lipid%mediator%metabololipidomicslc2ms2ms%spectra%book2014%serhanlab.bwh.harvard.edu/wp-content/uploads/2018/11/spectra-boo… ·...

104
Lipid Mediator Metabololipidomics LCMSMS Spectra Book 2014 Jonathan FITZGERALD, Romain COLAS, Masakazu SHINOHARA, Jesmond DALLI and Charles SERHAN Center for Experimental TherapeuFcs and Reperfusion Injury, Harvard InsFtute of Medicine, Brigham and Women’s Hospital and Harvard Medical School, Boston, MassachuseOs 02115 U.S.A. Correspondence should be addressed to: Prof. Charles N. Serhan Harvard InsFtute of Medicine 77 Avenue Louis Pasteur, HIM 829 Boston, MA 02115. Email: [email protected] ; Tel: 6175255001; Fax: 6175255017 HARVARD MEDICAL SCHOOL BRIGHAM AND WOMEN’S HOSPITAL Version: 02142014 1/104

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Page 1: Lipid%Mediator%MetabololipidomicsLC2MS2MS%Spectra%Book2014%serhanlab.bwh.harvard.edu/wp-content/uploads/2018/11/spectra-boo… · Table&of&Contents& Lipid&Mediator&Structures&&&Stereochemistry&

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

Jonathan  FITZGERALD,  Romain  COLAS,  Masakazu  SHINOHARA,  Jesmond  DALLI  and  Charles  SERHAN  

Center  for  Experimental  TherapeuFcs  and  Reperfusion  Injury,  Harvard  InsFtute  of  Medicine,  Brigham  and  Women’s  Hospital  and  Harvard  Medical  School,  Boston,  MassachuseOs  02115  U.S.A.  

Correspondence  should  be  addressed  to:    Prof.  Charles  N.  Serhan    Harvard  InsFtute  of  Medicine    77  Avenue  Louis  Pasteur,  HIM  829      Boston,  MA  02115.  

 Email:  [email protected];  Tel:  617-­‐525-­‐5001;  Fax:  617-­‐525-­‐5017  

HARVARD MEDICAL SCHOOL

BRIGHAM AND WOMEN’S HOSPITAL

Version:  02142014   1/104  

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Table  of  Contents  

Lipid  Mediator  Structures  &  Stereochemistry   3  Arachidonic  Acid  Metabolome   4  Eicosapentaenoic  Acid  Metabolome   9  Docosahexaenoic  Acid  Metabolome   13  Aspirin-­‐Triggered  Specialized  Pro-­‐resolving  Mediators   18  Deuterium  Labeled  Internal  Standards   22  

Methods   25  OperaEonalizaEon  of  lipid  mediator  metabololipidomics   26  High  Pressure  Liquid  Chromatography     27  Mass  Spectrometry     27  Methods  validaEon   30  

Linearity  and  aHributed  internal  standard   30  Recovery,  matrix  interference  and  limit  of  detecEon   31  Repeatability  and  reproducibility   32  Chemical  stability  of  selected  endogenous  lipid  mediators  idenEfied  in  human  serum     36  

MulEple  ReacEon  Monitoring  TransiEons     37  Lipid  Mediators   38  Aspirin-­‐Triggered  Lipid  Mediators   38  Further  Metabolites  of  Lipid  Mediators   39  

Lipid  Mediator  BiosyntheEc  Pathways   40  Prostaglandins,  Leukotrienes  and  Lipoxins   41  E-­‐Series  Resolvins   42  D-­‐Series  Resolvins   43  Aspirin-­‐Triggered  D-­‐Series  Resolvins   44  ProtecEns   45  Maresins     46  

LC-­‐MS/MS  Spectra   47  Arachidonic  Acid  Metabolome   48  

Prostaglandins  &  Thromboxane   48  Leukotrienes   53  Lipoxins   57  MonoHydroxyETE  Products   61  

Eicosapentaenoic  Acid  Metabolome   65  Lipoxins   65  E-­‐Series  Resolvins   68  MonoHydroxyEPE  Products   72  

Docosahexaenoic  Acid  Metabolome   77  D-­‐Series  Resolvins   77  Maresins     83  ProtecEns   86  MonoHydroxyDHA  Products   88  

Aspirin-­‐Triggered  Specialized  Pro-­‐resolving  Mediators   93  Deuterium  Labeled  Internal  Standards   99  

2/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Lipid  Mediator    Structures  &  Stereochemistry  

3/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Arachidonic  Acid  Metabolome  

4/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Complete  

Stereo

chem

istry  

5Z,8Z,11

Z,14

Z-­‐Eicosatetraeno

ic  acid  

11-­‐oxo-­‐  

9α,15S-­‐  

dihydroxy-­‐  

5Z,13E-­‐  

prostadien

oic  acid  

9-­‐oxo-­‐  

11α,15S-­‐  

dihydroxy-­‐  

5Z,13E-­‐  

prostadien

oic  acid  

9α,11α

,15S-­‐  

trihydroxy-­‐  

5Z,13E-­‐  

prostadien

oic  acid  

Trivial  N

ame  

Arachidon

ic  acid  

Prostaglandin  D2  

Prostaglandin  E 2  

Prostaglandin  F 2

α  

Chem

ical  Nam

e  

Eicosatetraeno

ic  

acid  

11-­‐dehydro-­‐  

prostaglandin  F 2

α  

9-­‐de

hydro-­‐  

prostaglandin  F 2

α  

9α,11α

,15S-­‐  

trihydroxy-­‐  

prostaglandin  F 2

α  

Form

ula  

C 20H

32O2  

C 20H

32O5  

C 20H

32O5  

C 20H

34O5  

Structure  

Abb

reviaE

on  

AA  

PGD2  

PGE 2  

PGF 2

α  

COOH

OH

HO O

COOH

OH

O

HO

COOH

OH

HO

HO

COOH

5/104  

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Complete  

Stereo

chem

istry  

9α,�11,�15

S-­‐�  

trihydroxy-­‐  

5Z,�13E-­‐  

thromba�dien

�oic  acid  

5S,�12R

-­‐�  dihydroxy-­‐�  

6Z,�8E,�10

E,�14

Z-­‐�  

eicosatetraeno

ic  acid  

5S,�12R

,20-­‐�  

trihydroxy-­‐�  

6Z,�8E,�10

E,�14

Z-­‐�  

eicosatetraeno

ic  acid  

5S,�12R

-­‐�  dihydroxy-­‐  

�6Z,�8E,�10

E,�14

Z-­‐�  

20-­‐carbo

xy-­‐  

eicosatetraene

dioic  acid  

Trivial  N

ame  

Thrombo

xane

 B2  

Leukotrien

e  B 4

 

20-­‐hydroxy-­‐  

Leukotrien

e  B 4

 

20-­‐carbo

xy-­‐  

Leukotrien

e  B 4

 

Chem

ical  Nam

e  

9α,�11,�15

S-­‐�  

trihydroxy-­‐  

thrombo

xane

 B2  

5S,12R

-­‐  dihydroxy-­‐�  

LTB 4

 

5S,12R

,20-­‐

trihydroxy-­‐�  

LTB 4

 

5S,12R

-­‐  dihydroxy-­‐�  

20-­‐carbo

xy-­‐  

LTB 4

 

Form

ula  

C 20H

34O6  

C 20H

32O4  

C 20H

32O5  

C 20H

30O6  

Structure  

Abb

reviaE

on  

TxB 2  

LTB 4  

20-­‐OH-­‐LTB

4  

20-­‐COOH-­‐LTB

4  

COOH

OH

OHO

OH

COOH

OH

OH

COOH

OH

OH

OH

6/104  

COOH

COOH

OH

OH

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Complete  

Stereo

chem

istry  

5S,6R,15

S-­‐  

trihydroxy-­‐  

7E,9E,11

Z,13

E-­‐eicosatetraeno

ic  acid  

5S,14R

,15S-­‐  

trihydroxy-­‐  

6E,8Z,10

E,12

E-­‐  

eicosatetraeno

ic  acid  

5S,�15S-­‐  

�dihydroxy-­‐  

�6E,�8Z,�11

Z,�13

E-­‐�

eicosatetraeno

ic  acid  

5-­‐�  

hydroxy-­‐�  

6E,�8Z,�11

Z,�14

Z-­‐�  

eicosatetraeno

ic  acid  

Trivial  N

ame  

Lipo

xin  A4  

Lipo

xin  B 4

 

5S,15S-­‐  

dihydroxy-­‐  

eicosatetraeno

ic  

acid  

5-­‐  

hydroxy-­‐  

eicosatetraeno

ic  

acid  

Chem

ical  Nam

e  

5S,6R,15

S-­‐  

trihydroxy-­‐  

LXA4  

5S,14R

,15S-­‐  

trihydroxy-­‐  

LXB 4

 

