn A, Finlay JA, Pettit ME, Ward A, Wirges W2009 Zeta potential of motile spores of the green alga Ulva linza and the influence of electrostatic interactions on spore settlement and adhesion strength

Biointerphases. 2009; 4(1):7-11 10.1116/1.3110182 20408711 yes Nexterion Glass B or D

175 San Paolo S, Vanacova S, Schenk L, Scherrer T, Blank D, Keller W, Gerber AP2009Distinct roles of non-canonical poly(A) polymerases in RNA metabolism

PLoS Genet. 2009; 5(7):e1000555 10.1371/journal.pgen.1000555 19593367 yes Nexterion Slide E

176 Sarkar D, Parkin R, Wyman S, Bendoraite A, Sather C, Delrow J, Godwin AK, Drescher C, Huber W, Gentleman R, Tewari M2009 Quality assessment and data analysis for microRNA expression arrays Nucleic Acids Res. 2009; 37(2):e17 10.1093/nar/gkn932 19103660 yes Nexterion Slide E

177 Sauer U, Bodrossy L, Preininger C2009 Evaluation of substrate performance for a microbial diagnostic microarray using a four parameter ranking

Anal Chim Acta. 2009; 632(2):240-246 10.1016/j.aca.2008.11.016 19110100 no Nexterion Slide E microbial diagnostic microarray; microarray substrates; immobilization; ranking

178 Schilp S, Rosenhahn A, Pettitt ME, Bowen J, Callow ME, Callow JA, Grunze M2009 Physicochemical properties of (ethylene glycol)-containing self-assembled monolayers relevant for protein and algal cell resistance

Langmuir. 2009; 25(17):10077-10082 10.1021/la901038g 19469528 no Nexterion Glass B

179 Schmoock G, Ehricht R, Melzer F, Rassbach A, Scholz HC, Neubauer H, Sachse K, Mota RA, Saqib M, Elschner M.2009 DNA microarray-based detection and identification of Burkholderia mallei, Burkholderia pseudomallei and Burkholderia spp

Mol Cell Probes. 2009; 23(3-4):178-187 10.1016/j.mcp.2009.04.001 19366627 (no) Nexterion Spot Burkholderia mallei; Burkholderia pseudomallei; oligonucleotide microarray; hybridization; multiplex PCR; biotin labeling

180 Schubert-Unkmeir A, Schramm-Glück A, Frosch M, Schoen C2009 Transcriptome analyses in the interaction of Neisseria meningitidis with mammalian host cells

Methods Mol Biol. 2009; 470:5-27 10.1007/978-1-59745-204-5_2 19089372 no Nexterion Slide E Neisseria meningitidis; infection biology; cellular microbiology; gene expression; transcriptomics; microarrays

181 Schwers S, Reifenberger E, Gehrmann M, Izmailov A, Bohmann K2009 A high-sensitivity, medium-density, and target amplification-free planar waveguide microarray system for gene expression analysis of formalin-fixed and paraffin-embedded tissue

Clin Chem. 2009; 55(11):1995-2003 10.1373/clinchem.2009.128215 19745061 no Nexterion Slide E

182 Sers C, Kuner R, Falk CS, Lund P, Sueltmann H, Braun M, Buness A, Ruschhaupt M, Conrad J, Mang-Fatehi S, Stelniec I, Krapfenbauer U, Poustka A, Schäfer R2009 Down-regulation of HLA Class I and NKG2D ligands through a concerted action of MAPK and DNA methyltransferases in colorectal cancer cells

Int J Cancer. 2009; 125(7):1626-1639 10.1002/ijc.24557 19569244 no Nexterion Slide E RAS; oncogene; DNA methylation; HLA; immune suppression; signal transduction; colorectal cancer

183 Singh SK, Streng-Ouwehand I, Litjens M, Weelij DR, García-Vallejo JJ, van Vliet SJ, Saeland E, van Kooyk Y2009 Characterization of murine MGL1 and MGL2 C-type lectins: Distinct glycan specificities and tumor binding properties

Mol Immunol. 2009; 46(6):1240-1249 10.1016/j.molimm.2008.11.021 19162326 no Nexterion Slide H C-type lectins; MGL; carbohydrate recognition; antigen presenting cells

184 Smith L, Qutob O, Watson MB, Beavis AW, Potts D, Welham KJ, Garimella V, Lind MJ, Drew PJ, Cawkwell L2009 Proteomic identification of putative biomarkers of radiotherapy resistance: a possible role for the 26S proteasome?

Neoplasia. 2009; 11(11):1194-1207 link 19881955 yes Nexterion Slide E Nexterion Block E, Nexterion Hyb

185 Song X, Lasanajak Y, Olson LJ, Boonen M, Dahms NM, Kornfeld S, Cummings RD, Smith DF2009 Glycan microarray analysis of P-type lectins reveals distinct phosphomannose glycan recognition

J Biol Chem. 2009; 284(50):35201-35214 10.1074/jbc.M109.056119 19801653 no Nexterion Slide H

186 Song X, Lasanajak Y, Rivera-Marrero C, Luyai A, Willard M, Smith DF, Cummings RD2009 Generation of a natural glycan microarray using 9-fluorenylmethyl chloroformate (FmocCl) as a cleavable fluorescent tag

Anal Biochem. 2009; 395(2):151-160 10.1016/j.ab.2009.08.024 19699706 no Nexterion Slide H glycan array; fluorescent labeling; immobilization; functional glycomics

187 Song X, Lasanajak Y, Xia B, Smith DF, Cummings RD2009 Fluorescent glycosylamides produced by microscale derivatization of free glycans for natural glycan microarrays

ACS Chem Biol. 2009; 4(9):741-750 10.1021/cb900067h 19618966 yes Nexterion Slide H

188 Song X, Xia B, Stowell SR, Lasanajak Y, Smith DF, Cummings RD2009 Novel fluorescent glycan microarray strategy reveals ligands for galectins Chem Biol. 2009; 16(1):36-47 10.1016/j.chembiol.2008.11.004 19171304 yes Nexterion Slide H galectin; glycan microarray; fluorescent labeling; immobilization; functional glycomics

189 Southern E, Meuleman W, Lueerssen, DWK, Milner N2009 Devices and processes for analysing individual cells United States Patent Application 20090098541 US20090098541 yes Nexterion Slide H190 Steenkeste N, Dillies MA, Khim N, Sismeiro O, Chy S, Lim P, Crameri A, Bouchier C, Mercereau-Puijalon O, Beck HP, Imwong M, Dondorp AM, Socheat D, Rogier C, Coppée JY, Ariey F2009 FlexiChip package: an universal microarray with a dedicated analysis software

for high-thoughput SNPs detection linked to anti-malarial drug resistanceMalaria J. 2009; 8:229 10.1186/1475-2875-8-229 19828052 yes Nexterion Slide AL MPX-12

191 Stowell SR, Cho M, Feasley CL, Arthur CM, Song X, Colucci JK, Karmakar S, Mehta P, Dias-Baruffi M, McEver RP, Cummings RD2009 Ligand reduces galectin-1 sensitivity to oxidative inactivation by enhancing dimer formation

J Biol Chem. 2009; 284(8):4989-4999 10.1074/jbc.M808925200 19103599 yes Nexterion Slide H

192 Subramanyam S, Smith DF, Clemens JC, Webb MA, Sardesai N, Williams CE2009 Functional characterization of HFR1, a high-mannose N-glycan-specific wheat lectin induced by Hessian fly larvae

Plant Physiol. 2008; 147(3):1412-1426 10.1104/pp.108.116145 18467454 yes Nexterion Slide H

193 Tasso M, Pettitt ME, Cordeiro AL, Callow ME, Callow JA, Werner C2009 Antifouling potential of Subtilisin A immobilized onto maleic anhydride copolymer thin films

Biofouling. 2009; 25(6):505-516 10.1080/08927010902930363 19387876 no Nexterion Glass B immobilized enzymes; maleic anhydride copolymers; Subtilisin Carlsberg; antifouling; Ulva; Navicula

194 Taylor ME, Drickamer K2009 Structural insights into what glycan arrays tell us about how glycan-binding proteins interact with their ligands

Glycobiology. 2009; 19(11):1155-1162 10.1093/glycob/cwp076 19528664 yes Nexterion Slide H glycan array; glycan-binding receptor; lectin; modeling; structure

195 Thube SA, Budhwani SB, Patel AM2009 DNA microarray technology: The future J Pharm Res. 2009; 2(12):1823-1833 link yes Nexterion Glass B, Nexterion Glass D

DNA microarray; gene array; DNA chip; biochip; genome; oligonucleotide chip

196 Tsao EH, Kellam P, Sin CS, Rasaiyaah J, Griffiths PD, Clark DA2009 Microarray-based determination of the lytic cascade of human herpesvirus 6B J Gen Virol. 2009; 90(Pt 11):2581-2591 10.1099/vir.0.012815-0 19625464 no Nexterion Slide A or A+

197 Tzur G, Israel A, Levy A, Benjamin H, Meiri E, Shufaro Y, Meir K, Khvalevsky E, Spector Y, Rojansky N, Bentwich Z, Reubinoff BE, Galun E.2009 Comprehensive gene and microRNA expression profiling reveals a role for microRNAs in human liver development


198 Uzarowska A, Dionisio G, Sarholz B, Piepho HP, Xu M, Ingvardsen CR, Wenzel G, Lübberstedt T2009 Validation of candidate genes putatively associated with resistance to SCMV and MDMV in maize (Zea mays L.) by expression profiling

BMC Plant Biol. 2009; 9:15 10.1186/1471-2229-9-15 19187556 yes Nexterion Slide A+

199 van Doorn R, Slawiak M, Szemes M, Dullemans AM, Bonants P, Kowalchuk GA, Schoen CD2009 Robust detection and identification of multiple oomycetes and fungi in environmental samples by using a novel cleavable padlock probe-based ligation detection assay

Appl Environ Microbiol. 2009; 75(12):4185-4193 10.1128/AEM.00071-09 19395562 yes Nexterion Slide E MPX-16 Nexterion MPX-16 Superstructures

200 Vékony H, Röser K, Löning T, Ylstra B, Meijer GA, van Wieringen WN, van de Wiel MA, Carvalho B, Kok K, Leemans CR, van der Waal I, Bloemena E2009 Copy number gain at 8q12.1-q22.1 is associated with a malignant tumor phenotype in salivary gland myoepitheliomas

Genes Chromosomes Cancer. 2009; 48(2):202-212 10.1002/gcc.20631 19009612 no Nexterion Slide E

201 Wang CC, Chen JR, Tseng YC, Hsu CH, Hung YF, Chen SW, Chen CM, Khoo KH, Cheng TJ, Cheng YS, Jan JT, Wu CY, Ma C, Wong CH2009 Glycans on influenza hemagglutinin affect receptor binding and immune response

Proc Natl Acad Sci U S A. 2009; 106(43):18137-18142 10.1073/pnas.0909696106 19822741 no Nexterion Slide H flu vaccine; glycan binding; glycosylation

202 Wang Z 2009 The peptide microarray-based assay for kinase functionality and inhibition study Methods Mol Biol. 2009; 570:329-337 10.1007/978-1-60327-394-7_18 19649604 no Nexterion Slide H MPX-16 kinase; inhibition; peptide array; resonance light scattering (RLS); surface-enhanced Raman scattering (SERS)

203 Webb DP, Hutt DA, Hopkinson N, Conway PP, Palmer PJ2009 Packaging of microfluidic devices for fluid interconnection using thermoplastics J Microelectromech Syst. 2009, 18(2):354-362 10.1109/JMEMS.2009.2013404 yes Nexterion Glass B bonding; fluidics; interconnections; packaging

204 Webster DR, Hekele AG, Lauring AS, Fischer KF, Li H, Andino R, DeRisi JL2009 An enhanced single base extension technique for the analysis of complex viral populations


205 Wei JS, Johansson P, Chen QR, Song YK, Durinck S, Wen X, Cheuk AT, Smith MA, Houghton P, Morton C, Khan J2009 microRNA Profiling Identifies Cancer-Specific and Prognostic Signatures in Pediatric Malignancies

Clin Cancer Res. 2009; 15(17):5560-5568 10.1158/1078-0432.CCR-08-3287 19706822 yes Nexterion Slide E

206 Willis LM, Zhang R, Reid A, Withers SG, Wakarchuk WW2009 Mechanistic investigation of the endo-alpha-N-acetylgalactosaminidase from Streptococcus pneumoniae R6

Biochemistry. 2009; 48(43):10334-10341 10.1021/bi9013825 19788271 no Nexterion Slide H

207 Wingren C, Borrebaeck CA2009 Antibody-based microarrays Methods Mol Biol. 2009; 509:57-84 10.1007/978-1-59745-372-1_5 no Nexterion Slide H antibody microarrays; disease proteomics; disease diagnostics; high-throughput proteomics; nanoarrays; oncoproteomics; protein expression profiling; recombinant antibodies

208 Wong CH, Liang PH2009 Quantitative microarray of intact glycolipid CD1D interaction and correlation with cell-based cytokine production

United States Patent Application 20090275483 US20090275483 yes Nexterion Slide H

209 Xiong H, Callaghan D, Jones A, Bai J, Rasquinha I, Smith C, Pei K, Walker D, Lue L-F, Stanimirovic D, Zhang W2009 ABCG2 is upregulated in Alzheimer's brain with cerebral amyloid angiopathy and may act as a gatekeeper at the blood-brain barrier for Aß1-40 peptides

J Neurosci. 2009; 29(17):5463-5475 10.1523/JNEUROSCI.5103-08.2009 yes Nexterion Slide E

210 Zaugg C, Monod M, Weber J, Harshman K, Pradervand S, Thomas J, Bueno M, Giddey K, Staib P2009 Gene expression profiling in the human pathogenic dermatophyte Trichophyton rubrum during growth on proteins

Eukaryot Cell. 2009, 8(2):241-250 10.1128/EC.00208-08 19098130 yes Nexterion Slide AL

211 Astronomo RD, Lee HK, Scanlan CN, Pantophlet R, Huang CY, Wilson IA, Blixt O, Dwek RA, Wong CH, Burton DR2008 A glycoconjugate antigen based on the recognition motif of a broadly neutralizing human immunodeficiency virus antibody, 2G12, is immunogenic but elicits antibodies unable to bind to the self glycans of gp120

J Virol. 2008; 82(13):6359-6368 10.1128/JVI.00293-08 18434393 yes Nexterion Slide H

212 Baltimore D, O'Connell R, Taganov K, Boldin M2008 MicroRNA inhibition for the treatment of inflammation and myeloproliferative disorders


213 Belser JA, Blixt O, Chen LM, Pappas C, Maines TR, Van Hoeven N, Donis R, Busch J, McBride R, Paulson JC, Katz JM, Tumpey TM.2008 Contemporary North American influenza H7 viruses possess human receptor specificity: Implications for virus transmissibility

Proc Natl Acad Sci U S A. 2008; 105(21):7558-7563 10.1073/pnas.0801259105 18508975 yes Nexterion Slide H hemagglutinin; transmission; receptor binding; animal model

214 Bergamaschi A, Kim YH, Kwei KA, La Choi Y, Bocanegra M, Langerød A, Han W, Noh DY, Huntsman DG, Jeffrey SS, Børresen-Dale AL, Pollack JR2008 CAMK1D amplification implicated in epithelial-mesenchymal transition in basal-like breast cancer

Mol Oncol. 2008; 2(4):327-339 10.1016/j.molonc.2008.09.004 19383354 (yes) Nexterion Slide E breast cancer; genomic profiling; DNA amplification; oncogene; epithelial-mesenchymal transition; EMT

215 Berthet-Duroure N, Leïchlé T, Pourciel JB, Martin C, Bausells J, Lora-Tamayo E, Perez-Murano F, François JM, Trévisiol E, Nicu L2008 Interaction of biomolecules sequentially deposited at the same location using a microcantilever-based spotter

Biomed Microdevices. 2008; 10(4):479-487 10.1007/s10544-007-9156-1 18224445 no Nexterion Slide E microcantilevers; microarray; biomolecules; hybridization; protein interaction

216 Blixt O, Allin K, Bohorov O, Liu X, Andersson-Sand H, Hoffmann J, Razi N2008 Glycan microarrays for screening sialyltransferase specificities Glycoconj J. 2008; 25(1):59-68 10.1007/s10719-007-9062-z 17914671 no Nexterion Slide H carbohydrate; sialyltransferase; specificity; enzyme; glycan array

217 Blixt O, Cristofanilli M, Huflejt ME2008 Detection, prevention and treatment of breast cancer United States Patent Application 20080019968 US20080019968 yes Nexterion Slide H

218 Blixt O, Han S, Liao L, Zeng Y,Hoffmann J, Futakawa S, Paulson JC2008 Sialoside analog arrays for rapid identification of high affinity siglec ligands J Am Chem Soc. 2008; 130(21):6680-6681 10.1021/ja801052g yes Nexterion Slide H

219 Boutte CC, Srinivasan BS, Flannick JA, Novak AF, Martens AT, Batzoglou S, Viollier PH, Crosson S2008 Genetic and computational identification of a conserved bacterial metabolic module

PLoS Genet. 2008; 4(12):e1000310 10.1371/journal.pgen.1000310 19096521 yes Nexterion Slide AL Nexterion Spot

220 Boverhof DR, Burgoon LD, Williams KJ, Zacharewski TR2008 Inhibition of estrogen-mediated uterine gene expression responses by dioxin Mol Pharmacol. 2008; 73(1):82-93 10.1124/mol.107.040451 17942748 yes Nexterion Slide E

221 Chen CS, Korobkova E, Chen H, Zhu J, Jian X, Tao SC, He C, Zhu H2008 A proteome chip approach reveals new DNA damage recognition activities in Escherichia coli

Nat Methods. 2008; 5(1):69-74 10.1038/NMETH1148 18084297 (yes) Nexterion Slide H

222 Croquelois A, Domenighetti AA, Nemir M, Lepore M, Rosenblatt-Velin N, Radtke F, Pedrazzini T2008 Control of the adaptive response of the heart to stress via the Notch1 receptor pathway

J Exp Med. 2008; 205(13):3173-3185 10.1084/jem.20081427 19064701 yes Nexterion Slide AL

223 de Boer AR, Hokke CH, Deelder AM, Wuhrer M2008 Serum antibody screening by surface plasmon resonance using a natural glycan microarray

Glycoconj J. 2008; 25(1):75-84 10.1007/s10719-007-9100-x 18193481 no Nexterion Spot carbohydrate-binding protein detection; glycan microarray; natural glycans; serum screening; surface plasmon resonance

224 Di Luca A, Hamill R, Davey G, McGee C, Talbot A, Elia G, Sweeney T, Cairns M, Mullen A2008 Uncovering the genomic and proteomic basis for variation in Irish pork quality ICOMST 54. 2008; Session 4 Paper 4.5 link yes Nexterion Slide E

225 Douglas SE, Knickle LC, Williams J, Flight RM, Reith ME2008 A first generation atlantic halibut Hippoglossus hippoglossus (L.) microarray: application to developmental studies

J Fish Biol. 2008; 72(9):2391-2406 10.1111/j.1095-8649.2008.01861.x no Nexterion Slide E Nexterion Spot, Nexterion Block E

development; halibut; larva; metamorphosis; microarray; oligonucleotide

226 Ederth T, Nygren P, Pettitt ME, Ostblom M, Du CX, Broo K, Callow ME, Callow J, Liedberg B2008 Anomalous settlement behavior of Ulva linza zoospores on cationic oligopeptide surfaces

Biofouling. 2008; 24(4):303-312 10.1080/08927010802192650 18589494 no Nexterion Glass B fouling; algae; self-assembled monolayers; cationic peptides; Ulva; spore

227 Ederth T, Pettitt ME, Nygren P, Du CX, Ekblad T, Zhou Y, Falk M, Callow ME, Callow JA, Liedberg B2008 Interactions of zoospores of Ulva linza with arginine-rich oligopeptide monolayers

