marine ecosystems in french polynesia, a great mine for ... · lipoproteine lipase (lpl) : key...

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Marine ecosystems in French Polynesia, a great mine for microbial metabolites of biotechnological interest Xavier MOPPERT Pacific Biotech Concarneau 16th October 2015

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Page 1: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Marine ecosystems in French Polynesia, a great mine for

microbial metabolites of biotechnological interest

Xavier MOPPERT

Pacific Biotech Concarneau 16th October 2015

Page 2: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Plan

� PACIFIC BIOTECH

� Origin of strain collection

Pacific Biotech

• Exopolysaccharides

• Polyhydroxyalkanoates

• Pigments

• Secondary Metabolites with antibacterial activity

Concarneau 16th October 2015

� Conclusion and Perspectives

� Metabolites of interest

Page 3: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

PACIFIC BIOTECH

� Created in 2006

� R&D and production activities (350k€ sales in 2014)

� A collection of over 1500 strains

Pacific Biotech Concarneau 16th October 2015

� Unique Biotechnological Start- up based on Tahiti

Page 4: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Strains origin

Pacific Biotech Concarneau 16th October 2015

Page 5: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

� Kopara (microbial mats)

� Mangrove

� Deep sampling (SWAC)

Pacific Biotech

Strains origin

Concarneau 16th October 2015

Page 6: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

� Corals and algae

� Invertebrates (Shells, Black Pearl Oysters, Urshins, …)

� Fishes , Sharks, eels, Rays…

Pacific Biotech

Strains origin

Concarneau 16th October 2015

Page 7: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

� Production and commercialization of 3 EPS molecules (ExossineTM )

- Mo203 (Exo-HTM )

- Mo245 (Exo-TTM )

- Mo229 (Exo-PTM )

Induces hyaluronic acid production

Deep skin hydration

Pacific Biotech Concarneau 16th October 2015

Exopolysaccharides

Page 8: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Exopolysaccharides

Pacific Biotech

Exopolysaccharide chain

Fe2+

Nanosphere

Scanning Electronic Microscopy

EPS are good « chelators » (ion binding molecules)

Mo229 (Exo-PTM ) protects skin against pollution aggression

Concarneau 16th October 2015

Page 9: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Exopolysaccharides

Pacific Biotech Concarneau 16th October 2015

Cosmetic

ChylomicronsLipoproteins

Fatty acids Carried by

blood

LPL Stocked as triglycerides in adipose tissues

Lipoproteine lipase (LPL) : Key enzyme

A fall in LPL activity can also limit fat accumulation

Page 10: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Exopolysaccharides

Pacific Biotech Concarneau 16th October 2015

Cosmetic

High Mw RA19 EPS (3.106 Da)

Significant and dose-dependent inhibition of LPL activity

Page 11: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Exopolysaccharides

Pacific Biotech Concarneau 16th October 2015

Low Mw RA19 EPS (16.103 Da)

Significant and dose-dependent inhibition of LPL activity Conservation

Free-Radical depolymerization (French patent n° n°95 10045)

Page 12: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

� A large number of scl-PHA producing bacteria

Polyhydroxyalkanoates (Biodegradable plastics)

Exploitation license

Pacific Biotech

� 3 mcl-PHA (elastomer) producing bacteria

R&D contract dealing with a special PHA for food packaging

Concarneau 16th October 2015

Page 13: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

� Significant number of pigmented strains

Pigments

� Most interesting finding : Production of all trans - (3R, 3’R) Zeaxanthine

Pacific Biotech Concarneau 16th October 2015

Page 14: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Pigments

Pacific Biotech Concarneau 16th October 2015

� Macula : high concentration of Zeaxanthine

� Zeaxanthine protects eyes against UV radiation

� Only the all trans - (3R, 3’R) Zeaxanthine stereo-isomer shows anti-oxydant effect

� RA19 strain synthesizes the good stereoisomer

Advantage of Biotechnology vs chemical synthesis which would be lead to racemic mixture (yield /4)

Page 15: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Secondary Metabolites / antimicrobial acitivities

Pacific Biotech Concarneau 16th October 2015

Strains identified by 16 S DNA sequencing

Page 16: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Results

Strain Origin Sample Bacterial GenusInhibition Diameter (mm)

E. coli S. aureaus K. pneumoniae P. aeruginosa

381 Tahaa Kopara Bacillus 9 11 10 10

382 Tahaa Kopara Vibrio 10 13 -

407 Tahaa Lagoon Pseudomonas 11 - - -

550 Tahiti Eel Photobacterium - - - 10

PBT Tikehau Shell Pseudoalteromonas 10 13 11 10

747 Bora-Bora Deep Sea water(-900 m) Pseudoalteromonas - 13 9 -

804 Raivavae Kopara Pseudoalteromonas 10 11 11 -

1180 Moorea Lagoon Paracoccus 11 - - -

1200 Maiao Kopara Kosakonia - 11 - -

1249 Nuku Hiva Green Algae Bacillus 9 - 11 -

1344 Fakarava Kopara Serratia - - 12 -

1398 Fakarava Shark jaw Bacillus 11 - 9 -

� 18 % of active extracts

Antimicrobial activities

Pacific Biotech Concarneau 16th October 2015

Page 17: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Résultats

Souches MIC (mg/mL) vs pathogenic strainsE. coli S. aureus K. pneumoniae P. aeruginosa

382 3 ND 0,2 3407 1 ND ND ND550 ND ND ND 2PBT 0,2 0,1 1 3747 1 0,1 2 ND804 2 2 1 ND1180 0,1 ND ND ND1200 ND 1 ND ND1344 ND ND 1 ND1398 2 ND 3 ND

Pacific Biotech

Antimicrobial activities

Concarneau 16th October 2015

Page 18: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Spot turningup only for PBT strain

Résultats

Thin Layer Chromatography

Pacific Biotech Concarneau 16th October 2015

Page 19: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Strain PBT :Pseudoalteromonas piscicida sp

Results

Pacific Biotech

Activity againstPropionibacterium acne

Concarneau 16th October 2015

A few incrimated molecules :

� Depsipeptide(s)

� Glycolipide (Darapbour, et al., 2012)

� orange/brun pigment / pigmented brominated substances (Radjasa, et al., 2009)

Good candidate for more specific studies with partnership

Page 20: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

� Modification of the growing media: Iron

Résultats PBT strain

Perspectives / Optimisation :

� Controled contamination

� Diaion HP20 resin type

Pacific Biotech Concarneau 16th October 2015

Determination of optimal growth parameters :� T° = 35°C � pH = 7,6

� Salinity = 20 g/L

µ = 0,086 h-1 G = 3,06 h

Page 21: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

High potential of PACIFIC BIOTECH microorganism collection :

Bacterial Secondary Metabolites

AntibioticsAntifungal, …

Antifouling Bio pesticides Enzymes effectors

Conclusion and perspectives

4 strains with interesting antibacterial activity (2 Pseudoalteromonas, 1 Vibrio, 1 Paracoccus)

Pacific Biotech+ other promising metabolisms (Actinomycetes, Microalgae…)

Concarneau 16th October 2015

Page 22: Marine ecosystems in French Polynesia, a great mine for ... · Lipoproteine lipase (LPL) : Key enzyme A fall in LPL activity can also limit fat accumulation. Exopolysaccharides Pacific

Pacific Biotech

Thankyou for your attention

Concarneau 16th October 2015