5S,15S-­‐  

dihydroxy-­‐  

ETE  

5-­‐  

hydroxy-­‐  

ETE  

Form

ula  

C 20H

32O5    

C 20H

32O5  

C 20H

32O4  

C 20H

32O3  

Structure  

Abb

reviaE

on  

LXA4  

LXB 4  

5S,15S-­‐diHETE  

5-­‐HETE  

COOH

OH

HO

OH

COOH

OH

HO

OH

COOH

OH

COOH

OH

OH

7/104  

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Complete  

Stereo

chem

istry  

12-­‐�  

hydroxy-­‐�  

5Z,�8Z,�10

E,�14

Z-­‐�  

eicosatetraeno

ic  acid  

15-­‐�  

hydroxy-­‐�  

5Z,�8Z,�11

Z,�13

E-­‐�

eicosatetraeno

ic  acid  

Trivial  N

ame  

12-­‐  

hydroxy-­‐  

eicosatetraeno

ic  

acid  

15-­‐  

hydroxy-­‐  

eicosatetraeno

ic  

acid  

Chem

ical  Nam

e  

12-­‐  

hydroxy-­‐  

ETE  

15-­‐  

hydroxy-­‐  

ETE  

Form

ula  

C 20H

32O3  

C 20H

32O3  

Structure  

Abb

reviaE

on  

12-­‐HETE  

15-­‐HETE  

COOH

OH

COOH

OH

8/104  

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Eicosapentaenoic  Acid  Metabolome  

9/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Complete  

Stereo

chem

istry  

5Z,8Z,11

Z,14

Z,17

Z-­‐eicosape

ntaeno

ic  acid  

5S,�6R,�15

S-­‐�  

trihydroxy-­‐  

�7E,�9E,�11

Z,�13

E,�17

Z-­‐�

eicosape

ntaeno

ic  acid  

5S,14R

,15S-­‐  

trihydroxy-­‐  

6E,8Z,10

E,12

E,17

Z-­‐  

eicosape

ntaeno

ic  acid  

5S,�15S-­‐�  

dihydroxy-­‐  

�6E,�8Z,�11

Z,�13

E,17

Z-­‐�

eicosape

ntaeno

ic  acid  

Trivial  N

ame  

Eicosape

ntaeno

ic  

acid

 

Lipo

xin  A5  

Lipo

xin  B 5

 

5S,15S-­‐  

dihydroxy-­‐  

eicosape

ntaeno

ic  

acid  

Chem

ical  Nam

e  

Eicosape

ntaeno

ic  

acid

 

5S,6R,15

S-­‐  

trihydroxy-­‐  

LXA5  

5S,14R

,15S-­‐  

trihydroxy-­‐  

LXB 5

 

5S,15S-­‐  

dihydroxy-­‐  

EPE  

Form

ula  

C 20H

30O2  

C 20H

30O5  

C 20H

30O5  

C 20H

30O4  

Structure  

Abb

reviaE

on  

EPA  

LXA5  

LXB 5  

5S,15S-­‐diHEP

E  

COOH

OH

HO

OH

COOH

OH

HO

OH

COOH

OH

OH

COOH

10/104  

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Complete  

Stereo

chem

istry  

5S,12R

,18R

-­‐  trihydroxy-­‐  

6Z,8E,10

E,14

Z,16

E-­‐eicosape

ntaeno

ic  acid  

5S,18R

-­‐  dihydroxy-­‐  

6E,8Z,11

Z,14

Z,16

E-­‐  

eicosape

ntaeno

ic  acid  

17R,18

R-­‐  

dihydroxy-­‐  

5Z,8Z,11

Z,13

E,15

E-­‐eicosape

ntaeno

ic  acid  

5-­‐  

�hydroxy-­‐�  

6E,�8Z,�11

Z,�14

Z,�17

Z-­‐�  

eicosape

ntaeno

ic  acid  

Trivial  N

ame  

Resolvin  E1  

Resolvin  E2  

Resolvin  E3  

5-­‐  

hydroxy-­‐  

eicosape

ntaeno

ic  

acid  

Chem

ical  Nam

e  

5S,12R

,18R

-­‐trihydroxy-­‐  

EPE  

5S,18R

-­‐  dihydroxy-­‐  

EPE  

17R,18

R-­‐  

dihydroxy-­‐  

EPE  

5-­‐  

hydroxy-­‐  

EPE  

Form

ula  

C 20H

30O5  

C 20H

30O4  

C 20H

30O4  

C 20H

30O3  

Structure  

Abb

reviaE

on  

RvE1  

RvE2  

RvE3  

5-­‐HEP

E  

COOH

OH

HO

COOH

OH

11/104  

COOH

HO

OH

COOH

HO

OH

OH

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Complete  

Stereo

chem

istry  

12-­‐�  

hydroxy-­‐  

�5Z,�8Z,�10

E,�14

Z,�17

Z-­‐�  

eicosape

ntaeno

ic  acid  

15-­‐  

�hydroxy-­‐�  

5Z,�8Z,�11

Z,�13

E,�17

Z-­‐�  

eicosape

ntaeno

ic  acid  

18-­‐�  

hydroxy-­‐�  

5Z,�8Z,�11

Z,�14

Z,�16

E-­‐�  

eicosape

ntaeno

ic  acid  

Trivial  N

ame  

12-­‐  

hydroxy-­‐  

eicosape

ntaeno

ic  

acid  

15-­‐  

hydroxy-­‐  

eicosape

ntaeno

ic  

acid  

18-­‐  

hydroxy-­‐  

eicosape

ntaeno

ic  

acid  

Chem

ical  Nam

e  

12-­‐  

hydroxy-­‐  

EPE  

15-­‐  

hydroxy-­‐  

EPE  

18-­‐  

hydroxy-­‐  

EPE  

Form

ula  

C 20H

30O3  

C 20H

30O3  

C 20H

30O3  

Structure  

Abb

reviaE

on  

12-­‐HEP

E  

15-­‐HEP

E  

18-­‐HEP

E  

COOH

OH

COOH

OH

COOH

OH

12/104  

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Docosahexaenoic  Acid  Metabolome  

13/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Complete  

Stereo

chem

istry  

4Z,7Z,10

Z,13

Z,16

Z,19

Z-­‐do

cosahexaen

oic  acid  

7S,8R,17

S-­‐  

trihydroxy-­‐  

4Z,9E,11

E,13

Z,15

E,19

Z-­‐  

docosahexaen

oic  acid  

7S,16R

,17S-­‐  

trihydroxy-­‐  

4Z,8E,10

Z,12

E,14

E,19

Z-­‐  

docosahexaen

oic  acid  

4S,11R

,17S-­‐  

trihydroxy-­‐    

5Z,7E,9E,13Z,15E,19Z-­‐    

docosahexaen

oic  acid  

Trivial  N

ame  

Docosahexaeno

ic  

acid  

Resolvin  D1  

Resolvin  D2  

Resolvin  D3  

Chem

ical  Nam

e  

Docosahexaeno

ic  

acid  

7S,8R,17

S-­‐trihydroxy-­‐  

DHA  

7S,16R

,17S-­‐

trihydroxy-­‐  

DHA  

4S,11R

,17S-­‐

trihydroxy-­‐  

DHA  

Form

ula  

C 22H

32O2  

C 22H

32O5  

C 22H

32O5  

C 22H

32O5  

Structure  

Abb

reviaE

on  

DHA  

RvD1  

RvD2  

RvD3  

COOH

OH

HO

HO

COOH

14/104  

COOH

HO

OH

OH

OH

HO

COOH

HO

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Complete  

Stereo

chem

istry  

4S,5,17S-­‐  

trihydroxy-­‐  

6E,8E,10

Z,13

Z,15

E,19

Z-­‐  

docosahexaen

oic  acid  

7S,17S-­‐  

dihydroxy-­‐  

4Z,8E,10

Z,13

Z,15

E,19

Z-­‐  

docosahexaen

oic  acid  

4S,17S-­‐  

dihydroxy-­‐  

5E,7Z,10

Z,13

Z,15

E,19

Z-­‐  

docosahexaen

oic  acid  

7R,14S-­‐  

dihydroxy-­‐  

4Z,8E,10

E,12

Z,16

Z,19

Z-­‐do

cosahexaen

oic  acid  

Trivial  N

ame  

Resolvin  D4  

Resolvin  D5  

Resolvin  D6  

Maresin  1  

Chem

ical  Nam

e  

4S,5R,17

S-­‐  

trihydroxy-­‐  

DHA  

7S,17S-­‐  

dihydroxy-­‐  

DHA  

4S,17S-­‐  

dihydroxy-­‐  

DHA  

7R,14S-­‐  

dihydroxy-­‐  

DHA  

Form

ula  

C 22H

32O5  

C 22H

32O4  

C 22H

32O4  

C 22H

32O4  

Structure  

Abb

reviaE

on  

RvD4  

RvD5  

RvD6  

MaR

1  

COOH

HO

HO

15/104  

OH

OH

COOH

OH

OH

OH

HOOC

OH

OH

HOOC

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Complete  

Stereo

chem

istry  

4S,14S-­‐  

dihydroxy-­‐  

5E,7Z,10

Z,12

E,16

Z,19

Z-­‐do

cosahexaen

oic  acid  

10R,17

S-­‐  

dihydroxy-­‐  

4Z,7Z,11

E,13

E,15

Z,19

Z-­‐  

docosahexaen

oic  acid  

4-­‐�hydroxy-­‐�  

5E,�7Z,�10

Z,�13

Z,�16

Z,�19

Z-­‐�  

docosahexaen

oic  acid  

7-­‐�hydroxy-­‐�  

4Z,�8E,�10

Z,�13

Z,�16

Z,�19

Z-­‐�  

docosahexaen

oic  acid  

Trivial  N

ame  

4,14-­‐diHDHA  

[Neu

ro]  