Langmuir. 2009; 25(16):9375-9383 10.1021/la900688g 19719228 no Nexterion Glass B (cleanroom cleaned)

228 Ekblad T, Bergström G, Ederth T, Conlan SL, Mutton R, Clare AS, Wang S, Liu Y, Zhao Q, D'Souza F, Donnelly GT, Willemsen PR, Pettitt ME, Callow ME, Callow JA, Liedberg B2008 Poly(ethylene glycol)-containing hydrogel surfaces for antifouling applications in marine and freshwater environments

Biomacromolecules. 2008; 9(10):2775-2783 10.1021/bm800547m 18759475 no Nexterion Glass B, cleanroom cleaned

229 Erfurth F, Tretyakov A, Nyuyki B, Mrotzek G, Schmidt WD, Fassler D, Saluz HP2008 Two-laser, large-field hyperspectral microarray scanner for the analysis of multicolor microarrays

Anal Chem. 2008; 80(20):7706-7713 10.1021/ac801014m 18808153 no Nexterion Slide E

230 Feunou PF, Ismaili J, Debrie AS, Huot L, Hot D, Raze D, Lemoine Y, Locht C2008 Genetic stability of the live attenuated Bordetella pertussis vaccine candidate BPZE1

Vaccine. 2008; 26(45):5722-5727 10.1016/j.vaccine.2008.08.018 18762220 no Nexterion Slide AL live attenuated vaccine; pertussis; genetic stability

231 Fouquaert E, Peumans WJ, Smith DF, Proost P, Savvides SN, Van Damme EJ2008 The "old" Euonymus europaeus agglutinin represents a novel family of ubiquitous plant proteins

Plant Physiol. 2008; 147(3):1316-1324 10.1104/pp.108.116764 18451263 yes Nexterion Slide H

232 Gadermaier G, Wopfner N, Wallner M, Egger M, Didierlaurent A, Regl G, Aberger F, Lang R, Ferreira F, Hawranek T2008 Array-based profiling of ragweed and mugwort pollen allergens Allergy. 2008; 63(11):1543-1549 10.1111/j.1398-9995.2008.01780.x 18925891 no Nexterion Slide H allergen microarray; molecule-based allergy diagnosis; mugwort; ragweed

233 Geiss GK, Bumgarner RE, Birditt B, Dahl T, Dowidar N, Dunaway DL, Fell HP, Ferree S, George RD, Grogan T, James JJ, Maysuria M, Mitton JD, Oliveri P, Osborn JL, Peng T, Ratcliffe AL, Webster PJ, Davidson EH, Hood L, Dimitrov K2008 Direct multiplexed measurement of gene expression with color-coded probe pairs

Nat Biotechnol. 2008; 26(3):317-325 10.1038/nbt1385 18278033 (no) Nexterion custom coated coverslip

234 Gescher C, Metfies K, Frickenhaus S, Knefelkamp B, Wiltshire KH, Medlin LK2008 Feasibility of assessing the community composition of prasinophytes at the Helgoland Roads sampling site with a DNA microarray

Appl Environ Microbiol. 2008; 74(17):5305-5316 10.1128/AEM.01271-08 18621863 yes Nexterion Slide E

235 Gescher C, Metfiesa K, Medlin LK2008 The ALEX CHIP - Development of a DNA chip for identification and monitoring of Alexandrium

Harmful Algae. 2008, 7(4)#485-494 10.1016/j.hal.2007.11.001 no Nexterion Slide E Alexandrium; DNA microarray; hybridization; molecular probes; paralytic shellfish poisoning (PSP)

236 Glaser V 2008 Protein microarray uses abound Genetic Engineering & Biotechnol News. 2008; 28(6) link yes Nexterion Slide H, Nexterion Slide NC

237 Gotliv BA, Daube SS, Naaman R2008 Enhancement of reaction specificity at interfaces J Phys Chem B. 2008; 112(13):3948-3954 10.1021/jp711441q 18335924 no Nexterion Slide E238 Graindorge A, Le Tonquèze O, Thuret R, Pollet N, Osborne HB, Audic Y2008 Identification of CUG-BP1/EDEN-BP target mRNAs in Xenopus tropicalis Nucleic Acids Res. 2008; 36(6):1861-1870 10.1093/nar/gkn031 18267972 yes Nexterion Slide E

239 Haake C, Stahl F, Walter JG, Reck M, Scheper T2008 Comprehensive comparison of protein microarray supports using different spotting systems

Poster (P21) presented at 10 Jahre Statusseminar Chiptechnologien 31. January 2008, DECHEMA-Haus, Frankfurt am Main link yes Nexterion Slide NC Nexterion Spot PB

240 Harrington CR, Lucchini S, Ridgway KP, Wegmann U, Eaton TJ, Hinton JC, Gasson MJ, Narbad A2008 A short-oligonucleotide microarray that allows improved detection of gastrointestinal tract microbial communities

BMC Microbiol. 2008; 8:195 10.1186/1471-2180-8-195 19014434 yes Nexterion Slide E Nexterion Spot modified

241 Hendrickson DG, Hogan DJ, Herschlag D, Ferrell JE, Brown PO2008 Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance

PLoS One. 2008; 3(5):e2126 10.1371/journal.pone.0002126 18461144 yes Nexterion Slide A, Nexterion Slide E

242 Hsu KL, Gildersleeve JC, Mahal LK2008 A simple strategy for the creation of a recombinant lectin microarray Mol Biosyst. 2008; 4(6):654-662 10.1039/b800725j 18493664 no Nexterion Slide H

243 Hultman J, Ritari J, Romantschuk M, Paulin L, Auvinen P2008 Universal ligation-detection-reaction microarray applied for compost microbes BMC Microbiol. 2008; 8:237 10.1186/1471-2180-8-237 19116002 yes Nexterion Slide A, Nexterion Slide A+, Nexterion Slide E

Nexterion Spot, Nexterion Spot modified, LEB I, LEB II, LEB II

244 Imberty A, Chabre YM, Roy R2008 Glycomimetics and glycodendrimers as high affinity microbial anti-adhesins Chemistry. 2008; 14(25):7490-7499 10.1002/chem.200800700 18618537 no Nexterion Slide H adhesin; antiviral agents; dendrimers; glycomimetics; lectins

245 Iqbal J, Hanel F, Ruryk A, Limmon GV, Tretiakov A, Durst M, Saluz HP2008 Fabrication and evaluation of a sequence-specific oligonucleotide miniarray for molecular genotyping

Indian J Med Microbiol. 2008; 26(1):13-20 10.4103/0255-0857.38851 18227591 yes Nexterion Glass B DNA microarray; genotyping; type-specific oligonucleotide hybridization

246 Janssen BJ, Thodey K, Schaffer RJ, Alba R, Balakrishnan L, Bishop R, Bowen JH, Crowhurst RN, Gleave AP, Ledger S, McArtney S, Pichler FB, Snowden KC, Ward S2008 Global gene expression analysis of apple fruit development from the floral bud to ripe fruit

BMC Plant Biol. 2008; 8:16 10.1186/1471-2229-8-16 18279528 yes Nexterion Slide E

247 Kim YP, Oh YH, Oh E, Ko S, Han MK, Kim HS.2008 Energy transfer-based multiplexed assay of proteases by using gold nanoparticle and quantum dot conjugates on a surface

Anal Chem. 2008; 80(12):4634-4641 10.1021/ac702416e 18457412 yes Nexterion Slide H

248 Kim YP, Park S, Oh E, Oh YH, Kim HS2008 Chip-based energy transfer system between quantum dots and gold nanoparticles for analysis of protein glycosylation

NSTI-Nanotech. 2008, conference report link yes Nexterion Slide H Galanthus nivalis agglutinin; glycan array; cytoplasmic homolog; human immunodeficiency virus; agglutination; lectin

249 Kiyosawa N, Kwekel JC, Burgoon LD, Williams KJ, Tashiro C, Chittim B, Zacharewski TR2008 o,p'-DDT elicits PXR/CAR-, not ER-, mediated responses in the immature ovariectomized rat liver

Toxicol Sci. 2008; 101(2):350-363 10.1093/toxsci/kfm275 17984292 yes Nexterion Slide E DDT; liver; microarray; CAR; carcinogenesis;estrogen

250 Koncarevic S, Urig S, Steiner K, Rahlfs S, Herold-Mende C, Sueltmann H, Becker K2008 Differential genomic and proteomic profiling of glioblastoma cells exposed to terpyridineplatinum(II) complexes

Free Radic Biol Med. 2009; 46(8):1096-1108 10.1016/j.freeradbiomed.2009.01.013 19439228 no Nexterion Slide E glioblastoma; proteomics; microarray; platinum complexes; thioredoxin reductase; free radicals

251 Kopec AK, Boverhof DR, Burgoon LD, Ibrahim-Aibo D, Harkema JR, Tashiro C, Chittim B, Zacharewski TR2008 Comparative toxicogenomic examination of the hepatic effects of PCB126 and TCDD in immature, ovariectomized C57BL/6 mice

Toxicol Sci. 2008; 102(1):61-75 10.1093/toxsci/kfm289 18042819 yes Nexterion Slide E PCB126; TCDD; TEF; liver; mouse;toxicogenomics

252 Krarup A, Mitchell DA, Sim RB2008 Recognition of acetylated oligosaccharides by human L-ficolin Immunol Lett. 2008; 118(2):152-156 10.1016/j.imlet.2008.03.014 18486240 no Nexterion Slide H complement; the lectin pathway; L-Ficolin specificity; recognition of oligosaccharides

253 Kumar RA, KaraMohamed S, Sudi J, Conrad DF, Brune C, Badner JA, Gilliam TC, Nowak NJ, Cook EH Jr, Dobyns WB, Christian SL2008 Recurrent 16p11.2 microdeletions in autism Hum Mol Genet. 2008; 17(4):628-638 10.1093/hmg/ddm376 18156158 yes Nexterion Slide A+254 Kyselková M, Kopecký J, Felföldi T, Cermák L, Omelka M, Grundmann GL, Moënne-Loccoz Y, Ságová-Marecková M2008 Development of a 16S rRNA gene-based prototype microarray for the detection

of selected actinomycetes generaA Van Leeuw J Microb. 2008; 94(3):439-453 10.1007/s10482-008-9261-z 18600470 no Nexterion Slide AL Actinomycete diversity; cloning

soil communities; taxonomic microarray

255 Lameignere E, Malinovská L, Sláviková M, Duchaud E, Mitchell EP, Varrot A, Sedo O, Imberty A, Wimmerová M2008 Structural basis for mannose recognition by a lectin from opportunistic bacteria Burkholderia cenocepacia

Biochem J. 2008; 411(2):307-318 10.1042/BJ20071276 18215132 (yes) Nexterion Slide H bacterial lectin; Burkholderia cenocepacia; Pseudomonas aeruginosa; Burkholderia cepacia complex

256 Le Meur J, Menut D, Wodling P, Salmon, Throc PY, Chevillard S, Ugolin N2008 First improvements in the detection and quantification of label-free nucleic acids by laser-induced breakdown spectroscopy: Application to the deoxyribonucleic acid micro-array technology

Spectrochim Acta B Atomic Spectrosc. 2008; 63(4):465-473 10.1016/j.sab.2007.12.011 no Nexterion Slide E LIBS; nucleic acid; micro-array; phosphorus; statistical analysis

257 Leberre V, Baranowski E, Deplanche M, Trouilh L, François JM2008 Detection of minority variants within bovine respiratory syncytial virus populations using oligonucleotide-based microarrays

J Virol Methods. 2008;148(1-2):271-276 10.1016/j.jviromet.2007.10.026 18096250 no Nexterion HiSens E Nexterion Spot, Nexterion MPX-16 Superstructures

oligo-microarrays; BRSV; discrimination

258 Liang PH, Imamura M, Li X, Wu D, Fujio M, Guy RT, Wu BC, Tsuji M, Wong CH2008 Quantitative microarray analysis of intact glycolipid-CD1d interaction and correlation with cell-based cytokine production

J Am Chem Soc. 2008; 130(37):12348-12354 10.1021/ja8012787 18712867 no Nexterion Slide H

259 Litovkin KV, Ivanova OV, Bauer A, Hoheisel JD, Bubnov VV, Zaporozhan VN2008 Microarray study of gene expression in uterine leiomyoma Exp Oncol. 2008; 30(2):106-111 link 18566572 yes Nexterion Slide E microarray; gene expression; uterine leiomyoma

260 Lo KC, Stein LC, Panzarella JA, Cowell JK, Hawthorn L2008 Identification of genes involved in squamous cell carcinoma of the lung using synchronized data from DNA copy number and transcript expression profiling analysis

Lung Cancer. 2008; 59(3):315-331 10.1016/j.lungcan.2007.08.037 18029052 no Nexterion Slide A squamous cell carcinoma; array CGH; gene expression analysis; data overlay; GO; pathway analysis

261 Luppens SB, Kara D, Bandounas L, Jonker MJ, Wittink FR, Bruning O, Breit TM, Ten Cate JM, Crielaard W2008 Effect of Veillonella parvula on the antimicrobial resistance and gene expression of Streptococcus mutans grown in a dual-species biofilm

Oral Microbiol Immunol. 2008; 23(3):183-189 10.1111/j.1399-302X.2007.00409.x 18402603 no Nexterion Slide E biofilm; resistance; species interaction

262 Marino V, Galati C, Arnone C2008 Optimization of fluorescence enhancement for silicon-based microarrays J Biomed Opt. 2008; 13(5):054060 10.1117/1.2992142 19021439 no Nexterion HiSens E fluorescence enhancement; interference; microarray; aluminiumsilicon-copper alloy; µTAS

263 Mehne J, Markovic G, Pröll F, Schweizer N, Zorn S, Schreiber F, Gauglitz G2008 Characterisation of morphology of self-assembled PEG monolayers: a comparison of mixed and pure coatings optimised for biosensor applications

Anal Bioanal Chem. 2008; 391(5):1783-1791 10.1007/s00216-008-2066-0 18425500 (no) Nexterion Glass D (special anorganic coating)

surface chemistry; poly(ethylene glycol); reflectometric interference spectroscopy (RIfS); ellipsometry; biosensor; atomic force microscopy (AFM); polarisation modulation infrared reflection absorption spectroscopy (PM-IRRAS)

264 Mir M, Alvarez M, Azzaroni O, Knoll W2008 Comparison of different supramolecular architectures for oligonucleotide biosensing

Langmuir. 2008; 24(22):13001-13006 10.1021/la802228e 18947242 no Nexterion Slide H-S (discontinued)

265 Morfill J, Neumann J, Blank K, Steinbach U, Puchner EM, Gottschalk KE, Gaub HE2008 Force-based analysis of multidimensional energy landscapes: application of dynamic force spectroscopy and steered molecular dynamics simulations to an antibody fragment-peptide complex

J Mol Biol. 2008; 381(5):1253-1266 10.1016/j.jmb.2008.06.065 18619976 no Nexterion Slide A single molecule force spectroscopy; atomic force microscope; molecular dynamics simulations; energy landscape; antibody-antigen interaction

266 Nadler TK, Rauh-Adelmann C, Murphy C, Hall AB, Graham JR, Yen L, Gordon NF, Radding JA2008 Profiling protein tyrosine phosphorylation: a quantitative 45-plex peptide-based immunoassay

J Biomol Screen. 2008; 13(7):626-637 10.1177/1087057108319978 18626117 no Nexterion Slide H tyrosine phosphorylation; signal transduction; antibody microarray; molecular profiling

267 Nath N, Hurst R, Hook B, Meisenheimer P, Zhao KQ, Nassif N, Bulleit RF, Storts DR2008 Improving protein array performance: focus on washing and storage conditions J Proteome Res. 2008; 7(10):4475-4482 10.1021/pr800323j 18774839 no Nexterion Slide H protein array; HaloTag; protein-protein interaction; protein stability; wheat germ cell free expression

268 N'Jai A, Boverhof DR, Dere E, Burgoon LD, Tan YS, Rowlands JC, Budinsky RA, Stebbins KE, Zacharewski TR2008 Comparative temporal toxicogenomic analysis of TCDD- and TCDF-mediated hepatic effects in immature female C57BL/6 mice

Toxicol Sci. 2008; 103(2):285-297 10.1093/toxsci/kfn053 18343893 yes Nexterion Slide E TCDD; TCDF; microarray; liver; mouse; temporal

269 Nodop A, Pietsch D, Höcker R, Becker A, Pistorius EK, Forchhammer K, Michel KP2008 Transcript profiling reveals new insights into the acclimation of the mesophilic fresh-water cyanobacterium Synechococcus elongatus PCC 7942 to iron starvation

Plant Physiol. 2008; 147(2):747-763 10.1104/pp.107.114058 18424627 yes Nexterion Slide E Nexterion Block E

270 Poole RL, Barker GL, Werner K, Biggi GF, Coghill J, Gibbings JG, Berry S, Dunwell JM, Edwards KJ2008 Analysis of wheat SAGE tags reveals evidence for widespread antisense transcription

BMC Genomics. 2008; 9:475 10.1186/1471-2164-9-475 18847483 yes Nexterion Slide E Nexterion Spot

271 Ramachandran N, Anderson KS, Raphael JV, Hainsworth E, Sibani S, Montor WR, Pacek M, Wong J, Eljanne M, Sanda MG, Hu Y, Logvinenko T, LaBaer J2008 Tracking humoral responses using self assembling protein microarrays Prot. Clin. Appl. 2008; 2(10-11):1518-1527 10.1002/prca.200800034 no Nexterion Slide H biomarkers; functional proteomics; high-throughput; immunoassay; proteinmicroarray

272 Rayapuram C, Wu J, Haas C, Baldwin IT2008 PR-13/Thionin but not PR-1 mediates bacterial resistance in Nicotiana attenuata in nature, and neither influences herbivore resistance

Mol Plant Microbe Interact. 2008; 21(7):988-1000 10.1094/MPMI -21-7-0988 18533839 yes Nexterion Slide E

273 Rosenfeld N, Aharonov R, Meiri E, Rosenwald S, Spector Y, Zepeniuk M, Benjamin H, Shabes N, Tabak S, Levy A, Lebanony D, Goren Y, Silberschein E, Targan N, Ben-Ari A, Gilad S, Sion-Vardy N, Tobar A, Feinmesser M, Kharenko O, Nativ O, Nass D, Perelman M, Yosepovich A, Shalmon B, Polak-Charcon S, Fridman E, Avniel A, Bentwich I, Bentwich Z, Cohen D, Chajut A, Barshack I2008 MicroRNAs accurately identify cancer tissue origin Nat Biotechnol. 2008; 26(4):462-469 10.1038/nbt1392 18362881 no Nexterion Slide E274 Rossi MR, Laduca J, Cowell JK, Srivastava BI, Matsui S2008 Genomic analysis of CD8+ NK/T cell line, 'SRIK-NKL', with array-based CGH

(aCGH), SKY/FISH and molecular mappingLeuk Res. 2008;32(3):455-463 10.1016/j.leukres.2007.04.019 17640729 no Nexterion Slide A SKY/FISH; CD8+NK/T; genomic

analysis; aCGH

275 Rubina AY, Kolchinsky A, Makarov AA, Zasedatelev AS2008 Why 3-D? Gel-based microarrays in proteomics Proteomics. 2008; 8(4):817-831 10.1002/pmic.200700629 18214844 no Nexterion Slide H biochips; DNA–protein recognition; glycan arrays; hydrogel; prostate-specific antigen; protein arrays

276 Ruckdeschel EA, Kirkham C, Lesse AJ, Hu Z, Murphy TF2008 Mining the Moraxella catarrhalis genome: identification of potential vaccine antigens expressed during human infection

Infect Immun. 2008 Apr;76(4):1599-1607 10.1128/IAI.01253-07 18227159 yes Nexterion Slide A

