open annotation in the charme project for the i annotate conference
DESCRIPTION
TRANSCRIPT
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Open Annotation in The CHARMe Project
Raquel Alegre
I Annotate 2014
3rd and 4th April 2014 – San Francisco
Scientific S/W Engineer
University of Reading, UK
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Summary
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• Introduction to CHARMe
Summary
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• Introduction to CHARMe
• What’s a climate dataset?
Summary
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• Introduction to CHARMe
• What’s a climate dataset? • Use of Open Annotation in CHARMe
Summary
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• Introduction to CHARMe
• What’s a climate dataset? • Use of Open Annotation in CHARMe
• CHARMe’s basic use case
Summary
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• Introduction to CHARMe
• What’s a climate dataset? • Use of Open Annotation in CHARMe
• CHARMe’s basic use case
• CHARMe’s advanced tools
Summary
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Introduction to CHARMe
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Introduction to CHARMe
Post-fact annotations
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Introduction to CHARMe
Post-fact annotations
External events
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Introduction to CHARMe
Post-fact annotations
External events
Data Provenance
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Introduction to CHARMe
Post-fact annotations
External events
Data Provenance
User feedback
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Introduction to CHARMe
Post-fact annotations
External events
Data Provenance
User feedback
Data policy
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Introduction to CHARMe
Post-fact annotations
External events
Data Provenance
User feedback
Data policy
Results of assessments
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Introduction to CHARMe
Post-fact annotations
External events
Data Provenance
User feedback
Data policy
Results of assessments
CHARMe
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Post-fact annotations
External events
Data Provenance
User feedback
Data policy
Results of assessments
CHARMe
Introduction to CHARMe
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Post-fact annotations
External events
Data Provenance
User feedback
Data policy
Results of assessments
Sharing knowledge about Climate Data to help users judge fitness-for-purpose
CHARMe
Introduction to CHARMe
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CHARMe
Annotation
Metadata
Climate
Dataset
Overlapping volcanic eruption
I recently published a paper about this
dataset
CHARMe basic OA use case
Does anyone know about other related
datasets? http://www.someURL.com/dataset
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CHARMe
Annotation
Metadata
Climate
Dataset
Overlapping volcanic eruption
I recently published a paper about this
dataset
CHARMe basic OA use case
Does anyone know about other related
datasets? http://www.someURL.com/dataset
W3C OA is a natural fit for CHARMe…
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CHARMe
Annotation
Metadata
Climate
Dataset
Overlapping volcanic eruption
I recently published a paper about this
dataset
CHARMe basic OA use case
Does anyone know about other related
datasets? http://www.someURL.com/dataset
W3C OA is a natural fit for CHARMe… …plus it lets us record motivation, tag, have multiple targets.
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CHARMe node
CHARMe node
CHARMe node
3rd party system
Data provider website
• CHARMe will create connected repositories of commentary information
• Annotations stored as triples in “CHARMe nodes”
• Information can be read and entered through websites or web services
CHARMe basic OA use case
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CHARMe basic OA use case
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CHARMe basic OA use case
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CHARMe basic OA use case
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CHARMe basic OA use case
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What's a Climate Dataset?
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Measurement < 1999 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014
HPLC
PABS
CDOM
SPM
POC - CHN
Chla(fluoro)
Primary production
FRRF
Ed, Lu
ac9
bb6
VSF,bb3
Above water RSR
PAR
Transmissometer
Flow cytometry
Coulter Counter
Phytoplankton counts
CTD
What's a Climate Dataset?
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Measurement < 1999 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014
HPLC
PABS
CDOM
SPM
POC - CHN
Chla(fluoro)
Primary production
FRRF
Ed, Lu
ac9
bb6
VSF,bb3
Above water RSR
PAR
Transmissometer
Flow cytometry
Coulter Counter
Phytoplankton counts
CTD
What's a Climate Dataset?