ProtecFn

 D1  

4-­‐hydroxy-­‐  

DHA  

7-­‐hydroxy-­‐  

DHA  

Chem

ical  Nam

e  

4S,14S-­‐  

dihydroxy-­‐  

DHA  

10R,17

S-­‐  

dihydroxy-­‐  

DHA  

4-­‐hydroxy-­‐  

DHA  

7-­‐hydroxy-­‐  

DHA  

Form

ula  

C 22H

32O4  

C 22H

32O4  

C 22H

32O3  

C 22H

32O3  

Structure  

Abb

reviaE

on  

4S,14S-­‐diHDHA  

PD1  

4-­‐HDHA  

7-­‐HDHA  

COOH

OH

OH

COOH

OH

OH

COOH

OH

COOH

OH

16/104  

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Complete  

Stereo

chem

istry  

14-­‐�hydroxy-­‐�  

4Z,�7Z,�10

Z,�12

E,�16

Z,�19

Z-­‐�  

docosahexaen

oic  acid  

17-­‐�hydroxy-­‐�  

4Z,�7Z,�10

Z,�13

Z,�15

E,�19

Z-­‐�  

docosahexaen

oic  acid  

Trivial  N

ame  

14-­‐hydroxy-­‐  

DHA  

17-­‐hydroxy-­‐  

DHA  

Chem

ical  Nam

e  

14-­‐hydroxy-­‐  

DHA  

17-­‐hydroxy-­‐  

DHA  

Form

ula  

C 22H

32O3  

C 22H

32O3  

Structure  

Abb

reviaE

on  

14-­‐HDHA  

17-­‐HDHA  

OH

COOH

COOH

OH

17/104  

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Aspirin-­‐Triggered    Specialized  Pro-­‐resolving  Mediators  

18/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Complete  

Stereo

chem

istry  

5S,6R,15

R-­‐  

trihydroxy-­‐  

7E,9E,11

Z,13

E-­‐eicosatetraeno

ic  acid  

5S,14R

,15R

-­‐  trihydroxy-­‐  

6E,8Z,10

E,12

E-­‐  

eicosatetraeno

ic  acid  

7S,8R,17

R-­‐  

trihydroxy-­‐  

4Z,9E,11

E,13

Z,15

E,19

Z-­‐  

docosahexaen

oic  acid  

7S,16R

,17R

-­‐  trihydroxy-­‐  

4Z,8E,10

Z,12

E,14

E,19

Z-­‐do

cosahexaen

oic  acid    

Trivial  N

ame  

15-­‐epi-­‐Lipoxin  A

4  

15-­‐epi-­‐Lipoxin  B

4  

Aspirin-­‐triggered

 Re

solvin  D1  

Aspirin-­‐triggered

 Re

solvin  D2    

Chem

ical  Nam

e  

5S,6R,15

R-­‐  

trihydroxy-­‐  

LXA4  

5S,14R

,15R

-­‐  trihydroxy-­‐  

LXB 4

 

7S,8R,17

R-­‐trihydroxy-­‐  

DHA  

7S,16R

,17R

-­‐trihydroxy-­‐  

DHA    

Form

ula  

C 20H

32O5  

C 20H

32O5  

C 22H

32O5  

C 22H

32O5    

Structure  

Abb

reviaE

on  

AT-­‐LXA

4  

AT-­‐LXB

4  

AT-­‐RvD

1  

AT-­‐RvD

2  

COOH

OH

HO

OH

COOH

OH

HO

OH

COOH

OH

HO

HO

19/104  

COOH

OH

HO

OH

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Complete  

Stereo

chem

istry  

4S,11R

,17R

-­‐  trihydroxy-­‐  

5Z,7E,9E,13Z,15E,19Z-­‐    

docosahexaen

oic  acid  

4S,5,17R

-­‐  trihydroxy-­‐  

6E,8E,10

Z,13

Z,15

E,19

Z-­‐  

docosahexaen

oic  acid  

7S,17R

-­‐  dihydroxy-­‐  

4Z,8E,10

Z,13

Z,15

E,19

Z-­‐  

docosahexaen

oic  acid  

4S,17R

-­‐  dihydroxy-­‐  

5E,7Z,10

Z,13

Z,15

E,19

Z-­‐  

docosahexaen

oic  acid  

Trivial  N

ame  

Aspirin-­‐triggered

 Re

solvin  D3  

Aspirin-­‐triggered

 Re

solvin  D4  

Aspirin-­‐triggered

 Re

solvin  D5  

Aspirin-­‐triggered

 Re

solvin  D6  

Chem

ical  Nam

e  

4S,11R

,17R

-­‐trihydroxy-­‐  

DHA  

4S,5,17R

-­‐  trihydroxy-­‐  

DHA  

7S,17R

-­‐  dihydroxy-­‐  

DHA  

4S,17R

-­‐  dihydroxy-­‐  

DHA  

Form

ula  

C 22H

32O5  

C 22H

32O5  

C 22H

32O4  

C 22H

32O4  

Structure  

Abb

reviaE

on  

AT-­‐RvD

3  

AT-­‐RvD

4  

AT-­‐RvD

5  

AT-­‐RvD

6  

HOOC

OH

OH

OH

COOH

HO

HO

20/104  

OH

HO

COOH

HO

OH

OH

HOOC

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Complete  

Stereo

chem

istry  

10R,17

R-­‐  

dihydroxy-­‐  

4Z,7Z,11

E,13

E,15

Z,19

Z-­‐  

docosahexaen

oic  acid  

Trivial  N

ame  

Aspirin-­‐triggered

 [Neu

ro]  

ProtecFn

 D1  

Chem

ical  Nam

e  

10R,17

R-­‐  

dihydroxy-­‐  

DHA  

Form

ula  

C 22H

32O4  

Structure  

Abb

reviaE

on  

AT-­‐PD1  

COOH

OH

OH

21/104  

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Deuterium  Labeled    Internal  Standards  

22/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Complete  

Stereo

chem

istry  

9-­‐oxo-­‐  

11α,15S-­‐  

dihydroxy-­‐  

5Z,13E-­‐  

3,3,4,4-­‐d 4-­‐  

prostadien

oic  acid  

5S,6R,15

S-­‐  

trihydroxy-­‐  

7E,9E,11

Z,13

E-­‐  

19,�19,�20,�20,�20-­‐�d

5-­‐  

eicosatetraeno

ic  acid  

5S,�12R

-­‐�  dihydroxy-­‐�  

6Z,�8E,�10

E,�14

Z-­‐�  

6,�7,�14,�15-­‐�d 4-­‐    

eicosatetraeno

ic  acid  

5S-­‐�  

hydroxy-­‐�  

6E,�8Z,�11

Z,�14

Z-­‐�  

5,6,8,9,11,12,14,15-­‐�d 8-­‐    

eicosatetraeno

ic  acid  

Trivial  N

ame  

d 4-­‐Prostagland

in  E

2  

d 5-­‐Lipoxin  A

4  

d 4-­‐Leu

kotriene

 B4  

d 8-­‐5S-­‐  

hydroxy-­‐  

eicosatetraeno

ic  

acid  

Chem

ical  Nam

e  

9-­‐de

hydro-­‐  

prostaglandin  F 2

α-­‐d 4

 

5S,6R,15

S-­‐  

trihydroxy-­‐  

LXA4-­‐d 5

 

5S,12R

-­‐  dihydroxy-­‐�  

LTB 4-­‐d

4  

5S-­‐  

hydroxy-­‐  

ETE-­‐d 8

 

Form

ula  

C 20H

28D4O

5  

C 20H

27D5O

5    

C 20H

28D4O

4  

C 20H

24D8O

3  

Structure  

Abb

reviaE

on  

d 4-­‐PGE 2  

d 5-­‐LXA

4  

d 4-­‐LTB

4  

d 8-­‐5S-­‐HETE  

COOH

OH

OH

DD

D

D

COOH

OH

O

HO

DD

DD

COOH

OH

HO

OH

D

D

DD

D

COOH

OH

DD

DD

DD

DD

23/104  

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Complete  

Stereo

chem

istry  

7S,16R

,17S-­‐  

trihydroxy-­‐  

4Z,8E,10

Z,12

E,14

E,19

Z-­‐19

,19,20

,20,20

,20-­‐d 5-­‐

docosahexaen

oic  acid    

Trivial  N

ame  

d 5-­‐Resolvin  D2  

Chem

ical  Nam

e  

7S,16R

,17S-­‐

trihydroxy-­‐  

DHA  -­‐d

5  

Form

ula  

C 22H

27D5O

5  

Structure  

Abb

reviaE

on  

d 5-­‐RvD

2  

24/104  

COOH

OH

HO

OH D D

D

DD

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Methods  

25/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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26/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Auto-­‐extracFon  (Solid  Phase  Extrac6on)  

