neural network of c. elegans is a small-world network masroor hossain wednesday, february 29 th,...

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Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th , 2012 Introduction to Complex Systems

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Page 1: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

Neural Network of C. elegans is a Small-World Network

Masroor HossainWednesday, February 29th, 2012Introduction to Complex Systems

Page 2: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

Background on C. elegans

• It’s a transparent nematode (roundworm).• The hermaphrodite version has a simple

nervous system comprising about 302 neurons.

• It’s neural network is completely mapped.• The pattern of connectivity portrays small-

world network characteristics.

Page 3: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems
Page 4: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

Recall

• The characteristic path length L is defined as the number of edges in the shortest path between two vertices, averaged over all pairs of vertices.

• The clustering coefficient C measures the degree to which nodes in a graph tend to cluster together - how close neighbors are to being a clique.

Page 5: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

Procedure for Measuring C – from class

Page 6: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

Random Rewiring Procedure• p = 0 represents regularity (no edge)• p = 1 represents disorder (clique)• n = 20 and k = 4

Page 7: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

Random Rewiring Procedure

• For C. elegans, an edge/link joins two neurons if they are connected by a synapse or gap junction.

• There are n = 282 nodes and k = 14 edges.

Page 8: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

NetLogo Models

Page 9: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems
Page 10: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems
Page 11: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

Cumulative Distribution of Outgoing and Incoming Neural Connections

Page 12: Neural Network of C. elegans is a Small-World Network Masroor Hossain Wednesday, February 29 th, 2012 Introduction to Complex Systems

Questions?