primary metabolism

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PRIMARY METABOLISM

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Page 1: primary metabolism

PRIMARY METABOLISM

Page 2: primary metabolism
Page 3: primary metabolism

FUNCTIONS OF METABOLISM

ANABOLIC• Change nutrients into structural and

functional components of the organism

CATABOLIC • Extract chemical energy or nutrient

element such as N and S from complex nutrients to provide E and materials for anabolic reactions

Page 4: primary metabolism

Anabolism depends on catabolism for E in the form of NADH, ATP and NADPH.

Also for the production of key intermediates for functional macromolecules synthesis

Page 5: primary metabolism

Primary Metabolism

The metabolic events that are important to functions of fungus in pure culture

Page 6: primary metabolism

Secondary metabolism coextensive with primary metabolism

The division into primary and secondary depends on the distribution of the metabolites among the organisms.

Eg of metabolites?Organic acid, vitamin, antibiotics etc.

Page 7: primary metabolism

Carbon and Energy Metabolism Glucose metabolism Non-carbohydrates function as sole

sources of C, must be convertable to glucose by a process called gluconeogenesis

Provide precursors for cell wall , glycoproteins and other materials derived directly from hexoses.

Page 8: primary metabolism

Glycolysis

Glycolysis:

the breakdown of glucose by enzymes, releasing energy and pyruvic acid

3 pathways for hexoses:

1. EM (Embden-Meyerhof-Parnas)2. HM (Hexose monophosphate )3. ED (Entner-Doudoroff)

Page 9: primary metabolism

Glycolysis of Pentoses

2 pathways:1. XP (xylitol pathway)2. PK (phosphoketolase pathway)

EM, HM and XP pathways are universal in fungi

PK widespread among yeasts ED – only for Tilletia caries and

Caldariomyces fumago

Page 10: primary metabolism
Page 11: primary metabolism

Although EM and HM pathways lead through G3P to pyruvate but different metabolic functions.

EM uses NAD as electron acceptor. HM leads to the reduction of NADP to

NADPH. There are other sources of reduced

NADP for biosynthetic purposes besides HM pathway.

Page 12: primary metabolism

Fermentation

Regeneration of NAD by the transfer of electrons from NADH to an organic electron acceptor generated by the metabolism of the foodstuff.

In fungi this electron acceptor is pyruvate

Page 13: primary metabolism

Types of Fermentation

1. Alcoholic 2. Lactic acid 3. Mixed acid fermentation

Pyruvic acid as electron acceptor

Page 14: primary metabolism

ALCOHOLIC FERMENTATION

Pyruvate to ethanol and CO2 Saccharomyces

Aspergillus, Fusarium and Mucor are well known for this ability but obligate aerobes.

Page 15: primary metabolism

LACTIC ACID FERMENTATION

Found primarily in Chytridomycetes, Oomycetes and Zygomycetes

Rhizopus, a member of Zygomycete, carry out lactic acid fermentation together with alcoholic fermentation.

Page 16: primary metabolism

Mixed Acid Fermentation

Found in a small group of Chytridiomycetes

Similar to mixed acid fermentation of Enterobacteriaceae with acetate, lactate, formate, ethanol, methane, CO2 and H2 as end products.

Page 17: primary metabolism

RESPIRATION

In fungi is similar to that in other organisms.

3 interdependent processes1. Citric acid cycle2. Electron transport3. Oxidative phosphorylation

Mitochondrion: center of respiration

Page 18: primary metabolism

TCA is a central hub of both catabolic and anabolic metabolism.

• ETC – 2nd critical process in respiration

Page 19: primary metabolism

ALTERNATIVE RESPIRATION

2 alternate pathways of electron transport that are distinct from the cytochrome path.

Differ from the cytochrome path in being insensitive to cyanide and sensitive to either salycil hydroxamate (SHAM) or azide.

Page 20: primary metabolism

• SHAM-sensitive pathway accepts electrons as the level of ubiquinol and transports them to O2 without proton transport

Without phosphorylation of ADP.

Azide-sensitive pathway also lack proton transport capability.

The alternative pathways are readily demonstrable when the normal pathway is blocked or limited.

Page 21: primary metabolism

ENERGY METABOLISM OF FUNGIGroup Name

Respiration

Fermentation

Anaerobicgrowth

Fungi

Obligaterespirers

Yes No No Many yeasts and mostfilamentous fungi

Aerobicrespirers

Yes Anaerobic inpregrowncells

No A few yeasts andfilamentous fungi

Aerobicfermentors

Limited Aerobic andAnaerobic

No Schizosaccharomycespombe and otheryeasts

Facultativeaerobicfermentors

Limited Aerobic andAnaerobic

Facultative

Saccharomycescerevisiae

Obligateanaerobes

Absent Anaerobic Obligate RumenChytridiomycetes

Page 22: primary metabolism

OTHER DEGRADATIVE PATHWAYS Serve several functions:1. Release of NH4 for reutilization2. Provision of carbon metabolites

utilizable as C and E sources3. Detoxification of inhibitory

compounds

Example: degradation of amino acids, purines and pyrimidines.

Page 23: primary metabolism

GLUCONEOGENESIS

Required f o r growth on noncarbohydrate carbon sources

Involves substrates closely related to the EM pathway and requires the reversal of this process.

general property of fungi.