Samples  

LC-­‐MS-­‐MS  

Targeted  MRM  and  EPI  

Data  dependent  scan/EMS/MSn  

IdenFficaFon  

Matching  to  LM  database    (RT+  ≥  6  diagnos6c  ions)  

QuanFtaFon  

Deuterated  internal  standards  

Synthesis  of  authenFc  and  syntheFc  deuterated  

standards  

ConstrucFon  of  authenFc  and  syntheFc  SPM  and  eicosanoids  

database  

MSn  

Tissue  validaFon  and  reference  human  samples  

(i.e.  SRM1950)  

ComputaFonal  data  analysis  

Cluster  analysis  

Principal  component    analysis  

Cells,  Fssues,  organs  and  individual  profiles  

LM  profiles  (>55)  Targeted  bioacFve  metabolomes  

OperaEonalizaEon  of  lipid  mediator  metabololipidomics    

IdenFficaFon  and  signature  profiles  for  pro-­‐resolving  and  inflammatory  lipid  mediators  in  human  Fssue    Colas  RA,  Shinohara  M,  Dalli  J,  Chiang  N,  Serhan  CN.  Am  J  Physiol  Cell  Physiol.  2014  

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Table  1:  High  Performance  Liquid  Chromatography  sesngs.  

Table   2:   Mass   Spectrometer   sesngs   for  MulFple   ReacFon  Monitoring   and   Enhance  Product  Ion  for  AB  Sciex  5500  Q  TRAP.  

27/104  

Shimadzu  LC20AD  HPLC  Sesngs  

Solvent  A   H2O  (0.01%  aceFc  acid)  

Solvent  B   Methanol  (0.01%  aceFc  acid)  

Flow  rate   0.4mL/min  

Column   Eclipse  plus  C18,  1.8  µm,  4.6  x  100  mm,  AGILENT    

Column  Heater   ThermaSphere  TS-­‐130,  50°C,  PHENOMENEX  

Gradient  

Time  (min)   Solvent  (%B)  0.0   55  2.0   55  10.0   85  18.0   98  20.0   98  20.1   55  24.5   End  

AB  Sciex  5500  Q  TRAP  MS  sesng  for  MRM  and  EPI

MRM EPI Curtain  Gas 25 25 Collision  Gas Medium Medium Ion  Spray  Voltage -­‐4000 -­‐4000 Temperature 500  °C 500  °C Ion  Source  Gas  1 40 40 Ion  Source  Gas  2 40 40

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Table   3:  Mass   Spectrometer   sesngs   for  MulFple   ReacFon  Monitoring   and   Enhance  Product  Ion  for  AB  Sciex  6500  Q  TRAP.  

AB  Sciex  6500  Q  TRAP  MS  sesng  for  MRM  and  EPI  

MRM   EPI  Curtain  Gas   30   30  Collision  Gas   Medium   Medium  Ion  Spray  Voltage   -­‐4500   -­‐4500  Temperature   580  °C   580  °C  Ion  Source  Gas  1   80   80  Ion  Source  Gas  2   70   70  

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Table  4:  Mass  Spectrometer  sesngs  for  MulFple  ReacFon  Monitoring  forAB  Sciex  5500  Q  TRAP.   DP=Declustering   PotenFal,   EP=Entrance   potenFal,   CE=Collision   Energy,  CXP=Collision  Cell  Exit  PotenFal  

28/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

AB  Sciex  5500  Q  TRAP  Individual  lipid  mediator,  pathway  marker,  and  further  metabolite  sesng  for  MRM  (V)  

Compound   DP   EP   CE   CXP  AA   -­‐90   -­‐10   -­‐41   -­‐22  PGD2   -­‐80   -­‐10   -­‐30   -­‐15  PGE2   -­‐80   -­‐10   -­‐30   -­‐15  PGF2α   -­‐80   -­‐10   -­‐30   -­‐15  TxB2   -­‐80   -­‐10   -­‐30   -­‐15  LTB4   -­‐110   -­‐10   -­‐22   -­‐17  20-­‐OH-­‐LTB4   -­‐100   -­‐10   -­‐26   -­‐17  20-­‐COOH-­‐LTB4   -­‐90   -­‐10   -­‐26   -­‐17  LXA4   -­‐95   -­‐10   -­‐22   -­‐11  LXB4   -­‐90   -­‐10   -­‐30   -­‐21  5,15-­‐diHETE   -­‐110   -­‐10   -­‐22   -­‐17  5-­‐HETE   -­‐90   -­‐10   -­‐21   -­‐22  12-­‐HETE   -­‐70   -­‐10   -­‐21   -­‐15  15-­‐HETE   -­‐65   -­‐10   -­‐19   -­‐18  

EPA   -­‐90   -­‐10   -­‐41   -­‐22  LXA5   -­‐95   -­‐10   -­‐22   -­‐11  LXB5   -­‐90   -­‐10   -­‐30   -­‐21  5,15-­‐diHEPE   -­‐110   -­‐10   -­‐22   -­‐17  RvE1   -­‐80   -­‐10   -­‐24   -­‐16  RvE2     -­‐40   -­‐10   -­‐22   -­‐17  RvE3   -­‐40   -­‐10   -­‐22   -­‐17  5-­‐HEPE   -­‐60   -­‐10   -­‐22   -­‐11  12-­‐HEPE   -­‐70   -­‐10   -­‐21   -­‐15  15-­‐HEPE   -­‐65   -­‐10   -­‐19   -­‐8  18-­‐HEPE   -­‐65   -­‐10   -­‐18   -­‐23  

DHA   -­‐90   -­‐10   -­‐41   -­‐22  RvD1   -­‐90   -­‐10   -­‐22   -­‐13  RvD2     -­‐90   -­‐10   -­‐24   -­‐13  RvD3   -­‐80   -­‐10   -­‐28   -­‐19  RvD5   -­‐40   -­‐10   -­‐22   -­‐17  RvD6   -­‐40   -­‐10   -­‐22   -­‐17  MaR1   -­‐40   -­‐10   -­‐22   -­‐17  4,14-­‐diHDHA   -­‐40   -­‐10   -­‐22   -­‐17  PD1   -­‐40   -­‐10   -­‐22   -­‐17  4-­‐HDHA   -­‐40   -­‐10   -­‐18   -­‐13  7-­‐HDHA   -­‐40   -­‐10   -­‐18   -­‐13  14-­‐HDHA   -­‐70   -­‐10   -­‐21   -­‐15  17-­‐HDHA   -­‐80   -­‐10   -­‐20   -­‐18  

d4-­‐PGE2   -­‐80   -­‐10   -­‐30   -­‐11  d4-­‐LXA4   -­‐135   -­‐10   -­‐24   -­‐17  d4-­‐LTB4   -­‐135   -­‐10   -­‐24   -­‐17  d8-­‐5S-­‐HETE   -­‐100   -­‐10   -­‐22   -­‐11  

d5-­‐RvD2   -­‐90   -­‐10   -­‐24   -­‐13  

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AB  Sciex  6500  Q  TRAP  Individual  lipid  mediator,  pathway  marker,  and  further  metabolite  sesng  for  MRM  (V)  

Compound   DP   EP   CE   CXP  AA   -­‐10.0   -­‐10.0   -­‐10.0   -­‐12.0  PGD2   -­‐30.0   -­‐10.0   -­‐22.0   -­‐8.0  PGE2   -­‐30.0   -­‐10.0   -­‐22.0   -­‐8.0  PGF2a   -­‐60.0   -­‐10.0   -­‐33.3   -­‐12.0  TxB2   -­‐70.0   -­‐10.0   -­‐25.0   -­‐22.0  LTB4   -­‐45.0   -­‐10.0   -­‐21.0   -­‐10.8  20-­‐OH-­‐LTB4   -­‐60.0   -­‐10.0   -­‐22.0   -­‐8.0  20-­‐COOH-­‐LTB4   -­‐60.0   -­‐10.0   -­‐22.0   -­‐8.0  LXA4   -­‐30.0   -­‐10.0   -­‐18.2   -­‐10.0  LXB4   -­‐45.0   -­‐10.0   -­‐21.5   -­‐12.0  5,15-­‐diHETE   -­‐35.0   -­‐10.0   -­‐18.0   -­‐12.0  5-­‐HETE   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  12-­‐HETE   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  15-­‐HETE   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  

EPA   -­‐10.0   -­‐10.0   -­‐10.0   -­‐12.0  LXA5   -­‐30.0   -­‐10.0   -­‐18.6   -­‐10.0  LXB5   -­‐30.0   -­‐10.0   -­‐21.2   -­‐10.0  5,15-­‐diHEPE   -­‐30.0   -­‐12.0   -­‐17.0   -­‐12.0  RvE1   -­‐50.0   -­‐10.0   -­‐21.1   -­‐10.0  RvE2     -­‐30.0   -­‐12.0   -­‐18.6   -­‐10.0  RvE3   -­‐35.0   -­‐10.0   -­‐20.5   -­‐14.0  5-­‐HEPE   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  12-­‐HEPE   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  15-­‐HEPE   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  18-­‐HEPE   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  