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Measurement < 1999 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014
HPLC
PABS
CDOM
SPM
POC - CHN
Chla(fluoro)
Primary production
FRRF
Ed, Lu
ac9
bb6
VSF,bb3
Above water RSR
PAR
Transmissometer
Flow cytometry
Coulter Counter
Phytoplankton counts
CTD
What's a Climate Dataset?
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Measurement < 1999 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014
HPLC
PABS
CDOM
SPM
POC - CHN
Chla(fluoro)
Primary production
FRRF
Ed, Lu
ac9
bb6
VSF,bb3
Above water RSR
PAR
Transmissometer
Flow cytometry
Coulter Counter
Phytoplankton counts
CTD
What's a Climate Dataset?
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Measurement < 1999 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014
HPLC
PABS
CDOM
SPM
POC - CHN
Chla(fluoro)
Primary production
FRRF
Ed, Lu
ac9
bb6
VSF,bb3
Above water RSR
PAR
Transmissometer
Flow cytometry
Coulter Counter
Phytoplankton counts
CTD
What's a Climate Dataset?
http://svs.gsfc.nasa.gov/vis/a000000/a003800/a003821/flow_flat_sst_2048x1024.mp4
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Some advanced use cases...
Climate data users discuss about data:
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Some advanced use cases...
Climate data users discuss about data: - Intercompare datasets
- Research on events timing
- Focus on specific areas of the world
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Some advanced use cases...
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Plankton bloom: “when did it start?”
Some advanced use cases...
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Plankton bloom: “when did it start?”
Sediment from rivers: “Where did it come from?”
Some advanced use cases...
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Plankton bloom: “when did it start?”
Sediment from rivers: “Where did it come from?”
Reflective bloom: “or is it an image artefact??”
Some advanced use cases...
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Plankton bloom: “when did it start?”
Sediment from rivers: “Where did it come from?”
Reflective bloom: “or is it an image artefact??”
Plankton tracing currents: “how deep?”
Some advanced use cases...
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Plankton bloom: “when did it start?”
Sediment from rivers: “Where did it come from?”
Reflective bloom: “or is it an image artefact??”
Plankton tracing currents: “how deep?”
Clear blue ocean: “isn’t it nice?”
Some advanced use cases...
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CHARMe advanced use cases
Climate data often comes in 2D, 3D and 4D formats
How to refer to a specific subset of these?
OA SVG Selectors are not enough
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CHARMe advanced tools
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CHARMe advanced tools
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CHARMe advanced tools
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CHARMe advanced tools
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Climate Dataset
Dataset’s
subset
CHARMe
Annotation
Metadata
Let’s update our report.
Could be sediment.
Why these high values?
Subset
Selector
Geographic
Selector
Temporal
Selector
hasTemporalSelector
hasGeographicSelector
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CHARMe is all about Climate Data, but its use cases are also applicable to many other fields. Even Art!
Conclusions
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CHARMe is all about Climate Data, but its use cases are also applicable to many other fields. Even Art! Previous efforts e.g.: MapHub.
Conclusions
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CHARMe is all about Climate Data, but its use cases are also applicable to many other fields. Even Art! Previous efforts e.g.: MapHub. A few questions:
Conclusions
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CHARMe is all about Climate Data, but its use cases are also applicable to many other fields. Even Art! Previous efforts e.g.: MapHub. A few questions: How to annotate 4D data?
Conclusions
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CHARMe is all about Climate Data, but its use cases are also applicable to many other fields. Even Art! Previous efforts e.g.: MapHub. A few questions: How to annotate 4D data? Is it possible to standardize this?
Conclusions
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CHARMe is all about Climate Data, but its use cases are also applicable to many other fields. Even Art! Previous efforts e.g.: MapHub. A few questions: How to annotate 4D data? Is it possible to standardize this? What RDF ontologies to use?
Conclusions
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CHARMe is all about Climate Data, but its use cases are also applicable to many other fields. Even Art! Previous efforts e.g.: MapHub. A few questions: How to annotate 4D data? Is it possible to standardize this? What RDF ontologies to use? Let’s discuss later!
Conclusions
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