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Microtubule-based transport – basic mechanisms,traffic rules and role in neurological pathogenesis
Mariella A. M. Franker1 and Casper C. Hoogenraad1,2,*1Cell Biology, Faculty of Science, Utrecht University, 3584 CH Utrecht, The Netherlands2Department of Neuroscience, Erasmus Medical Center, 3000 DR Rotterdam, The Netherlands
*Author for correspondence ([email protected])
Journal of Cell Science 126, 2319–2329� 2013. Published by The Company of Biologists Ltddoi: 10.1242/jcs.115030
SummaryMicrotubule-based transport is essential for neuronal function because of the large distances that must be traveled by various buildingblocks and cellular materials. Recent studies in various model systems have unraveled several regulatory mechanisms and traffic rulesthat control the specificity, directionality and delivery of neuronal cargos. Local microtubule cues, opposing motor activity and cargo-adaptors that regulate motor activity control microtubule-based transport in neurons. Impairment of intracellular transport is detrimental
to neurons and has emerged as a common factor in several neurological disorders. Genetic approaches have revealed strong linksbetween intracellular transport processes and the pathogenesis of neurological diseases in both the central and peripheral nervoussystem. This Commentary highlights recent advances in these areas and discusses the transport defects that are associated with the
development of neurological diseases.
Key words: Brain, Neuron, Neurological disease, Microtubule, Transport, Kinesin, Dynein, Adaptor proteins
IntroductionTo build and maintain highly complex neurons with active
synapses, many basic building blocks – for example, proteins,
lipids and cellular materials, such as mitochondria and synaptic
vesicles – need to be sorted to either axons or dendrites (Kapitein
and Hoogenraad, 2011; Namba et al., 2011; Rolls, 2011). It is
well known that intracellular cargo transport in neurons is driven
by motor proteins that can move directionally along either of two
types of cytoskeletal structures: actin filaments and microtubules
(see Box 1). Actin facilitates motility of motor proteins of the
myosin family, whereas microtubules serve as tracks for two
families of motor proteins, the kinesins and dyneins, which move
towards the microtubule plus-end or minus-end, respectively
(Hirokawa et al., 2009; Schliwa and Woehlke, 2003; Vale, 2003).
Evidence shows that microtubule-based transport mainly
facilitates the long-range transport into distal axons and
dendrites, whereas actin-based transport is important for short-
range transport and delivery of proteins to synapses and growth
cones (Dent et al., 2011; Hoogenraad and Bradke, 2009;
Kneussel and Wagner, 2013).
Although many members of the motor families participate in
neuronal cargo trafficking, the diversity of motor proteins alone is
insufficient to account for the specificity, directionality and timing
of delivery. It has been shown that regulation of transport occurs
through several additional processes, such as activation or
deactivation of motors, selective binding of motors to cargo,
through microtubule-associated proteins (MAPs) and microtubule
post-translational modifications (PTMs) (Akhmanova and
Hammer, 2010; Goldstein et al., 2008; Janke and Bulinski, 2011;
Schlager and Hoogenraad, 2009). How the microtubule-based
transport of specific cargo types is spatially and temporally
regulated in neurons is now an emerging field of investigation.
Neurons are especially vulnerable to defects in transport due to
the extreme length of the neuronal processes. The longest axon in
the human body can be up to 1 meter long, whereas an average
neuronal cell body is ,50 mm. Motor proteins and their regulatorshave crucial roles in the development of many neurological and
neurodegenerative diseases (De Vos et al., 2008; Millecamps and
Julien, 2013). Disruption of intracellular transport can result in
vesicle-trafficking impairments, alter specific cargo interactions
and cause defects in retrograde survival signals, ultimately leading
to neuronal death and loss of brain function (Coleman, 2011;
Perlson et al., 2010; Saxena and Caroni, 2007). Axonal
pathologies, including abnormal accumulations of proteins and
organelles have been observed in patients with Huntington’s,
Parkinson’s and Alzheimer’s disease, and can severely hinder
neuronal transport pathways (Gunawardena and Goldstein,
2005; Millecamps and Julien, 2013). However, whether the
accumulations are the cause or the consequence of transport
defects is unclear, and the causal relationship between
transport impairments and neurodegeneration is unknown. The
identification of mutations in genes involved in neuronal transport
pathways strongly supports the view that defective transport can
directly trigger neurological diseases. Several disruptive mutations
in a- or b-tubulin and microtubule-based motors have been directlylinked to neurological diseases in both the central and peripheral
nervous system (Eschbach and Dupuis, 2011; Millecamps and
Julien, 2013; Tischfield et al., 2011). In this Commentary, we will
discuss the disease-causing mutations in motor and regulatory
proteins that lead to developmental and neurological disorders.
Before doing so, we outline the basic molecular mechanisms that
control neuronal transport and focus on microtubule cues,
bidirectional transport mechanisms and motor adaptors as
regulators of motor activity.
ARTICLE SERIES: Cell Biology and Disease Commentary 2319
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Transport mechanisms in neuronsMicrotubule-based transport is crucial for neuronal survival and
function, both during development and in the adult brain.
Different cellular processes, such as neuronal migration, axon
guidance, the establishment and maintenance of neuronal polarity
and synaptic plasticity, involve many cytoskeletal elements and
transport events that together form the complex cellular networks
of the nervous system and ensure that the proper connections are
made in the brain (Barnes and Polleux, 2009; Conde and Cáceres,
2009; Hoogenraad and Bradke, 2009). In this section, we will
briefly highlight the importance of the cytoskeletal network and
motor protein transport for neuronal development and function
(Fig. 1).