277 Schanné M, Bodem J, Gerhold-Ay A, Jacob A, Fellenberg K, Kräusslich HG, Hoheisel JD2008 Genotypic resistance testing in HIV by arrayed primer extension Anal Bioanal Chem. 2008; 391(5):1661-1669 10.1007/s00216-007-1775-0 18202840 yes Nexterion Slide E arrayed primer extension (APEX); oligonucleotide microarray; human immunodeficiency virus (HIV); genotypic drug resistance testing

278 Schmidt AM, Sahota R, Pope DS, Lawrence TS, Belton MP, Rott ME.2008 Detection of genetically modified canola using multiplex PCR coupled with oligonucleotide microarray hybridization

J Agric Food Chem. 2008;56(16):6791-6800 10.1021/jf800137q 18636685 no Nexterion Slide A+ canola; Brassica napus; genetically modified; multiplex PCR; oligonucleotide microarray

279 Scholler N, Gross JA, Garvik B, Wells L, Liu Y, Loch CM, Ramirez AB, McIntosh MW, Lampe PD, Urban N2008 Use of cancer-specific yeast-secreted in vivo biotinylated recombinant antibodies for serum biomarker discovery

J Transl Med. 2008; 6:41 10.1186/1479-5876-6-41 18652693 yes Nexterion Slide H

280 Schriek S, Aguirre-von-Wobeser E, Nodop A, Becker A, Ibelings BW, Bok J, Staiger D, Matthijs HC, Pistorius EK, Michel KP2008 Transcript profiling indicates that the absence of PsbO affects the coordination of C and N metabolism in Synechocystis sp. PCC 6803

Physiol Plant. 2008; 133(3):525-543 10.1111/j.1399-3054.2008.01119.x 18419737 no Nexterion Slide E

281 Sebkova A, Karasova D, Crhanova M, Budinska E, Rychlik I2008 aro mutations in Salmonella enterica cause defects in cell wall and outer membrane integrity

J Bacteriol. 2008; 190(9):3155-3160 10.1128/JB.00053-08 18310348 yes Nexterion Slide E Nexterion 70mer Oligo Microarraying Kit

282 Seo YS, Sriariyanun M, Wang L, Pfeiff J, Phetsom J, Lin Y, Jung KH, Chou HH, Bogdanove A, Ronald P2008 A two-genome microarray for the rice pathogens Xanthomonas oryzae pv. oryzae and X. oryzae pv. oryzicola and its use in the discovery of a difference in their regulation of hrp genes

BMC Microbiol. 2008; 8:99 10.1186/1471-2180-8-99 18564427 yes Nexterion Slide A or A+ Nexterion Spot

283 Serrania J, Vorhölter FJ, Niehaus K, Pühler A, Becker A2008 Identification of Xanthomonas campestris pv. campestris galactose utilization genes from transcriptome data

J Biotechnol. 2008; 135(3):309-317 10.1016/j.jbiotec.2008.04.011 18538881 no Nexterion Slide E Nexterion Block E galactose metabolism; differential gene expression; transcriptome

284 Shi L, Perkins RG, Tong W2008 The current status of DNA microarrays Integrated Analytical Systems. 2008; 3-24 10.1007/978-0-387-72719-6_1 no Nexterion Slide E Nexterion Block E DNA microarray; fabrication; gene expression; microarray experimental process; reproducibility; data analysis; clinical applications; regulatory decision-making

285 Simon AK, Newsom-Davis T, Frayne ME, Ch'en PF, McMichael AJ, Screaton GR2008 Generation of tumour-rejecting anti-carbohydrate monoclonal antibodies using melanoma modified with Fas ligand

Int Immunol. 2008; 20(4):525-534 10.1093/intimm/dxn011 18310066 yes Nexterion Slide H carbohydrates; CD95 ligand; GM4; tolerance; tumour immunity

286 Steiner AJ, Stütz AE, Wrodnigg TM, Tarling CA, Withers SG, Hermetter A, Schmidinger H2008 Glycosidase profiling with immobilised glycosidase-inhibiting iminoalditols--a proof-of-concept study

Bioorg Med Chem Lett. 2008; 18(6):1922-1925 10.1016/j.bmcl.2008.01.124 18281216 no Nexterion Slide E iminoalditol; iminosugar chip; immobilisation; glycosidaseinhibitor

287 Sticht C, Freier K, Knöpfle K, Flechtenmacher C, Pungs S, Hofele C, Hahn M, Joos S, Lichter P2008 Activation of MAP kinase signaling through ERK5 but not ERK1 expression is associated with lymph node metastases in oral squamous cell carcinoma (OSCC)

Neoplasia. 2008;10(5):462-470 10.1593/neo.08164 18472963 yes Nexterion Slide E

288 Takahashi H, Emoto K, Dubey M, Castner DG, Grainger DW2008 Imaging surface immobilization chemistry: Correlation with cell patterning on non-adhesive hydrogel thin films

Adv Funct Mater. 2008; 18(14):2079-2088 10.1002/adfm.200800105 no Nexterion Glass D

289 Tao SC, Li Y, Zhou J, Qian J, Schnaar RL, Zhang Y, Goldstein IJ, Zhu H, Schneck JP2008 Lectin microarrays identify cell-specific and functionally significant cell surface glycan markers

Glycobiology. 2008; 18(10):761-769 10.1093/glycob/cwn063 18625848 yes Nexterion Slide H biomaker; cell differentiation; glycan signature; lectin microarray; pathogen tropism

290 Tateno H, Mori A, Uchiyama N, Yabe R, Iwaki J, Shikanai T, Angata T, Narimatsu H, Hirabayashi J2008 Glycoconjugate microarray based on an evanescent-field fluorescence-assisted detection principle for investigation of glycan-binding proteins

Glycobiology. 2008; 18(10):789-798 10.1093/glycob/cwn068 18633134 yes Nexterion Slide E evanescent; glycoconjugate; lectin; microarray; specificity

291 Taussig MA, He M#2008 Repeatable Protein Arrays United States Patent Application 20080293591 US20080293591 yes Nexterion Slide E, Nexterion Slide H

292 Tian Z, Greene AS, Pietrusz JL, Matus IR, Liang M2008 MicroRNA-target pairs in the rat kidney identified by microRNA microarray, proteomic, and bioinformatic analysis

Genome Res.; 18(3):404-411 10.1101/gr.6587008 18230805 yes Nexterion Slide E Nexterion Spot

293 Tsai CM, Chiu YK, Hsu TL, Lin IY, Hsieh SL, Lin KI2008 Galectin-1 promotes immunoglobulin production during plasma cell differentiation

J Immunol. 2008; 181(7):4570-4579 link 18802059 yes Nexterion Slide H

294 Tschuch C, Schulz A, Pscherer A, Werft W, Benner A, Hotz-Wagenblatt A, Barrionuevo LS, Lichter P, Mertens D2008 Off-target effects of siRNA specific for GFP BMC Mol Biol. 2008; 9:60 10.1186/1471-2199-9-60 18577207 yes Nexterion Slide E295 Tseng SY, Wang CC, Lin CW, Chen CL, Yu WY, Chen CH, Wu CY, Wong CH2008 Glycan arrays on aluminum-coated glass slides Chem Asian J. 2008; 3(8-9):1395-1405 10.1002/asia.200800154 18683161 no Nexterion Slide H fluorescent probes; glycan arrays; mass

spectrometry; microarrays; protein binding

296 Valverde C, Livny J, Schlüter JP, Reinkensmeier J, Becker A, Parisi G2008 Prediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011

BMC Genomics. 2008; 9:416 10.1186/1471-2164-9-416 18793445 yes Nexterion Slide E

297 van Hoek AHAM, Aarts HJM2008 Microarray-based detection of antibiotic resistance genes in Salmonella Food Anal Methods. 2008; 1(2):95-108 10.1007/s12161-007-9012-1 no Nexterion Slide E antibiotic resistance; microarray; oligonucleotides; salmonella; serovars; typhimurium

298 Wang CC, Huang YL, Ren CT, Lin CW, Hung JT, Yu JC, Yu AL, Wu CY, Wong CH2008 Glycan microarray of Globo H and related structures for quantitative analysis of breast cancer

Proc Natl Acad Sci U S A. 2008; 105(33):11661-11666 10.1073/pnas.0804923105 18689688 yes Nexterion Slide H array; diagnosis

299 Wang SK, Liang PH, Astronomo RD, Hsu TL, Hsieh SL, Burton DR, Wong CH2008 Targeting the carbohydrates on HIV-1: Interaction of oligomannose dendrons with human monoclonal antibody 2G12 and DC-SIGN

Proc Natl Acad Sci U S A. 2008; 105(10):3690-3695 10.1073/pnas.0712326105 18310320 yes Nexterion Slide H glycodendron; high mannose; multivalency; HIV vaccine; antiviral agent

300 Wei CJ, Xu L, Kong WP, Shi W, Canis K, Stevens J, Yang ZY, Dell A, Haslam SM, Wilson IA, Nabel GJ2008 Comparative efficacy of neutralizing antibodies elicited by recombinant hemagglutinin proteins from avian H5N1 influenza virus


301 Wilson R 2008 The use of gold nanoparticles in diagnostics and detection Chem Soc Rev. 2008; 37(9):2028-2045 10.1039/b712179m 18762845 no Nexterion Slide H, Nexterion Slide NC

302 Wingren C, Borrebaeck CAK2008 Protein microarray technologies for detection and identification of receptors and microsystems

Principles of Bacterial Detection: Biosensors, Recognition Receptors and Microsystems. 2008; 715-72910.1007/978-0-387-75113-9_26 no Nexterion Slide E, Nexterion Slide H

303 Wong LS, Thirlway J, Micklefield J2008 Direct site-selective covalent protein immobilization catalyzed by a phosphopantetheinyl transferase

J Am Chem Soc. 2008; 130(37):12456-12464 10.1021/ja8030278 18722432 no Nexterion Slide H

304 Zientek-Targosz H, Kunnev D, Hawthorn L, Venkov M, Matsui S, Cheney RT, Ionov Y2008 Transformation of MCF-10A cells by random mutagenesis with frameshift mutagen ICR191: a model for identifying candidate breast-tumor suppressors

Mol Cancer. 2008;7:51 10.1186/1476-4598-7-51 18534021 yes Nexterion Slide A

305 Zupancic ML, Frieman M, Smith D, Alvarez RA, Cummings RD, Cormack BP2008 Glycan microarray analysis of Candida glabrata adhesin ligand specificity Mol Microbiol. 2008; 68(3):547-559 10.1111/j.1365-2958.2008.06184.x 18394144 yes Nexterion Slide H

306 Abal M, Obrador-Hevia A, Janssen KP, Casadome L, Menendez M, Carpentier S, Barillot E, Wagner M, Ansorge W, Moeslein G, Fsihi H, Bezrookove V, Reventos J, Louvard D, Capella G, Robine S2007 APC inactivation associates with abnormal mitosis completion and concomitant BUB1B/MAD2L1 up-regulation

Gastroenterology. 2007; 132(7):2448-2458 10.1053/j.gastro.2007.03.027 17570218 (no) Nexterion Slide E

307 Alonso A, Fritz B, Hasson D, Abrusan G, Cheung F, Yoda K, Radlwimmer B, Ladurner AG, Warburton PE2007 Co-localization of CENP-C and CENP-H to discontinuous domains of CENP-A chromatin at human neocentromeres

Genome Biol. 2007; 8(7):R148 10.1186/gb-2007-8-7-r148 17651496 yes Nexterion Slide E

308 Ametzazurra A, Nagore Daniel, Martínez Martínez A, Simón BL2007 Detection of endometrial secretion markers for assesment of endometriosis European Patent Application EP2065707 EP2065707 yes Nexterion Slide MPX-16

309 Amonsen M, Smith DF, Cummings RD, Air GM2007 Human parainfluenza viruses hPIV1 and hPIV3 bind oligosaccharides with alpha2-3-linked sialic acids that are distinct from those bound by H5 avian influenza virus hemagglutinin


310 Antwerpen MH, Schellhase M, Ehrentreich-Förster E, Bier F, Witte W, Nübel U2007 DNA microarray for detection of antibiotic resistance determinants in Bacillus anthracis and closely related Bacillus cereus

Mol Cell Probes. 2007; 21(2):152-160 10.1016/j.mcp.2006.10.002 17118627 no Nexterion Slide A+ diagnostic microarray; Bacillus anthracis; Bacillus cereus; ATCC 10987; antibiotic resistance; ciprofloxacin; doxycycline; rifampin;vancomycin

311 Auer H, Newsom DL, Nowak NJ, McHugh KM, Singh S, Yu CY, Yang Y, Wenger GD, Gastier-Foster JM, Kornacker K2007 Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays

BMC Genomics. 2007; 8:111 10.1186/1471-2164-8-111 17470268 yes Nexterion Slide A+

312 Ballif BC, Hornor SA, Sulpizio SG, Lloyd RM, Minier SL, Rorem EA, Theisen A, Bejjani BA, Shaffer LG2007 Development of a high-density pericentromeric region BAC clone set for the detection and characterization of small supernumerary marker chromosomes by array CGH

Genet Med. 2007; 9(3):150-162 10.1097/GIM.0b013e3180312087 17413419 no Nexterion Glass B or D

313 Beisel C, Buness A, Roustan-Espinosa IM, Koch B, Schmitt S, Haas SA, Hild M, Katsuyama T, Paro R2007 Comparing active and repressed expression states of genes controlled by the Polycomb/Trithorax group proteins

Proc Natl Acad Sci U S A. 2007; 104(42):16615-16620 10.1073/pnas.0701538104 17921257 yes Nexterion Slide E antennapedia; bithorax; chromatin; gene regulation; HOX

314 Blixt O 2007 Multi-functional spacer for glycans United States Patent Application 20070281865 US20070281865 yes Nexterion Slide H315 Blixt O, Huflejt ME, Cristofanilli M2007 Detection, prevention and treatment of ovarian cancer United States Patent Application 20070265170 US20070265170 yes Nexterion Slide H316 Borrebaeck CA, Wingren C2007 High-throughput proteomics using antibody microarrays: an update Expert Rev Mol Diagn. 2007; 7(5):673-686 10.1586/14737159.7.5.673 17892372 no Nexterion Slide H affinity proteomics; antibody

microarrays; disease proteomics; nanoarrays; oncoproteomics; protein array; proteomics; recombinant antibody microarray

317 Campbell EL, Summers ML, Christman H, Martin ME, Meeks JC2007 Global gene expression patterns of Nostoc punctiforme in steady-state dinitrogen-grown heterocyst-containing cultures and at single time points during the differentiation of akinetes and hormogonia

J Bacteriol. 2007; 189(14):5247-5256 10.1128/JB.00360-07 17483217 yes Nexterion Slide A+

318 Carlsson S, Oberg CT, Carlsson MC, Sundin A, Nilsson UJ, Smith D, Cummings RD, Almkvist J, Karlsson A, Leffler H2007 Affinity of galectin-8 and its carbohydrate recognition domains for ligands in solution and at the cell surface

Glycobiology. 2007; 17(6):663-676 10.1093/glycob/cwm026 17339281 yes Nexterion Slide H affinity; cell surface; galectin; sialic acid; specificity

319 Chen S, Wilson DB 2007 Proteomic and transcriptomic analysis of extracellular proteins and mRNA levels in Thermobifida fusca grown on cellobiose and glucose

J Bacteriol. 2007; 189(17):6260-6265 10.1128/JB.00584-07 17601791 yes Nexterion Slide E Nexterion Block E

320 Colangeli R, Helb D, Vilchèze C, Hazbón MH, Lee CG, Safi H, Sayers B, Sardone I, Jones MB, Fleischmann RD, Peterson SN, Jacobs WR Jr, Alland D2007 Transcriptional regulation of multi-drug tolerance and antibiotic-induced responses by the histone-like protein Lsr2 in M. tuberculosis

PLoS Pathog. 2007; 3(6):e87 10.1371/journal.ppat.0030087 17590082 yes Nexterion Slide A

321 de Boer AR, Hokke CH, Deelder AM, Wuhrer M2007 General microarray technique for immobilization and screening of natural glycans

Anal Chem. 2007; 79(21):8107-8013 10.1021/ac071187g 17922555 no Nexterion Slide E Nexterion Spot

322 Derwinska K, Gheber LA, Preininger C2007 A comparative analysis of polyurethane hydrogel for immobilization of IgG on chips

Anal Chim Acta. 2007 592(2):132-138 10.1016/j.aca.2007.04.019 17512817 no Nexterion Slide H protein microarray; polyurethane; print buffer; antibody immobilization

323 Derwinska K, Gheber LA, Sauer U, Schorn L, Preininger C2007 Effect of surface parameters on the performance of IgG-arrayed hydrogel chips: a comprehensive study

Langmuir. 2007 23(21):10551-10558 10.1021/la700608c 17803320 no Nexterion Slide H

324 Deviren G, Gupta K, Paulaitis ME, Schneck JP2007 Detection of antigen-specific T cells on p/MHC microarrays J Mol Recognit. 2007; 20(1):32-38 10.1002/jmr.805 17094178 no unknown (Nexterion Slide H?)

p/MHC microarrays; T cells; antigens; epitopes; TCR; high-throughput screening; immune responsevaccines; infectious diseases

325 Douglas ES, Chandra RA, Bertozzi CR, Mathies RA, Francis MB2007 Self-assembled cellular microarrays patterned using DNA barcodes Lab Chip. 2007; 7(11):1442-1448 10.1039/b708666k 17960269 yes Nexterion Slide AL

326 Fadloun A, Kobi D, Pointud JC, Indra AK, Teletin M, Bole-Feysot C, Testoni B, Mantovani R, Metzger D, Mengus G, Davidson I2007 The TFIID subunit TAF4 regulates keratinocyte proliferation and has cell-autonomous and non-cell-autonomous tumour suppressor activity in mouse epidermis

Development. 2007; 134(16):2947-2958 10.1242/dev.005041 17626060 yes Nexterion Slide H alopecia; hair cycle; growth factors; EGF; TPA; Wnt pathway; homologous recombination

327 Feige JN, Gelman L, Rossi D, Zoete V, Métivier R, Tudor C, Anghel SI, Grosdidier A, Lathion C, Engelborghs Y, Michielin O, Wahli W, Desvergne B2007 The endocrine disruptor monoethyl-hexyl-phthalate is a selective peroxisome proliferator-activated receptor gamma modulator that promotes adipogenesis

J Biol Chem. 2007; 282(26):19152-19166 10.1074/jbc.M702724200 17468099 yes Nexterion Slide AL

328 Feinberg H, Taylor ME, Weis WI2007 Scavenger receptor C-type lectin binds to the leukocyte cell surface glycan Lewis(x) by a novel mechanism

J Biol Chem. 2007; 282(23):17250-17258 10.1074/jbc.M701624200 17420244 yes Nexterion Slide H

329 Field S, Udalova I, Ragoussis J2007 Accuracy and reproducibility of protein-DNA microarray technology Adv Biochem Eng Biotechnol. 2007; 104:87-110 10.1007/10_2006_035 17290820 no Nexterion Slide AL affinity; cell extract; consensus; DNA-binding domain; DNA-protein interactions; hybridisation; transcription factor; protein purification; protein-binding microarray

330 Fong CJ, Burgoon LD, Williams KJ, Forgacs AL, Zacharewski TR2007 Comparative temporal and dose-dependent morphological and transcriptional uterine effects elicited by tamoxifen and ethynylestradiol in immature, ovariectomized mice


331 Friis LM, Pin C, Taylor DE, Pearson BM, Wells JM2007 A role for the tet(O) plasmid in maintaining Campylobacter plasticity Plasmid. 2007; 57(1):18-28 10.1016/j.plasmid.2006.06.005 16934869 no Nexterion Slide A+ microarray; tetracycline; Campylobacter; plasticity

332 Gibcus JH, Kok K, Menkema L, Hermsen MA, Mastik M, Kluin PM, van der Wal JE, Schuuring E2007 High-resolution mapping identifies a commonly amplified 11q13.3 region containing multiple genes flanked by segmental duplications

Hum Genet. 2007; 121(2):187-201 10.1007/s00439-006-0299-6 17171571 no Nexterion Slide E Nexterion Block E, Nexterion Hyb

