load the nodes and modes with query pathway into memory
DESCRIPTION
START. Load the nodes and modes with query pathway into memory. Retrieve protein sequence for each node. i = i +1, looping. last pathway in pathway_db. no. yes. - PowerPoint PPT PresentationTRANSCRIPT
Loa
d th
e no
des
and
mod
es w
ith q
uery
pat
hway
in
to m
emor
y i =
i +
1, lo
opin
g
last
pat
hway
in
path
way
_db
Ret
riev
e pr
otei
n se
quen
ce f
or e
ach
node
noye
s
For
each
nod
e, f
ind
orth
ogon
al n
ode
in
the
com
pari
ng p
athw
ay. A
lign
the
mod
es a
nd n
odes
bas
ed o
n th
e or
thog
onal
nod
es
Sort
the
hits
by
over
all s
core
Gen
erat
e ov
eral
l sco
re b
y su
mm
ariz
ing
all t
he m
atch
ed
node
s an
d m
atch
ed m
odes
Gen
erat
e gr
aphi
c ou
tput
Dis
play
the
scre
en
STA
RT
EN
D
Loa
d th
e no
des
and
mod
es w
ith q
uery
pat
hway
into
m
emor
y
j = j
+1,
loop
ing
for
all p
rote
in n
odes
last
pro
tein
in
quer
y pa
thw
ay
in
pa
thw
ay_d
b
Ret
riev
e pr
otei
n se
quen
ce f
or e
ach
node
noye
s
For
each
nod
e, B
LA
STp
vs. p
rote
in_d
b to
fin
d or
thog
onal
nod
e in
the
mat
chin
g sp
ecie
sFi
t eac
h or
thol
ogou
s pr
otei
n in
to th
e hi
t pa
thw
ay, i
nher
it al
l int
erac
tion
mod
es
Stor
e th
ose
top-
hits
in th
e m
atch
ing
spec
ies
that
is a
bove
thre
shol
dFo
r ea
ch m
atch
ing
spec
ies,
gen
erat
e gr
aphi
c ou
tput
Dis
play
on
the
scre
en a
ccor
ding
to th
e or
der
of o
vera
ll sc
ore
STA
RT
E
ND