DHA   -­‐10.0   -­‐10.0   -­‐10.0   -­‐12.0  RvD1   -­‐40.0   -­‐10.0   -­‐19.0   -­‐9.0  RvD2     -­‐40.0   -­‐10.0   -­‐27.8   -­‐10.0  RvD3   -­‐55.0   -­‐10.0   -­‐24.6   -­‐9.5  RvD5   -­‐42.0   -­‐10.0   -­‐18.0   -­‐11.0  RvD6   -­‐50.0   -­‐10.0   -­‐20.0   -­‐11.0  MaR1   -­‐38.0   -­‐10.0   -­‐19.6   -­‐11.0  4,14-­‐diHDHA   -­‐50.0   -­‐10.0   -­‐20.0   -­‐11.0  PD1   -­‐45.0   -­‐10.0   -­‐20.8   -­‐9.5  4-­‐HDHA   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  7-­‐HDHA   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  14-­‐HDHA   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  17-­‐HDHA   -­‐30.0   -­‐10.0   -­‐18.0   -­‐9.5  

d4-­‐PGE2   -­‐30.0   -­‐10.0   -­‐26.0   -­‐14.0  d4-­‐LXA4   -­‐40.0   -­‐10.0   -­‐17.5   -­‐7.5  d4-­‐LTB4   -­‐55.0   -­‐10.0   -­‐21.7   -­‐10.0  d8-­‐5S-­‐HETE   -­‐40.0   -­‐10.0   -­‐24.0   -­‐12.0  d5-­‐RvD2   -­‐40.0   -­‐10.0   -­‐20.3   -­‐13.0  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Table  5:  Mass  Spectrometer  sesngs  for  MulFple  ReacFon  Monitoring  for  AB  Sciex  5500  Q  TRAP.   DP=Declustering   PotenFal,   EP=Entrance   potenFal,   CE=Collision   Energy,  CXP=Collision  Cell  Exit  PotenFal  

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Compound  name   Linear  equaEon   r2   Internal  standard  RvD1   y=0.00002081x   0.999   d5-­‐RvD2  RvD2   y=0.00009118x   0.997   d5-­‐RvD2  RvD3   y=0.000008163x   0.990   d5-­‐RvD2  RvD5   y=0.00001137x   0.993   d4-­‐LTB4  PD1   y=0.00001425x   0.995   d4-­‐LTB4  MaR1   y=0.00007534x   0.999   d4-­‐LTB4  

17-­‐HDHA   y=0.00001132x   0.996   d8-­‐5HETE  14-­‐HDHA   y=0.00001916x   0.999   d8-­‐5HETE  7-­‐HDHA   y=0.00001096x   0.996   d8-­‐5HETE  4-­‐HDHA   y=0.00001040x   0.996   d8-­‐5HETE  LXA5   y=0.00002043x   0.999   d5-­‐LXA4  RvE1   y=0.00004358x   0.999   d5-­‐LXA4  RvE2   y=0.0001647x   0.996   d4-­‐LTB4  RvE3   y=0.0001047x   0.998   d4-­‐LTB4  

18-­‐HEPE   y=0.00002131x   0.998   d8-­‐5HETE  15-­‐HEPE   y=0.00002002x   0.999   d8-­‐5HETE  12-­‐HEPE   y=0.00001899x   0.997   d8-­‐5HETE  5-­‐HEPE   y=0.00001301x   0.998   d8-­‐5HETE  LXA4   y=0.00001607x   0.996   d5-­‐LXA4  LXB4   y=0.00007325x   0.995   d5-­‐LXA4  

5S,15S-­‐diHETE   y=0.00008011x   0.997   d4-­‐LTB4  LTB4   y=0.00001074x   0.991   d4-­‐LTB4  

20-­‐OH-­‐LTB4   y=0.00001524x   0.999   d4-­‐LTB4  20-­‐COOH-­‐LTB4   y=0.00007931x   0.999   d4-­‐LTB4  

PGD2   y=0.00001019x   0.993   d4-­‐PGE2  PGE2   y=0.00001698x   0.998   d4-­‐PGE2  PGF2α   y=0.00001643x   0.997   d4-­‐PGE2  TXB2   y=0.00001054x   0.997   d4-­‐PGE2  

15-­‐HETE   y=0.00001377x   0.999   d8-­‐5HETE  12-­‐HETE   y=0.00001142x   0.994   d8-­‐5HETE  5-­‐HETE   y=0.00001010x   0.990   d8-­‐5HETE  

Table   6:   Linear   equaFon,   coefficient   of   determinaFon   (r2)   and  aOributed  internal  standard  

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Recovery  (%)  in  plasma  

Interference  (%  signal  remaining)  

LOD  5500  (pg)  in    

LOD  6500  (pg)  in  

Internal  standards   phase   plasma   phase   plasma  d5-­‐RvD2   73   ±   16   28   ±   9   0.17   0.43   0.04   0.09  d5-­‐LXA4   75   ±   2   7   ±   2   0.10   0.25   0.02   0.05  d4-­‐LTB4   80   ±   3   18   ±   2   0.10   0.51   0.05   0.22  d4-­‐PGE2   63   ±   13   21   ±   6   0.19   0.47   0.09   0.23  d8-­‐5S-­‐HETE   68   ±   3   28   ±   5   0.10   0.26   0.07   0.15  d5-­‐authenEc  lipid  mediators  d5-­‐10S,17S-­‐diHDHA   88   ±   4   8   ±   2   0.06   0.45   0.03   0.15  d5-­‐5S,15S-­‐diHEPE   94   ±   6   9   ±   5   0.13   0.95   0.03   0.15  d5-­‐15-­‐HEPE   63   ±   12   26   ±   4   0.09   0.23   0.10   0.19  

Table  7:  DeterminaFon  of   recovery,   interference  and   LOD.  Plasma   recoveries,   interference  and  limit   of   detecFon   (LOD)   of   the   internal   standards   and   authenFc   d5-­‐lipid   mediators   used   as  representaFve  of   specific  chromatographic   regions  and  physical  properFes  of   compounds.   LOD  was  assessed  in  phase  and  in  the  matrix.  Mean  ±  SEM,  n  =  6  for  recoveries  and  interference,  d  =  3  for  LOD.    

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Compound  name    

Nominal  concentraEon  

(pg)    

Intraday  (repeatability)     Interday  (reproducibility)    

Measured  (pg)   %RSD   Accuracy   Measured  (pg)   %RSD   Accuracy  RvD1   5   5.0   ±   0.1   1%   99%   4.6   ±   0.1   2%   92%  

20   17.2   ±   0.7   7%   86%   23.2   ±   0.7   5%   84%  100   109.8   ±   2.2   4%   90%   118.5   ±   1.8   3%   82%  200   227.8   ±   2.5   2%   86%   233.5   ±   1.8   2%   83%  

RvD2   5   5.2   ±   0.1   4%   96%   4.6   ±   0.1   4%   93%  20   16.9   ±   0.7   7%   85%   22.6   ±   0.5   4%   87%  100   113.0   ±   2.3   4%   87%   116.5   ±   1.6   3%   84%  200   227.8   ±   3.1   3%   86%   235.5   ±   2.5   2%   82%  

RvD3   5   5.7   ±   0.1   3%   86%   5.4   ±   0.1   4%   91%  20   19.8   ±   0.5   4%   99%   26.0   ±   0.3   2%   70%  100   118.3   ±   1.4   2%   82%   125.3   ±   0.9   2%   75%  200   226.8   ±   2.2   2%   87%   226.8   ±   1.7   1%   87%  

RvD5   5   4.8   ±   0.1   5%   97%   4.6   ±   0.04   2%   93%  20   16.7   ±   0.6   6%   83%   24.0   ±   0.3   2%   80%  100   114.3   ±   0.8   1%   86%   117.0   ±   0.0   0%   83%  200   217.0   ±   2.6   2%   92%   217.0   ±   2.4   2%   92%  

PD1   5   4.6   ±   0.1   5%   93%   4.4   ±   0.05   2%   88%  20   16.7   ±   0.3   3%   84%   23.7   ±   0.5   4%   82%  100   114.0   ±   0.7   1%   86%   118.5   ±   1.0   2%   82%  200   218.5   ±   1.3   1%   91%   220.0   ±   1.3   1%   90%  

MaR1   5   4.6   ±   0.2   9%   91%   4.2   ±   0.02   1%   85%  20   16.1   ±   0.1   1%   81%   22.3   ±   0.5   4%   89%  100   107.0   ±   3.5   7%   93%   110.8   ±   1.4   3%   89%  200   221.3   ±   2.3   2%   89%   229.0   ±   1.8   2%   86%  

17-­‐HDHA   5   3.5   ±   0.1   4%   69%   4.4   ±   0.05   2%   87%  20   17.8   ±   0.3   3%   89%   23.7   ±   0.8   6%   82%  100   115.0   ±   1.1   2%   85%   120.0   ±   0.6   1%   80%  200   222.0   ±   1.2   1%   89%   227.5   ±   1.6   1%   86%  