333 Grainger DW, Greef CH, Gong P, Lochhead MJ2007 Current microarray surface chemistries Methods Mol Biol. 2007; 381:37-57 10.1007/978-1-59745-303-5_2 17984513 no Nexterion Slide A, Nexterion Slide A+, Nexterion Slide AL, Nexterion Slide E, Nexterion Slide H

bioassay; carbohydrate array; diagnostics; DNA array; glass slide; hydrogel; microarray; nonspecific binding; peptide array; polymer coating; protein array; silane; surface chemistry; surface immobilization

334 Gregersen PL, Holm PB2007 Transcriptome analysis of senescence in the flag leaf of wheat (Triticum aestivum L.)

Plant Biotechnol J. 2007; 5(1):192-206 10.1111/j.1467-7652.2006.00232.x 17207268 yes Nexterion Slide A leaf senescence; microarrays; nutrient remobilization; transcriptome; Triticum aestivum

335 Han MK, Seo MH, Lee D, Kim SH, Park HS, Kim HS2007 Optimization of critical factors affecting the performance of an allergen chip for the analysis of an allergen-specific human IgE in serum

Anal Sci. 2007; 23(5):545-549 10.2116/analsci.23.545 17495399 yes Nexterion Slide E

336 Harbers GM, Emoto K, Greef C, Metzger SW, Woodward HN, Mascali JJ, Grainger DW, Lochhead MJ2007 Functionalized poly(ethylene glycol)-based bioassay surface chemistry that facilitates bio-immobilization and inhibits nonspecific protein, bacterial, and mammalian cell adhesion

Chem Mater. 2007; 19(18):4405-4414 10.1021/cm070509u no Nexterion Glass D

337 Heil JR, Schneider DJ2007 Multiplexed analyses of test samples United States Patent Application 20070166741 US20070166741 yes Nexterion Slide H338 Kaltgrad E, Sen Gupta S, Punna S, Huang CY, Chang A, Wong CH, Finn MG, Blixt O2007 Anti-carbohydrate antibodies elicited by polyvalent display on a viral scaffold Chembiochem. 2007; 8(12):1455-1462 10.1002/cbic.200700225 17676704 no Nexterion Slide H antibodies; antigens; arrays;

carbohydrates; viruses339 Kim J, Crooks RM 2007 Replication of DNA microarrays prepared by in situ oligonucleotide

polymerization and mechanical transferAnal Chem. 2007; 79(19):7267-7674 10.1021/ac0715219 17803283 no Nexterion Slide E

340 Kim J, Crooks RM 2007 Parallel fabrication of RNA microarrays by mechanical transfer from a DNA master

Anal Chem. 2007; 79(23):8994-8999 10.1021/ac7015954 17963362 no Nexterion Slide E

341 Kim YP, Oh E, Oh YH, Moon DW, Lee TG, Kim HS2007 Protein kinase assay on peptide-conjugated gold nanoparticles by using secondary-ion mass spectrometric imaging

Angew Chem Int Ed Engl. 2007; 46(36):6816-6819 10.1002/anie.200701418 17665386 no Nexterion Slide A+ assays; kinases; mass spectrometry; nanoparticles; peptides

342 Kim YP, Oh YH, Kim HS2007 Protein kinase assay on peptide-conjugated gold nanoparticles Biosens Bioelectron. 2008; 23(7):980-986 10.1016/j.bios.2007.10.001 18024102 no Nexterion Slide A+ protein kinase; phosphorylation; gold nanoparticles; peptide; fluorescent assay

343 Kim YP, Oh YH, Oh E, Kim HS2007 Chip-based protease assay using fluorescence resonance energy transfer between quantum dots and fluorophores

Biochip J 2007; 1(4):228-233 link yes Nexterion Slide H chip, protease, enzyme assay, FRET, peptide, quantum dot

344 Kluiver J, Kok K, Pfeil I, de Jong D, Blokzijl T, Harms G, van der Vlies P, Diepstra A, Atayar C, Poppema S, Küppers R, van den Berg A2007 Global correlation of genome and transcriptome changes in classical Hodgkin lymphoma

Hematol Oncol. 2007; 25(1):21-29 10.1002/hon.804 17048263 no Nexterion Slide E Hodgkin lymphoma; SAGE; array-based CGH; IRAK1; FSCN1

345 Kühner F, Morfill J, Neher RA, Blank K, Gaub HE2007 Force-induced DNA slippage Biophys J. 2007;92(7):2491-2497 10.1529/biophysj.106.095836 17218463 yes Nexterion Slide A346 Kulterer B, Friedl G, Jandrositz A, Sanchez-Cabo F, Prokesch A, Paar C, Scheideler M, Windhager R, Preisegger KH, Trajanoski Z2007 Gene expression profiling of human mesenchymal stem cells derived from

bone marrow during expansion and osteoblast differentiationBMC Genomics. 2007; 8:70 10.1186/1471-2164-8-70 17352823 yes Nexterion Slide E

347 Kumari K, Gulati S, Smith DF, Gulati U, Cummings RD, Air GM2007 Receptor binding specificity of recent human H3N2 influenza viruses Virol J. 2007; 4:42 10.1186/1743-422X-4-42 17490484 yes Nexterion Slide H

348 Liang PH, Wang SK, Wong CH2007 Quantitative analysis of carbohydrate-protein interactions using glycan microarrays: determination of surface and solution dissociation constants

J Am Chem Soc. 2007; 129(36):11177-11184 10.1021/ja072931h 17705486 no Nexterion Slide H

349 Liu, DR, Kanan, MW, Rozenman, MM2007 Palladium-catalyzed carbon-carbon bond forming reactions United States Patent Application 20070066851 US20070066851 yes Nexterion Slide AL

350 Lo KC, Ma C, Bundy BN, Pomeroy SL, Eberhart CG, Cowell JK2007 Gain of 1q is a potential univariate negative prognostic marker for survival in medulloblastoma

Clin Cancer Res. 2007; 13(23):7022-7028 10.1158/1078-0432.CCR-07-1420 18056178 yes Nexterion Slide A

351 Lo KC, Rossi MR, Burkhardt T, Pomeroy SL, Cowell JK2007 Overlay analysis of the oligonucleotide array gene expression profiles and copy number abnormalities as determined by array comparative genomic hybridization in medulloblastomas

Genes Chromosomes Cancer. 2007;46(1):53-66 10.1002/gcc.20388 17044047 no Nexterion Slide A

352 Lo KC, Rossi MR, Eberhart CG, Cowell JK2007 Genome wide copy number abnormalities in pediatric medulloblastomas as assessed by array comparative genome hybridization

Brain Pathol. 2007; 17(3):282-296 10.1111/j.1750-3639.2007.00072.x 17465989 no Nexterion Slide A

353 Loch CM, Ramirez AB, Liu Y, Sather CL, Delrow JJ, Scholler N, Garvik BM, Urban ND, McIntosh MW, Lampe PD.2007 Use of high density antibody arrays to validate and discover cancer serum biomarkers

Mol Oncol. 2007; 1(3):313-320 10.1016/j.molonc.2007.08.004 19383305 (yes) Nexterion Slide H

354 Loos M, Bergmann F, Bauer A, Hoheisel JD, Esposito I, Kleeff J, Schirmacher P, Büchler MW, Klöppel G, Friess H2007 Solid type clear cell carcinoma of the pancreas: differential diagnosis of an unusual case and review of the literature

Virchows Arch. 2007; 450(6):719-726 10.1007/s00428-007-0416-5 17453235 (no) Nexterion Slide E pancreatic neoplasm; microarray;expression profiling

355 Lukashova-v Zangen I, Kneitz S, Monoranu CM, Rutkowski S, Hinkes B, Vince GH, Huang B, Roggendorf W2007 Ependymoma gene expression profiles associated with histological subtype, proliferation, and patient survival

Acta Neuropathol. 2007; 113(3):325-337 10.1007/s00401-006-0190-5 17265049 no Nexterion Slide E ependymoma; subependymoma;microarray analysis; overall survival; Ki-67

356 Mättö J, van Hoek AHAM, Domig KJ, Saarela M, Belén Floréz A, Brockmann E, Amtmann E, Mayo B, Aarts HJM, Danielsen M2007 Susceptibility of human and probiotic Bifidobacterium spp. to selected antibiotics as determined by the Etest method

Int Dairy J 2007; 17(9):1123-1131 10.1016/j.idairyj.2007.01.008 no Nexterion Slide E Bifidobacterium; antimicrobial susceptibility; tetracycline; probiotic; human intestinal

357 Mazzitelli L, Hancock RD, Haupt S, Walker PG, Pont SD, McNicol J, Cardle L, Morris J, Viola R, Brennan R, Hedley PE, Taylor MA2007 Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds

J Exp Bot. 2007; 58(5):1035-1045 10.1093/jxb/erl266 17244630 yes Nexterion Slide A or A+ dormancy; forcing; gene expression; microarray; raspberry buds

358 McKessar SJ, Hakenbeck R2007 The two-component regulatory system TCS08 is involved in cellobiose metabolism of Streptococcus pneumoniae R6

J Bacteriol. 2007; 189(4):1342-1350 10.1128/JB.01170-06 17028271 yes Nexterion Slide E Nexterion Hyb

359 Mertins S, Joseph B, Goetz M, Ecke R, Seidel G, Sprehe M, Hillen W, Goebel W, Müller-Altrock S2007 Interference of components of the phosphoenolpyruvate phosphotransferase system with the central virulence gene regulator PrfA of Listeria monocytogenes

J Bacteriol. 2007; 189(2):473-490 10.1128/JB.00972-06 17085572 yes Nexterion Slide E

360 Metfies , Medlin LK 2007 Refining cryptophyte identification with DNA-microarrays J Plankton Res. 2007; 29(12):1071-1075 10.1093/plankt/fbm080 no Nexterion Slide E Nexterion Spot361 Metfies K, Berzano M, Mayer C, Roosken P, Gualerzip C, Medlin L, Muyzer G2007 An optimized protocol for the identification of diatoms, flagellated algae and

pathogenic protozoa with phylochipsMol Ecol Notes. 2007; 7(6):925-936 10.1111/j.1471-8286.2007.01799.x no Nexterion Slide E diatoms; flagellated algae; molecular

probes; optimized protocol; phylochip

362 Miliaras D, Conroy J, Pervana S, Meditskou S, McQuaid D, Nowak N2007 Karyotypic changes detected by comparative genomic hybridization in a stillborn infant with chorioangioma and liver hemangioma

Birth Defects Res A Clin Mol Teratol. 2007; 79(3):236-241 10.1002/bdra.20332 17203486 no Nexterion Slide A+ array CGH; karyotype; chorioangioma; placental hemangioma; liver hemangioma

363 Milne TS, Michell SL, Diaper H, Wikström P, Svensson K, Oyston PC, Titball RW2007 A 55 kDa hypothetical membrane protein is an iron-regulated virulence factor of Francisella tularensis subsp. novicida U112

J Med Microbiol. 2007; 56(Pt 10):1268-1276 10.1099/jmm.0.47190-0 17893160 yes Nexterion Slide A

364 Morfill J, Blank K, Zahnd C, Luginbühl B, Kühner F, Gottschalk KE, Plückthun A, Gaub HE2007 Affinity-matured recombinant antibody fragments analyzed by single-molecule force spectroscopy

Biophys J. 2007; 93(10):3583-3590 10.1529/biophysj.107.112532 17675348 yes Nexterion Slide A

365 Morfill J, Kühner F, Blank K, Lugmaier RA,Sedlmair J, Gaub HE2007 B-S transition in short oligonucleotides Biophys J. 2007; 93(7):2400-2409 10.1529/biophysj.107.106112 yes Nexterion Slide A366 Moulager M, Monnier A, Jesson B, Bouvet R, Mosser J, Schwartz C, Garnier L, Corellou F, Bouget FY2007 Light-dependent regulation of cell division in Ostreococcus: evidence for a

major transcriptional inputPlant Physiol. 2007; 144(3):1360-1369 10.1104/pp.107.096149 17535824 yes Nexterion Slide E Nexterion Spot, Nexterion

Hyb367 Murad H, Collet P, Brunner E, Schohn H, Bécuwe P, Devignes MD, Dauça M, Domenjoud L2007 Immunoselection and characterization of a human genomic PPAR binding

fragment located within POTE genesBiochimie. 2007; 89(3):329-336 10.1016/j.biochi.2006.09.017 17070643 no Nexterion Slide H peroxisome proliferator-activated

receptors; PPARs; PPAR target genes; POTE genes

368 O'Connell RM, Taganov KD, Boldin MP, Cheng G, Baltimore D2007 MicroRNA-155 is induced during the macrophage inflammatory response Proc Natl Acad Sci U S A. 2007; 104(5):1604-1609 10.1073/pnas.0610731104 17242365 yes Nexterion Slide E cancer; inflammation; innate immunity; cytokines

369 Oh YH, Kim YP, Kim HS2007 SUMO (small ubiquitin-like modifier) chip for analysisof SUMO-conjugation to a target protein

Biochip J 2007; 1(1):28-34 link yes Nexterion Slide E, Nexterion Slide H

PTM (post translational modification); SUMO(small ubiquitin-like modifier); protein microarray; cell-freeexpression system

370 Oh YH, Hong MY, Jin Z, Lee T, Han MK, Park S, Kim HS2007 Chip-based analysis of SUMO (small ubiquitin-like modifier) conjugation to a target protein

Biosens Bioelectron. 2007; 22(7):1260-1267 10.1016/j.bios.2006.05.023 16820290 no Nexterion Slide E, Nexterion Slide H

SUMO (small ubiquitin-like modifier); protein microarray; post translational modification; chip-based analysis

371 Ojha A, Hatfull GF 2007 The role of iron in Mycobacterium smegmatis biofilm formation: the exochelin siderophore is essential in limiting iron conditions for biofilm formation but not for planktonic growth

Mol Microbiol. 2007; 66(2):468-483 10.1111/j.1365-2958.2007.05935.x 17854402 yes Nexterion Slide E Nexterion Spot, Nexterion LEB 2 (discontinued)

372 Pilobello KT, Slawek DE, Mahal LK2007 A ratiometric lectin microarray approach to analysis of the dynamic mammalian glycome

Proc Natl Acad Sci U S A. 2007; 104(28):11534-11539 10.1073/pnas.0704954104 17606908 yes Nexterion Slide H

373 Pilobello T, Mahal LK2007 Lectin microarrays for glycoprotein analysis Methods Mol Biol. 2008; 385:193-203 10.1007/978-1-59745-426-1_14 no Nexterion Slide H lectin microarray; glycomics; carbohydrate analysis; glycan profiling; array

374 Puissegur MP, Lay G, Gilleron M, Botella L, Nigou J, Marrakchi H, Mari B, Duteyrat JL, Guerardel Y, Kremer L, Barbry P, Puzo G, Altare F2007 Mycobacterial lipomannan induces granuloma macrophage fusion via a TLR2-dependent, ADAM9- and beta1 integrin-mediated pathway

J Immunol. 2007; 178(5):3161-3169 link 17312164 yes Nexterion Slide H

375 Raver-Shapira N, Marciano E, Meiri E, Spector Y, Rosenfeld N, Moskovits N, Bentwich Z, Oren M2007 Transcriptional activation of miR-34a contributes to p53-mediated apoptosis Mol Cell. 2007; 26(5):731-743 10.1016/j.molcel.2007.05.017 17540598 yes Nexterion Slide E

376 Reck M, Stahl F, Walter JG, Hollas M, Melzner D, Scheper T2007 Optimization of a microarray sandwich-ELISA against hINF-gamma on a modified nitrocellulose membrane

Biotechnol Prog. 2007; 23(6):1498-1505 10.1021/bp070179i 17894469 no Nexterion Slide AL, Nexterion Slide H

377 Regha K, Sloane MA, Huang R, Pauler FM, Warczok KE, Melikant B, Radolf M, Martens JH, Schotta G, Jenuwein T, Barlow DP2007 Active and repressive chromatin are interspersed without spreading in an imprinted gene cluster in the mammalian genome

Mol Cell. 2007; 27(3):353-366 10.1016/j.molcel.2007.06.024 17679087 yes Nexterion Slide A+

378 Rupp S, Johannes FJ, Sohn,K2007 Hyphen-specific factors from Candida albicans United States Patent 7220574 US7220574 yes Nexterion Slide E379 Salathia N, Lee HN, Sangster TA, Morneau K, Landry CR, Schellenberg K, Behere AS, Gunderson KL, Cavalieri D, Jander G, Queitsch C2007 Indel arrays: an affordable alternative for genotyping Plant J. 2007; 51(4):727-737 10.1111/j.1365-313X.2007.03194.x 17645438 yes Nexterion Slide AL, Nexterion

Slide AL MPX-16microarray; indel; genotyping; mutant mapping

380 Saldarriaga Fernández IC, van der Mei HC, Lochhead MJ, Grainger DW, Busscher HJ2007 The inhibition of the adhesion of clinically isolated bacterial strains on multi-component cross-linked poly(ethylene glycol)-based polymer coatings

Biomaterials. 2007; 28(28):4105-4112 10.1016/j.biomaterials.2007.05.023 17573108 no Nexterion Glass D bacterial adhesion; poly(ethylene glycol) coating; parallel plate flow chamber; physiological fluids; infection; device

381 Schäfer C, Gehrmann T, Richter L, Keitel V, Köhrer K, Häussinger D, Schliess F2007 Modulation of gene expression profiles by hyperosmolarity and insulin Cell Physiol Biochem. 2007; 20(5):369-386 10.1159/000107522 17762165 yes Nexterion Spot II (discontinued)

insulin resistance; cell volume; translation; cyclinstransport

382 Seurynck-Servoss SL, White AM, Baird CL, Rodland KD, Zangar RC2007 Evaluation of surface chemistries for antibody microarrays Anal Biochem. 2007; 371(1):105-115 10.1016/j.ab.2007.07.010 17718996 (yes) Nexterion Slide AL, Nexterion Slide E, Nexterion Slide H

ELISA; antibody; microarray; solid support

383 Shi C, Uzarowska A, Ouzunova M, Landbeck M, Wenzel G, Lubberstedt T2007 Identification of candidate genes associated with cell wall digestibility and eQTL (expression quantitative trait loci) analysis in a Flint x Flint maize recombinant inbred line population

BMC Genomics. 2007; 8:22 10.1186/1471-2164-8-22 17233901 yes Nexterion Slide A+

384 Stoevesandt O, Kohler K, Wolf S, Andre T, Hummel W, Brock R2007 A network analysis of changes in molecular interactions in cellular signaling Mol Cell Proteomics. 2007; 6(3):503-513 10.1074/mcp.M600383-MCP200 17190788 yes Nexterion Slide E

385 Sun L, Liu D, Wang Z2007 Microarray-based kinase inhibition assay by gold nanoparticle probes Anal Chem. 2007; 79(2):773-777 10.1021/ac061687u 17222050 no Nexterion Slide H MPX-16

386 Tao SC, Chen CS, Zhu H2007 Applications of protein microarray technology Comb Chem High T Scr. 2007; 10(8):706-718 link 18045082 no Nexterion Slide H DNA microarray construction; cDNA libraries; chip substrate; protein-lipid interactions; glycosylation

387 Tateno H, Uchiyama N, Kuno A, Togayachi A, Sato T, Narimatsu H, Hirabayashi J2007 A novel strategy for mammalian cell surface glycome profiling using lectin microarray

Glycobiology. 2007; 17(10):1138-1146 10.1093/glycob/cwm084 17693441 yes Nexterion Slide E glycome; lectin microarray; live cells; profiling

388 Tessier PM, Lindquist S2007 Prion recognition elements govern nucleation, strain specificity and species barriers

Nature. 2007; 447(7144):556-561 10.1038/nature05848 17495929 (no) Nexterion Slide H