During development of the nervous system, neuron progenitor
cells migrate across the brain to their final destination (Hatten,
1999). Although extracellular factors and adhesion molecules
provide directional cues to direct the migrating cells and guide
axonal growth, cytoskeletal interactions produce the forces that
are necessary for nuclear positioning and neuronal migration
(Gundersen and Worman, 2013; Kuijpers and Hoogenraad, 2011;
Stiess and Bradke, 2011). For example, it has been shown that
actin-based myosin motors and the dynein regulator Lis1 (also
known as PAFAH1B1) are important for pulling the centrosome
and soma forwards during migration (Vallee et al., 2009). Most
neurons polarize during the migration process to form a distinctaxonal and somatodendritic compartment. It is well known that
microtubule-based mechanisms have an active role in determiningneuronal polarity and axonal outgrowth (Hoogenraad andBradke, 2009). For example, stable microtubules can act asspecific transport roads for the trafficking of signaling factors
that participate in neuronal polarization (Arimura and Kaibuchi,2007; Witte and Bradke, 2008). After the polarization anddifferentiation stages, neurons need to maintain their extensively
polarized morphology, and specific components must bedelivered to the correct neuronal compartment. Specifictargeting of different motor–cargo complexes to either the axon
or the dendrites ensures that the cargo is transported correctly(Hirokawa et al., 2009; Kapitein and Hoogenraad, 2011). Recentstudies have found that, although a few kinesins are non-selective, most kinesin motors preferentially target cargos to the
axon (Huang and Banker, 2012) and only dynein transports cargoexclusively into dendrites (Kapitein et al., 2010a). Thecytoskeleton organization in the axon initial segment (AIS) is
also thought to have a role in axonal targeting by preventingvesicles with dendritic cargo from entering the axon (Song et al.,2009; Watanabe et al., 2012). Moreover, mature neurons form
dendritic spines, which are small ‘knob’-shaped extensionsprotruding from the surface of the dendrites. Dendritic spinesare the major post-synaptic sites for excitatory synaptic
transmission (Bourne and Harris, 2008; Kennedy et al., 2005).Several studies have shown that dynamic microtubulesoccasionally enter denditic spines and have a role in spinemorphology and synaptic plasticity (Hoogenraad and
Akhmanova, 2010). Microtubules in spines might influenceactin dynamics and promote the transport of postsynaptic cargos,such as receptors and postsynaptic proteins. Moreover, transport
processes in the axon of neurons in the central and peripheralnervous system are of key importance to distribute the variousbuilding blocks and cellular materials (Hirokawa et al., 2010;
Millecamps and Julien, 2013; Perlson et al., 2010; Saxton andHollenbeck, 2012). Thus, many different microtubule-basedprocesses are actively involved in various phases of neuronaldevelopment and in the mature nervous system.
Microtubule cues steer neuronal transport
Neuronal transport can be directly regulated by the underlying
microtubule cytoskeleton. The local organization ofmicrotubules, MAPs, such as axonal tau, and PTMs all affectfor neuronal transport (Janke and Kneussel, 2010; Verhey and
Hammond, 2009). In axons, anterograde and retrograde transportis directly dictated by the unipolar organization of themicrotubule array (Hirokawa et al., 2009; Hoogenraad andBradke, 2009). However, in dendrites, the microtubules coalesce
into bundles of mixed polarity and a single motor type couldmediate bidirectional cargo transport by switching frommicrotubules in which the minus-end is directed outwards
(minus-end out) to microtubules in which the plus-end isdirected outwards (plus-end out). The anti-parallel microtubuleorganization in dendrites provides a structural framework for the
regulation of cargo trafficking and raises interesting models withregard to neuronal trafficking rules (Kapitein and Hoogenraad,2011; Rolls, 2011). Moreover, the influence of the local
organization of actin cytoskeleton at presynaptic terminals anddendritic spines and its affect on neuronal cargo transport is ofsignificant importance (Hotulainen and Hoogenraad, 2010;
Box 1. Biochemical and biophysical properties ofmotor proteins
The movements of organelles were first observed in the squid
giant axon and, soon after, molecular motors were identified as the
effectors of this transport (Allen et al., 1982; Brady et al., 1982;
Vale et al., 1985). The decades following the discovery of motor
proteins have yielded many important insights into the molecular,
structural and biophysical properties of cytoskeleton-dependent
motor transport. Many motor properties, such as directionality, stall
forces, and step sizes are now well understood based on
controlled in vitro experiments (Block, 2007; Reck-Peterson et al.,
2006; Yildiz et al., 2008). The structure of kinesin was first
demonstrated using electron microscopy (Hirokawa et al., 2009),
and further high-resolution crystallographic structures of the motor
domains have led to detailed insights into how force and
movement are coupled (Carter et al., 2011; Kon et al., 2012;
Kull et al., 1996). Revolutionary single-molecule biophysics
experiments established that kinesin walks with an asymmetric
hand-over-hand stepping mechanism, hydrolyzing a single ATP
molecule per motor step (Asbury et al., 2003; Vale et al., 1996;
Yildiz et al., 2004). For the motor to be processive, there must be a
proper coordination between the two motor heads. It is still a
matter of debate how this coordination, or gating, takes place
(Block, 2007). Motor proteins move unidirectionally with either
plus-end motility (kinesins) or minus-end motility (dyneins).
However, occasional backstepping of motor proteins can occur
and was first observed for dynein (Toba et al., 2006). It has been
postulated that increased flexibility of the dynein structure gives
rise to a diffusional component in the dynein step, causing an
‘irregular’ stepping pattern that allows variable step sizes, back
steps and even sideways steps (DeWitt et al., 2012; Qiu et al.,
2012). Other studies show that kinesins are also capable of ATP-
dependent backstepping when they are biased by load (Carter and
Cross, 2005). In these situations, the neck-linker region plays an
important role in mediating strain between the two motor heads
and in regulating gating (Clancy et al., 2011).
