mujair fix
DESCRIPTION
tabmTRANSCRIPT
5610 5620 5630 5640 5650 5660 5670 5680 5690 5700
....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
mujair GCCCGGCTCTCTTCTCGGAGACGACCAAATCTATAATGTAATTGTTACAGCACATGCTTTCGTAATAATTTTCTTTATAGTAATACCAATTATGATTGGA
oreochromis sp GCCCGGCTCTCTTCTCGGAGACGACCAAATCTATAATGTAATTGTTACAGCACATGCTTTCGTAATAATTTTCTTTATAGTAATACCAATTATGATTGGA
0reochromis musambicus GCCCGGCTCTCTCCTGGGAGACGACCAGATTTATAATGTAATTGTTACAGCACATGCTTTCGTAATAATTTTCTTTATAGTAATGCCAATTATAATTGGA
oreochromis nicolaticus GCCCGGCTCTCTCCTCGGAGACGACCAGATTTATAATGTAATTGTTACAGCACATGCTTTCGTAATAATTTTCTTTATAGTAATACCAATTATAATTGGA
Hypoplectrus sp ACCCGGAGCTCTTTTAGGAGACGACCAGATTTATAATGTAATTGTTACAGCACACGCCTTCGTAATAATTTTCTTCATAGTCATGCCAATTATGATTGGA
Anisarchus medius -CCCGGCGCCCTTTTAGGAGACGACCAAATTTATAACGTAATTGTTACAGCGCATGCGTTTGTAATAATTTTCTTTATAGTAATACCAATCATGATCGGG
Lumpenus sagitta -CCCGGCGCCCTCTTAGGAGACGACCAAATTTATAACGTAATTGTTACAGCGCATGCGTTCGTAATAATTTTCTTTATAGTAATACCAATCATGATCGGG
Lycodes concolor -CCCGGCGCCCTTCTGGGTGACGACCAAATTTACAATGTCCTTGTTACAGCGCATGCGTTCGTAATAATTTTCTTTATAGTAATACCAATTATGATTGGG
Lycodes raridens -CCCGGCGCCCTCCTGGGGGACGACCAAATTTACAATGTCCTTGTTACAGCGCATGCGTTCGTAATAATTTTCTTTATAGTAATACCAATTATGATTGGG
Clustal Consensus *****. * ** * ** ********.** ** ** **..**********.** ** ** ************** *****.**.***** **.** **.
5710 5720 5730 5740 5750 5760 5770 5780 5790 5800
....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
mujair GGCTTTGGAAACTGACTAGTACCCCTCATGATTGGTGCACCAGACATGGCCTTCCCTCGAATAAATAACATGAGCTTTTGACTTCTCCCCCCCTCATTTC
oreochromis sp GGCTTTGGAAACTGACTAGTACCCCTCATGATTGGTGCACCAGACATGGCCTTCCCTCGAATAAATAACATGAGCTTTTGACTTCTCCCCCCCTCATTTC
0reochromis musambicus GGTTTTGGAAACTGACTAGTGCCACTAATGATTGGTGCACCAGACATGGCCTTCCCTCGAATAAATAACATGAGTTTTTGACTCCTCCCCCCCTCATTTC
oreochromis nicolaticus GGTTTTGGAAACTGACTAGTACCACTTATGATTGGTGCACCAGACATGGCCTTCCCTCGAATGAACAACATGAGTTTTTGACTCCTTCCCCCCTCATTTC
Hypoplectrus sp GGCTTCGGCAACTGACTCATTCCTTTAATGATTGGTGCGCCCGACATGGCATTTCCTCGTATAAACAATATGAGCTTTTGACTTCTTCCTCCTTCCTTCC
Anisarchus medius GGGTTTGGAAACTGGCTTATCCCCTTAATAATTGGGGCCCCAGACATAGCATTTCCCCGAATAAATAACATGAGTTTTTGACTACTCCCTCCCTCCTTCC
Lumpenus sagitta GGGTTTGGAAACTGGCTAATTCCCCTAATGATTGGGGCCCCAGACATAGCATTTCCCCGAATAAATAACATGAGTTTTTGACTCCTCCCTCCCTCTTTTC
Lycodes concolor GGTTTTGGAAACTGGCTCGTACCCTTAATAATTGGGGCCCCGGACATAGCATTCCCCCGAATAAACAACATGAGCTTTTGACTCCTTCCCCCGTCTTTTC
Lycodes raridens GGTTTTGGAAACTGGCTCGTACCCTTAATAATTGGGGCCCCGGACATGGCATTCCCCCGAATAAACAATATGAGCTTTTGACTCCTTCCCCCATCTTTTC
Clustal Consensus ** ** **.*****.** .* ** * **.***** ** ** *****.**.** ** **:**.** ** ***** ******** ** ** ** ** ** *
5810 5820 5830 5840 5850 5860 5870 5880 5890 5900
....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