389 Thum T, Galuppo P, Wolf C, Fiedler J, Kneitz S, van Laake LW, Doevendans PA, Mummery CL, Borlak J, Haverich A, Gross C, Engelhardt S, Ertl G, Bauersachs J2007 MicroRNAs in the human heart: a clue to fetal gene reprogramming in heart failure

Circulation. 2007; 116(3):258-267 10.1161/CIRCULATIONAHA.107.687947 17606841 yes Nexterion Slide E cardiomyopathy; heart failure; fetal heart; microRNAs

390 Viñuelas J, Calevro F, Remond D, Bernillon J, Rahbé Y, Febvay G, Fayard JM, Charles H2007 Conservation of the links between gene transcription and chromosomal organization in the highly reduced genome of Buchnera aphidicola

BMC Genomics. 2007; 8:143 10.1186/1471-2164-8-143 17547756 yes Nexterion Slide AL

391 Voolstra C, Tautz D, Farbrother P, Eichinger L, Harr B2007 Contrasting evolution of expression differences in the testis between species and subspecies of the house mouse

Genome Res. 2007; 17(1):42-49 10.1101/gr.5683806 17038563 yes Nexterion Slide H

392 Wang J, Jemielity S, Uva P, Wurm Y, Gräff J, Keller L2007 An annotated cDNA library and microarray for large-scale gene-expression studies in the ant Solenopsis invicta

Genome Biol. 2007; 8(1):R9 10.1186/gb-2007-8-1-r9 17224046 yes Nexterion Slide AL

393 Wang T, Zhang X, Obijuru L, Laser J, Aris V, Lee P, Mittal K, Soteropoulos P, Wei JJ2007 A micro-RNA signature associated with race, tumor size, and target gene activity in human uterine leiomyomas


394 Watson MB, Lind MJ, Smith L, Drew PJ, Cawkwell L2007 Expression microarray analysis reveals genes associated with in vitro resistance to cisplatin in a cell line model

Acta Oncol. 2007; 46(5):651-658 10.1080/02841860601156157 17562441 yes Nexterion Slide E Nexterion Block E, Nexterion Hyb

395 Watson SK, deLeeuw RJ, Horsman DE, Squire JA, Lam WL2007 Cytogenetically balanced translocations are associated with focal copy number alterations

Hum Genet. 2007; 120(6):795-805 10.1007/s00439-006-0251-9 17051368 no Nexterion Slide AL

396 Wiehlmann L, Wagner G, Cramer N, Siebert B, Gudowius P, Morales G, Köhler T, van Delden C, Weinel C, Slickers P, Tümmler B2007 Population structure of Pseudomonas aeruginosa Proc Natl Acad Sci U S A. 2007; 104(19):8101-8106 10.1073/pnas.0609213104 17468398 yes Nexterion Glass B Nexterion Spot bacterial evolution; chip technology; population genetics

397 Wilson SJ, Tsao EH, Webb BL, Ye H, Dalton-Griffin L, Tsantoulas C, Gale CV, Du MQ, Whitehouse A, Kellam P2007 X box binding protein XBP-1s transactivates the Kaposi's sarcoma-associated herpesvirus (KSHV) ORF50 promoter, linking plasma cell differentiation to KSHV reactivation from latency

J Virol. 2007; 81(24):13578-13586 10.1128/JVI.01663-07 17928342 yes Nexterion Slide A or A+

398 Wingren C, Ingvarsson J, Dexlin L, Szul D, Borrebaeck CA2007 Design of recombinant antibody microarrays for complex proteome analysis: choice of sample labeling-tag and solid support

Proteomics. 2007 7(17):3055-3065 10.1002/pmic.200700025 17787036 no Nexterion Slide H antibody microarray; protein labeling; proteome analysis; recombinant scFv; solid support

399 Winssinger N, Pianowski Z, Debaene F2007 Probing biology with small molecule microarrays (SMM) Top Curr Chem. 2007; 278:311-342 10.1007/128_2007_109 no Nexterion Slide A, Nexterion Slide A+, Nexterion Slide AL, Nexterion Slide E, Nexterion Slide H

activity profiling; combinatorial libraries; diagnostic; screening; small molecule microarray (SMM)

400 Xing Y, Borguet E 2007 Specificity and sensitivity of fluorescence labeling of surface species Langmuir. 2007; 23(2):684-688 10.1021/la060994s 17209620 no Nexterion Slide A,

401 Yang ZY, Wei CJ, Kong WP, Wu L, Xu L, Smith DF, Nabel GJ2007 Immunization by avian H5 influenza hemagglutinin mutants with altered receptor binding specificity

Science. 2007; 317(5839):825-828 10.1126/science.1135165 17690300 yes Nexterion Slide H

402 Zindy F, Uziel T, Ayrault O, Calabrese C, Valentine M, Rehg JE, Gilbertson RJ, Sherr CJ, Roussel MF2007 Genetic alterations in mouse medulloblastomas and generation of tumors de novo from primary cerebellar granule neuron precursors

Cancer Res. 2007; 67(6):2676-2684 10.1158/0008-5472.CAN-06-3418 17363588 yes Nexterion Slide A+

403 Ahmed FE 2006 Microarray RNA transcriptional profiling: Part I. Platforms, experimental design and standardization

Expert Rev Mol Diagn. 2006; 6(4):535-550 10.1586/14737159.6.4.535 16824028 no Nexterion Slide AL, Nexterion Slide E, Nexterion Slide H, Nexterion Slide MPX-16, Nexterion Slide MPX-48

Nexterion MPX-16 Superstructures

404 Ahmed FE 2006 Expression microarray proteomics and the search for cancer biomarkers Curr Genomics. 2006; 7(7):399-426 10.2174/138920206779116792 no Nexterion Slide AL, Nexterion Slide E, Nexterion Slide H

classification; surface chemistry; detection; capture agents; standards; data analysis

405 Andresen H, Zarse K, Grötzinger C, Hollidt JM, Ehrentreich-Förster E, Bier FF, Kreuzer OJ2006 Development of peptide microarrays for epitope mapping of antibodies against the human TSH receptor

J Immunol Methods. 2006; 315(1-2):11-18 10.1016/j.jim.2006.06.012 16920148 no Nexterion Slide AL peptide microarray; epitope mapping; TSH receptor; site-specific immobilization; autoimmune disease; muliplex immunoassay

406 Atayar C, Kok K, Kluiver J, Bosga A, van den Berg E, van der Vlies P, Blokzijl T, Harms G, Davelaar I, Sikkema-Raddatz B, Martin-Subero JI, Siebert R, Poppema S, van den Berg A2006 BCL6 alternative breakpoint region break and homozygous deletion of 17q24 in the nodular lymphocyte predominance type of Hodgkin's lymphoma-derived cell line DEV

Hum Pathol. 2006; 37(6):675-683 10.1016/j.humpath.2006.01.018 16733207 no Nexterion Slide E Nexterion Hyb DEV; Hodgkin’s lymphoma; NLPHL; BCL6 ABR breakpoint; 17q24 deletion

407 Avril T, North SJ, Haslam SM, Willison HJ, Crocker PR2006 Probing the cis interactions of the inhibitory receptor Siglec-7 with alpha2,8-disialylated ligands on natural killer cells and other leukocytes using glycan-specific antibodies and by analysis of alpha2,8-sialyltransferase gene expression

J Leukoc Biol. 2006; 80(4):787-796 10.1189/jlb.1005559 16857734 yes Nexterion Slide H NK cells; sialic acid; MALDI-TOF

408 Bacac M, Provero P, Mayran N, Stehle JC, Fusco C, Stamenkovic I2006 A mouse stromal response to tumor invasion predicts prostate and breast cancer patient survival

PLoS One. 2006; 1:e32 10.1371/journal.pone.0000032 17183660 yes Nexterion Slide AL

409 Bailly X, Béna G, Lenief V, de Lajudie P, Avarre JC2006 Development of a lab-made microarray for analyzing the genetic diversity of nitrogen fixing symbionts Sinorhizobium meliloti and Sinorhizobium medicae

J Microbiol Methods. 2006; 67(1):114-124 10.1016/j.mimet.2006.03.006 16626823 no Nexterion Slide E Nexterion Spot microarray; array surface; genotyping; Sinorhizobium

410 Bilitewski U 2006 Protein-sensing assay formats and devices Anal Chim Acta. 2006; 568(1-2):232-247 10.1016/j.aca.2005.12.073 17761265 no Nexterion Slides protein chips; arrays; phosphorylation; protein activity; Immobilization

411 Blixt Ola, Head S 2006 High throughput glycan microarrays United States Patent Application 20070059769 US20070059769 yes Nexterion Slide H412 Bobik C, Meilhoc E, Batut J2006 FixJ: a major regulator of the oxygen limitation response and late symbiotic

functions of Sinorhizobium melilotiJ Bacteriol. 2006; 188(13):4890-4902 10.1128/JB.00251-06 16788198 yes Nexterion Slide E Nexterion Block E

413 Bohorov O, Andersson-Sand H, Hoffmann J, Blixt O2006 Arraying glycomics: a novel bi-functional spacer for one-step microscale derivatization of free reducing glycans

Glycobiology. 2006; 16(12):21C-27C 10.1093/glycob/cwl044 16971379 yes Nexterion Slide H microarray; oligosaccharide; polysaccharide; reducing-end derivatization

414 Boverhof DR, Burgoon LD, Tashiro C, Sharratt B, Chittim B, Harkema JR, Mendrick DL, Zacharewski TR2006 Comparative toxicogenomic analysis of the hepatotoxic effects of TCDD in Sprague Dawley rats and C57BL/6 mice

Toxicol Sci. 2006 Dec;94(2):398-416 10.1093/toxsci/kfl100 16960034 yes Nexterion Slide E TCDD; toxicogenomics; liver; cross-species comparison

415 Boverhof DR, Kwekel JC, Humes DG, Burgoon LD, Zacharewski TR2006 Dioxin induces an estrogen-like, estrogen receptor-dependent gene expression response in the murine uterus

Mol Pharmacol. 2006; 69(5):1599-1606 10.1124/mol.105.019638 16467188 yes Nexterion Slide E

416 Brune I, Becker A, Paarmann D, Albersmeier A, Kalinowski J, Pühler A, Tauch A2006 Under the influence of the active deodorant ingredient 4-hydroxy-3-methoxybenzyl alcohol, the skin bacterium Corynebacterium jeikeium moderately responds with differential gene expression

J Biotechnol. 2006; 127(1):21-33 10.1016/j.jbiotec.2006.06.0112 16890319 no Nexterion Slide E Nexterion Block E Corynebacterium jeikeium; human skin flora; axillary odor formation; oligonucleotide microarray; genome-wide expressionprofiling; deodorant ingredient

417 Burton JE, Oshota OJ, Silman NJ2006 Differential identification of Bacillus anthracis from environmental Bacillus species using microarray analysis

J Appl Microbiol. 2006; 101(4):754-763 10.1111/j.1365-2672.2006.02991.x 16968287 yes Nexterion Slide A Bacillus anthracis; bioterrorism; differential identification; DNA microarray detection; environmental Bacillus species

418 Campbell CJ, O'Looney N, Chong Kwan M, Robb JS, Ross AJ, Beattie JS, Petrik J, Ghazal P2006 Cell interaction microarray for blood phenotyping Anal Chem. 2006; 78(6):1930-1938 10.1021/ac051651m 16536430 no Nexterion Slide H419 Charles H, Calevro F, Vinuelas J, Fayard JM, Rahbe Y2006 Codon usage bias and tRNA over-expression in Buchnera aphidicola after

aromatic amino acid nutritional stress on its host Acyrthosiphon pisumNucleic Acids Res. 2006; 34(16):4583-4592 10.1093/nar/gkl597 16963497 yes Nexterion Slide AL

420 Chen JC, Hottes AK, McAdams HH, McGrath PT, Viollier PH, Shapiro L2006 Cytokinesis signals truncation of the PodJ polarity factor by a cell cycle-regulated protease

EMBO J. 2006; 25(2):377-386 10.1038/sj.emboj.7600935 16395329 yes Nexterion Slide AL Nexterion Spot cell division; differentiation; microarray analysis; pilus; proteolysis

421 Cherbas L, Bogart K, Zou Y, Cherbas P, Andrews J2006 DGRC-2: Spotted oligonucleotide transcriptome microarrays for the Drosophila community

CGB Technical Report. 2006; 2006-01 10.2506/cgbtr-200601 yes Nexterion Slide E

422 Crapoulet N, Barbry P, Raoult D, Renesto P2006 Global transcriptome analysis of Tropheryma whipplei in response to temperature stresses

J Bacteriol. 2006; 188(14):5228-5239 10.1128/JB.00507-06 16816195 yes Nexterion Slide A+

423 Cui S, Albrecht C, Kühner F, Gaub HE2006 Weakly bound water molecules shorten single-stranded DNA J Am Chem Soc. 2006; 128(20):6636-6639 10.1021/ja0582298 16704264 no Nexterion Slide A+

424 Culf AS, Cuperlovic-Culf M, Ouellette RJ2006 Carbohydrate microarrays: survey of fabrication techniques OMICS. 2006; 10(3):289-310 10.1089/omi.2006.10.289 17069509 no Nexterion Slide H

425 De Kerpel M, Van Molle I, Brys L, Wyns L, De Greve H, Bouckaert J2006 N-terminal truncation enables crystallization of the receptor-binding domain of the FedF bacterial adhesin

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 ; 62(Pt 12):1278-128210.1107/S1744309106049281 17142917 yes Nexterion Slide H

426 Dere E, Boverhof DR, Burgoon LD, Zacharewski TR2006 In vivo-in vitro toxicogenomic comparison of TCDD-elicited gene expression in Hepa1c1c7 mouse hepatoma cells and C57BL/6 hepatic tissue


427 Dijkhuizen T, van Essen T, van der Vlies P, Verheij JB, Sikkema-Raddatz B, van der Veen AY, Gerssen-Schoorl KB, Buys CH, Kok K2006 FISH and array-CGH analysis of a complex chromosome 3 aberration suggests that loss of CNTN4 and CRBN contributes to mental retardation in 3pter deletions

Am J Med Genet A. 2006; 140(22):2482-2487 10.1002/ajmg.a.31487 17036314 no Nexterion Slide E array-CGH analysis; mental retardation; CNTN4; CHL1; CRBN; 3p- syndrome; trisomy 3p syndrome

428 Dyukova VI, Shilova NV, Galanina OE, Rubina AY, Bovin NV2006 Design of carbohydrate multiarrays Biochim Biophys Acta. 2006; 1760(4):603-609 10.1016/j.bbagen.2005.12.005 16466673 (no) Nexterion Slide H glycochip; carbohydrate array; oligosaccharide

429 Ehrbrecht A, Müller U, Wolter M, Hoischen A, Koch A, Radlwimmer B, Actor B, Mincheva A, Pietsch T, Lichter P, Reifenberger G, Weber RG2006 Comprehensive genomic analysis of desmoplastic medulloblastomas: identification of novel amplified genes and separate evaluation of the different histological components

J Pathol. 2006; 208(4):554-563 10.1002/path.1925 16400626 no Nexterion Slide E comparative genomic hybridization; gene amplification; edulloblastoma; molecular genetics; RPS6KB1

430 Eisenstein M 2006 Quality considerations and selection of surface chemistry for glass-based DNA, peptide, antibody, carbohydrate, and small molecule microarrays

Nature. 2006; 444(7121):959-962 10.1038/444959a 17167490 yes Nexterion Slide H

431 Fernaays MM, Lesse AJ, Sethi S, Cai X, Murphy TF2006 Differential genome contents of nontypeable Haemophilus influenzae strains from adults with chronic obstructive pulmonary disease

Infect Immun. 2006; 74(6):3366-3374 10.1128/IAI.01904-05 16714566 yes Nexterion Slide A

432 Fong CJ, Burgoon LD, Zacharewski TR2006 Effects of culture conditions on estrogen-mediated hepatic in vitro gene expression and correlation to in vivo responses

Toxicol Appl Pharmacol. 2006; 215(1):37-50 10.1016/j.taap.2006.01.014 16519913 no Nexterion Slide E cDNA microarray; 17•-Estradiol; in vitro culture conditions; in vitro vs. in vivo comparison

433 François C, Kebdani N, Barker I, Tomlinson J, Boonham N, Castagnone-Sereno P2006 Towards specific diagnosis of plant-parasitic nematodes using DNA oligonucleotide microarray technology: a case study with the quarantine species Meloidogyne chitwoodi

Mol Cell Probes. 2006; 20(1):64-69 10.1016/j.mcp.2005.09.004 16330184 no Nexterion Slide E Nexterion Spot, Nexterion Block E

diagnostics; Meloidogyne chitwoodi; microarray; root-knot nematode

434 Goidts V, Armengol L, Schempp W, Conroy J, Nowak N, Müller S, Cooper DN, Estivill X, Enard W, Szamalek JM, Hameister H, Kehrer-Sawatzki H2006 Identification of large-scale human-specific copy number differences by inter-species array comparative genomic hybridization

Hum Genet. 2006; 119(1-2):185-198 10.1007/s00439-005-0130-9 16395594 no Nexterion Slide A

435 Goidts V, Cooper DN, Armengol L, Schempp W, Conroy J, Estivill X, Nowak N, Hameister H, Kehrer-Sawatzki H2006 Complex patterns of copy number variation at sites of segmental duplications: an important category of structural variation in the human genome

Hum Genet. 2006; 120(2):270-284 10.1007/s00439-006-0217-y 16838144 no Nexterion Slide A

436 Graindorge A, Thuret R, Pollet N, Osborne HB, Audic Y2006 Identification of post-transcriptionally regulated Xenopus tropicalis maternal mRNAs by microarray

Nucleic Acids Res. 2006; 34(3):986-995 10.1093/nar/gkj492 16464828 yes Nexterion Slide E

437 Gu J, Iyer VR 2006 PI3K signaling and miRNA expression during the response of quiescent human fibroblasts to distinct proliferative stimuli

Genome Biol. 2006; 7(5):R42 10.1186/gb-2006-7-5-r42 16737555 yes Nexterion Slide E

438 Han MK, Hong MY, Lee D, Lee DE, Noh GY, Lee JH, Kim SH, Kim HS2006 Expression profiling of proteins in L-threonine biosynthetic pathway of Escherichia coli by using antibody microarray

Proteomics. 2006; 6(22):5929-5940 10.1002/pmic.200600324 17051646 no Nexterion Slide E antibody microarrays; cross-reactivity; expression profiling; L-threonine biosynthesis

439 Hauser NC, Martinez R, Jacob A, Rupp S, Hoheisel JD, Matysiak S.2006 Utilising the left-helical conformation of L-DNA for analysing different marker types on a single universal microarray platform

Nucleic Acids Res. 2006; 34(18):5101-5111 10.1093/nar/gkl671 16990248 yes Nexterion Slide A+ or A, Nexterion Slide E

440 Henderson B, Kind M, Boeck G, Helmberg A, Wick G2006 Gene expression profiling of human endothelial cells exposed to 50-Hz magnetic fields fails to produce regulated candidate genes

Cell Stress Chaperones. 2006; 11(3):227-232 10.1379/CSC-196.1 17009595 yes Nexterion Slide E

441 Herzog CR, Desai D, Amin S2006 Array CGH analysis reveals chromosomal aberrations in mouse lung adenocarcinomas induced by the human lung carcinogen 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone

Biochem Biophys Res Commun. 2006; 341(3):856-863 10.1016/j.bbrc.2006.01.043 16455056 no Nexterion Slide A or A+ lung adenocarcinoma; array CGH; 4-(Methylnitrosamino)-1-(3-pyridyl)-1-butanone; chromosome instability

442 Hesse J, Jacak J, Kasper M, Regl G, Eichberger T, Winklmayr M, Aberger F, Sonnleitner M, Schlapak R, Howorka S, Muresan L, Frischauf AM, Schütz GJ2006 RNA expression profiling at the single molecule level Genome Res. 2006; 16(8):1041-1045 10.1101/gr.4999906 16809670 yes Nexterion Slide AL443 Hollas M, Jallerat E, Pflanz K, Praulich I, Walter J, Stahl F, Scheper T2006 New 3D black substrate for protein microarrays with improved dynamic range Desalination 2006; 199(1-3):230-231 10.1016/j.desal.2006.03.055 no Nexterion Slide NC

444 Horvay K, Claussen M, Katzer M, Landgrebe J, Pieler T2006 Xenopus Dead end mRNA is a localized maternal determinant that serves a conserved function in germ cell development.

