pollen preparation procedure - csdco...2017/09/11  · tracking environmental change using lake...

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POLLEN PREPARATION PROCEDURE Introduction Pollen analysis is the principal technique available for determining vegetation response to past terrestrial environmental change. The technique has been in use for nearly a century, initially as a method for investigating past climatic changes. More recently, the importance for vegetation change of processes such as human impact, successional change, and other biotic and abiotic factors have been recognized. Pollen analysis can be used to examine these factors (Bennet and Willis, 2001). Pollen grains and spores are microscopic in diameter (most often between 10 and 70 µm). Due to the highly decay resistant compounds of the their walls, pollen grains and spores can be well preserved in lake sediments, peat deposits, soils, and rocks. The unique morphological characteristics of the pollen grains and spores make them easy to identify to species level. Through proper chemical treatment pollen grains and spores can be extracted from field samples, concentrated, and mounted for identification and quantification. Step 2: Potassium hydroxide (KOH) treatment This process removes humic acids (unsaturated organic soil colloids) by bringing them into solution, and also disaggregates the sediment. The quantity of humic acid may be considerable in organic material that is highly decomposed (such as some peats) (Figure 3 and 4). water, which does not mix with the silicone oil mounting medium. If the water is not 100% removed, irreversible clumping always occurs. Step 9: Mounting medium A good mounting medium should have a refractive index close to sporopollenin (1.48) for sufficient contrast to see features of the grains. Silicone oil and glycerol are preferred mounting mediums. V. Stefanova and J. Heck LacCore, Department of Earth Sciences, University of Minnesota A basic procedure for the preparation of sediment samples for the analysis of pollen is presented here following Bennet and Willis (2001). It is set out diagrammatically in Figure 1. More details and some additional techniques are covered in Faegri & Iversen (1989) and posted on the LacCore website. Images of sediment samples at different stages were taken to illustrate the processes in the pollen extraction procedure. Step 1: Addition of spike This is needed in order to obtain estimates of the concentration of pollen and spores in sediments. It must be the first stage, so that any losses of pollen and spores during the processing affect fossil and exotic pollen equally (Figure 2). Figure 2. Sediment samples at the first step in the pollen preparation procedure. A: pollen of Fagus (beech), Quercus (oak), spike. B: pollen of Tsuga (hemlock), spike. Step 3: Screening Coarse screening (160 μm) the sample removes particles larger than most pollen or spores. The residue retained on the sieve can be examined for smaller identifiable macrofossils (such as trees bud-scales, small seeds of Potamogeton or Betula, conifer needles) (Figure 5). The fine screening (6 μm) removes fine organic particles and clay, but it is optional because some fungal spores and pollen can be lost as well. Step 5: Hydrofluoric acid (HF) treatment This stage removes silica and silicates. Step 6: Hydrochloric (HCl) rinse HCl step removes colloidal silica and silicofluorides. Depending on the composition of the sediment, this step may be at least as important as the HF step. The reaction between HF and some minerals may produce an insoluble white precipitate, consisting of fluorides. Step 7: Acetolysis This stage removes polysaccharides by hydrolysing the polymer chain into soluble monosaccharide units. Polysaccharides are present on the surface of the grain and in the cytoplasm, so removing them greatly facilitates viewing the grain. Polysaccharides such as cellulose may also be significant components of the sediment, so removing these helps concentrate the pollen in the residue (Figure 8). Step 8: Dehydration A series of increasingly concentrated alcohols and tertiary butyl alcohol remove Step 4: Hydrochloric acid treatment This process removes carbonates. The reaction products are calcium chloride, which is soluble, and carbon dioxide, which is released as a gas (often vigorously). Magnesium containing carbonate (which may occur in areas with dolomitic limestones) reacts in the same way, but much slower. If its presence is suspected, longer periods in hot HCl are needed (Figures 6 and 7). Figure 8: Images of pollen after the acetolysis. A, B: Ulmus (elm). C: Fagus; D: Pinus. E: Tsuga. F: Carya (hickory). G: Tilia . H: Betula (birch). I: Aster-type. Quercus Fagus Spike Tsuga Figure 3. Sediment samples after the KOH treatment. A: Pollen of Artemisia (wormwood). 2 A. 2 B Figure 5. Residue retained on the 160 μm screen. A: Conifer bud-scale. B: Plant tissue. Figure 1. Steps involved in sediment processing for fossil pollen and spores 5B 5A Figure 9. Images of pollen in silicone oil, (Reference collection, LRC), chosen to illustrate some of the features used in identification. A: pollen of Picea mariana (black spruce), showing the bisaccate morphology characteristic of many conifers. B: Lilium michiganense (Michigan lily), showing monocolpate (one colpus) and supra-reticulate morphology; of C: pollen of Betula papyrifera (paper birch) with three pores (triporate) and psilate morphology; D: pollen of Panicum virgatum (switchgrass), showing the monoporate (single pore) morphology of grasses; E: pollen of Helianthus annulus represents the tricolporate (thee colpi and three pores) pollen types with echinate (spine) morphology (Aster-type); D: pollen of Acer rubrum (red maple) with tricolpate (3 colpi) and striate morphology. References: Faegri, K. & J. Iversen, 1989. Textbook of Pollen Analysis (4th ed.). Wiley, Chichester, 328 pp. Bennet, K.D. and Willis, K. J. 2001. Pollen. In: J. P. Smol, H. B. Birks & W. M. Last (eds.) Tracking Environmental Change Using Lake Sediments. Volume 3: T errestrial, Algal, and Siliceous Indicators.5-32 p. Kluwer Academic Publishers, Dordrecht, The Netherlands. Figure 7. Sediment samples after the HCl treatment. A: pollen of Pinus; B: pollen of Quercus Figure 6. Sediment sample after the HCl treatment. A: pollen of Tsuga. B: Pollen of Alnus incana-type (Speckled alder) 7A. 7B. 6A 6B 3A. Figure 4. Sediment samples after the KOH treatment. A: Pollen of Tilia (basswood). B: Pinus bladder. C: Quercus. 4A 4B 4C