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Kneussel and Wagner, 2013). For example, myosin motors have
been shown to counteract microtubule-based transport and
facilitate the docking of mitochondria to actin filaments
(Saxton and Hollenbeck, 2012). In vitro approaches have
shown that the axonal MAP tau can be used to tune the
relative amounts of plus-end- and minus-end-directed kinesin
transport (Dixit et al., 2008; Vershinin et al., 2007). Low
concentrations of tau facilitate kinesin-mediated transport,
whereas high concentrations of tau, as is found in the distal
parts of the axon, are favorable for dynein-mediated transport.
Such a difference between the effects of tau on kinesin- and
dynein-based motility has not been confirmed in vivo, where
neither overexpression of tau nor tau deletion alters axonal
transport (Morfini et al., 2007; Yuan et al., 2008). Interestingly,
phosphorylated tau is involved in a number of neurological
disorders, such as Alzheimer’s disease, and has recently been
shown to mislocalize to dendritic spines and mediate synaptic
dysfunction (Hoover et al., 2010).
A leading model for driving selective neuronal transport is that
the affinity of motor proteins for microtubules is affected by the
PTMs on the microtubules (Janke and Kneussel, 2010; Verhey
and Hammond, 2009). For example, during neuronal
polarization, it is well known that vectorial membrane
trafficking occurs into the future axon (Bradke and Dotti,
1997), that stable microtubules act as specific transport roads
(Arimura and Kaibuchi, 2007; Witte and Bradke, 2008), and that
kinesin-1 motors accumulate specifically at the tips of axons
(Jacobson et al., 2006; Nakata and Hirokawa, 2003), all
suggesting that kinesin-1 prefers stable microtubules for axonal
cargo transport. Recent work has identified a specific region in
kinesin-1 that is responsible for its preference to bind to
detyrosinated microtubules (Konishi and Setou, 2009). Here,
knockdown of tubulin–tyrosin ligase (TTL) to decrease
tyrosinated microtubules resulted in the redistribution of
kinesin-1 in both axons and dendrites. Other data suggest that
the abundance of GTP-tubulin in microtubules at the AIS
underlies the selective kinesin-1 localization in axons (Nakata
et al., 2011). Therefore, selective transport is probably not
regulated by a single factor but probably by various local cues,
such as a combination of specific microtubule modifications,
associated proteins and tubulin conformations.
Opposing motor activity and bidirectional transport
Many and diverse types of proteins and cellular materials have
been shown to move bidirectionally in cells (Welte, 2004). A
large number of organelles and cytoskeleton proteins, including
Neuronal migration Neuronal polarization Synapse plasticity
Centrosome
Nucleus
+ ++
+
+
+
+ +
––– –
Actin and myosin II produce
contractile force
AIS filtersunwanted cargo
Mixed microtubulesdirect dendritic
transport
+++
––––
+
PSD
Microtubules
–
+
+++
–––
–+
PSD
Microtubules
Radial glial cell
Neuron protrusion
Postmitoticneuron
Postsynapticspine with
actin network
Microtubulesgrow inside
spinesAxon
Dendrites
Actin maintainsspine shapeand scaffold for the PSD
Actinnetwork
Dynein
Dynein and Lis1 produce
pulling force
Translocationof nucleus
Direction ofmigration
Key
A B C
PTMs guideaxonal transport
Microtubule entryinfluences
synaptic activity
Fig. 1. The role of the cytoskeleton during neuronal development and maturation. (A) During maturation, neurons migrate to their final destination in the
brain, establish a highly polarized structure and form chemical synapses that make the connections between the pre- and post-synaptic sites. The cytoskeleton
plays crucial roles throughout these processes. During migration, actin-based myosin II motors and microtubule-based dynein motors generate the pulling and
pushing forces that translocate the nucleus (see also, Vallee et al., 2009). (B) To maintain the highly polarized neuronal structure, different cargos must be
selectively transported to either the somatodendritic or axonal compartment. The panel shows a few important mechanisms that guide neuronal polarity (see also,
Kapitein and Hoogenraad, 2011). Microtubule post-translational modification (PTMs) that are present in the axon (blue) but absent in dendrites (red) specifically
target axonal cargo, whereas microtubule bundles with mixed orientation direct transport in the dendrites. In addition, the axon initial segment (AIS) filters out
dendritic cargo and prevents it from entering the axon. (C) The actin network is the primary component that gives shape to the dendritic spines and forms a
scaffold for the post-synaptic density (PSD). In addition, microtubules have been shown to transiently enter spines (see Hoogenraad and Akhmanova, 2010).
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endosomes (Deinhardt et al., 2006), autophagosomes (Madayet al., 2012), intermediate filaments (Li et al., 2012) and synaptic
vesicles (Sabo and McAllister, 2003), are known to showbidirectional movement in neuronal axons. Although there aresome differences between the movements of various neuronalcargos, they share common features, such as frequent stopping
and pausing, as well as reversals in direction during transport,and we are beginning to understand the importance of thesemechanisms to achieve appropriate cargo distributions in
neurons. An interesting example from Drosophila shows thatneuropeptide-containing dense core vesicles, which aretransported into the distal axons, initially pass the proximal
boutons, the presynaptic axonal bulges. Excess vesicles circulateback to the soma and are occasionally captured in en passantboutons, ensuring uniform distribution throughout the axon(Wong et al., 2012).