mujair TTCTTCTTCTCGCCTCATCTGGAGTCGAAGCAGGTGCCGGCACAGGATGGACTGTTTATCCCCCGCTCGCAGGCAATCTTGCCCACGCTGGACCTTCTGT
oreochromis sp TTCTTCTTCTCGCCTCATCTGGAGTCGAAGCAGGTGCCGGCACAGGATGGACTGTTTATCCCCCGCTCGCAGGCAATCTTGCCCACGCTGGACCTTCTGT
0reochromis musambicus TCCTTCTCCTCGCCTCATCCGGGGTCGAAGCAGGGGCCGGTACAGGATGGACTGTTTATCCCCCACTCGCAGGCAATCTCGCCCATGCGGGGCCTTCCGT
oreochromis nicolaticus TCCTCCTCCTCGCCTCATCCGGAGTCGAAGCAGGGGCCGGTACAGGATGAACTGTTTACCCCCCACTCGCAGGCAATCTCGCCCACGCTGGGCCTTCTGT
Hypoplectrus sp TTCTCCTTCTGGCCTCATCAGGGGTAGAAGCAGGAGCTGGGACGGGTTGAACTGTTTATCCTCCACTAGCCGGAAACTTAGCACATGCTGGGGCTTCAGT
Anisarchus medius TTCTTCTCCTTGCCTCTTCTGGGGTAGAAGCGGGAGCCGGGACAGGATGAACAGTTTACCCACCCCTTTCTGGCAATTTAGCCCACGCAGGGGCCTCTGT
Lumpenus sagitta TCCTTCTCCTTGCCTCCTCTGGGGTAGAGGCGGGGGCTGGAACAGGATGAACAGTTTATCCTCCCCTTTCCGGTAATTTAGCCCACGCAGGGGCCTCTGT
Lycodes concolor TTCTCCTCCTTGCCTCTTCAGGAGTAGAAGCAGGCGCTGGGACAGGGTGAACAGTTTACCCCCCTCTCTCTGGCAACTTAGCCCATGCAGGGGCCTCCGT
Lycodes raridens TTCTCCTCCTTGCCTCTTCGGGGGTGGAGGCGGGTGCTGGGACAGGATGAACAGTTTACCCCCCTCTCTCTGGTAACTTAGCCCATGCAGGAGCCTCCGT
Clustal Consensus * ** ** ** ***** ** **.** **.**.** ** ** **.** **.**:***** ** ** ** * ** ** * **.** ** **. * ** **
5910 5920 5930 5940 5950 5960 5970 5980 5990 6000
....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
mujair TGACTTAACCATCTTCTCCCTCCACTTGGCCGGAGTGTCATCTATTTTAGGTGCAATTAATTTTATCACAACCATTATTAACATGAAACCCCCTGCCATC
oreochromis sp TGACTTAACCATCTTCTCCCTCCACTTGGCCGGAGTGTCATCTATTTTAGGTGCAATTAATTTTATCACAACCATTATTAACATGAAACCCCCTGCCATC
0reochromis musambicus TGACTTAACCATCTTCTCCCTCCACTTGGCCGGGGTGTCATCTATTTTAGGTGCAATTAATTTTATTACAACCATTATTAACATAAAACCCCCTGCCATC
oreochromis nicolaticus TGACTTAACCATCTTTTCCCTCCACTTGGCCGGGGTGTCATCCATTTTAGGTGCAATTAATTTTATCACAACCATTATTAACATAAAACCCCCTGCCATC
Hypoplectrus sp TGACTTAACAATTTTCTCACTTCATCTAGCAGGTGTATCCTCTATCCTTGGGGCAATCAACTTCATTACTACAATCATTAATATGAAACCTCCTGCTATC
Anisarchus medius TGACTTAACAATTTTTTCTCTCCACTTGGCGGGAATTTCTTCAATTCTTGGAGCAATTAATTTTATTACAACCATTATTAACATAAAACCCCCGGCCATT
Lumpenus sagitta TGATTTAACAATTTTCTCTCTTCACTTAGCGGGGATTTCTTCAATCCTCGGGGCAATCAATTTCATTACGACCATTATTAACATGAAACCCCCAGCCATT
Lycodes concolor TGATTTAACAATCTTCTCCCTTCACCTAGCAGGGATTTCTTCAATCCTCGGGGCAATTAATTTCATTACGACCATCATTAACATGAAGCCCCCTGCGATC
Lycodes raridens TGATTTGACAATCTTCTCCCTTCACCTAGCAGGGATTTCTTCAATCCTCGGGGCAATTAATTTTATTACGACCATCATTAACATGAAGCCCCCCGCGATC
Clustal Consensus *** **.**.** ** ** ** ** *.** ** .* ** ** ** * ** ***** ** ** ** ** **.** ***** **.**.** ** ** **
6010 6020 6030 6040 6050 6060 6070 6080 6090 6100
....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
mujair TCCCAATATCAAACACCCCTATTTGTGTGATCCGTCCTAATTACCGCAGTACTACTCCTTCTATCCCTGCCCGTTCTTGCCGCCGGCATCACAATACTTC