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Page 1: POLLEN PREPARATION PROCEDURE - CSDCO...2017/09/11  · Tracking Environmental Change Using Lake Sediments. Volume 3: T errestrial, Algal, and Siliceous Indicators. 5-32 p. Kluwer Academic

POLLEN PREPARATION PROCEDURE

IntroductionPollen analysis is the principal techniqueavailable for determining vegetationresponse to past terrestrial environmentalchange. The technique has been in use fornearly a century, initially as a method forinvestigating past climatic changes. Morerecently, the importance for vegetationchange of processes such as human impact,successional change, and other biotic andabiotic factors have been recognized. Pollenanalysis can be used to examine thesefactors (Bennet and Willis, 2001).Pollen grains and spores are microscopic indiameter (most often between 10 and70 µm). Due to the highly decay resistantcompounds of the their walls, pollen grainsand spores can be well preserved in lakesediments, peat deposits, soils, and rocks.The unique morphological characteristics ofthe pollen grains and spores make themeasy to identify to species level. Throughproper chemical treatment pollen grains andspores can be extracted from field samples,concentrated, and mounted for identificationand quantification.

Step 2: Potassium hydroxide(KOH) treatmentThis process removes humic acids(unsaturated organic soil colloids) bybringing them into solution, and alsodisaggregates the sediment. Thequantity of humic acid may beconsiderable in organic material thatis highly decomposed (such as somepeats) (Figure 3 and 4).

water, which does not mix with the silicone oilmounting medium. If the water is not 100%removed, irreversible clumping always occurs.

Step 9: Mounting mediumA good mounting medium should have arefractive index close to sporopollenin (1.48) forsufficient contrast to see features of the grains.Silicone oil and glycerol are preferred mountingmediums.

V. Stefanova and J. HeckLacCore, Department of Earth Sciences, University of Minnesota

A basic procedure for the preparation ofsediment samples for the analysis ofpollen is presented here followingBennet and Willis (2001). It is set outdiagrammatically in Figure 1. More detailsand some additional techniques arecovered in Faegri & Iversen (1989) andposted on the LacCore website.Images of sediment samples at differentstages were taken to illustrate theprocesses in the pollen extractionprocedure.

Step 1: Addition of spikeThis is needed in order to obtainestimates of the concentration of pollenand spores in sediments. It must be thefirst stage, so that any losses of pollenand spores during the processing affectfossil and exotic pollen equally (Figure 2).