Although bidirectional movement has been observed in almostall cellular systems, it remains a matter of debate how theseprocesses are regulated. In vitro, motor proteins are intrinsically
capable of processively transporting cargo without requiringadditional regulation by other factors. As indicate above, a singletype of motor protein can mediate bidirectional movement on a
mixed network of opposite polarity microtubule bundles, such asthat found in the dendrites (Kapitein et al., 2010a). Anotherinteresting aspect of bidirectional transport is the interplay betweendifferent microtubule motor types. Backwards and forwards
movements are typically observed during neuronal transport;however, net movement in one direction occurs over largedistances in neurons. How is this achieved? One possibility is
that motors with opposite directionality are continuously acting ona cargo and engage in a stochastic ‘tug-of-war’. This can result ineither stalling of the cargo or in bidirectional, salutatory movements
depending on the relative ‘strength’ of the attached motors.Ultimately, one type of motor wins and transports the cargo in itspreferred direction. A recent study using synthetic ‘DNA origami’
found that ensembles of artificial cargo that are composed ofopposite polarity motors are engaged in a tug-of-war, resulting installed cargo (Derr et al., 2012). Modeling has shown that stochastictug-of-war can induce salutatory bidirectional movements (Müller
et al., 2008), and deformations of endosomes during transport invivo in cohort with decreased speeds during transitions betweenanterograde and retrograde transport (Soppina et al., 2009) argue in
favor of this model. In addition, purified neuronal vesicles thatmove along microtubules in vitro show very similar behavior asobserved in vivo, suggesting that all components that are necessary
for transport are strongly attached to the vesicles themselves(Hendricks et al., 2010). It is plausible, however, that motor-adaptor proteins or other signaling proteins that are attached to the
vesicles were co-purified in this study and further regulated theactivity of the motors (Gross, 2003; Welte, 2004).
Thus, although there is evidence that supports a stochastic‘tug-of-war’ hypothesis, the activity of opposing motors appears
to be closely interlinked (Fig. 2). Knockdown of either kinesin ordynein results in impaired transport in both plus- and minus-enddirections in several different cell types (Jolly and Gelfand,
2011), and it has been shown that coupling an active plus-end-directed motor to peroxisomes also induces motility in theopposite direction in Drosophila S2 cells (Ally et al., 2009)
suggesting that motors with opposite directionality directlyactivate each other. Similar results were found in a study onbidirectional movement of mitochondria in Drosophila larval
motor axons (Pilling et al., 2006). In contrast, several otherstudies report that cargo transport in one direction is readily
achieved by selectively targeting a single type of motor protein,and they demonstrate that the activation by a motor with an
opposite directionality is not required. For instance, a robust
unidirectional motility was observed when kinesin motors arerecruited to peroxisomes, even when dynein function was
disrupted (Kapitein et al., 2010b). Furthermore, acute inhibitionof either dynein heavy chain (DHC) or kinesin-1 heavy chain
(KHC, also known as KIF5B) with antibodies has been found
to only impair minus-end- and plus-end-directed motion,respectively (Hendricks et al., 2010; Shubeita et al., 2008).
These apparently contradictory findings could reflect the variouscontrol mechanisms that exist for motor-based protein transport
(Jolly and Gelfand, 2011). As will be discussed below in more
detail, coordination of opposing motors in neurons is a complexprocess that is regulated by several molecular machineries at
various cellular levels.
Motor adaptors as regulators of motor activity
It is becoming increasingly clear that interactions between motorsand their adaptors are a crucial step in selective transport (Fig. 2)
(Akhmanova and Hammer, 2010; Goldstein et al., 2008;
Hirokawa et al., 2010; Schlager and Hoogenraad, 2009). Arecent report studying the axonal transport of vesicles containing
the prion protein (PrPC) showed that the composition of dyneinand kinesin motors is the same in anterograde-directed,
retrograde-directed and stationary vesicles (Encalada et al.,2011). These data suggest that – in addition to local motor
recruitment mechanisms – a stable population of cargo-
associated motors can be modulated by regulatory factors tocontrol anterograde and retrograde transport. Indeed,
microtubule-based transport is extensively controlled byinternal and external factors, and many regulators of dynein
and kinesin motors have been identified. Recent research has
Dynein KinesinAdaptor protein
Cargo
– +
MAPsPTMs
Kinases and phosphatasesRab GTPaseCa2+
Microtubule
Fig. 2. Bidirectional transport. Plus-end-directed kinesin motors and
minus-end-directed dynein motors are attached to the same cargo
simultaneously and can engage in a stochastic ‘tug-of-war’. In addition, these
motors are regulated further to ensure a proper distribution of cargo in living
cells (black arrows). Adaptor proteins mediate the specific binding between
motor proteins and their cargo. Crosstalk between adaptors and other
regulators is also possible, biasing movement in the direction of either
kinesin- (blue arrow) or dynein-mediated movement (green arrow). Several
signaling events, such as local changes in Ca2+ levels, phosphorylation-
dependent signaling and regulated Rab GTPase activity can activate or
deactivate motors or act on adaptor proteins and other regulators. Finally,
motor activity can be regulated by the underlying microtubule cytoskeleton,
including microtubule-associated proteins (MAPs) and microtubule post-
translational modifications (PTMs).
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shown that adaptor proteins that link motors to their cargo canfunction as either activators or inhibitors of motor proteins and
allow for changes in the direction of transport (Akhmanova andHammer, 2010; Schlager and Hoogenraad, 2009). The list ofmolecules that are known to link transport motors to specificneuronal cargos is rapidly expanding. Biochemical and
proteomics approaches, as well as high-throughput yeast two-hybrid screens, have identified more than 100 proteins that areassociated with kinesin-1 in mammals, flies and worms
(Gindhart, 2006). Most of these proteins are cargo moleculesthemselves, but some are adaptor proteins, including scaffoldingproteins and Rab GTPases that regulate neuronal transport. For
example, Jun N-terminal kinase (JNK)-interacting proteins (JIPs)links kinesin-1 to cargo, such as reelin receptor apolipoprotein Ereceptor 2 (ApoER2, also known as LRP8) and phosphorylated b-amyloid precursor protein (APP), and MAP kinase-activating
death domain protein (MADD, also known as DENN or Rab3GDP/GTP exchange factor) acts as an adaptor between kinesin-3motors and synaptic vesicles (Hirokawa et al., 2010; Namba et al.,
2011; Schlager and Hoogenraad, 2009). Moreover, severalsignaling events, such as local changes in Ca2+ levels,phosphorylation-dependent signaling and regulated Rab GTPase
activity, have been found to influence neuronal transport andregulate the loading and unloading of cargo (Fig. 2) (Nambaet al., 2011; Saxton and Hollenbeck, 2012; Schlager and
Hoogenraad, 2009). Here, we will give two examples of bi-directional cargo adaptors that control the balance betweendynein- and kinesin-based transport and regulate selectivetransport in neurons.
