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University of Illinois at Chicago UIC CHEM 232 Organic Chemistry I Lecture 15 Organic Chemistry 1 Professor Duncan Wardrop March 2, 2010 1

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Page 1: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

University of Illinois at ChicagoUICCHEM 232

Organic Chemistry I

Lecture 15Organic Chemistry 1

Professor Duncan Wardrop

March 2, 2010

1

Page 2: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

University of Illinois at ChicagoUICCHEM 232

Organic Chemistry I

Section 7.1 - 7.8

Stereochemistry

2

Page 3: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Historical Importance of Stereochemisty

3

Once a molecule is asymmetric, its extension proceeds also in an asymmetrical sense. This concept completely eliminates the difference between natural and artificial synthesis. The advance of science has removed the last chemical hiding place for the once so highly esteemed vis vitalis.

Emil Fischer, 1894

3

Page 4: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: February 2

A

B

C

D

Which pair of molecules below are not stereoisomers?

Self Test Question

4

H

O

H

O

CH3Br BrCH3

O

H

O

H

F

ClBrH

F

Cl BrH

geometrical stereoisomers

conformationalstereoisomers

enantiomericstereoisomers

identicalmolecules

Stereoisomers:1. same connectivity2. different arrangement

of atoms in space

4

Page 5: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: February 2

A

B

C

D

Which structure cannot be moved in space (translation) or undergo rotation around single bonds to obtain a mirror image of the molecule (1) below?

Self Test Question

5

CH3

ClHO

CH3

ClOH

mirror image

CH3ClHO

Cl

H3CHO

CH3

OHCl

OH

CH3Cl

1 2

CH3

ClOH 90 º

180 º60º

CH3

ClOH

60ºCH3

ClOH

identical to 1

5

Page 6: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality

6

CH3

ClHO

CH3

ClOH

mirror image1 2

A molecule is chiral if its two mirror image forms are not superimposable on one another

Superimposable molecules can be laid on top of one another so that all equivalent atoms (points) line up

180 º

2

CH3

HOCl

6

Page 7: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chiral Objects

7

chiral: non-superimposable mirror images

snail

mirrorimage

7

Page 8: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chiral Objects

8

milkyway mirror image

chiral: non-superimposible mirror images

8

Page 9: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality

9

chiral: non-superimposible mirror images

fingerprint mirror image

9

Page 10: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality

10

chiral: non-superimposible mirror images

DNA double helix mirror image

10

Page 11: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality

11

chiral: non-superimposable mirror imagescheir (Greek) = hand

chirality is synonymous with “handedness”

11

Page 12: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Molecules can Also Be Chiral

12

chiral: non-superimposible mirror images

HBrCl

FH BrCl

F

12

Page 13: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Superimposibility

13

HBrCl

FH BrCl

F

180º

to check for superimposibility, rotate mirror image 180º along a plane perpendicular to the mirror plane

13

Page 14: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Non-superimposible

14

chiral: non-superimposible mirror images

HBrCl

FHClBr

F

if the images are not identical, they are non superimposible; not all points (atoms) line up

14

Page 15: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Not Everything is Chiral!

15

achiral: not chiral; mirror images are superimposible

basketball mirror image

15

Page 16: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Not Everything is Chiral!

16

achiral: not chiral; mirror images are superimposible

16

Page 17: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Not Everything is Chiral!

17

achiral: not chiral; mirror images are superimposible

17

Page 18: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Symmetry Tests for Achiral Molecules

18

Any molecule with a plane of symmetry or a center of symmetry is achiral (not chiral)

A plane of symmetry bisects a molecule into two mirror image halves

18

Page 19: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Symmetry Tests for Achiral Molecules

19

Any molecule with a plane of symmetry or a center of symmetry is achiral (not chiral)

A plane of symmetry bisects a molecule into two mirror image halves

H3C CH3plane of symmetry

19

Page 20: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Symmetry Tests for Achiral Molecules

20

Any molecule with a plane of symmetry or a center of symmetry is achiral (not chiral)

A plane of symmetry bisects a molecule into two mirror image halves

Cl

Br plane of symmetry•

20

Page 21: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Symmetry Tests for Achiral Molecules

21

Any molecule with a plane of symmetry or a center of symmetry is achiral (not chiral)

A plane of symmetry bisects a molecule into two mirror image halves

plane of symmetry

C C ClBrH H

21

Page 22: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Symmetry Tests for Achiral Molecules

22

Any molecule with a plane of symmetry or a center of symmetry is achiral (not chiral)

center of symmetry: a line drawn from center of molecule to an element extends in opposite direction to an identical element

22

Page 23: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Symmetry Tests for Achiral Molecules

23

Any molecule with a plane of symmetry or a center of symmetry is achiral (not chiral)

center of symmetry: a line drawn from center of molecule to an element extends in opposite direction to an identical element

23

Page 24: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: February 2

A

B

C

D

Which molecule below is chiral?

