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Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno [email protected]

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Page 1: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Overview of WinEquus

Stephen JenkinsEmeritus Professor of Biology

University of Nevada, [email protected]

Page 2: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Two Purposes of Modeling(Caswell 1976)

• Models for understanding

• Models for prediction ≈ forecasting

• Doomsday: 2026.87 = 13 November 2026(von Foerster et al. 1960, Science 132:1291)

Caswell, H. 1976. The validation problem. Pages 313-325 in B. C. Patten, editor. Systems analysis and simulation in ecology. Academic Press, New York, New York, USA.

Page 3: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Data Requirements for WinEquus

• initial age-sex distribution• annual survival probabilities for each age-sex class• annual foaling rates for each age class of mares• sex ratio at birth

• ideally, these data should– be site-specific– have variance estimates

Page 4: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Data Available in Practice

• estimate of population size at a site• sometimes, estimate of age-sex distribution

– if horses released in recent gather were aged

• sex ratio near birth?

• estimates of survival and reproduction at a few sites– 11 years of data for Pryor Mountain, MT (Garrott & Taylor 1990)

– 6 years for the Granite Range, NV (Berger 1986)

– 7 years for Garfield Flat, NV (Ashley 2000)

Page 5: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Is lack of site-specific data a problem?

Page 6: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Is lack of site-specific data a problem?

Page 7: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Is lack of site-specific data a problem?

• recent data → average annual adult survival > 90% for

– Cumberland Island, GA (Goodloe et al., 2000, J. Wildl. Manage. 64:114-121)

– Montgomery Pass, NV-CA(Turner & Morrison, 2001, Southwestern Naturalist 46:183-190)

– Kaimanowa Ranges, New Zealand(Linklater et al., 2004, Wildl. Res. 31:119-128)

– Przewalski’s wild horses in France (not free-ranging)(Tatin et al., 2008, J. Zool. 277:134-140)

– recently feral horses in the Camargue in France(Grange et al., 2009, Proc. Royal Soc. B 276:1911-1919)

– Tornquist Park, Argentina(Scorolli & Lopez Cazorla, 2010, Wildl. Res. 37:207-214)

Page 8: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Is lack of site-specific data a problem?

• There is more variation between sites in

– annual survival probability of foals

– foaling rate, especially of young mares

Location Foaling Rate of 2-year-olds

Pryor Mountain, 1976-1986 0

Pryor Mountain, 1996-2000 0.08

Granite Range, 1979-1983 0.35

Garfield Flat, 1993-1999 0.52

Page 9: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Three kinds of stochasticity in WinEquus

• Measurement uncertainty in initial population size

• Demographic stochasticity

• Environmental stochasticity

Page 10: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Measurement uncertainty in initial population size: User adjustments

– 90% sighting probability is default(Garrott et al. 1991. J. Wildl. Manage. 55:641-648)

– WinEquus uses abeta-binomial model

– User may specifyexact initial conditionsinstead

Page 11: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Demographic Stochasticity in WinEquus:User adjustments

None …

… foaling rate = 0.5→ 50% chance of foaling for each mare

→ 10 mares may have 5 foals,or 4 or 6, or 3 or 7, or 2 or 8, …

Page 12: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Environmental Stochasticity in WinEquus:User adjustments

• Eleven years of data for Pryor Mountain, MT(Garrott and Taylor. 1990. J. Wildl. Manage. 54:603-612)

→ Logistic distributions used to simulate stochasticity

Page 13: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu
Page 14: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu
Page 15: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Garfield Flat, NV:

selective removal in winter 1997 → non-equilibrium age distribution

N0 = 109

Page 16: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Density-Dependence in WinEquus

Page 17: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Density-Dependence in WinEquus

Why no density-dependence as default?

(1)Populations often managed below levels where DD effects likely.

(2)Insufficient data to estimate carrying capacity or form of DD effects.

Page 18: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Some thoughts on density-dependence

1) Experimental evidence

2) Analysis of short time series

3) Predation may regulate feral horse populations in some places

4) Without predators, carrying capacity for some herbivores may mean high mortality or habitat degradation

Page 19: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Experimental evidence of density-dependence:feral donkeys in Australia (Choquenot, 1991, Ecology 72:805-813)

Culled Population Control Population

Density reduction 80% --

Density after 4 yrs. 1.8/km2 3.2/km2

Growth rate (r) 0.18 0

Foaling rate 87% 77%

Foal mortality rate 21% 62%

Page 20: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Short time series & density dependence(Grange et al., 2009, Proc. Royal Soc. B. 276:1911-1919, Scorolli & Lopez Cazorla, 2010,

Wildl. Res. 37:207-214)

Page 21: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Predation & density dependence (Turner & Morrison, 2001, SW Naturalist 46:183-190)

Mountain lions may regulate horse populations e.g., at Montgomery Pass, mountain lions killed 45% of foals/yr

Page 22: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

this 22 mi2 reserve is productive (high ppt, fertile soil)

a rewilding experiment (without mammalian predators)1983-1992: 32 Heck cattle, 20 konik ponies, 44 red deerintroduced2010: 3000 ungulates; 15-24% of horses starve in winter

What happens at carrying capacity?

Oostvaardersplassen, the Netherlands

(F. W. M. Vera, June 2009, British Wildlife)

Page 23: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

Two Purposes of Modeling(Caswell 1976)

• Models for understanding

• Models for prediction ≈ forecasting

Caswell, H. 1976. The validation problem. Pages 313-325 in B. C. Patten, editor. Systems analysis and simulation in ecology. Academic Press, New York, New York, USA.

Page 24: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

A WinEquus Example

• How would fertility control affect population growth at Garfield Flat?

• Initial conditions and assumptions– N0 ≈ 109, like after selective removal of young horses in Feb

1997– average survival probabilities, foaling rates, sex ratio @

birth as found by Ashley & Jenkins for 1993-1999– year-to-year variation in survival and foaling follow logistic

distributions

Page 25: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu
Page 26: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu
Page 27: Overview of WinEquus Stephen Jenkins Emeritus Professor of Biology University of Nevada, Reno jenkins@unr.edu jenkins@unr.edu

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Cumulative Percentage of Trials

0

5

10

15

0 20 40 60 80 100

Ave

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%)

Cumulative Percentage of Trials

0

5

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0 20 40 60 80 100

Growth rates with fertility treatment

Minimum 3.8%

Median 9.7%

Maximum 12.4%

Growth rates without fertility treatment

Minimum 14%

Median 18.3%

Maximum 22.3%