Huntingtin, of which the mutated protein is implicated inHuntingon’s disease, acts as a molecular switch between dyneinand kinesin-1 motors (Caviston et al., 2011; Colin et al., 2008).
When huntingtin is phosphorylated, kinesin is recruited tovesicles, thereby biasing their movement along the microtubuletowards the plus-ends. In the unphosphorylated state, kinesin
recruitment to the vesicle is no longer stabilized, and dynein-mediated retrograde motility predominates (Colin et al., 2008).Many other lines of research support the view that kinesin- anddynein-mediated transport is modulated by phosphorylation. For
example, ERK1/2 phosphorylation of dynein intermediate chain(DIC) recruits cytoplasmic dynein to signaling endosomes forretrograde transport in axons (Mitchell et al., 2012). Moreover,
recent studies in Caenorhabditis elegans have shown that twocyclin-dependent kinases, PCT-1 and CDK-5, directly polarizetrafficking of presynaptic components by inhibiting dynein-
mediated retrograde transport and setting the balance betweenanterograde and retrograde motors (Ou et al., 2010). In contrast,in rat sensory neurons, CDK5 phosphorylation of the dynein-
interacting protein NDEL1 stimulates the cargo transportcapacity of dynein (Pandey and Smith, 2011).
Adaptor proteins that interact with the mitochondrial outersurface have been identified, and these are potential candidates to
regulate mitochondria transport throughout the neuron (Saxtonand Hollenbeck, 2012). Recent findings have demonstrated thattwo very similar motor-adaptor proteins, TRAK1 and TRAK2
utilize different machineries to transport mitochondria to axonsand dendrites (van Spronsen et al., 2013). TRAK1 binds to bothkinesin-1 and dynein and directs mitochondria into axons,
whereas TRAK2 predominantly interacts with dynein–dynactinand mediates the dendritic targeting of mitochondria. Theseresults are consistent with the polarized microtubule organization
in neurons (Baas et al., 1988). Microtubules oriented with the
plus-end outwards drive the TRAK1–dynein–kinesin complex
into axons, whereas microtubules with mixed orientations allow
transport of the TRAK2–dynein complex into dendrites.
Interestingly, these data imply that the opposing motors are
closely interlinked in axons but can act independently from one
another in dendrites. The functional differences between TRAK1
and TRAK2 are explained by conformational differences; the
backfolding of TRAK2 affects its interaction with kinesin-1. It is
tempting to speculate that conformational switching of motor
proteins (see Box 2) and motor-adaptor proteins (as described
above) can coordinate bidirectional transport, polarized
trafficking and influence local cargo movements.
Box 2. Intramolecular motor–tail communication
Communication between the motor domain and tail region is an
important aspect of motor protein regulation. Recent evidence
suggests that the tail region of dynein, through its subunits or
associated proteins, controls its own motor activity. In vitro studies
found that the legs at odd angles (Loa) mutation F580Y in the tail
of the cytoplasmic dynein heavy chain (Hafezparast et al., 2003)
inhibits motor processivity (Ori-McKenney et al., 2010). In addition,
dynein-associated protein NudE (NDE1) and Lis1 are involved in
the interaction between the tail and motor domains of dynein (Ori-
McKenney et al., 2010; Zylkiewicz et al., 2011). NudE–Lis1-
mediated communication appears to be achieved through a
significantly different mechanism from the folding mechanism for
myosin V and some kinesins, which occurs through direct
intramolecular interactions between tail and motor domains (Adio
et al., 2006; Siththanandan and Sellers, 2011). Kinesin-1
undergoes a conformational change that brings the motor
domain in close contact with its tail region as shown by
sedimentation analysis (Hackney et al., 1992). This folded,
inactive conformation of kinesin-1 blocks processive motor
movement (Cai et al., 2007). The crystal structure of kinesin-1
and subsequent biochemical experiments suggest that steric
hindrance is not the cause of inhibition, but that instead the tail
region restrains ADP release (Kaan et al., 2011). Whereas binding
to cargo was initially proposed to unfold kinesin-1 and activate its
motility (Coy et al., 1999), it is now thought that motors can be
present in an inhibited state on the cargo surface and might
alternate between active and inactive conformations in response
to external signals (Blasius et al., 2007). In addition, single-
molecule in vitro studies using quantum dots have shown that
when kinesin-1 is in a folded inhibited state it is able to passively
diffuse along microtubules (Lu et al., 2009). It is plausible that the
ability to diffuse along microtubules is a general feature of
molecular motors. Similar mechanisms have been described for
the kinesin-5 family member Eg5 (also known as KIF11), which is
involved in positioning of the mitotic spindle (Kapitein et al., 2008),
for KIF1A, a kinesin-3 family member (Hammond et al., 2009),
and for MCAK, a kinesin-13 microtubule-depolymerizing motor
(Helenius et al., 2006). The motor properties described in Box 1,
such as motor back-stepping, motor-neck–tail communication and
diffusion might allow motors to slow down and step around
obstacles to resolve ‘road blocks’ or ‘traffic jams’, and to switch to
other cytoskeletal tracks without exchanging the motors attached
to the cargo. Indeed, in disease models of Alzheimer’s and motor
neuron disease, it appears that only a small fraction of cargos are
trapped in these ‘traffic jams’, suggesting that motors could
possibly bypass these blockages (Pilling et al., 2006; Shemesh
et al., 2008).