14-­‐HDHA   5   3.2   ±   0.1   5%   64%   4.3   ±   0.02   1%   86%  20   17.3   ±   0.4   4%   86%   22.2   ±   0.4   3%   89%  100   114.8   ±   2.4   4%   85%   109.5   ±   2.3   4%   91%  200   212.3   ±   2.3   2%   94%   233.5   ±   0.9   1%   83%  

7-­‐HDHA   5   3.5   ±   0.1   4%   70%   4.5   ±   0.1   3%   90%  20   19.7   ±   0.1   1%   99%   25.8   ±   0.4   3%   71%  100   123.8   ±   2.3   4%   76%   128.0   ±   2.5   4%   72%  200   236.5   ±   1.0   1%   82%   240.5   ±   2.4   2%   80%  

4-­‐HDHA   5   3.6   ±   0.1   6%   73%   4.6   ±   0.02   1%   91%  20   19.8   ±   0.3   2%   99%   26.0   ±   0.3   2%   70%  100   125.8   ±   2.0   3%   74%   128.5   ±   1.6   2%   72%  200   236.3   ±   2.1   2%   82%   240.3   ±   1.4   1%   80%  

Table   8   (part   1/4):   Precision   and   accuracy   of   LM  metabololipidomics.  %RSD,   relaFve   standard  deviaFon;  %RSD  =  (SEM/mean)  x  100;  mean  ±  SEM;  n  =  4    

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Table   8   (part   2/4):   Precision   and   accuracy   of   LM  metabololipidomics.  %RSD,   relaFve   standard  deviaFon;  %RSD  =  (SEM/mean)  x  100;  mean  ±  SEM;  n  =  4    

Compound  name    

Nominal  concentraEon  

(pg)    

Intraday  (repeatability)     Interday  (reproducibility)    

Measured  (pg)   %RSD   Accuracy   Measured  (pg)   %RSD   Accuracy  LXA5   5   5.6   ±   0.1   2%   87%   5.0   ±   0.1   4%   99%  

20   18.0   ±   0.3   3%   90%   21.6   ±   0.7   6%   92%  100   111.0   ±   2.6   5%   89%   110.3   ±   1.9   3%   90%  200   212.3   ±   2.8   3%   94%   240.3   ±   3.3   3%   80%  

RvE1   5   5.8   ±   0.1   4%   85%   5.1   ±   0.1   3%   99%  20   17.4   ±   0.1   1%   87%   24.3   ±   0.3   2%   78%  100   113.3   ±   2.3   4%   87%   121.8   ±   1.7   3%   78%  200   242.0   ±   3.7   3%   79%   241.8   ±   1.7   1%   79%  

RvE2   5   5.5   ±   0.4   14%   91%   4.7   ±   0.1   3%   93%  20   16.4   ±   0.7   8%   82%   20.7   ±   0.7   6%   97%  100   108.8   ±   2.8   5%   91%   101.2   ±   2.9   6%   99%  200   199.3   ±   3.3   3%   100%   240.0   ±   1.1   1%   80%  

RvE3   5   6.1   ±   0.3   8%   78%   5.0   ±   0.4   16%   99%  20   17.8   ±   1.7   17%   89%   23.7   ±   1.6   12%   81%  100   105.0   ±   3.0   6%   95%   116.5   ±   1.0   2%   84%  200   218.5   ±   3.4   3%   91%   227.8   ±   3.1   3%   86%  

18-­‐HEPE   5   4.1   ±   0.1   3%   82%   4.3   ±   0.03   2%   87%  20   17.6   ±   0.2   2%   88%   23.3   ±   0.5   4%   83%  100   117.5   ±   2.0   3%   83%   121.3   ±   1.5   2%   79%  200   239.0   ±   2.3   2%   81%   241.8   ±   1.5   1%   79%  

15-­‐HEPE   5   4.3   ±   0.1   3%   87%   4.4   ±   0.04   2%   88%  20   17.6   ±   0.2   2%   88%   22.8   ±   0.5   4%   86%  100   115.5   ±   2.5   4%   85%   122.3   ±   1.1   2%   78%  200   231.3   ±   1.7   1%   84%   239.3   ±   1.7   1%   80%  

12-­‐HEPE   5   4.6   ±   0.04   2%   93%   4.4   ±   0.1   3%   88%  20   18.1   ±   0.2   1%   91%   22.6   ±   0.4   3%   87%  100   122.5   ±   1.3   2%   78%   117.3   ±   1.7   3%   83%  200   231.3   ±   2.3   2%   84%   227.8   ±   1.3   1%   86%  

5-­‐HEPE   5   4.6   ±   0.05   2%   91%   4.6   ±   0.04   2%   92%  20   18.1   ±   0.2   2%   91%   23.4   ±   0.5   4%   83%  100   115.3   ±   1.3   2%   85%   119.5   ±   0.5   1%   81%  200   223.5   ±   2.0   2%   88%   233.3   ±   1.0   1%   83%  

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Compound  name    

Nominal  concentraEon  

(pg)    

Intraday  (repeatability)     Interday  (reproducibility)    

Measured  (pg)   %RSD   Accuracy   Measured  (pg)   %RSD   Accuracy  LXA4   5   5.5   ±   0.1   2%   90%   4.9   ±   0.1   4%   98%  

20   17.7   ±   0.8   8%   88%   23.5   ±   0.1   1%   82%  100   114.0   ±   2.1   4%   86%   119.0   ±   1.1   2%   81%  200   226.3   ±   2.1   2%   87%   233.5   ±   1.5   1%   83%  

LXB4   5   6.2   ±   0.1   4%   76%   5.4   ±   0.1   3%   92%  20   18.4   ±   0.6   6%   92%   22.9   ±   0.4   3%   85%  100   116.8   ±   1.7   3%   83%   114.5   ±   1.2   2%   86%  200   220.0   ±   4.5   4%   90%   231.8   ±   1.6   1%   84%  

5S,15S-­‐diHETE   5   5.1   ±   0.1   4%   98%   5.4   ±   0.1   2%   93%  20   20.3   ±   0.5   4%   98%   26.4   ±   0.2   1%   68%  100   123.3   ±   1.4   2%   77%   129.0   ±   2.0   3%   71%  200   246.5   ±   3.7   3%   77%   251.0   ±   6.1   5%   75%  

LTB4   5   5.0   ±   0.03   1%   99%   5.8   ±   0.1   2%   84%  20   22.3   ±   0.3   2%   89%   27.5   ±   0.4   3%   63%  100   125.0   ±   0.6   1%   75%   130.0   ±   1.8   3%   70%  200   231.0   ±   3.2   3%   85%   226.8   ±   2.9   3%   87%  

20-­‐OH-­‐LTB4   5   5.4   ±   0.1   4%   93%   4.9   ±   0.03   1%   98%  20   17.1   ±   0.5   6%   86%   22.6   ±   0.4   3%   87%  100   111.3   ±   2.7   5%   89%   116.0   ±   0.8   1%   84%  200   223.3   ±   1.1   1%   88%   229.0   ±   3.0   3%   86%  

20-­‐COOH-­‐LTB4   5   5.1   ±   0.4   16%   99%   5.2   ±   0.1   2%   97%  20   18.0   ±   0.9   9%   90%   21.4   ±   1.6   13%   93%  100   117.5   ±   1.3   2%   83%   114.0   ±   2.2   4%   86%  200   227.3   ±   2.3   2%   86%   253.8   ±   3.4   3%   73%  

PGD2   5   5.7   ±   0.1   2%   87%   5.2   ±   0.1   4%   96%  20   17.1   ±   0.2   2%   86%   22.8   ±   0.3   3%   86%  100   105.5   ±   2.3   4%   95%   115.5   ±   1.0   2%   85%  200   213.3   ±   3.1   3%   93%   218.3   ±   3.7   3%   91%  

PGE2   5   5.5   ±   0.1   4%   90%   4.9   ±   0.2   6%   97%  20   18.0   ±   0.5   4%   90%   22.9   ±   0.9   7%   86%  100   116.8   ±   4.0   7%   83%   113.8   ±   2.3   4%   86%  200   206.5   ±   1.2   1%   97%   209.5   ±   4.6   4%   95%  

PGF2α   5   5.5   ±   0.1   2%   90%   5.2   ±   0.1   3%   97%  20   19.2   ±   0.5   4%   96%   25.6   ±   0.4   3%   72%  100   120.3   ±   1.7   3%   80%   123.8   ±   1.1   2%   76%  200   233.3   ±   3.1   3%   83%   220.8   ±   0.9   1%   90%  

TXB2   5   4.7   ±   0.2   7%   94%   5.0   ±   0.01   0.3%   100%  20   16.8   ±   0.8   8%   84%   22.2   ±   1.3   10%   89%  100   111.2   ±   4.1   7%   89%   118.0   ±   4.5   8%   82%  200   219.0   ±   3.6   3%   91%   189.5   ±   6.9   7%   95%  