Self Test Question

24

CH3H3C

Cl

Cl

H3C CH3

Br Cl

HO H

Cl

CH2

CH3

24

Page 25: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality Center

25

Chirality center: an atom bonded to ligands in a spatial arrangement which is not superimposable on its mirror image

CW

ZY X

other terminologycommonly used:

• stereocenter• stereogenic center

avoid these terms; both have different meanings from chirality center

Asymmetric carbon: a carbon atom bonded to four different atoms or groups (a type of chirality center)

25

Page 26: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality Center

26

A molecule with a single chirality center is chiral

CBr

ClF H bromochlorofluoromethane is chiral

26

Page 27: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality Center

27

A molecule with a single chirality center is chiral

• 2-butanol is chiral• although two carbon atoms are

bonded to the chirality center, they are part of different groups

OHCH

H3C CH2CH3

27

Page 28: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality Center

28

A molecule with a single chirality center is chiral

H2C CO H

CH3 • 1,2-epoxypropane: a chirality center can be part of a ring

• attached to the chirality center are:-H-CH3

-CH2O-OCH2

28

Page 29: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Chirality Center

29

A molecule with a single chirality center is chiral

CH

TD CH3

chiral as a result of isotopic substitution

29

Page 30: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

1 Chirality Center = Chiral

30

A molecule with a single chirality center must be chiral.But a molecule with two or more chirality centers may be

chiral or it may not be chiral (Sections 7.10-7.13)

CBr

ClF H

OHCH

H3C CH2CH3H2C CO H

CH3

CH3

ClOH C

H

TD CH3

30

Page 31: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: February 2

A. 7

B. 6

C. 5

D. 4

E. 3

How many chirality centers in a molecule of codeine?

Self Test Question

31

OH3CO

NCH3

HOH

31

Page 32: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

University of Illinois at ChicagoUICCHEM 232

Organic Chemistry I

Section: 7.6

Cahn–Ingold–Prelog (CIP)Priority Rules

R-S Notation forChirality Centers

32

Page 33: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

CIP R/S Notation

33

Step One: Locate chirality center

chirality center CH3

C

ClHO H

33

Page 34: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

CIP R/S Notation

34

Step Two: Orient molecule so that lowest ranked (CIP priority) atom or group points away from you

CH3

C

ClHO H

CH3

CClHO

Hchirality center

34

Page 35: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

CIP R/S Notation

35

Step Three: Number 3 highest priority groups in order of increasing priority (CIP sequence rules)

CH3

C

ClHO H

CH3

CClHO

Hchirality center

12

3

35

Page 36: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

CIP R/S Notation

36

Step Four: Determine rotation direction of groups in decreasing priority

CH3

C

ClHO H

CH3

CClHO

Hchirality center

12

3

clockwise (rectus) = Rcounterclockwise (sinister) = S(R)-1-chloroethanol

36

Page 37: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: February 2

A

B

C

D

Which molecule has a chirality center with an absolute con!guration of R?

Self Test Question

37

F HBr

Cl

HO H

OHH

CH3

OHO

H CH3

1

2 3clockwise = R

37

Page 38: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Enantiomers

38

molecules which are non-superimposible mirror images are called enantiomers;

enantiomer describes a relationship between two molecules (enantiomer: opposite handedness)

(S)-2-butanol (R)-2-butanol

enantiomers have opposite configurations (R/S) at every chirality center

OH OHenantiomers OH180 º

38

Page 39: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Enantiomers

39

molecules which are non-superimposible mirror images are called enantiomers;

enantiomer describes a relationship between two molecules (enantiomer: opposite handedness)

CH3

ClHO

CH3

ClOH

enantiomers CH3

ClHO

180 º

(S)-2-chloro-2-butanol (R)-2-chloro-2-butanol

enantiomers have opposite configurations (R/S) at every chirality center

39

Page 40: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Isomers

40

stereoisomers

Can the molecules be interconverted by rotation

around single bonds?

noyes

conformational configurational

isomers

Do the molecules have the same connectivity?

no yesconstitutional(structural)

40

Page 41: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Stereoisomers

41

configurational stereoisomers

Is the isomerism at a doulbe bond?

yes

geometrical optical

no

enantiomers diastereomers

Are the compounds non-superimposible mirror

images?

yesno

41

Page 42: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: February 2

A

B

C

D

Which pair of molecules are enantiomers?

Self Test Question

42

H HCl Br

HHClBr

HO H H OH

HO H

OH

H H

CH3OH

OHCH3

Remember: if a molecule has a plane or center of symmetry, it is not chiral

and therefore has no enantiomers.

42

Page 43: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: February 2

A

B

C

D

E

Which molecule is (R)-1-hexen-3-ol?

Self Test Question

43

OH

OH

HO H

OHH

HHO

1

23

clockwise = R

43

Page 44: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

University of Illinois at ChicagoUICCHEM 232

Organic Chemistry I

Chapter 7: Sections 7.9 - 7.17

Next Lecture. . .

44

Page 45: Organic Chemistry I University of Illinois at Chicago UICramsey1.chem.uic.edu/chem232/page7/files/Chem 232 Lecture 15.pdfCIP R/S Notation 35 Step Three: Number 3 highest priority groups

UICUniversity of Illinois at Chicago CHEM 232, Spring 2010 Slide

Lecture 15: March 2

Projected Grades

45

A   >77B   66-76C   39-65D   24-38F   <23

0

5

10

15

20

25

30

35

40

45

50

0 1-11 11-21 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100

Chem 232 Exan One

Precent Distribution

45