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Microtubule transport and diseaseAs microtubule-based transport is fundamental to the
development and function of mature neurons, defects in
neuronal transport pathways are likely to cause neuronal
diseases (Chevalier-Larsen and Holzbaur, 2006; De Vos et al.,
2008; Hirokawa et al., 2010; Salinas et al., 2008). Although many
studies suggest that transport pathways have a major role in the
onset and progression of various human developmental and
neurological disorders, the causal relationship between transport
impairments and neurodegeneration is largely unclear
(Gunawardena and Goldstein, 2005; Millecamps and Julien,
2013). Several kinesin-knockout mice display specific
neurological phenotypes, such as epilepsy and hydrocephalus
(Nakajima et al., 2012; Niwa et al., 2012), and kinesin-2-related
ciliopathy, causing hydrocephalus and disturbance in
dorsoventral patterning of the neural tube (Hirokawa et al.,
2012). The identification of mutations in genes involved in
neuronal transport pathways strengthens the direct link between
transport defects and human neurological diseases (Table 1 and
Fig. 3). In this section, we will discuss a few examples of
how mutations in different tubulin isotypes and motor proteins
might lead to defective neuronal transport and trigger
neurodegeneration.
One way to impair neuronal transport is to disrupt the
underlying microtubule network (Baas et al., 2005; Conde and
Cáceres, 2009; Janke and Bulinski, 2011; Lumb et al., 2012;
Tischfield et al., 2011). Mutations in a- and b-tubulin-encodinggenes have been identified in patients suffering from a wide
spectrum of neurological disorders, ranging from microcephaly
and seizures to intellectual disabilities and peripheral neuropathy.
For instance, mutations in the a-tubulin isotype VIII gene TUBA8cause polymicrogyria with optic nerve hypoplasia (Abdollahi
et al., 2009), and mutations in the b-tubulin isotype II geneTUBB2 result in asymmetrical polymicrogyria (Jaglin et al.,
2009). Moreover, in mice, mutations in the tubulin-specific
chaperone Tbce lead to a severe deficiency of microtubules in
distal axons in progressive motor neuronopathy (Martin et al.,
2002; Schaefer et al., 2007), and mutations in the microtubule
assembly and severing protein spastin 4 (SPG4) cause hereditary
spastic paraplegia in humans (Magariello et al., 2013; Nanetti
et al., 2012). In addition, missense mutations in TUBB3, which
encodes the neuron-specific b-tubulin isotype III, cause a more
Table 1. Mutations in transport proteins underlying neurological disorders
Mutant protein Functional role Functional defect Disease Reference
Mutations in motorsDYNC1H1 (dynein) Vesicular and organelle
transportDefects in neuronal
migration; late-onsetmotor neuron degeneration
Lissencephaly; Charcot–Marie–Tooth disease 2 (CMT2);Perry syndrome; Spinalmuscular atropy
(Braunstein et al., 2010; Harmset al., 2010; Weedon et al.,2011; Willemsen et al.,2012)
KIF5A Vesicular and organelletransport
Impaired axonal transport Hereditary spastic paraplegia(SPG10); CMT2
(Crimella et al., 2012; Fügeret al., 2012)
KIF1B Synaptic vesicle transport,mitochondrial transport
Reduced transport ofsynaptic vesicle proteins
CMT2 (Gentil and Cooper, 2012;Zhao et al., 2001)
KIF21A Axonal transport of K+-dependent Na+/Ca2+
exchanger (NCKX2)
Atrophy of ocular motormuscles
Congenital fibrosis of theextraocular muscle (CFEOM)
(Desai et al., 2012; Lee et al.,2012)
Motor adaptor and regulatorprotein mutationsDCTN1/p150glued
(dynactin)Dynein regulation Impaired axonal transport;
axonal swelling; synapseretraction
Motor neuron disease;amytrophic lateral sclerosis(ALS); Perry syndrome
(Newsway et al., 2010;Stockmann et al., 2012;Uribe, 2010)
LIS1 (PAFAH1B1) Coupling of nucleus tocentrosome duringneuronal migration;dynein regulator
Impaired neuronal migration;reduced axonal transport
Lissencephaly (Mokánszki et al., 2012)
Cytoskeletal mutationsTUBA1A a-tubulin isoform Neuronal migration Lissencephaly (Cushion et al., 2013; Hikita
et al., 2013; Tischfield et al.,2011)
TUBA8 a-tubulin isoform Local cell positioningduring cerebral corticaldevelopment
Polymicrogyria with optic nervehypoplasia
(Abdollahi et al., 2009;Tischfield et al., 2011)
TUBB2B b-tubulin isoform Neuronal migration Asymmetricalpolymicrogyria
(Cushion et al., 2013;Romaniello et al., 2012;Tischfield et al., 2011)
TUBB3 b-tubulin isoform(neuron specific)
Neuronal migrations andaxon guidance defects
CFEOMFacial paralysisLate-onset axonal
sensorimotor polyneuropathy
(Poirier et al., 2010; Tischfieldet al., 2011)
TUBB5 b-tubulin isoform Neuronal migration Microcephaly (Breuss et al., 2012)TBCE Tubulin chaperone Impaired maintenance of
microtubules in motoraxons
Progressive motorneuropathy
(Martin et al., 2002; Schaeferet al., 2007)
SPG4 (spastin) Microtubule severer Synaptic growth andneurotransmission defects
Hereditary spastic paraplegia (Magariello et al., 2013;Nanetti et al., 2012)
The table is limited to mutations in motor proteins and associated proteins that have a strong genetic link to neurological disease.