Dev Biol. 2006; 291(1):1-11 10.1016/j.ydbio.2005.06.013 16448642 yes Nexterion Slide (unknown coating)

XDead end; germ cell development; primordial germ cells

445 Hsu KL, Pilobello KT, Mahal LK2006 Analyzing the dynamic bacterial glycome with a lectin microarray approach Nat Chem Biol. 2006; 2(3):153-157 10.1038/nchembio767 16462751 no Nexterion Slide H

446 Hummerich L, Müller R, Hess J, Kokocinski F, Hahn M, Fürstenberger G, Mauch C, Lichter P, Angel P2006 Identification of novel tumour-associated genes differentially expressed in the process of squamous cell cancer development

Oncogene. 2006; 25(1):111-121 10.1038/sj.onc.1209016 16247483 no Nexterion Slide E multistage carcinogenesis; papilloma; squamous cell carcinoma; gene expression profiling; self-organizing maps

447 Jakupovi• M, Heintz M, Reichmann P, Mendgen K, Hahn M2006 Microarray analysis of expressed sequence tags from haustoria of the rust fungus Uromyces fabae

Fungal Genet Biol. 2006; 43(1):8-19 10.1016/j.fgb.2005.09.001 16289953 no Nexterion Slide A Vicia faba; broad bean rust; EST; biotrophy; haustorium; cDNA library

448 Joseph B, Przybilla K, Stühler C, Schauer K, Slaghuis J, Fuchs TM, Goebel W2006 Identification of Listeria monocytogenes genes contributing to intracellular replication by expression profiling and mutant screening

J Bacteriol. 2006; 188(2):556-568 10.1128/JB.188.2.556–568.2006 16385046 yes Nexterion Slide E

449 Kaech S, Banker G 2006 Culturing hippocampal neurons Nat Protoc. 2006; 1(5):2406-2415 10.1038/nprot.2006.356 17406484 yes Nexterion Glass D450 Khan F, He M, Taussig MJ2006 Double-hexahistidine tag with high-affinity binding for protein immobilization,

purification, and detection on ni-nitrilotriacetic acid surfacesAnal Chem. 2006; 78(9):3072-3079 10.1021/ac060184l 16642995 no Nexterion Slide H

451 Kim J, Crooks RM 2006 Transfer of surface polymerase reaction products to a secondary platform with conservation of spatial registration

J Am Chem Soc. 2006; 128(37):12076-12077 10.1021/ja0646139 16967951 no Nexterion Slide E

452 Kühner F, Erdmann M, Gaub HE2006 Scaling exponent and Kuhn length of pinned polymers by single molecule force spectroscopy

Phys Rev Lett. 2006; 97(21):218301 10.1103/PhysRevLett.97.218301 17155778 no Nexterion Slide A

453 Kusnezow W, Syagailo YV, Goychuk I, Hoheisel JD, Wild DG2006 Antibody microarrays: the crucial impact of mass transport on assay kinetics and sensitivity

Expert Rev Mol Diagn. 2006; 6(1):111-124 10.1586/14737159.6.1.111 16359272 no Nexterion Slide A or A+ affinity; ambient analyte theory; antibody microarrays; diffusion; kinetics; mass transport; protein expression profiling; proteomics; sensitivity; surface chemistry; two-compartment model

454 Le Brigand K, Russell R, Moreilhon C, Rouillard JM, Jost B, Amiot F, Magnone V, Bole-Feysot C, Rostagno P, Virolle V, Defamie V, Dessen P, Williams G, Lyons P, Rios G, Mari B, Gulari E, Kastner P, Gidrol X, Freeman TC, Barbry P2006 An open-access long oligonucleotide microarray resource for analysis of the human and mouse transcriptomes

Nucleic Acids Res. 2006; 34(12):e87 10.1093/nar/gkl485 16855282 yes Nexterion Slide H

455 Lo M, Bulach DM, Powell DR, Haake DA, Matsunaga J, Paustian ML, Zuerner RL, Adler B2006 Effects of temperature on gene expression patterns in Leptospira interrogans serovar Lai as assessed by whole-genome microarrays

Infect Immun. 2006; 74(10):5848-5859 10.1128/IAI.00755-06 16988264 yes Nexterion Slide A+

456 Mahajan SD, Hu Z, Reynolds JL, Aalinkeel R, Schwartz SA, Nair MP2006 Methamphetamine modulates gene expression patterns in monocyte derived mature dendritic cells: implications for HIV-1 pathogenesis

Mol Diagn Ther. 2006; 10(4):257-269 link 16884330 no Nexterion Slide A genomics; HIV infections; metamfetamine

457 Marr AK, Joseph B, Mertins S, Ecke R, Müller-Altrock S, Goebel W2006 Overexpression of PrfA leads to growth inhibition of Listeria monocytogenes in glucose-containing culture media by interfering with glucose uptake

J Bacteriol. 2006; 188(11):3887-3901. 10.1128/JB.01978-05 16707681 yes Nexterion Slide E

458 McIntosh, MW 2006 Affinity-based serum proteomics for ovarian cancer early diagnosis Storming Media, W81XWH0810100, A990264 link yes Nexterion Slide H

459 Medlin LK, Metfies K, Mehl H, Wiltshire K, Valentin K2006 Picoeukaryotic plankton diversity at the Helgoland time series site as assessed by three molecular methods.

Microb Ecol. 2006; 52(1):53-71 10.1007/s00248-005-0062-x 16703447 (no) Nexterion Spot

460 Mergaert P, Uchiumi T, Alunni B, Evanno G, Cheron A, Catrice O, Mausset AE, Barloy-Hubler F, Galibert F, Kondorosi A, Kondorosi E2006 Eukaryotic control on bacterial cell cycle and differentiation in the Rhizobium-legume symbiosis

Proc Natl Acad Sci U S A. 2006; 103(13):5230-5235 10.1073/pnas.0600912103 16547129 yes Nexterion Slide E Nexterion Hyb antimicrobial activity; bacteroid; endoreduplication; Medicago; nitrogen fixation

461 Metwalli E, Haines D, Becker O, Conzone S, Pantano CG2006 Surface characterizations of mono-, di-, and tri-aminosilane treated glass substrates

J Colloid Interface Sci. 2006; 298(2):825-831 10.1016/j.jcis.2006.03.045 16631784 no Nexterion Glass B, Nexterion Glass D

glass surface; aminosilane; microarrays; XPS; molecular orientation; Raman

462 N.N. 2006 miRNA Expression Profiling Ambion TechNotes. Aug 2006;13(3):17 link yes Nexterion HiSens E463 Nadiminty N, Lou W, Lee SO, Mehraein-Ghomi F, Kirk JS, Conroy JM, Zhang H, Gao AC2006 Prostate-specific antigen modulates genes involved in bone remodeling and

induces osteoblast differentiation of human osteosarcoma cell line SaOS-2Clin Cancer Res. 2006; 2(5):1420-1430 10.1158/1078-0432.CCR-05-1849 16533764 yes Nexterion Slide A

464 Neuert G, Albrecht C, Pamir E, Gaub HE2006 Dynamic force spectroscopy of the digoxigenin-antibody complex FEBS Lett. 2006; 580(2):505-509 10.1016/j.febslet.2005.12.052 16388805 yes Nexterion Slide E AFM; force spectroscopy; digoxigenin; antibody; loading rate; PEG; nanostructure; epoxy silane

465 Petrik J 2006 Diagnostic applications of microarrays Transfus Med. 2006; 16(4):2233-2247 10.1111/j.1365-3148.2006.00673.x 16879151 no Nexterion Glass B, Nexterion Glass D, Nexterion Slide A, Nexterion Slide AL, Nexterion Slide E

biochip; blood screening; blood testing; cancer; infectious disease; in vitro diagnostics; microarray; nucleic acid testing; point-of-care; typing

466 Preininger C 2006 DNA and protein sensor arrays NATO Sci Ser II Math. 2006; 224:479-500 10.1007/1-4020-4611-1_23 no Nexterion Spot modified467 Rachman H, Lee JS, Angermann J, Kowall J, Kaufmann SH2006 Reliable amplification method for bacterial RNA J Biotechnol. 2006; 126(1):61-68 10.1016/j.jbiotec.2006.02.020 16603269 no Nexterion Spot II

(discontinued)RNA amplification; microarray; mycobacteria

468 Redkar RJ, Schultz NA, Scheumann V, Burzio LA, Haines DE, Metwalli E, Becker O, Conzone SD2006 Signal and sensitivity enhancement through optical interference coating for DNA and protein microarray applications

J Biomol Tech. 2006; 17(2):122-130 link 16741239 yes Nexterion HiSens A DNA microarray; protein microarray; signal amplification; optical interference coating

469 Reese BE, Krissinger D, Yun JK, Billingsley ML2006 Elucidation of stannin function using microarray analysis: implications for cell cycle control

Gene Expr. 2006; 13(1):41-52 link 16572589 no Nexterion Slide E stannin; TNF-•; HUVEC; microarray; cell growth; cell cycle

470 Reymond N, Calevro F, Viñuelas J, Morin N, Rahbé Y, Febvay G, Laugier C, Douglas A, Fayard JM, Charles H2006 Different levels of transcriptional regulation due to trophic constraints in the reduced genome of Buchnera aphidicola APS

Appl Environ Microbiol. 2006; 72(12):7760-7766 10.1128/AEM.01118-06 17041159 yes Nexterion Slide AL

471 Riggi N, Cironi L, Provero P, Suvà ML, Stehle JC, Baumer K, Guillou L, Stamenkovic I2006 Expression of the FUS-CHOP fusion protein in primary mesenchymal progenitor cells gives rise to a model of myxoid liposarcoma

Cancer Res. 2006; 66(14):7016-7023 10.1158/0008-5472.CAN-05-3979 16849546 yes not specified Nexterion slides

472 Rossi MR, Conroy J, McQuaid D, Nowak NJ, Rutka JT, Cowell JK2006 Array CGH analysis of pediatric medulloblastomas Genes Chromosomes Cancer. 2006; 45(3):290-303 10.1002/gcc.20292 16320246 no Nexterion Slide A473 Sanchez JF, Lescar J, Chazalet V, Audfray A, Gagnon J, Alvarez R, Breton C, Imberty A, Mitchell EP2006 Biochemical and structural analysis of Helix pomatia agglutinin. A hexameric

lectin with a novel fold.J Biol Chem. 2006; 281(29):20171-20180 10.1074/jbc.M603452200 16704980 yes Nexterion Slide H

474 Sanguin H, Gazengel K, Kroneisen L, Prigent-Combaret C, Grundmann G, Sarniguet A, Moënne-Loccoz Y2006 Comparaison de sols résistant ou non à la maladie du piétin-échaudage du blé par une approche puce à ADN taxonomique 16S ciblant les bactéries rhizosphériques phytoprotectrices du genre Pseudomonas

Les Actes du BRG 2006; 6:197-209 link yes Nexterion Slide AL bacterial community; rhizosphere; soil disease suppressiveness; 16S taxonomic microarray; quantitative PCR

475 Sanguin H, Herrera A, Oger-Desfeux C, Dechesne A, Simonet P, Navarro E, Vogel TM, Moënne-Loccoz Y, Nesme X, Grundmann GL2006 Development and validation of a prototype 16S rRNA-based taxonomic microarray for Alphaproteobacteria

Environ Microbiol. 2006; 8(2):289-307 10.1111/j.1462-2920.2005.00895.x 16423016 no Nexterion Slide AL Nexterion Hyb

476 Sanguin H, Remenant B, Dechesne A, Thioulouse J, Vogel TM, Nesme X, Moënne-Loccoz Y, Grundmann GL2006 Potential of a 16S rRNA-based taxonomic microarray for analyzing the rhizosphere effects of maize on Agrobacterium spp. and bacterial communities

Appl Environ Microbiol. 2006; 72(6):4302-4312 10.1128/AEM.02686-05 16751545 yes Nexterion Slide AL

477 Schmidinger H, Susani-Etzerodt H, Birner-Gruenberger R, Hermetter A2006 Inhibitor and protein microarrays for activity-based recognition of lipolytic enzymes

Chembiochem. 2006; 7(3):527-534 10.1002/cbic.200500276 16470642 no Nexterion Slide H fluorescent probes; hydrolases; inhibitors; protein microarrays; small-molecule microarrays

478 Schweitzer B, Ball JA, Predki PF, Zhou XF, Michaud GA2006 Protein arrays and methods of use thereof United States Patent Application 20060223131 US20060223131 yes Nexterion Slide E479 Sohn K, Senyürek I, Fertey J, Königsdorfer A, Joffroy C, Hauser N, Zelt G, Brunner H, Rupp S2006 An in vitro assay to study the transcriptional response during adherence of

Candida albicans to different human epitheliaFEMS Yeast Res. 2006; 6(7):1085-1093 10.1111/j.1567-1364.2006.00130.x 17042758 yes Nexterion Slide A or A+ Candida albicans ; adherence; DNA

microarray; in vitro assay; Caco-2; A-431

480 Stevens J, Blixt O, Glaser L, Taubenberger JK, Palese P, Paulson JC, Wilson IA2006 Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities

J Mol Biol. 2006; 355(5):1143-1155 10.1016/j.jmb.2005.11.002 16343533 no Nexterion Slide H glycoarray; influenza; 1918 pandemic; hemagglutinin; receptor specificity

481 Stevens J, Blixt O, Paulson JC, Wilson IA2006 Glycan microarray technologies: tools to survey host specificity of influenza viruses

Nat Rev Microbiol. 2006; 4(11):857-864 10.1038/nrmicro1530 17013397 no Nexterion Slide H

482 Stypmann J, Janssen PM, Prestle J, Engelen MA, Kögler H, Lüllmann-Rauch R, Eckardt L, von Figura K, Landgrebe J, Mleczko A, Saftig P2006 LAMP-2 deficient mice show depressed cardiac contractile function without significant changes in calcium handling

Basic Res Cardiol. 2006; 101(4):281-291 10.1007/s00395-006-0591-6 16604439 no Nexterion Slide E contractile function; calcium; mechanotransduction; danon disease; LAMP-2

483 Taganov KD, Boldin MP, Chang KJ, Baltimore D2006 NF-kappaB-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses

Proc Natl Acad Sci U S A. 2006. 15;103(33):12481-12486 10.1073/pnas.0605298103 16885212 yes Nexterion Slide E immunity; microRNA; LPS; Toll-like receptor

484 ter Elst A, Hiemstra BE, van der Vlies P, Kamminga W, van der Veen AY, Davelaar I, Terpstra P, te Meerman GJ, Gerbens F, Kok K, Buys CH2006 Functional analysis of lung tumor suppressor activity at 3p21.3 Genes Chromosomes Cancer. 2006; 45(12):1077-1093 10.1002/gcc.20367 16958100 no Nexterion Slide E Nexterion Hyb

485 Thuerigen O, Schneeweiss A, Toedt G, Warnat P, Hahn M, Kramer H, Brors B, Rudlowski C, Benner A, Schuetz F, Tews B, Eils R, Sinn HP, Sohn C, Lichter P2006 Gene expression signature predicting pathologic complete response with gemcitabine, epirubicin, and docetaxel in primary breast cancer

J Clin Oncol. 2006; 24(12):1839-1845 10.1200/JCO.2005.04.7019 16622258 yes Nexterion Slide E

486 Urbina HD, Debaene F, Jost B, Bole-Feysot C, Mason DE, Kuzmic P, Harris JL, Winssinger N2006 Self-assembled small-molecule microarrays for protease screening and profiling

Chembiochem. 2006; 7(11):1790-1797 10.1002/cbic.200600242 17009273 no Nexterion Slide H, Nexterion Slide A+ MPX-16

combinatorial chemistry; microarrays; nucleic acids; proteases; proteomics

487 Walter JG, Stahl F, Reck M, Hollas M, Melzner D, Scheper T2006 Schwarze Nitrocellulose als Substrat für Protein Microarrays (Poster) Chem Ing Tech 2006; 78(9):1391 10.1002/cite.200650189 yes Nexterion Slide A or A+, Nexterion Slide E, Nexterion Slide H, Nexterion Slide NC

488 Warskulat U, Andrée B, Lüsebrink J, Köhrer K, Häussinger D2006 Switch from actin alpha1 to alpha2 expression and upregulation of biomarkers for pressure overload and cardiac hypertrophy in taurine-deficient mouse heart

Biol Chem. 2006; 387(10-11):1449-1454 10.1515/BC.2006.181 17081118 no Nexterion Spot II (discontinued)

compatible organic osmolytes; gene disruption; knockout mice; microarray

489 Was H, Cichon T, Smolarczyk R, Rudnicka D, Stopa M, Chevalier C, Leger JJ, Lackowska B, Grochot A, Bojkowska K, Ratajska A, Kieda C, Szala S, Dulak J, Jozkowicz A2006 Overexpression of heme oxygenase-1 in murine melanoma: increased proliferation and viability of tumor cells, decreased survival of mice

Am J Pathol. 2006; 169(6):2181-2198 10.2353/ajpath.2006.051365 17148680 yes Nexterion Slide E

490 Weston MD, Pierce ML, Rocha-Sanchez S, Beisel KW, Soukup GA2006 MicroRNA gene expression in the mouse inner ear Brain Res. 2006; 1111(1):95-104 10.1016/j.brainres.2006.07.006 16904081 no Nexterion Slide E cochlea; hair cell; inner ear; microRNA; RNA interference

491 Williams TD, Diab AM, George SG, Godfrey RE, Sabine V, Conesa A, Minchin SD, Watts PC, Chipman JK2006 Development of the GENIPOL European flounder (Platichthys flesus) microarray and determination of temporal transcriptional responses to cadmium at low dose

Environ Sci Technol. 2006; 40(20):6479-6488 10.1021/es061142h 17120584 no Nexterion Slide A

492 Wingren C, Borrebaeck CA2006 Antibody microarrays: current status and key technological advances OMICS. 2006; 10(3):411-427 10.1089/omi.2006.10.411 17069517 no Nexterion Slide H

493 Wingren C, Borrebaeck CA2006 Recombinant antibody microarrays - Key technological issues Screening. 2006; 2:13-15 link yes Nexterion Slide H

494 Abdo M, Irving B, Hudson P, Zola H2005 Development of a cluster of differentiation antibody-based protein microarray J Immunol Methods. 2005; 305(1):3-9 10.1016/j.jim.2005.07.008 16139293 no Nexterion Protein Labeling Kit (discontinued)

antibody microarray; inflammation; ELISA; c-reactive protein

495 Bahi A, Boyer F, Bussard G, Dreyer JL2005 Silencing dopamine D3-receptors in the nucleus accumbens shell in vivo induces changes in cocaine-induced hyperlocomotion

Eur J Neurosci. 2005; 21(12):3415-3426 10.1111/j.1460-9568.2005.04157.x 16026479 (no) Nexterion Slide AL addiction; cocaine; dopamine D3 receptor; drugs of abuse; in vivo gene transfer; lentivirus; plasticity; siRNA

496 Bahi A, Dreyer JL 2005 Cocaine-induced expression changes of axon guidance molecules in the adult rat brain

Mol Cell Neurosci. 2005; 28(2):275-291 10.1016/j.mcn.2004.09.011 15691709 (no) Nexterion Slide AL

497 Bochner BS, Alvarez RA, Mehta P, Bovin NV, Blixt O, White JR, Schnaar RL2005 Glycan array screening reveals a candidate ligand for Siglec-8 J Biol Chem. 2005; 280(6):4307-4312 10.1074/jbc.M412378200 15563466 yes Nexterion Slide H

