measures of microbial populations
DESCRIPTION
Measures of Microbial Populations. Quantifying the unseen. Variety of Approaches. Direct Cell Count (DCC). Petroff-Hauser Counting chamber (Hemocytometer) and Phase Contrast Microscope Sensitvity down to 10 5 cells per ml Live cells and dead cells counted equally Motility?. - PowerPoint PPT PresentationTRANSCRIPT
![Page 1: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/1.jpg)
Measures of Microbial Populations
Quantifying the unseen
![Page 2: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/2.jpg)
Variety of Approaches
![Page 3: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/3.jpg)
Direct Cell Count (DCC)
Petroff-Hauser Counting chamber (Hemocytometer) and Phase Contrast Microscope
Sensitvity down to 105 cells per ml Live cells and dead cells counted equally Motility?
![Page 4: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/4.jpg)
Viable Cell Count
Usually requires serial dilution of culture (sample)
Followed by plating technique
Sensitivity down to 300 cells per ml (or less)
Counts only “live” cell – Viable
Assumes each colony forms from a single cell
![Page 5: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/5.jpg)
Dilution and Dilution Factors
DiluentdTransferre
dTransferre
Total
dTransferre
VolumeVolume
Volume
Volume
VolumeDF
A small amount of liquid is dispersed evenly into a volume of diluent (e.g. PBS)
The new population density relative to the original is expressed as the dilution factor (DF)
DF is always less than 1, and a unit-less number (ratio)
![Page 6: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/6.jpg)
Serial Dilutions
21 DFDFDFSerial
To greatly reduce a population density, dilutions are made from dilutions!
This series of dilutions is referred to as a serial dilution
The serial dilution factor is just the product of the individual dilution factors
![Page 7: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/7.jpg)
Plating Samples and their dilutions are applied to some
solid media so that individual colonies will arise Spread plate technique and pour plate technique
![Page 8: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/8.jpg)
Counting Spread Plates
Quebec Colony Counter Each colony may arise from a
single cell or a group of cells (chain, tetrad, etc.)
Colony Forming Unit – CFU Accurate range 30-300 CFU
<30 sample size too small >300 too close to individuate
TNTC
![Page 9: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/9.jpg)
VCC
ml
CFU
ml
CFU
DFVol
CFUVCC
Plated
5
3
1059.1
)10)(1(
159
![Page 10: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/10.jpg)
Optical Density – A Bright Idea
Spectrophotometer is used to measure how much light is blocked out by bacteria in suspension
We will use OD units (absorbance) rather than Klett Units
![Page 11: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/11.jpg)
Correlation Between OD and VCC
Due to size and shape the amount of light blocked out is unique to each species
One must develop a correlation between Absorbance and CFU per ml (basically the slope of graph b)
![Page 12: Measures of Microbial Populations](https://reader038.vdocuments.us/reader038/viewer/2022102800/56812c66550346895d90f996/html5/thumbnails/12.jpg)
Today’s Exercise
1. Perform dilution and plating as per lab handout
2. Measure theOD600 of your culture
3. Divide CFU per ml (result 1) by the OD600 (result 2) to obtain CFU per ml per OD