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diffuse spectrum of brain malformations and neurological
disabilities, and certain phenotypes often segregate with
particular amino acid substitutions (Poirier et al., 2010;
Tischfield et al., 2010). A recent study directly investigated
whether TUBB3 mutations impair microtubule-based transport in
neurons and found that of the 14 b-tubulin mutants tested, onlytwo TUBB3 mutations directly disrupt the interaction with
kinesin motors and subsequently impair axonal transport (Niwa
et al., 2013). The other mutations in b-tubulin III probably disturbother microtubule properties, such as the stability of a-tubulin–b-tubulin heterodimers or other characteristics, including the
(de)polymerization properties of tubulin, microtubule dynamics
or MAP interactions (Tischfield et al., 2011).
Several mutations in microtubule-based motors have also been
directly linked to neurological diseases. These motor mutations
can affect specific neuronal transport routes, or involve multiple
cargos and impair multiple pathways (Chevalier-Larsen and
Holzbaur, 2006; Hirokawa et al., 2010). Kinesin motor proteins
have been directly linked to several neurodegenerative diseases.
Mutations in the motor and stalk domain of the kinesin-1 family
member KIF5A cause hereditary spastic paraplegia and Charcot–
Marie–Tooth (CMT) disease type 2 (Crimella et al., 2012; Reid
et al., 2002). Mutations in the KIF21A stalk region have been
shown to be the underlying cause of congenital fibrosis of the
extraocular muscle type 1 (CFEOM1) (Yamada et al., 2003),
which is associated with defects in the oculomotor nerve and
results in an inability to move or raise the eyes. A recent study
showed that knockdown of KIF21A causes the dysregulation of
Ca2+ at axonal boutons owing to inhibited transport of NCKX2, a
K+-dependent Na+-exchanger that is involved in Ca2+ clearance
in the large axon terminals of central neurons (Lee et al., 2012).
Moreover, a mutation in KIF1B-b, a kinesin-3 family member,was identified in CMT2 patients (Zhao et al., 2001). The
heterogyzous Kif1b-knockout mouse presents similar phenotypes,
including a chronic peripheral neuropathy with progressive motor
weakness and motor coordination, and investigation of its sciatic
nerves revealed that transport of synaptic vesicles to the distal
axon is impaired. The KIF1B-b mutation is not the only gene thatis linked to CMT2, because, so far, mutations in more than 30
genes have been identified that cause CMT disease, several of
which are linked to specific transport pathways (Gentil and
Cooper, 2012).
Cytoplasmic dynein has a pivotal role in neuronal trafficking
because it is the only microtubule-based motor protein with
minus-end-directed motility (Pfister et al., 2006). Indeed,
mutations in the dynein heavy chain gene DHC1H1 lead to
striatal atrophy, neuronal migration defects, intellectual
disability, CMT and spinal muscular atrophy (SMA)
(Braunstein et al., 2010; Harms et al., 2010; Weedon et al.,
2011; Willemsen et al., 2012). Consistent with these findings,
mutations in dynein in Drosophila and C. elegans result in
intracellular protein aggregates and behavioral abnormalities,
including locomotor impairment (Eaton et al., 2002; Koushika
et al., 2004). Furthermore, disrupting the function of dynein in
Axon
Dendrite
PolymicrogyriaLissencephalyCongenital fibrosis ofthe extraocular muscle(CFEOM)Motor neuropathy
paraplegia (HSP)Microtubule
α-tubulinβ-tubulin
TUBA8TUBA1A TUBB3
–
TUBB2B
TBCE
Spastin
TUBB5
Microencephaly
Dendrite
Charcot–Marie– Tooth 2 (CMT2)Perry syndromeDynein Dynactin
Lis1 Spinal muscular atrophy (SMA)
Amyotrohic lateral sclerosis (ALS) paraplegia (HSP)
Charcot–Marie–Tooth 2 (CMT2)
Congenital fibrosis ofthe extraocular muscle (CFEOM)
KIF1B
KIF5A KIF21A
Lissencenphaly
+
Tubulin
DyneinKinesin
– +Microtubule
– +Microtubule
– +Microtubule
Hereditary spastic
Cargo
Mitochondrion
Hereditary spastic
Fig. 3. Major transport defects in
neurons and neurological diseases.
Impaired neuronal transport can be
caused by disruption of the microtubule
network, by changes in the processivity
or activation of motor proteins, or by
effects on the binding of cargo to motor
proteins. As illustrated here, interfering
with either of these regulatory
mechanisms gives rise to neuronal
transport defects and often leads to
variety of neurological disease
phenotypes. For example, mutations in
the kinesin motor protein KIF5A have
been linked to dominant forms of the
hereditary spastic paraplegia (HSP) and
Charcot–Marie–Tooth disease type 2
(CMT2) in humans, whereas mutations in
b-tubulin isotype III gene TUBB3 leads
to the ocular motility disorder, congenital
fibrosis of the extraocular muscles type 3
(CFEOM3). Furthermore, mutations in
dynein and its accessory proteins
dynactin and Lis1 have been associated
to spinal muscular atrophy (SMA),
amytrophic lateral sclerosis (ALS)-like
motor neuron degeneration and early-
onset parkinsonism called Perry
syndrome.
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motor neurons in mice causes amyotrophic lateral sclerosis
(ALS)-like features (LaMonte et al., 2002; Teuling et al., 2008).