Table   8   (part   3/4):   Precision   and   accuracy   of   LM  metabololipidomics.  %RSD,   relaFve   standard  deviaFon;  %RSD  =  (SEM/mean)  x  100;  mean  ±  SEM;  n  =  4    

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Compound  name    

Nominal  concentraEon  

(pg)    

Intraday  (repeatability)     Interday  (reproducibility)    

Measured  (pg)   %RSD   Accuracy   Measured  (pg)   %RSD   Accuracy  15-­‐HETE   5   4.1   ±   0.1   2%   82%   4.2   ±   0.05   2%   84%  

20   16.6   ±   0.2   2%   83%   21.8   ±   0.4   3%   91%  100   109.3   ±   2.6   5%   91%   110.8   ±   1.3   2%   89%  200   212.8   ±   2.3   2%   94%   219.0   ±   0.8   1%   91%  

12-­‐HETE   5   4.5   ±   0.04   2%   89%   4.8   ±   0.04   2%   95%  20   17.7   ±   0.3   2%   89%   23.1   ±   0.6   4%   85%  100   113.8   ±   1.8   3%   86%   117.0   ±   1.1   2%   83%  200   216.5   ±   1.8   2%   92%   220.0   ±   1.7   2%   90%  

5-­‐HETE   5   4.9   ±   0.05   2%   97%   5.0   ±   0.1   4%   100%  20   20.3   ±   0.3   3%   98%   25.7   ±   0.3   2%   72%  100   125.0   ±   3.0   5%   75%   127.8   ±   1.4   2%   72%  200   232.5   ±   1.4   1%   84%   239.5   ±   4.7   4%   80%  

Table   8   (part   4/4):   Precision   and   accuracy   of   LM   metabololipidomics.   %RSD,   relaFve   standard  deviaFon;  %RSD  =  (SEM/mean)  x  100;  mean  ±  SEM;  n  =  4    

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

Day-­‐0   Day-­‐1   Day-­‐2   Day-­‐3   Day-­‐4   Day-­‐5   2-­‐weeks   4-­‐weeks  DHA  bioacEve  metabolome   Δ  change  (%)  RvD1   49.5±1.3  

with     -­‐1.0   -­‐0.2   +3.2   -­‐3.2   -­‐1.1  without     +0.8   -­‐2.0   +2.4   -­‐13.2   -­‐15.5   -­‐33.4   -­‐56.8  

RvD2   13.4±0.8  with     -­‐1.3   +1.1   +6.4   +2.3   +1.1  

without     -­‐9.2   +2.5   +2.2   -­‐1.2   -­‐19.2   -­‐39.5   -­‐59.0  RvD3   68.5±7.5  

with     -­‐3.1   +8.0   +6.6   -­‐4.4   +6.0  without     -­‐6.8   -­‐8.5   -­‐3.3   -­‐11.3   -­‐12.6   -­‐18.9   -­‐25.4  

RvD5   24.9±2.2  with     +6.5   -­‐10.5   -­‐18.0   -­‐8.4   -­‐16.8  

without     -­‐16.4   -­‐14.8   -­‐15.1   -­‐20.2   -­‐17.0   -­‐38.7   -­‐44.0  RvD6   21.6±2.0  

with     +1.7   +2.2   -­‐1.1   +0.4   -­‐11.8  without     +4.6   -­‐9.8   -­‐12.5   -­‐17.2   -­‐14.3   -­‐19.5   -­‐85.3  

PD1   6.1±0.1  with     -­‐3.0   +5.5   -­‐8.3   -­‐11.9   -­‐10.4  

without     +6.7   +1.7   -­‐18.3   -­‐26.8   -­‐23.7   -­‐33.0   -­‐36.7  MaR1   9.0±0.8  

with     +2.3   +0.9   -­‐8.0   -­‐6.5   -­‐17.8  without     -­‐6.5   -­‐2.5   -­‐2.6   -­‐15.7   -­‐24.7   -­‐67.9   -­‐73.1  

EPA  bioacEve  metabolome  RvE1   13.1±0.9  

with     -­‐3.3   -­‐9.0   -­‐13.9   -­‐9.4   -­‐13.1  without     +7.6   -­‐4.2   -­‐22.0   -­‐23.7   -­‐24.6   -­‐50.7   -­‐57.1  

RvE3   686.3±51.0  with     -­‐6.4   -­‐7.6   -­‐5.1   -­‐7.2   -­‐4.4  

without     -­‐1.3   -­‐5.2   -­‐4.5   -­‐3.5   -­‐18.7   -­‐40.9   -­‐42.2  AA  bioacEve  metabolome  LXA4   11.2±1.0  

with     1.8   +0.5   -­‐8.6   -­‐8.3   -­‐5.9  without     4.4   -­‐3.8   -­‐5.2   -­‐5.7   -­‐3.8   -­‐14.4   -­‐39.9  

LXB4   117.6±2.6  with     -­‐1.7   -­‐3.6   -­‐1.9   +5.2   -­‐5.5  

without     -­‐1.3   -­‐5.8   -­‐3.6   -­‐5.8   -­‐11.3   -­‐17.7   -­‐57.1  PGD2   55.1±1.9  

with     +9.8   -­‐6.8   +3.3   +3.7   -­‐15.5  without     +7.6   -­‐2.8   +5.8   +2.1   -­‐16.9   -­‐10.9   -­‐26.7  

PGE2   199.2±10.2  with     +3.7   -­‐1.2   +0.1   -­‐11.8   -­‐15.6  

without     -­‐6.2   -­‐12.2   -­‐14.3   -­‐20.8   -­‐15.3   -­‐11.9   -­‐29.8  PGF2a   143.3±2.5  

with     -­‐0.4   -­‐0.2   +1.2   +8.9   -­‐13.6  without     +8.0   +1.1   +1.6   +4.8   -­‐9.0   -­‐15.6   -­‐34.1  

TxB2   6067.0±128.4  with     -­‐5.2   -­‐7.8   +7.4   -­‐5.5   -­‐12.5  

without     +9.2   -­‐3.2   +7.3   -­‐16.6   -­‐19.2   -­‐17.8   -­‐34.2  

Table   9:   Human   serum   (250µl)   was   stored   under   -­‐30°C   with   or   without   1ml  methanol.     On   the  designated   day   (Day-­‐0   to   4-­‐weeks),   LC-­‐MS-­‐MS   based   LM   metabololipidomics   were   carried   out.    Results  are  expressed  as  pg/ml  serum;  mean  ±  SEM  of  d  =  3  determinaFons  and  Δ  change  (%)  from  Day-­‐0.    

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MulEple  ReacEon  Monitoring  TransiEons    

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Table  1:  MRM  transiFon  for  LC-­‐MS-­‐MS  based  metabololipidomics  of  AA,  EPA  and  DHA  derived  lipid  mediators.  

Table  2:  MRM  transiFon  for  LC-­‐MS-­‐MS  based  metabololipidomics  of  AA  and  DHA  derived  aspirin-­‐triggered  lipid  mediators.  

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Compound   Q1   Q3   Compound   Q1   Q3  

AA   303.3   259.1   15-­‐HEPE   317.2   219.1  PGD2   351.3   233.2   18-­‐HEPE   317.2   259.1  PGE2     351.3   175.1  PGF2α   353.3   193.1   DHA   327.3   283.1  TXB2   369.3   169.1   RvD1     375.2   215.2  LTB4   335.3   195.2   RvD2     375.2   141.2  LXA4     351.2   235.1   RvD3     375.2   147.1  LXB4   351.2   221.1   RvD5   359.2   199.1  5,15-­‐diHETE   335.2   115.2   RvD6   359.2   159.1  5-­‐HETE   319.2   115.1   MaR1   359.2   250.1  12-­‐HETE   319.2   179.1   4,14-­‐diHDHA     359.2   221.1  15-­‐HETE   319.2   219.1   PD1   359.2   153.1  

4-­‐HDHA   343.2   101.1  EPA   301.3   257.1   7-­‐HDHA   343.2   141.1  LXA5   349.2   215.1   14-­‐HDHA   343.2   205.1  LXB5   349.2   221.2   17-­‐HDHA   343.2   245.1  5,15-­‐diHEPE   333.2   235.2  RvE1   349.2   195.1   d4-­‐PGE2   355.3   193.2  RvE2     333.3   253.2   d5-­‐LXA4   356.3   115.2  RvE3   333.3   201.1   d4-­‐LTB4   339.3   197.2  5-­‐HEPE   317.2   115.1   d8-­‐5S-­‐HETE   327.3   116.1  12-­‐HEPE   317.2   179.1   d5-­‐RvD2     380.2     141.2    

Compound   Q1   Q3   Compound   Q1   Q3  

AT-­‐LXA4   351.2   235.1   AT-­‐RvD3   375.2   147.1  AT-­‐LXB4   351.2   221.1   AT-­‐RvD5   359.2   199.1  

AT-­‐RvD6   359.2   159.1    AT-­‐RvD1   375.2   215.2  AT-­‐RvD2   375.2   141.2   AT-­‐PD1   359.2   153.1  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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AddiEonal  references:    

Specific   lipid   mediator   signatures   of   human   phagocytes:   microparFcles   sFmulate  macrophage  efferocytosis  and  pro-­‐resolving  mediators.  Dalli  J,  Serhan  CN.  Blood.  2012  120(15)  

Metabolomics-­‐lipidomics  of  eicosanoids  and  docosanoids  generated  by  phagocytes.  Yang  R,  Chiang  N,  Oh  SF,  Serhan  CN.  Curr  Protoc  Immunol.  2011  Chapter  14:Unit  14.26.    