498 Boverhof DR, Burgoon LD, Tashiro C, Chittim B, Harkema JR, Jump DB, Zacharewski TR2005 Temporal and dose-dependent hepatic gene expression patterns in mice provide new insights into TCDD-Mediated hepatotoxicity

Toxicol Sci. 2005; 85(2):1048-1063 10.1093/toxsci/kfi162 15800033 yes Nexterion Slide E TCDD; microarray; liver; mouse; temporal; dose response

499 Clarke J 2005 Microarrays - Solutions to the protein challenge BioTechniques. 2005; 38(1): 149-151 link yes Nexterion Slide MPX500 Dransfeld O, Gehrmann T, Köhrer K, Kircheis G, Holneicher C, Häussinger D, Wettstein M2005 Oligonucleotide microarray analysis of differential transporter regulation in the

regenerating rat liverLiver Int. 2005; 25(6):1243-1258 10.1111/j.1478-3231.2005.01158.x 16343078 (no) Nexterion Spot II

(discontinued)ASCT2; NKCC1; partial hepatectomy

501 Eady JJ, Wortley GM, Wormstone YM, Hughes JC, Astley SB, Foxall RJ, Doleman JF, Elliott RM2005 Variation in gene expression profiles of peripheral blood mononuclear cells from healthy volunteers

Physiol Genomics. 2005; 22(3):402-411 10.1152/physiolgenomics.00080.2005 16014386 yes Nexterion Slide E interindividual variation; microarray; transcriptomic

502 Egener T, Roulet E, Zehnder M, Bucher P, Mermod N2005 Proof of concept for microarray-based detection of DNA-binding oncogenes in cell extracts

Nucleic Acids Res. 2005; 33(8):e79 10.1093/nar/gni079 15891112 yes Nexterion Slide AL

503 Flachs P, Horakova O, Brauner P, Rossmeisl M, Pecina P, Franssen-van Hal N, Ruzickova J, Sponarova J, Drahota Z, Vlcek C, Keijer J, Houstek J, Kopecky J2005 Polyunsaturated fatty acids of marine origin upregulate mitochondrial biogenesis and induce beta-oxidation in white fat

Diabetologia. 2005; 48(11):2365-2375 10.1007/s00125-005-1944-7 16205884 yes Nexterion Slide E adipose tissue; carnitine palmitoyltransferase 1; fish oil; flax-seed oil; metabolism; mitochondria; n-3 polyunsaturated fatty acids; PGC-1; PPARGC1A

504 Fong CJ, Burgoon LD, Zacharewski TR2005 Comparative microarray analysis of basal gene expression in mouse Hepa-1c1c7 wild-type and mutant cell lines

Toxicol Sci. 2005; 86(2):342-353 10.1093/toxsci/kfi194 15888666 yes Nexterion Slide E benzo[a]pyrene; aryl hydrocarbon receptor; Hepa-1c1c7

505 Gissel C, Voolstra C, Doss MX, Koehler CI, Winkler J, Hescheler J, Sachinidis A2005 An optimized embryonic stem cell model for consistent gene expression and developmental studies: a fundamental study

Thromb Haemost. 2005; 94(4):719-727 10.1160/TH05–05–0338 16270623 yes Nexterion Slide H CGR8 embryonic stem cells; gene expression, microarrays; development

506 Gregersen PL, Brinch-Pedersen H, Holm PB2005 A microarray-based comparative analysis of gene expression profiles during grain development in transgenic and wild type wheat

Transgenic Res. 2005; 14(6):887-905 10.1007/s11248-005-1526-y 16315094 yes Nexterion Slide A+ Nexterion Spot, Nexterion Hyb

cDNA microarrays; gene expression; phytase; safety assessment; transgenic wheat

507 Guilleaume B, Buness A, Schmidt C, Klimek F, Moldenhauer G, Huber W, Arlt D, Korf U, Wiemann S, Poustka A2005 Systematic comparison of surface coatings for protein microarrays Proteomics. 2005; 5(18):4705-4712 10.1002/pmic.200401324 16267812 no Nexterion Slide AL, Nexterion Slide E, Nexterion Slide H

antibody microarrays; protein microarrays

508 Gutmann O, Kuehlewein R, Reinbold S, Niekrawietz R, Steinert CP, de Heij B, Zengerle R, Daub M2005 Fast and reliable protein microarray production by a new drop-in-drop technique

Lab Chip. 2005; 5(6):675-681 10.1039/b418765b 15915261 yes Nexterion Slide E

509 Gutmann O, Wintermantel MK, Niekrawietz R, de Heij B, Zengerle R, Daub M2005 Dispensing of cells for highly parallel production of living cell microarrays Transducers. 2005; 1(5-9):449-452 10.1109/SENSOR.2005.1496451 yes Nexterion Slide E cell dispensing; cell microarrays; EDC-NHS

510 Hohnjec N, Vieweg MF, Pühler A, Becker A, Küster H2005 Overlaps in the transcriptional profiles of Medicago truncatula roots inoculated with two different Glomus fungi provide insights into the genetic program activated during arbuscular mycorrhiza

Plant Physiol. 2005;137(4):1283-1301 10.1104/pp.104.056572 15778460 yes Nexterion Slide E Nexterion Block E

511 Hottes AK, Shapiro L, McAdams HH2005 DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus

Mol Microbiol. 2005; 58(5):1340-1353 10.1111/j.1365-2958.2005.04912.x 16313620 yes Nexterion Slide AL Nexterion Spot

512 Hsueh KC, Huang CM, Chen KJ, Hsu CH2005 Efficacy of autoantigen microarrays for detecting autoantibodies in patients with systemic lupus erythematosus

Mid Taiwan J Med. 2005; 10:131-137 link yes Nexterion Glass B or D autoantibodies; autoantigen microarray; systemic lupus erythematosus

513 Kok K, Dijkhuizen T, Swart YE, Zorgdrager H, van der Vlies P, Fehrmann R, te Meerman GJ, Gerssen-Schoorl KB, van Essen T, Sikkema-Raddatz B, Buys CH2005 Application of a comprehensive subtelomere array in clinical diagnosis of mental retardation

Eur J Med Genet. 2005; 48(3):250-262 10.1016/j.ejmg.2005.04.007 16179221 no Nexterion Slide E, Nexterion Slide E MPX-16

Nexterion Hyb array comparative genomic hybridisation; subtelomere array; subtelomeric rearrangements; mental retardation; multiple congenital anomalies

514 Kongstein OE, Bertocci U, Stafford GR2005 In situ stress measurements during copper electrodeposition on (111)-textured Au

J Electrochem Soc. 2005; 152(3):C116-C123 10.1149/1.1854093 no Nexterion Glass D copper; metallic thin films; electrodeposition; internal stresses; grain boundaries; adsorbed layers; stress relaxation; nucleation; voltammetry (chemical analysis); rain size

515 Korf U, Wiemann S 2005 Protein microarrays as a discovery tool for studying protein-protein interactions Expert Rev Proteomics. 2005; 2(1):13-26 10.1586/14789450.2.1.13 15966849 no Nexterion Slide H cDNA library; interaction; protein chip; protein domain; protein microarray; protein-protein; recombinant protein

516 Kufer SK, Dietz H, Albrecht C, Blank K, Kardinal A, Rief M, Gaub HE2005 Covalent immobilization of recombinant fusion proteins with hAGT for single molecule force spectroscopy

Eur Biophys J. 2005; 35(1):72-78 10.1007/s00249-005-0010-1 16160825 (no) Nexterion Slide AL molecular recognition; SPR; AFM; suicide coupler; hAGT; SNAP-tag

517 Kwekel JC, Burgoon LD, Burt JW, Harkema JR, Zacharewski TR2005 A cross-species analysis of the rodent uterotrophic program: elucidation of conserved responses and targets of estrogen signaling

Physiol Genomics. 2005; 23(3):327-342 10.1152/physiolgenomics.00175.2005 16174780 yes Nexterion Slide E uterotrophic assay; microarray; species comparison; ethynyl estradiol

518 Larkin JE, Frank BC, Gavras H, Sultana R, Quackenbush J2005 Independence and reproducibility across microarray platforms Nat Methods. 2005; 2(5):337-344 10.1038/nmeth757 15846360 (no) Nexterion Slide A

519 Lassman AB, Rossi MR, Raizer JJ, Abrey LE, Lieberman FS, Grefe CN, Lamborn K, Pao W, Shih AH, Kuhn JG, Wilson R, Nowak NJ, Cowell JK, DeAngelis LM, Wen P, Gilbert MR, Chang S, Yung WA, Prados M, Holland EC2005 Molecular study of malignant gliomas treated with epidermal growth factor receptor inhibitors: tissue analysis from North American Brain Tumor Consortium Trials 01-03 and 00-01

Clin Cancer Res. 2005; 11(21):7841-7850 10.1158/1078-0432.CCR-05-0421 16278407 yes Nexterion Slide A

520 Martinez-Ramirez A, Urioste M, Melchor L, Blesa D, Valle L, de Andres SA, Kok K, Calasanz MJ, Cigudosa JC, Benitez J2005 Analysis of myelodysplastic syndromes with complex karyotypes by high-resolution comparative genomic hybridization and subtelomeric CGH array

Genes Chromosomes Cancer. 2005; 42(3):287-298 10.1002/gcc.20154 15611930 no Nexterion Slide E Nexterion Hyb

521 Minderman H, Conroy JM, O'Loughlin KL, McQuaid D, Quinn P, Li S, Pendyala L, Nowak NJ, Baer MR.2005 In vitro and in vivo irinotecan-induced changes in expression profiles of cell cycle and apoptosis-associated genes in acute myeloid leukemia cells

Mol Cancer Ther. 2005; 4(6):885-900 10.1158/1535-7163.MCT-04-0048 15956246 yes Nexterion Slide A

522 Monecke S, Ehricht R2005 Rapid genotyping of methicillin-resistant Staphylococcus aureus (MRSA) isolates using miniaturised oligonucleotide arrays

Clin Microbiol Infect. 2005; 11(10):825-833 10.1111/j.1469-0691.2005.01243.x 16153257 yes Nexterion Spot, Nexterion Hyb

antimicrobial resistance; DNA array; epidemiology, microarray; MRSA; Staphylococcus aureus

523 Nowak NJ, Gaile D, Conroy JM, McQuaid D, Cowell J, Carter R, Goggins MG, Hruban RH, Maitra A2005 Genome-wide aberrations in pancreatic adenocarcinoma Cancer Genet Cytogenet. 2005; 161(1):36-50 10.1016/j.cancergencyto.2005.01.009 16080956 no Nexterion Slide A524 Pasquer F, Isidore E, Zarn J, Keller B2005 Specific patterns of changes in wheat gene expression after treatment with

three antifungal compoundsPlant Mol Biol. 2005; 57(5):693-707 10.1007/s11103-005-1728-y 15988564 no Nexterion Slide AL cDNA microarray; defence response;

gene expression pattern; plant protection products; Triticum aestivum

525 Perreten V, Vorlet-Fawer L, Slickers P, Ehricht R, Kuhnert P, Frey J2005 Microarray-based detection of 90 antibiotic resistance genes of gram-positive bacteria

J Clin Microbiol. 2005; 43(5):2291-2302 10.1128/JCM.43.5.2291–2302.2005 15872258 yes Nexterion Hyb

526 Piruska A, Nikcevic I, Lee SH, Ahn C, Heineman WR, Limbach PA, Seliskar CJ2005 The autofluorescence of plastic materials and chips measured under laser irradiation

Lab Chip. 2005; 5(12):1348-1354 10.1039/b508288a 16286964 yes Nexterion Glass B

527 Preininger C, Sauer U, Dayteg J, Pichler R2005 Optimizing processing parameters for signal enhancement of oligonucleotide and protein arrays on ARChip Epoxy

Bioelectrochemistry. 2005; 67(2):155-162 10.1016/j.bioelechem.2004.06.010 15886064 (no) Nexterion Spot, Nexterion Spot modified

biochip; microarray; signal enhancement; ARChip Epoxy

528 Raman R, Raguram S, Venkataraman G, Paulson JC, Sasisekharan R2005 Glycomics: an integrated systems approach to structure-function relationships of glycans

Nat Methods. 2005; 2(11):817-824 10.1038/nmeth807 16278650 (no) Nexterion Slide H

529 Rickert AM, Ballvora A, Matzner U, Klemm M, Gebhardt C2005 Quantitative genotyping of single-nucleotide polymorphisms by allele-specific oligonucleotide hybridization on DNA microarrays

Biotechnol Appl Biochem. 2005; 42(Pt 1):93-96 10.1042/BA20040177 15847606 (no) Nexterion Slide AL, Nexterion Slide E

allele-specific-oligonucleotide; DNA-microarray; locus; polyploidy; quantitative genotyping; single-nucleotide polymorphism

530 Riggi N, Cironi L, Provero P, Suvà ML, Kaloulis K, Garcia-Echeverria C, Hoffmann F, Trumpp A, Stamenkovic I2005 Development of Ewing's sarcoma from primary bone marrow-derived mesenchymal progenitor cells

Cancer Res. 2005; 65(24):11459-11468 10.1158/0008-5472.CAN-05-1696 16357154 yes not specified Nexterion slides

531 Rust R, Visser L, van der Leij J, Harms G, Blokzijl T, Deloulme JC, van der Vlies P, Kamps W, Kok K, Lim M, Poppema S, van den Berg A2005 High expression of calcium-binding proteins, S100A10, S100A11 and CALM2 in anaplastic large cell lymphoma

Br J Haematol. 2005; 131(5):596-608 10.1111/j.1365-2141.2005.05816.x 16351635 yes Nexterion Slide E 1q12–21 amplicon; ALCL; CALM2; S100A10; S100A11

532 Sachse K, Hotzel H, Slickers P, Ellinger T, Ehricht R.2005 DNA microarray-based detection and identification of Chlamydia and Chlamydophila spp

Mol Cell Probes. 2005; 19(1):41-50 10.1016/j.mcp.2004.09.005 15652219 no Nexterion Spot, Nexterion Hyb

DNA microarray technology; species identification; chlamydia; chlamydophila; clinical samples

533 Schlingemann J, Habtemichael N, Ittrich C, Toedt G, Kramer H, Hambek M, Knecht R, Lichter P, Stauber R, Hahn M2005 Patient-based cross-platform comparison of oligonucleotide microarray expression profiles

Lab Invest. 2005 Aug;85(8):1024-1039 10.1038/labinvest.3700293 16205657 yes Nexterion Slide E comparative study; expression profiling; head and neck cancer; oligonucleotide microarray;oligonucleotide probes; reproducibility of results; statistics and numerical data

534 Schlingemann J, Thuerigen O, Ittrich C, Toedt G, Kramer H, Hahn M, Lichter P2005 Effective transcriptome amplification for expression profiling on sense-oriented oligonucleotide microarrays

Nucleic Acids Res. 2005; 33(3):e29 10.1093/nar/gni029 15718295 yes Nexterion Slide E

535 Schlott T, Eiffert H, Bohne W, Landgrebe J, Brunner E, Spielbauer B, Knight B2005 Chlamydia trachomatis modulates expression of tumor suppressor gene caveolin-1 and oncogene C-myc in the transformation zone of non-neoplastic cervical tissue

Gynecol Oncol. 2005; 98(3):409-419 10.1016/j.ygyno.2005.04.034 16005053 no Nexterion Slide E Virtek Chip-Writer Pro (Bio-Rad), split pins (TeleChem)

536 Shingara J, Keiger K, Shelton J, Laosinchai-Wolf W, Powers P, Conrad R, Brown D, Labourier E2005 An optimized isolation and labeling platform for accurate microRNA expression profiling

RNA. 2005 Sep;11(9):1461-1470 10.1261/rna.2610405 16043497 yes Nexterion Slide E microRNA; miRNA; gene expression profile; oligonucleotide microarray; poly(A) polymerase

537 Sültmann H, von Heydebreck A, Huber W, Kuner R, Buness A, Vogt M, Gunawan B, Vingron M, Füzesí L, Poustka A2005 Gene expression in kidney cancer is associated with cytogenetic abnormalities, metastasis formation, and patient survival

Clin Cancer Res. 2005; 11(2 Pt 1):646-655 link 15701852 yes Nexterion Slides

538 Swiderek H, Claus H, Frosch M, Vogel U.2005 Evaluation of custom-made DNA microarrays for multilocus sequence typing of Neisseria meningitidis

Int J Med Microbiol. 2005; 295(1):39-45 10.1016/j.ijmm.2004.12.005 15861815 no Nexterion Slide E Nexterion Spot II (discontinued)

Neisseria meningitidis; typing; DNA microarrays; MLST

539 Szemes M, Bonants P, de Weerdt M, Baner J, Landegren U, Schoen CD2005 Diagnostic application of padlock probes - multiplex detection of plant pathogens using universal microarrays

Nucleic Acids Res. 2005; 33(8):e70 10.1093/nar/gni069 15860767 yes Nexterion Slide E MPX-16

540 Tateno H, Crocker PR, Paulson JC2005 Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6'-sulfo-sialyl Lewis X as a preferred glycan ligand

Glycobiology. 2005; 15(11):1125-1135 10.1093/glycob/cwi097 15972893 yes Nexterion Slide H 6•-sulfo-sialyl-Lewis X; eosinophils; functionally; convergent paralog; Siglec-8; Siglec-F

541 Tomic V, Russwurm S, Möller E, Claus RA, Blaess M, Brunkhorst F, Bruegel M, Bode K, Bloos F, Wippermann J, Wahlers T, Deigner HP, Thiery J, Reinhart K, Bauer M2005 Transcriptomic and proteomic patterns of systemic inflammation in on-pump and off-pump coronary artery bypass grafting

Circulation. 2005; 112(19):2912-2920 10.1161/CIRCULATIONAHA.104.531152 16275880 yes Nexterion Slide E immunology; cardiopulmonary bypass; inflammation: leukocytes; molecular biology

542 Tong M, Jacobi CE, van de Rijke FM, Kuijper S, van de Werken S, Lowary TL, Hokke CH, Appelmelk BJ, Nagelkerke NJ, Tanke HJ, van Gijlswijk RP, Veuskens J, Kolk AH, Raap AK2005 A multiplexed and miniaturized serological tuberculosis assay identifies antigens that discriminate maximally between TB and non-TB sera

J Immunol Methods. 2005; 301(1-2):154-163 10.1016/j.jim.2005.04.004 15979638 no Nexterion Slide E tuberculosis; serology; microarray; multiplexing; multi-variant analysis; ROC analysis

543 Wang Z, Lee J, Cossins AR, Brust M2005 Microarray-based detection of protein binding and functionality by gold nanoparticle probes

Anal Chem. 2005; 77(17):5770-5774 10.1021/ac050679v 16131095 no Nexterion Slide AL, Nexterion Slide H

544 Westra JL, Boven LG, van der Vlies P, Faber H, Sikkema B, Schaapveld M, Dijkhuizen T, Hollema H, Buys CH, Plukker JT, Kok K, Hofstra RM2005 A substantial proportion of microsatellite-unstable colon tumors carry TP53 mutations while not showing chromosomal instability

Genes Chromosomes Cancer. 2005; 43(2):194-201 10.1002/gcc.20148 15729700 no Nexterion Slide E Nexterion Hyb

545 Xia B, Kawar ZS, Ju T, Alvarez RA, Sachdev GP, Cummings RD2005 Versatile fluorescent derivatization of glycans for glycomic analysis Nat Methods. 2005; 2(11):845-850 10.1038/nmeth808 16278655 no Nexterion Slide H

546 Zhang L, Hurek T, Reinhold-Hurek B2005 Position of the fluorescent label is a crucial factor determining signal intensity in microarray hybridizations

Nucleic Acids Res. 2005; 33(19):e166 10.1093/nar/gni156 16257977 yes Nexterion Slide A+

547 Zieker D, Fehrenbach E, Dietzsch J, Fliegner J, Waidmann M, Nieselt K, Gebicke-Haerter P, Spanagel R, Simon P, Niess AM, Northoff H2005 cDNA microarray analysis reveals novel candidate genes expressed in human peripheral blood following exhaustive exercise

