microbial genetic
TRANSCRIPT
Microbial Genetics
Chapter 8
Structure and Function of Genetic Material DNA & RNA
DNA• deoxyribonucleic acid
RNA• ribonucleic acid
Nucleotides• Phosphate group• Pentose sugar• Nitrogenous base
Structure of DNA
Double stranded (double helix) polymers of nucleotides 5’ to 3’ (strands are anti-parallel) Complimentary Base Pairing
• A - T• G - C
DNA Replication
Bacteria have only 1 chromosome (ccDNA) E. coli
• about 4 million base pairs• 1 mm long (1000 times longer than the cell)• DNA takes up only about 10 % of cells volume
E. coli DNA
1u 1,360u
1ft. 1,360 ft.
DNA Replication occurs at the Replication Fork (5’ to 3’) DNA Helicase 1. Leading Strand ( 5’ to 3’ )
• DNA Polymerase
2. Lagging Strand ( 5’ to 3’)• RNA Polymerase (RNA Primer)• DNA Polymerase (extends primer and digests
RNA)• DNA Ligase
• Okazaki Fragments
Bidirectional replication
Origin of replication
Termination site
Protein Synthesis
DNA mRNA Protein
Transcription Translation
Central Dogma of Molecular Genetics
Transcription
One strand of DNA is used as a template to form a complimentary strand of mRNA
mRNA ----> messenger RNA
Transcription
3 ways RNA differs from DNA
Promoter RNA Polymerase Termination Site 5’ to 3’
3 Types of RNA
1. mRNA• Contains the codons
2. rRNA• Ribosomes (70S)
3. tRNA• Transfer amino acids to the ribosomes for
protein synthesis• Anti-codon
Genetic Code
DNA
mRNA
tRNA
Triplet code
codons
anticodons
Genetic Code
Codons code for a specific amino acid 20 amino acids 3 base code - 4 bases ( A,U,G,C ) 64 possible combinations ( 43) Amino acids are coded for by more than one
codon Genetic Code is Degenerative Genetic Code is Universal
Translation
rRNA• ribosomal RNA (forms the ribosomes) (70S)
tRNA• transfer RNA (transfers amino acids to the
ribosomes for protein synthesis)• anticodon
• 3 base sequence that is complimentary to the codon on mRNA
Regulation of Gene Expression
All Genes are not always being expressed
Genes turned on all the time - Constitutive
Other genes can be regulated:• Turned On• Turned Off
lac operon
Lac - Lactose (dissacharide)• Glucose and Galactose
operon - series of structural genes all under the control of a Regulatory Gene
lac operon is normally turned off
lac operon is an Inducible operon
Tryptophan operon
Tryptophan - amino acid operon - series of structural genes all under
the control of a Regulatory Gene
Tryptophan operon is normally turned on
Tryptophan operon is a repressible operon
Mutations - a change in the base sequence of DNA
Mutations can be: 1. Harmful 2. Lethal 3. Beneficial 4. Silent (neutral)
• UUU - Phe• UUC - Phe
Types of Mutations
Normal DNA
Base Substitution MutationC
Missense Mutation
T
Nonsense Mutation
Base Substitution Mutation
Frame Shift Mutation ATG CAT GCA TGC ATT TCC TGC TTA AAA
1. Addition Mutation
AAT GCA TGC ATG CAT TTT CCT GCT TAA
Reading Frame is Shifted
2. Deletion Mutation
TGC ATG CAT GCA TTT CCT GCT TAA
Reading Frame is Shifted
Genetic Transfer in Bacteria
Genetic Transfer - results in Genetic Variation Genetic Variation - is needed for Evolution
3 Ways Genetic Transfer can occur in Bacteria• 1. Transformation
• 2. Cunjugation
• 3. Transduction
Transformation
Genes are transferred from one bacterium to another as “naked” DNA
Frederick Griffith (1928)
Griffith’s Experiment
2 Strains of Streptococcus pneumoniae
• 1. Virulent strain with a capsule - Pneumonia
• 2. Avirulent strain without a capsule - no disease
Griffith’s Experiment
Griffith’s Experiment
Griffith’s Experiment
Griffith’s Experiment
Conjugation
One bacterium passes some DNA (in a plasmid) to another bacterium
Transduction
DNA is transferred from one bacterium to another by a virus
Bacteriophage• virus that only infects bacteria