module 1: evolution monthdaytopic sept8mechanisms of evolution i 11mechanisms of evolution ii...
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Module 1: Evolution
Month Day TopicSept 8 Mechanisms of evolution I
11 Mechanisms of evolution II
13 Speciation
15 Macroevolution and phylogenies
18 Biodiversity
20 The history of plants
22 Molecular evolution
25
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Exam review
First mid-term exam
What controls the rate at which new species form?
• Species richness
• Range size and mobility
• Behavior, especially mate choice
What controls the rate at which new species form?
• Species richness
• Range size and mobility
• Behavior, especially mate choice
• Environmental change
What controls the rate at which new species form?
• Species richness
• Range size and mobility
• Behavior
• Environmental change
• Life history
What controls the rate at which new species form?
• Species richness
• Range size and mobility
• Behavior
• Environmental change
• Life history
• “Empty space”
4th mass extinction 210 mya: ~65% of species5th mass extinction 65 mya: ~76% of speciesExtraterrestrial impact or volcanism?
What controls the rate at which new species form?
• Species richness
• Range size
• Behavior
• Environmental change
• Generation time
• “Empty space”
• Innovation
MicroevolutionChange in the frequencies of genotypes
in a population
The formation of new species
Macroevolution
Taxonomy
• Linnaeus (1700s)– System of classification based on
morphological similarity
– Binomial nomenclature
Taxonomy
• Linnaeus (1700s)– System of classification based on
morphological similarity
– Binomial nomenclature
– Hierarchical classification
Hierarchical classification
Kingdom: Animalia
Phylum: Chordata
Class: Mammalia
Order: Primates
Family: Hominidae
Genus: Homo
Species: H. sapiens
Hierarchical classification
Kingdom: Animalia
Phylum: Arthropoda
Class: Insecta
Order: Diptera
Family: Muscidae
Genus: Musca
Species: M. domestica
Hierarchical classification
Kingdom: Plantae
Phylum: Anthophyta
Class: Monocotyledonae
Order: Poales
Family: Poaceae
Genus: Zea
Species: Z. mays
Hierarchical classification
Kingdom: Plantae
Phylum: Anthophyta
Class: Monocotyledonae
Order: Asparagales
Family: Orchidaceae
Genus: Vanilla
Species: V. planifolia
Phylogenetics
Classification of organisms according to their evolutionary relationships
A phylogeny is the history of decent of a group of organisms from their common
ancestor
Ancestor
Sp. 1 Sp. 2 Sp. 3
Prehensile control
Tail stub appears
Tail motor control
DERIVED CHARACTER
Jaws Limbs Hair Lungs Tail Shell
0 0 0 0 0 0
1 1 0 1 0 1
1 1 1 1 0 0
1 1 1 1 1 0
1 0 0 1 0 0
1 0 0 0 0 0
1 1 1 1 1 0
Lamprey
Turtle
Cat
Gorilla
Lungfish
Trout
Human
Taxon Traits (Characters)
Homologs
Features that have descended from a common ancestral feature
Use homology to determine phylogenetic relationships
More difficulties…
• Convergent evolution– Similar environments shape features that
have different ancestral origins to look very much alike
More difficulties…
• Parallel evolution– Similar developmental processes may
make traits in distantly related organisms look similar, even though those traits did not come from a shared ancestor
More difficulties…
• Convergent evolution
• Parallel evolution
• Evolutionary reversals
Traits that are similar due to these processes are called
homoplastic traits
Homologous trait
versus
Homoplastic trait
Same because of descent from common ancestor
Same because shaped by similar environments
Homologous trait
versus
Homoplastic trait
Used to build phylogenetic relationships
Not used to build phylogenetic relationships
Principle of parsimony
Choose the simplest hypothesis capable of explaining the pattern.
Descent from a common ancestor is much simpler than invoking
homoplasies.
Principle of parsimony
…think of it as the path of least resistance
It is “easier” to inherit a trait than to build a new one.
Principle of parsimony
The null hypothesis: this trait was inherited from a common ancestor
The alternative hypothesis: this trait was built by natural selection
Modern taxonomy
• Taxonomic groups should reflect evolutionary relationships
• Taxonomic groups should be monophyletic– They should contain all the descendents of
a particular ancestor, and no others
Evolutionary Tree
extreme
thermophiles
halophilesmethanogens cyanobacteria
ARCHAEBACTERIA
PROTISTANS
FUNGIPLANTS
ANIMALS
clubfungi
sacfungi
zygospore-forming
fungi
echino-derms
chordatesannelids
mollusks
flatworms
sponges
cnidarians
flowering plants conifers
horsetails
lycophytes
ferns
bryophytes
sporozoans
green algae amoeboidprotozoans
slime molds
ciliatesredalgae
brown algaechrysophytes
cycads
ginkgos
rotifers
arthropodsround-worms
chytrids
oomycotes
euglenoids
dinoflagellates
Gram-positive bacteria
spirochetes
chlamydias
proteobacteria
? crown of eukaryotes
(rapid divergences)
molecular origin of life
EUBACTERIAparabasalids
diplomonads(e.g., Giardia)
(alveolates)
(stramenopiles)
chlorophytes
kinetoplastids
extreme
(e.g., Trichomonas)
Figure 19.21Page 321