powerpoint lecture presentations prepared by bradley … · © 2016 pearson education, inc. big...
TRANSCRIPT
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PowerPoint® Lecture
Presentations prepared by
Bradley W. Christian,
McLennan Community
College
C H A P T E R
© 2016 Pearson Education, Inc.
Microbial
Genetics
8
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Genetics
• Genetics - the science of heredity
• Central dogma of molecular biology
• Mutations
• Gene expression controlled by operons
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Big Picture pg. 202 (2 of 9).
Reovirus and retrovirus
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Big Picture pg. 202 (3 of 9).
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Big Picture pg. 202 (6 of 9).
An inducible operon includes genes that are in the "off" mode
with the repressor bound to the DNA, and is turned "on" by the
environmental inducer.
"OFF" (gene
not expressed)
"ON" (gene
expressed) DNA
DNA
Active
repressor
Inducer
Inactive
repressor
A repressible operon includes genes that are in the "on"
mode, without the repressor bound to the DNA, and is turned
"off" by the environmental corepressor and repressor.
Inactive
repressor
Active
repressor
DNA
DNA
Corepressor
"ON" (gene
expressed)
"OFF" (gene
not expressed)
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Big Picture: Genetics
• Alteration of bacterial genes and gene expression
• Cause of disease
• Prevent disease treatment
• Manipulated for human benefit
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Structure and Function of the Genetic Material
• Genetics: the study of genes, how they carry
information, how information is expressed, and
how genes are replicated
• Chromosomes: structures containing DNA that
physically carry hereditary information; the
chromosomes contain genes
• Genes: segments of DNA that encode functional
products, usually proteins
• Genome: all the genetic information in a cell
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Structure and Function of the Genetic Material
• The genetic code is a set of rules that determines
how a nucleotide sequence is converted to an
amino acid sequence of a protein
• Central dogma:
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Genotype and Phenotype
• Genotype: the genetic makeup of an organism
• Phenotype: expression of the genes
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DNA and Chromosomes
• Bacteria usually have a single circular
chromosome made of DNA and associated
proteins
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Chromosome
Figure 8.1 A prokaryotic chromosome.
Chromosome
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The Flow of Genetic Information
• Vertical gene transfer: flow of genetic information
from one generation to the next
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Figure 8.2 The Flow of Genetic Information.
Parent cell
DNA
Genetic information is used
within a cell to produce the
proteins needed for the cell
to function.
Genetic information can be
transferred horizontally between
cells of the same generation.
Genetic information can be
transferred vertically to the
next generation of cells.
New combinations
of genes
Translation
Cell metabolizes and grows Recombinant cell Offspring cells
Transcription
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DNA Replication
• DNA forms a double helix
• "Backbone" consists of deoxyribose-phosphate
• Two strands of nucleotides are held together by
hydrogen bonds between A-T and C-G
• Strands are antiparallel
• Order of the nitrogen-containing bases forms the
genetic instructions of the organism
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Figure 8.3b DNA replication.
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DNA Replication
• One strand serves as a template for the
production of a second strand
• Topoisomerase and gyrase relax the strands
• Helicase separates the strands
• A replication fork is created
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Figure 8.3a DNA replication.
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DNA Replication
• DNA polymerase adds nucleotides to the growing
DNA strand
• In the 5' 3' direction
• Initiated by an RNA primer
• Leading strand is synthesized continuously
• Lagging strand is synthesized discontinuously, creating
Okazaki fragments
• DNA polymerase removes RNA primers; Okazaki
fragments are joined by the DNA polymerase and DNA
ligase
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Figure 8.5 A summary of events at the DNA replication fork.
REPLICATION
Proteins stabilize the
unwound parental DNA.
The leading strand is
synthesized continuously
by DNA polymerase.
DNA polymerase
Enzymes unwind the
parental double
helix.
Primase
Parental
strand
The lagging strand is
synthesized discontinuously.
Primase, an RNA polymerase,
synthesizes a short RNA primer,
which is then extended by
DNA polymerase.
DNA polymerase
digests RNA primer
and replaces it with DNA.
DNA ligase joins
the discontinuous
fragments of the
lagging strand.
DNA
polymerase
DNA polymerase
Okazaki fragment DNA ligase
RNA primer
Replication
fork
3'
5'
5'
3'
3'
5'
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DNA Replication
• Energy for replication is supplied by nucleotides
• Hydrolysis of two phosphate groups on ATP
provides energy
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Figure 8.4 Adding a nucleotide to DNA.
New
Strand
Template
Strand
Sugar
Phosphate
When a nucleoside
triphosphate bonds
to the sugar, it loses
two phosphates.
Hydrolysis of the
phosphate bonds
provides the energy
for the reaction.
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DNA Replication
• Most bacterial DNA replication is bidirectional
• Each offspring cell receives one copy of the DNA
molecule (semiconservative)
• Replication is highly accurate due to the
proofreading capability of DNA polymerase
• 1 error per 10 billion base pairs.
• E.coli has 4 million base pairs.
• DNAP operates at 2000 nucleotides per second.