Figure 2. Sediment samples at the firststep in the pollen preparation procedure. A: pollen of Fagus (beech), Quercus (oak), spike. B: pollen of Tsuga(hemlock), spike.

Step 3: ScreeningCoarse screening (160 µm) the sampleremoves particles larger than mostpollen or spores. The residue retainedon the sieve can be examined forsmaller identifiable macrofossils (suchas trees bud-scales, small seeds ofPotamogeton or Betula, conifer needles)(Figure 5). The fine screening (6 µm)removes fine organic particles and clay,but it is optional because some fungalspores and pollen can be lost as well.

Step 5: Hydrofluoric acid (HF) treatmentThis stage removes silica and silicates.

Step 6: Hydrochloric (HCl) rinseHCl step removes colloidal silica andsilicofluorides. Depending on thecomposition of the sediment, this step maybe at least as important as the HF step.The reaction between HF and someminerals may produce an insoluble whiteprecipitate, consisting of fluorides.

Step 7: AcetolysisThis stage removes polysaccharides byhydrolysing the polymer chain into solublemonosaccharide units. Polysaccharidesare present on the surface of the grain andin the cytoplasm, so removing them greatlyfacilitates viewing the grain.Polysaccharides such as cellulose mayalso be significant components of thesediment, so removing these helpsconcentrate the pollen in the residue(Figure 8).

Step 8: DehydrationA series of increasingly concentrated alcohols and tertiary butyl alcohol remove

Step 4: Hydrochloric acid treatmentThis process removes carbonates. Thereaction products are calcium chloride,which is soluble, and carbon dioxide,which is released as a gas (oftenvigorously). Magnesium containingcarbonate (which may occur in areas withdolomitic limestones) reacts in the sameway, but much slower. If its presence issuspected, longer periods in hot HCl areneeded (Figures 6 and 7).

Figure 8: Images of pollen after theacetolysis. A, B: Ulmus (elm). C: Fagus;D: Pinus. E: Tsuga. F: Carya (hickory). G:Tilia . H: Betula (birch). I: Aster-type.

Quercus

Fagus

Spike

Tsuga

Figure 3. Sediment samples after theKOH treatment. A: Pollen of Artemisia(wormwood).

2 A.

2 B

Figure 5. Residue retained on the 160 µmscreen. A: Conifer bud-scale. B: Planttissue.

Figure 1. Steps involved in sedimentprocessing for fossil pollen and spores

5B5A

Figure 9. Images of pollen in silicone oil,(Reference collection, LRC), chosen toillustrate some of the features used inidentification. A: pollen of Picea mariana(black spruce), showing the bisaccatemorphology characteristic of many conifers.B: Lilium michiganense (Michigan lily),showing monocolpate (one colpus) andsupra-reticulate morphology; of C: pollen ofBetula papyrifera (paper birch) with threepores (triporate) and psilate morphology; D:pollen of Panicum virgatum (switchgrass),showing the monoporate (single pore)morphology of grasses; E: pollen ofHelianthus annulus represents thetricolporate (thee colpi and three pores)pollen types with echinate (spine)morphology (Aster-type); D: pollen of Acerrubrum (red maple) with tricolpate (3 colpi)and striate morphology.References:Faegri, K. & J. Iversen, 1989. Textbook of Pollen Analysis

(4th ed.). Wiley, Chichester, 328 pp.Bennet, K.D. and Willis, K. J. 2001. Pollen. In: J. P. Smol, H.B. Birks & W. M. Last (eds.) Tracking Environmental

Change Using Lake Sediments. Volume 3: Terrestrial, Algal, and Siliceous Indicators.5-32 p.Kluwer Academic Publishers, Dordrecht, TheNetherlands.

Figure 7. Sediment samples after the HCl treatment. A: pollen of Pinus; B:pollen of Quercus

Figure 6. Sediment sample after the HCl treatment. A: pollen of Tsuga. B:Pollen of Alnus incana-type (Speckledalder)

7A.

7B.

6A

6B

3A.

Figure 4. Sediment samples after theKOH treatment. A: Pollen of Tilia(basswood). B: Pinus bladder. C: Quercus.

4A4B

4C