Mice strains with spontaneous heterozygous mutations in
DYNC1H1, such as the ‘legs at odd angles’ (Loa) and
‘cramping 1’ (Cra1) alleles, also show late-onset motor neuron
degeneration (Hafezparast et al., 2003. Recent in vitro studies
found that the Loa mutation F580Y in the tail of the mouse
cytoplasmic dynein heavy chain inhibits motor processivity (Ori-
McKenney et al., 2010). These data indicate that communication
between the motor domain and tail region is another important
aspect of motor regulation (see Box 2). Dynein is regulated by a
number of factors, such as LIS1, which, when disrupted, have
also been implicated in neurodevelopmental and neurological
diseases (Kardon and Vale, 2009). For example, missense
mutations in the dynactin gene (DCTN1) that encodes the
p150glued subunit of dynactin have been associated with both
familial and sporadic ALS (Münch et al., 2004; Puls et al., 2003;
Puls et al., 2005). Neuronal expression of mutant p150glued in
mice causes motor neuron disease, which is characterized by
defects in vesicular transport, axonal swelling and axo-terminal
degeneration (Chevalier-Larsen and Holzbaur, 2006; Lai et al.,
2007; Laird et al., 2008). It has recently been hypothesized that
the disease-causing mutations in the CAP-Gly domain of
p150glued inhibit the binding of dynactin at microtubule plus-
ends, thereby abolishing the initiation of retrograde axonal
transport (Lloyd et al., 2012; Moughamian and Holzbaur, 2012).
Interestingly, different mutations in the same microtubule-
binding domain of p150glued cause Perry syndrome, a
Parkinson-like disease that is characterized by the loss of
dopaminergic neurons (Farrer et al., 2009).
Another well-known neurological disorder that has been linked
to the dynein motor complex is lissencephaly, a developmental
brain malformation in which the surface of the brain is smooth
rather than full of folds and the disease subsequently leads to
seizures and mental retardation (Kato and Dobyns, 2003;
Kuijpers and Hoogenraad, 2011; Métin et al., 2008; Wynshaw-
Boris et al., 2010). Perturbing the levels of Lis1 causes defects in
microtubule-based processes, such as nuclear migration and
cargo transport (Pandey and Smith, 2011; Tanaka et al., 2004;
Tsai et al., 2007). Lis1 has been found to function in microtubule-
based trafficking by preparing dynein-coupled cargos for
transport by targeting it to the plus-ends of microtubules
(Egan et al., 2012; Li et al., 2005; McKenney et al., 2010; Yi
et al., 2011). Recent single-molecule and structural studies
demonstrated that Lis1 binds in between the ATPase and
microtubule-binding domains of dynein and prolongs its
attachments to microtubules (Huang and Banker, 2012). Lis1
– at least in yeast – is not required for dynein-based cargo
motility once dynein is moving, but it instead has a general role
in initiating dynein-driven motility (Egan et al., 2012). The
numerous mutations in dynein, dynactin and associated
proteins, and the broad spectrum of phenotypes, demand a
clinical re-classification of dynein-related disorders, where the
neurological phenotype must be defined not only genetically
but also by the specific cellular effects. Future studies should
aim at dissecting the complexities of the dynein structure and
its interaction with associated proteins to find out the various
mechanisms by which disease-related dynein mutations disrupt
transport functions in the central and peripheral nervous
system.
ConclusionsTransport is essential for many different processes in neurons in
order to establish and maintain polarity, for axon guidance and
regeneration, as well as for synaptic plasticity, both during
developmental stages and in the adult brain. Although the
biochemical mechanisms underlying motor proteins-based
transport are well understood, much of the regulatory processes
that act on these motors are still unknown. Many studies now
show the importance of these regulatory pathways and emphasize
the role of adaptor proteins and regulators, in particular with
relevance to diseases of the brain. However, a number of
questions remain. How does a motor find the appropriate cargo?
How many different motor types are attached to a specific cargo?
How does the cargo know when to stop and ‘unload’ its content?
Disruption of transport is thought to be an early and perhaps
causative event in Alzheimer’s disease, Huntington’s disease and
ALS, in which abnormal accumulations of cytoskeleton proteins
and organelles in axons have been observed (De Vos et al., 2008;
Millecamps and Julien, 2013). The pivotal challenges are to
identify the molecular and cellular cause of human brain
disorders that arise from intracellular transport defects and to
determine how changes in motor protein regulation impact on
neuronal structure and function. Defects in transport lead to many
different and stress-related responses in cells, making it difficult
to elucidate the exact mechanisms underlying a disease. To
better understand intracellular transport in neurons, a better
understanding of the organization and dynamics of underlying
microtubule cytoskeleton, as well as novel approaches to control
and manipulate neuronal cargo transport are required (Jenkins
et al., 2012; Kapitein et al., 2010a). The spatial and temporal
arrangement of transport complexes and the cytoskeleton along
which they move is of crucial importance in order to understand
how multiple motors can regulate the transport and delivery of
specific cargos. These findings could potentially lead to new
tools that will be useful when investigating the transport
machinery in neurodegenerative disease models. Future studies
using genetic disease mouse models will advance our
understanding of the neurodegenerative disorders. Functional
assays in primary neuronal cells from mouse models or neurons
developed from inducible pluripotent stem (IPS) cells of patients
(Abeliovich and Doege, 2009) will further help to elucidate the
specific disease mechanisms. Moreover, advances in the
discovery and synthesis of small molecules that can modulate
microtubule-based processes in the brain might offer new
therapeutic paradigms to treat neurological defects and
intervene in neurodegenerative processes. The use of the
microtubule-stabilizing drug taxol to decrease fibrotic scar
formation and promote axon regeneration in rodents after
spinal cord injury (Ertürk et al., 2007; Hellal et al., 2011) is a
promising step in this direction, and other similar approaches
hopefully will follow.
AcknowledgementsWe thank Lukas Kapitein and Phebe Wulf for critical reading of themanuscript.
FundingThe work of our laboratories is supported by Het Prinses BeatrixSpierfonds; the Netherlands Organization for Scientific Research(NWO-ALW-VICI); the Netherlands Organization for HealthResearch and Development (ZonMW-TOP); the European Science
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Foundation (EURYI); and the EMBO Young Investigators Program(YIP).
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