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Replication fork
An E. coli chromosome in the process of replicating
REPLICATION
Origin of
replication
Parental
strand
Replication
fork
Daughter
strands
Replication
fork
Termination
of replication
Bidirectional replication of a circular bacterial DNA molecule
Replication
fork
Figure 8.6 Replication of bacterial DNA.
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RNA and Protein Synthesis
• Ribonucleic acid
• Single-stranded nucleotide
• 5-carbon ribose sugar
• Contains uracil (U) instead of thymine (T)
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RNA and Protein Synthesis
• Ribosomal RNA (rRNA): integral part of
ribosomes
• Transfer RNA (tRNA): transports amino acids
during protein synthesis
• Messenger RNA (mRNA): carries coded
information from DNA to ribosomes
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Transcription in Prokaryotes
• Synthesis of a complementary mRNA strand from
a DNA template
• Transcription begins when RNA polymerase binds
to the promoter sequence on DNA
• Transcription proceeds in the 5' 3' direction;
only one of the two DNA strands is transcribed
• Transcription stops when it reaches the
terminator sequence on DNA
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Figure 8.7 The process of transcription.
TRANSCRIPTION
DNA
mRNA
Protein
RNA
polymerase
DNA
RNA polymerase bound to DNA
RNA polymerase RNA nucleotides
Template strand of DNA
RNA
Promoter
(gene begins) RNA polymerase
RNA
RNA synthesis
Terminator
(gene ends)
RNA
polymerase
binds to the
promoter, and
DNA unwinds at
the beginning of
a gene.
RNA is synthesized
by complementary
base pairing of free
nucleotides with the
nucleotide bases on
the template strand
of DNA.
The site of synthesis
moves along DNA;
DNA that has been
transcribed rewinds. Transcription reaches
the terminator.
Complete
RNA strand
RNA and RNA
polymerase are
released, and the
DNA helix re-forms.
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Translation
• mRNA is translated into the "language" of proteins
• Codons are groups of three mRNA nucleotides
that code for a particular amino acid
• 61 sense codons encode the 20 amino acids
• The genetic code involves degeneracy, meaning
each amino acid is coded by several codons
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Figure 8.8 The genetic code.
Second position
First p
ositio
n
Th
ird
p
ositio
n
Phe
Leu
Ser
Tyr Cys
Leu Pro
His
Gln
Arg
Ile Thr
Asn
Lys
Ser
Arg
Val Ala
Asp
Glu
Gly
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Translation
• Translation of mRNA begins at the start codon:
AUG
• Translation ends at nonsense codons: UAA, UAG,
UGA
• Codons of mRNA are "read" sequentially
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Translation
• tRNA molecules transport the required amino
acids to the ribosome
• tRNA molecules also have an anticodon that
base-pairs with the codon
• Amino acids are joined by peptide bonds
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Figure 8.9 The process of translation (1 of 4).
Ribosome
P Site
Start
codon
Second
codon mRNA
On the assembled ribosome, a tRNA carrying the first
amino acid is paired with the start codon on the mRNA.
The place where this first tRNA sits is called the P site.
A tRNA carrying the second amino acid approaches.
Components needed to begin
translation come together.
mRNA
Anticodon
Ribosomal
subunit
Ribosomal
subunit tRNA
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Figure 8.9 The process of translation (2 of 4).
Peptide bond forms
A site
mRNA
E site
mRNA
Ribosome moves
along mRNA
The second codon of the mRNA pairs with a tRNA
carrying the second amino acid at the A site. The first
amino acid joins to the second by a peptide bond. This
attaches the polypeptide to the tRNA in the P site.
The ribosome moves along the mRNA until the second
tRNA is in the P site. The next codon to be translated is
brought into the A site. The first tRNA now occupies the E
site.
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Figure 8.9 The process of translation (3 of 4).
tRNA released
mRNA
The second amino acid joins to the third by another
peptide bond, and the first tRNA is released from the E
site.
The ribosome continues to move along the mRNA,
and new amino acids are added to the polypeptide.
mRNA
Growing
polypeptide
chain
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Figure 8.9 The process of translation (4 of 4).
mRNA
Polypeptide
released
Stop codon
When the ribosome reaches a stop
codon, the polypeptide is released.
Finally, the last tRNA is released, and the ribosome
comes apart. The released polypeptide forms a new
protein.
mRNA
New protein
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Translation
• In bacteria, translation can begin before
transcription is complete
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RNA polymerase
DNA
Met Met
Figure 8.10 Simultaneous transcription and translation in bacteria.
TRANSLATION
DNA
mRNA
Protein
DNA RNA
polymerase Direction of transcription
Peptide
Polyribosome
Ribosome
mRNA Direction of translation
5'
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Transcription in Eukaryotes
• In eukaryotes, transcription occurs in the nucleus,
whereas translation occurs in the cytoplasm
• Exons are regions of DNA that code for proteins
• Introns are regions of DNA that do not code for
proteins
• Small nuclear ribonucleoproteins (snRNPs)
remove introns and splice exons together
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Figure 8.11 RNA processing in eukaryotic cells.