oreochromis sp TCCCAATATCAAACACCCCTATTTGTGTGATCCGTCCTAATTACCGCAGTACTACTCCTTCTATCCCTGCCCGTTCTTGCCGCCGGCATCACAATACTTC
0reochromis musambicus TCCCAATATCAAACACCCCTCTTTGTATGATCCGTTCTAATTACCGCAGTACTACTCCTACTATCCCTACCCGTTCTTGCCGCCGGCATCACAATACTTC
oreochromis nicolaticus TCTCAATATCAAACACCCCTATTTGTGTGATCCGTTCTAATTACCGCAGTGCTGCTCCTACTATCCCTGCCCGTTCTTGCCGCCGGCATCACAATACTTC
Hypoplectrus sp TCCCAATATCAAACTCCTCTCTTTGTTTGAGCCGTCCTAATTACAGCGGTTCTACTTCTTCTTTCTCTTCCAGTCCTTGCTGCTGGAATTACTATGCTAC
Anisarchus medius TCTCAGTACCAAACACCCCTTTTCGTTTGATCAGTGCTTATTACCGCCGTTCTCCTACTCCTCTCTCTACCCGTACTCGCAGCTGGCATTACAATGCTCT
Lumpenus sagitta TCTCAGTACCAGACACCCCTTTTCGTCTGATCAGTACTTATTACGGCCGTTCTCCTTCTCCTATCTCTCCCCGTGCTCGCAGCTGGGATTACCATGCTAT
Lycodes concolor TCTCAGTACCAAACACCCCTCTTCGTCTGGTCCGTGCTCATTACGGCAGTCCTACTTCTCCTCTCTCTCCCCGTCCTTGCAGCTGGAATTACCATGCTCC
Lycodes raridens TCTCAGTACCAGACACCCCTCTTCGTCTGGTCCGTGCTCATTACGGCGGTCCTACTTCTCCTCTCTCTCCCCGTCCTTGCAGCTGGAATTACCATGCTCC
Clustal Consensus ** **.** **.**:** ** ** ** **. *.** ** ***** ** ** ** ** ** ** ** ** **.** ** ** ** ** ** ** **.**
6110 6120 6130 6140 6150 6160 6170 6180 6190 6200
....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|....|
mujair TAACAGACCGAAACCTAAACACAACCTTCTTTGACCCTGCCGGAGGAGGAGACCCCATCCTATACCAACACTTATTCTGATTCTTCGGTCACCCTGAAGT
oreochromis sp TAACAGACCGAAACCTAAACACAACCTTCTTTGACCCTGCCGGAGGAGGAGACCCCATCCTATACCAACACTTATTCTGATTCTTTGGCCACCCTGAAGT
0reochromis musambicus TAACAGACCGTAAACCAAACACAACTCTTTTTGACCCGGCCGGACGATGAGACGCCATCCTATACCTACACTTA--------------------------
oreochromis nicolaticus TAACAGATCGCAACCTAAACACAACCTTCTTTGACCCTGCCGGAGGAGGAGACCCCATCCTTTACCAACACTTATTCTGATTTTTTGGTCACCGG-----
Hypoplectrus sp TTACAGACCGAAACCTGAATACTACTTTCTTTGACCCTGCTGGGGGAGGAGATCCCATTCTTTACCAACATCTATTCTGATTCTTCGGCCACCCAGAA--
Anisarchus medius TGACAGACCGAAATCTTAATACTACCTTCTTCGACCCCGCCGGAGGGGGTGACCCCATCCTCTACCAACACTTGTTCTGATTCTTTGGCCACCCTGAAGT
Lumpenus sagitta TAACAGATCGTAATCTTAACACCACCTTCTTTGACCCCGCCGGAGGAGGTGACCCAATCCTCTATCAACACTTGTTTTGATTCTTTGGCCATCCTGAAGT
Lycodes concolor TGACAGATCGTAACCTTAATACCACCTTCTTCGACCCCGCCGGAGGAGGGGACCCAATCCTTTACCAACACCTGTTCTGATTCTTTGGCCACCCTGAGGT
Lycodes raridens TGACAGATCGTAACCTTAATACCACCTTCTTCGACCCCGCCGGAGGAGGAGACCCCATCCTTTATCAACACCTATTCTGATTCTTTGGCCACCCTGAGGT
Clustal Consensus * ***** ** ** * ** ** ** * ** ***** ** **. *. * ** *.** ** ** *:*** *.
5610 - 5700= 75 basa5710 5800= 71 basa
5810 5900= 66 basa
5910 6000= 66 basa
6010 6100= 66 basa
6110 - 6200 =45 basa
No basa
5615 T-C = transversi5618 T-C = transversi5619 T-C = transversi5621 C- G, C-A, C-G = transisi5624 A-T, A-G = 5633 A-G
5636 C-T
5639 T-C
5642 T-C
5645 A-C
5646 A-C
5657 A-G
5660 T-C
5663 T-C, T-G
5656 C-T
5681 T-C
5687 A-C
5690 A-G
5696 T-C
5699 G-A
5702 T-C
5705 A-G