Physiol Genomics. 2005; 23(3):287-294 10.1152/physiolgenomics.00096.2005 16118270 yes Nexterion Slide A+ thioredoxin; CD81; oxidative; marathon

548 Zielinski B, Gratias S, Toedt G, Mendrzyk F, Stange DE, Radlwimmer B, Lohmann DR, Lichter P2005 Detection of chromosomal imbalances in retinoblastoma by matrix-based comparative genomic hybridization


549 Bahi A, Boyer F, Gumy C, Kafri T, Dreyer JL2004 In vivo gene delivery of urokinase-type plasminogen activator with regulatable lentivirus induces behavioural changes in chronic cocaine administration

Eur J Neurosci. 2004; 20(12):3473-3488 10.1111/j.1460-9568.2004.03771.x 15610180 no Nexterion Slide AL addiction; drugs of abuse; lentivirus plasticity; rat; serine proteases

550 Blank K, Lankenau A, Mai T, Schiffmann S, Gilbert I, Hirler S, Albrecht C, Benoit M, Gaub HE, Clausen-Schaumann H2004 Double-chip protein arrays: force-based multiplex sandwich immunoassays with increased specificity

Anal Bioanal Chem. 2004; 379(7-8):974-981 10.1007/s00216-004-2607-0 15103448 no Nexterion Slide AL sandwich immunoassay; protein array; cytokine; specificity; cross-reactivity; multi-analyte

551 Blixt O, Head S, Mondala T, Scanlan C, Huflejt ME, Alvarez R, Bryan MC, Fazio F, Calarese D, Stevens J, Razi N, Stevens DJ, Skehel JJ, van Die I, Burton DR, Wilson IA, Cummings R, Bovin N, Wong CH, Paulson JC2004 Printed covalent glycan array for ligand profiling of diverse glycan binding proteins

Proc Natl Acad Sci U S A. 2004; 101(49):17033-17038 10.1073/pnas.0407902101 15563589 yes Nexterion Slide H carbohydrate; lectin; microarray; glycoprotein; glycolipid

552 Boverhof DR, Fertuck KC, Burgoon LD, Eckel JE, Gennings C, Zacharewski TR2004 Temporal- and dose-dependent hepatic gene expression changes in immature ovariectomized mice following exposure to ethynyl estradiol

Carcinogenesis. 2004; 25(7):1277-1291 10.1093/carcin/bgh114 14976129 yes Nexterion Slide E

553 Boverhof DR, Tam E, Harney AS, Crawford RB, Kaminski NE, Zacharewski TR2004 2,3,7,8-Tetrachlorodibenzo-p-dioxin induces suppressor of cytokine signaling 2 in murine B cells

Mol Pharmacol. 2004; 66(6):1662-1670 10.1124/mol.104.002915 15371557 yes Nexterion Slide E

554 Conzone, SD, Pantano CG2004 Glass slides to DNA microarrays Material today. 2004; 7(3):20-26 10.1016/S1369-7021(04)00122-1 yes Nexterion Glass B555 Conzone, SD, Redkar, R.J2004 Reproducible, low cost arraying achieved with a multiplexed approach European Pharmaceutical Review. 2004; 1:52-55 no MPX

556 Conzone, SD, Redkar, R.J2004 Reproducible multiplexed microarray approach Genetic Engineering News. 2004; 26 no MPX557 de Fourmestraux V, Neubauer H, Poussin C, Farmer P, Falquet L, Burcelin R, Delorenzi M, Thorens B2004 Transcript profiling suggests that differential metabolic adaptation of mice to a

high fat diet is associated with changes in liver to muscle lipid fluxesJ Biol Chem. 2004; 279(49):50743-50753 10.1074/jbc.M408014200 15377667 yes Nexterion Slide AL

558 Esposito I, Bauer A, Hoheisel JD, Kleeff J, Friess H, Bergmann F, Rieker RJ, Otto HF, Kloppel G, Penzel R2004 Microcystic tubulopapillary carcinoma of the pancreas: a new tumor entity? Virchows Arch. 2004; 444(5):447-453 10.1007/s00428-004-0984-6 15014986 no Nexterion Slide E pancreas; microarray analysis; DPC4/SMAD4; beta-catenin; p16INK4A

559 Földes-Papp Z, Egerer R, Birch-Hirschfeld E, Striebel HM, Demel U, Tilz GP, Wutzler P2004 Detection of multiple human herpes viruses by DNA microarray technology Mol Diagn. 2004; 8(1):1-9 link 15230636 no Nexterion Slide E herpesvirus infections, diagnosis; diagnostic tests

560 Gong P, Grainger DW2004 Comparison of DNA immobilization efficiency on new and regenerated commercial amine reactive polymer microarray surfaces

Surf Sci. 2004; 570(1-2):67-77 10.1016/j.susc.2004.06.181 (no) Nexterion Slide H biological molecules - nucleic acids; biological molecules - proteins; surface chemical reaction

561 Gutmann O, Niekrawietz R, Kuehlewein R, Steinert CP, Reinbold S, De Heij B, Daub M, Zengerle R2004 Non-contact production of oligonucleotide microarrays using the highly integrated TopSpot nanoliter dispenser

Analyst. 2004; 129(9):835-840 10.1039/b408625m 15343399 yes Nexterion Slide E

562 Held M, Gase K, Baldwin IT2004 Microarrays in ecological research: a case study of a cDNA microarray for plant-herbivore interactions

BMC Ecol. 2004; 4:13 10.1186/1472-6785-4-13 15350208 yes Nexterion Slide E

563 Krol E, Becker A 2004 Global transcriptional analysis of the phosphate starvation response in Sinorhizobium meliloti strains 1021 and 2011

Mol Genet Genomics. 2004; 272(1):1-17 10.1007/s00438-004-1030-8 15221452 yes Nexterion Slide E Nexterion Block E phosphorus; starvation; adaptation; gene regulation

564 Kühner F, Costa LT, Bisch PM, Thalhammer S, Heckl WM, Gaub HE2004 LexA-DNA bond strength by single molecule force spectroscopy Biophys J. 2004; 87(4):2683-2690 10.1529/biophysj.104.048868 15454462 yes Nexterion Slide A+

565 Linnell J, Mott R, Field S, Kwiatkowski DP, Ragoussis J, Udalova IA2004 Quantitative high-throughput analysis of transcription factor binding specificities Nucleic Acids Res. 2004; 32(4):e44 10.1093/nar/gnh042 14990752 yes Nexterion Slide AL, Nexterion Slide E

566 Lou Y, Baldwin IT 2004 Nitrogen supply influences herbivore-induced direct and indirect defenses and transcriptional responses in Nicotiana attenuata

Plant Physiol. 2004; 135(1):496-506 10.1104/pp.104.040360 15133153 yes Nexterion Slide E

567 Niehus E, Gressmann H, Ye F, Schlapbach R, Dehio M, Dehio C, Stack A, Meyer TF, Suerbaum S, Josenhans C2004 Genome-wide analysis of transcriptional hierarchy and feedback regulation in the flagellar system of Helicobacter pylori

Mol Microbiol. 2004; 52(4):947-961 10.1111/j.1365-2958.2004.04006.x 15130117 no Nexterion Slide E Nexterion Spot II (discontinued)

568 Osaki T, Zimmermann R, Kratzmüller T, Schweiss R, Werner C2004 Polyanion protection of silane bonds to silicon oxide revealed by electrokinetic measurements

Langmuir. 2004; 20(2):524-527 10.1021/la0354943 15743099 no Nexterion Glass B

569 Panse S, Dong L, Burian A, Carus R, Schutkowski M, Reimer U, Schneider-Mergener J2004 Profiling of generic anti-phosphopeptide antibodies and kinases with peptide microarrays using radioactive and fluorescence-based assays

Mol Divers. 2004; 8(3):291-299 10.1023/B:MODI.0000036240.39384.eb 15384422 no Nexterion Slide AL antibody profiling; anti-phosphopeptide antibodies; assay developement; kinase substrate profiling; peptide microarray

570 Preininger C, Sauer U, Kern W, Dayteg J2004 Photoactivatable copolymers of vinylbenzyl thiocyanate as immobilization matrix for biochips

Anal Chem. 2004; 76(20):6130-6136 10.1021/ac0499468 15481963 no Nexterion Spot, Nexterion Spot modified

571 Sanchez-Cabo F, Prokesch A, Thallinger GG, Pieler R, Trajanoskie Z,2004 Assessing the efficiency of dyeswap normalization to remove systematic bias from two-color microarray data

Appl Bioinformatics. 2004 (?) link yes Nexterion Slide A+, Nexterion Slide AL, Nexterion Slide E

two-color microarrays; normalization; LOWESS, dye-swap; replicates

572 Schmidt DD, Kessler A, Kessler D, Schmidt S, Lim M, Gase K, Baldwin IT2004 Solanum nigrum: a model ecological expression system and its tools Mol Ecol. 2004; 13(5):981-995 10.1111/j.1365-294X.2004.02111.x 15078438 yes Nexterion Slide E Agrobacterium-mediated transformation; herbivore-induced volatile production; indirectand direct defences; oligonucleotide microarray; plant fitness; proteinase inhibitor

573 Sieber SA, Mondala TS, Head SR, Cravatt BF2004 Microarray platform for profiling enzyme activities in complex proteomes J Am Chem Soc. 2004; 126(48):15640-15641 10.1021/ja044286 15571375 (no) Nexterion Slide H

574 Sobek J, Schlapbach R2004 Substrate architecture and functionality defining the properties and performance of DNA, peptide, protein and carbohydrate microarrays

Pharmagenomics. 2004; 32-44 no Nexterion Slide A+ or A, Nexterion Slide AL, Nexterion Slide E, Nexterion Slide H

575 Striebel HM, Birch-Hirschfeld E, Egerer R, Foldes-Papp Z, Tilz GP, Stelzner A2004 Enhancing sensitivity of human herpes virus diagnosis with DNA microarrays using dendrimers

Exp Mol Pathol. 2004; 77(2):89-97 10.1016/j.yexmp.2004.05.004 15351231 no Nexterion Slide E human herpes virus; DNA microarrays; dendrimers

576 Striebel HM, Schellenberg P, Grigaravicius P, Greulich KO2004 Readout of protein microarrays using intrinsic time resolved UV fluorescence for label-free detection

Proteomics. 2004; 4(6):1703-1711 10.1002/pmic.200300705 15174139 no Nexterion Slide A+ fluorescence lifetime measurement; label-free detection; protein intrinsic fluorescence; protein microarrays; protein-protein interaction

577 Sun YV, Boverhof DR, Burgoon LD, Fielden MR, Zacharewski TR2004 Comparative analysis of dioxin response elements in human, mouse and rat genomic sequences

Nucleic Acids Res. 2004; 32(15):4512-4523 10.1093/nar/gkh782 15328365 yes Nexterion Slide E

578 Tchinda J, Dijkhuizen T, Vlies Pv P, Kok K, Horst J2004 Translocations involving 6p22 in acute myeloid leukaemia at relapse: breakpoint characterization using microarray-based comparative genomic hybridization

Br J Haematol. 2004; 126(4):495-500 10.1111/j.1365-2141.2004.05082.x 15287941 yes Nexterion Slide E Nexterion Hyb acute myeloid leukaemia; FRA6C (6p22); array comparative genomic hybridization

579 Voelckel C, Baldwin T2004 Herbivore-induced plant vaccination. Part II. Array-studies reveal the transience of herbivore-specific transcriptional imprints and a distinct imprint from stress combinations

Plant J. 2004; 38(4):650-663 10.1111/j.1365-313X.2004.02077.x 15125771 yes Nexterion Slide E Tupiocoris notatus; Manduca sexta ; Nicotiana attenuata; microarray; PCA; erasability

580 Voelckel C, Baldwin T2004 Generalist and specialist lepidopteran larvae elicit different transcriptional responses in Nicotiana attenuata, which correlate with larval FAC profiles

Ecol Lett. 2004; 7(9):770-775 10.1111/j.1461-0248.2004.00633.x no Nexterion Slide E elicitors; fatty acid–amino acid conjugates; induced plant defence; noctuidae; sphingidae

581 Affara NA 2003 Resource and hardware options for microarray-based experimentation Brief Funct Genomic Proteomic. 2003; 2(1):7-20 10.1093/bfgp/2.1.7 15239939 yes Nexterion Slide A+, Nexterion Slide AL, Nexterion Slide E

microarray; robots; printing; substrates; scanners; data capture

582 Albrecht C, Blank K, Lalic-Multhaler M, Hirler S, Mai T, Gilbert I, Schiffmann S, Bayer T, Clausen-Schaumann H, Gaub HE2003 DNA: a programmable force sensor Science. 2003; 301(5631):367-370 10.1126/science.1084713 12869761 yes Nexterion Slide A+583 Blank K, Mai T, Gilbert I, Schiffmann S, Rankl J, Zivin R, Tackney C, Nicolaus T, Spinnler K, Oesterhelt F, Benoit M, Clausen-Schaumann H, Gaub HE2003 A force-based protein biochip Proc Natl Acad Sci U S A. 2003; 100(20):11356-11360 10.1073/pnas.1934928100 12975526 yes Nexterion Slide E584 Bonenberger J, Hagenmaier S, Polackova J, von Kampen J2003 Method for detecting analytes United States Patent Application 20060223060 US20060223060 yes Nexterion Slide AL, Nexterion

Slide E585 Cheran LE, Vukovich D, Thompson M2003 Imaging TOF-SIMS analysis of oligonucleotide microarrays Analyst. 2003; 128(2):126-129 10.1039/b209827j 12625550 yes Nexterion Slide E Nexterion Spot, Nexterion

Block E586 Dobrowolski SF, Lin Z2003 Newborn screening for hemoglobinopathy by DNA microarray analysis United States Patent Application 20030124581 US20030124581 yes Nexterion Hyb

587 Halitschke R, Gase K, Hui D, Schmidt DD, Baldwin IT2003 Molecular interactions between the specialist herbivore Manduca sexta (lepidoptera, sphingidae) and its natural host Nicotiana attenuata. VI. Microarray analysis reveals that most herbivore-specific transcriptional changes are mediated by fatty acid-amino acid conjugates

Plant Physiol. 2003; 131(4):1894-1902 10.1104/pp.102.018184 12692348 yes Nexterion Slide E Nexterion Spot

588 Hild M, Beckmann B, Haas SA, Koch B, Solovyev V, Busold C, Fellenberg K, Boutros M, Vingron M, Sauer F, Hoheisel JD, Paro R2003 An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome

Genome Biol. 2003; 5(1):R3 10.1186/gb-2003-5-1-r3 14709175 yes Nexterion Slide A+

589 Izaguirre MM, Scopel AL, Baldwin IT, Ballare CL2003 Convergent responses to stress. Solar ultraviolet-B radiation and Manduca sexta herbivory elicit overlapping transcriptional responses in field-grown plants of Nicotiana longiflora

Plant Physiol. 2003; 132(4):1755-1767 10.1104/pp.103.024323 12913133 yes Nexterion Slide E

590 Kusnezow W, Jacob A, Walijew A, Diehl F, Hoheisel JD2003 Antibody microarrays: an evaluation of production parameters Proteomics. 2003; 3(3):254-264 10.1002/pmic.200390038 12627378 no Nexterion Slide E antibody; cross-linker; glass slide; microarrays; surface modification

591 Le Berre V, Trévisiol E, Dagkessamanskaia A, Sokol S, Caminade AM, Majoral JP, Meunier B, François J2003 Dendrimeric coating of glass slides for sensitive DNA microarrays analysis Nucleic Acids Res. 2003 Aug 15;31(16):e88 link 12907740 yes Nexterion Slide A+

592 Monecke S, Leube I, Ehricht R2003 Simple and robust array-based methods for the parallel detection of resistance genes of staphylococcus aureus

Genome Lett. 2003; 2:106-118 10.1166/gl.2003.029 (no) Nexterion Spot, Nexterion Hyb

DNA Array; Staphylococcus aureus; antimicrobial resistance

593 Schlingemann J, Hess J, Wrobel G, Breitenbach U, Gebhardt C, Steinlein P, Kramer H, Furstenberger G, Hahn M, Angel P, Lichter P2003 Profile of gene expression induced by the tumour promotor TPA in murine epithelial cells

Int J Cancer. 2003; 104(6):699-708 10.1002/ijc.11008 12640676 yes Nexterion Slide E expression profiling; microarray; skin carcinogenesis; SSH; tumour promoter

594 Spiess AN, Mueller N, Ivell R2003 Amplified RNA degradation in T7-amplification methods results in biased microarray hybridizations

BMC Genomics. 2003; 4(1):44 10.1186/1471-2164-4-44 14606961 yes Nexterion Slide E Nexterion Block E, Nexterion Hyb

595 Striebel HM, Birch-Hirschfeld E, Egerer R, Foldes-Papp Z2003 Virus diagnostics on microarrays Curr Pharm Biotechnol. 2003; 4(6):401-415 10.2174/1389201033377274 14683434 no Nexterion Glass B, Nexterion Glass D

virus diagnostics; DNA microarrays; on-chip synthesis; chemical oligonucleotide synthesis; DNA immobilization chemistry; dendrimers; probe specifity; fluorescence detection

596 Taylor S, Smith S, Windle B, Guiseppi-Elie A2003 Impact of surface chemistry and blocking strategies on DNA microarrays Nucleic Acids Res. 2003; 31(16):e87 link 12907739 yes Nexterion Glass D

597 Toegl A, Kirchner R, Gauer C, Wixforth A2003 Enhancing results of microarray hybridizations through microagitation J Biomol Tech. 2003; 14(3):197-204 link 13678150 yes Nexterion Slide E biochip; microagitation; microarray; hybridization; ArrayBooster

598 Wrobel G, Schlingemann J, Hummerich L, Kramer H, Lichter P, Hahn M2003 Optimization of high-density cDNA-microarray protocols by 'design of experiments'

Nucleic Acids Res. 2003; 31(12):e67 link 12799456 yes Nexterion Slide AL, Nexterion Slide E

Nexterion Spot

599 Blossey R, Bosio A 2001 Contact line deposits on cDNA microarrays: a "twin-spot effect" Langmuir. 2002; 18(7):2952-2954 10.1021/la0114732 no Nexterion Glass B

600 Iida K, Nishimura I 2002 Gene expression profiling by DNA microarray technology Crit Rev Oral Biol Med. 2002; 13(1):35-50 10.1177/154411130201300105 12097236 yes Nexterion Slide E DNA microarray; oligonucleotide; gene expression; oral biology; post-genomics

601 Kusnezow W, Hoheisel JD2002 Antibody microarrays: promises and problems Biotechniques. 2002; Suppl:14-23 link 12514925 yes Nexterion Slides602 Lizcano JM, Deak M, Morrice N, Kieloch A, Hastie CJ, Dong L, Schutkowski M, Reimer U, Alessi DR.2002 Molecular basis for the substrate specificity of NIMA-related kinase-6 (NEK6).

Evidence that NEK6 does not phosphorylate the hydrophobic motif of ribosomal S6 protein kinase and serum- and glucocorticoid-induced protein kinase in vivo

J Biol Chem. 2002; 277(31):27839-27849 10.1074/jbc.M202042200 12023960 yes Nexterion Slide AL

603 Chiem NH, Harrison DJ1998 Microchip systems for immunoassay: an integrated immunoreactor with electrophoretic separation for serum theophylline determination

Clin Chem. 1998; 44(3):591-598 link 9510867 yes Nexterion Glass B

604 Simpson PC, Woolley AT, Mathies RA1998 Microfabrication technology for the production of capillary array electrophoresis chips

Biomed Microdevices. 1998; 1(1):7-26 10.1023/A:1009922004301 (no) Nexterion Glass B, Nexterion Glass D

DNA analysis; capillary array ; electrophoresis; confocal fluorescence detection; multiplex sample injection, glass micromachining; capillary electrophoresis chips