Table  3:  MRM  transiFon  for  LC-­‐MS-­‐MS  based  metabololipidomics  of  further  metabolites  of  AA,  EPA  and  DHA  derived  lipid  mediators.  

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Compound   Q1   Q3   Compound   Q1   Q3  

20-­‐OH-­‐LTB4 351.2 195.1 Dihydro-­‐RvD1 377.2 279.1 20-­‐COOH-­‐LTB4 365.2 195.1 7-­‐oxo-­‐RvD2 373.2 260.1 15-­‐oxo-­‐LXA4   349.2 233.1 16-­‐oxo-­‐RvD2 373.2 260.1 13,14-­‐dihydro-­‐LXA4   353.2 253.1 22-­‐OH-­‐RvD2 391.2 249.1 5-­‐oxo-­‐LXB4 349.2 219.1 Dihydro-­‐RvD2 377.2 279.1

14-­‐oxo-­‐MaR1 357.2 221.1 18-­‐oxo-­‐RvE1 347.2 213.1 7-­‐oxo-­‐MaR1 357.2 219.1 19-­‐OH-­‐RvE1 365.2 205.1 22-­‐OH-­‐MaR1 375.2 177.1 20-­‐OH-­‐RvE1 365.2 291.1 22-­‐COOH-­‐MaR1 389.2 177.1 20-­‐COOH-­‐RvE1 379.2 237.1 Dihydro-­‐MaR1 361.2 223.1 Dihydro-­‐RvE1 351.2 225.1 22-­‐OH-­‐PD1 375.2 153.1

22-­‐COOH-­‐PD1 389.2 153.1 8-­‐oxo-­‐RvD1 373.2 231.1 Dihydro-­‐PD1 361.2 263.1 17-­‐oxo-­‐RvD1 373.2 231.1

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Lipid  Mediator  BiosyntheEc  Pathways  

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Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Key  eicosanoids  that  play  pivotal  roles  in  iniEaEng  inflammaEon  and  its  resoluEon.  

AnF-­‐Inflammatory   and   Pro-­‐Resolving   Lipid  Mediators.   Charles   N.   Serhan,   Stephanie   Yacoubian   and   Rong  Yang  Annu  Rev  Pathol.  2008  3:  279–312.  PMCID:  PMC2739396  

BiosyntheEc  scheme  for  the  Prostaglandins,  Leukotrienes  and  Lipoxins  

41/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Resolvins  and  ProtecFns  in  InflammaFon-­‐ResoluFon  Charles  N.  Serhan,  Nicos  A.  Petasis  Chem  Rev.  2011  12  111(10):  5922–5943.  PMCID:  PMC3192290  

E-­‐series  resolvin  biosynthesis  and  metabolic  inacEvaEon.  

BiosyntheEc  scheme  for  the  E-­‐series  Resolvins  

42/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Resolvins  and  ProtecFns  in  InflammaFon-­‐ResoluFon  Charles  N.  Serhan,  Nicos  A.  Petasis  Chem  Rev.  2011  12  111(10):  5922–5943.  PMCID:  PMC3192290  

BiosyntheEc  scheme  for  the  D-­‐series  Resolvins  

Pathways  and  enzymes  in  the  biosynthesis  of  D-­‐series  resolvins.  

43/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Resolvins  and  ProtecFns  in  InflammaFon-­‐ResoluFon  Charles  N.  Serhan,  Nicos  A.  Petasis  Chem  Rev.  2011  12  111(10):  5922–5943.  PMCID:  PMC3192290  

BiosyntheEc  scheme  for  the  aspirin  triggered  D-­‐series  Resolvins  

Pathways  and  enzymes  involved  in  the  biosynthesis  of  aspirin-­‐triggered  D-­‐series  resolvins.  

44/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Resolvins  and  ProtecFns  in  InflammaFon-­‐ResoluFon  Charles  N.  Serhan,  Nicos  A.  Petasis  Chem  Rev.  2011  12  111(10):  5922–5943.  PMCID:  PMC3192290  

Biosynthetic scheme for the Protectins

Pathways  and  enzymes  involved  in  the  biosynthesis  of  protecEn  (PD1/NPD1)  and  10S,17S-­‐diHDHA.  

45/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Maresins:  novel  macrophage  mediators  with  potent  anFinflammatory  and  proresolving  acFons.  Serhan  CN,  Yang  R,  Mar6nod  K,  Kasuga  K,  Pillai  PS,  Porter  TF,  Oh  SF,  Spite  M.   J  Exp  Med.  2009  206(1):15-­‐23.  PMCID:  PMC2626672  

BiosyntheEc  scheme  proposed  for  MaR1  and  related  products.  

Biosynthetic scheme for the Maresins

46/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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LC-­‐MS-­‐MS  Spectra  

47/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Arachidonic  Acid  Metabolome  

Prostaglandins  &  Thromboxane  

48/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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PGD2  

10.6  

351=M-­‐H  333=M-­‐H-­‐H2O  315=M-­‐H-­‐2H2O  289=M-­‐H-­‐H2O-­‐CO2  271=M-­‐H-­‐2H2O-­‐CO2  235=279-­‐CO2  233=251-­‐H2O  217=279-­‐H2O-­‐CO2  189=251-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

271  

189  

315  

233  

333  

351  289  217   251  235  

100   140   180   220   260   300   340   380  m/z,  Da  

+H  251   -­‐H  

279  

HO

O

COO-

OH

49/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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PGE2  

10.5  

351=M-­‐H  333=M-­‐H-­‐H2O  315=M-­‐H-­‐2H2O  289=M-­‐H-­‐H2O-­‐CO2  271=M-­‐H-­‐2H2O-­‐CO2  243=279-­‐2H2O  235=279-­‐CO2  233=251-­‐H2O  217=279-­‐H2O-­‐CO2  207=251-­‐CO2  189=251-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

271  

315   333  

189  

233   289  217   351  243  

235  

207   279  

100   140   180   220   260   300   340   380  m/z,  Da  

+H  251   -­‐H  

279  

O

HO

COO-

OH

50/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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PGF2α  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

10.9  

353=M-­‐H  335=M-­‐H-­‐H2O  317=M-­‐H-­‐2H2O  299=M-­‐H-­‐3H2O  291=309-­‐H2O  273=309-­‐2H2O  263=281-­‐H2O  235=253-­‐H2O  219=281-­‐H2O-­‐CO2  217=253-­‐2H2O  209=253-­‐CO2  193=253-­‐H-­‐CH3-­‐CO2  191=253-­‐H2O-­‐CO2  173=253-­‐2H2O-­‐CO2  

253  209   281  

353  

309  

335  291  

317  273   299  191   219   235  173  

217  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

HO

HO

COO-

OH

253  281  

+H  

-­‐H  

193  

309  

51/104  

263  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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©  2014  Serhan  et  al.  

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TxB2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

10.1  

369=M-­‐H  333=M-­‐H-­‐2H2O  325=M-­‐H-­‐CO2  315=M-­‐H-­‐3H2O  307=M-­‐H-­‐H2O-­‐CO2  289=M-­‐H-­‐2H2O-­‐CO2  279=297-­‐H2O  233=269-­‐2H2O  195=213-­‐H2O  189=269-­‐2H2O-­‐CO2  177=213-­‐2H2O  151=169-­‐H2O  133=169-­‐2H2O  125=169-­‐CO2  

169  

195  

177  

125   289  

151  369  307  

315   333  279   325  189  133   233  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

269  297  

+H  

-­‐H  

213  

169  

O

OH

HO

COO-

OH

52/104  

297  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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Arachidonic  Acid  Metabolome  

Leukotrienes  

53/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

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COO-

OHOH

LTB4  

13.3  

335=M-­‐H  317=M-­‐H-­‐H2O  299=M-­‐H-­‐2H2O  291=M-­‐H-­‐CO2  273=M-­‐H-­‐H2O-­‐CO2  255=M-­‐H-­‐2H2O-­‐CO2  205=223-­‐H2O  179=223-­‐CO2  177=195-­‐H2O  161=223-­‐H2O-­‐CO2  151=195-­‐CO2  133=195-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

335  

195  

317  

151  273  129  

111   177   299  255  205  

133  291  115  

179  

219  161  

100   140   180   220   260   300   340   380  m/z,  Da  

115  

219  -­‐H  

223  

111  -­‐H  

+H  195  

270  

261   281  λmax

MeOH  =  270  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

270  230   250   290  210   330  310  

54/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

129  

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20-­‐OH-­‐LTB4  

8.8  

351=M-­‐H  333=M-­‐H-­‐H2O  315=M-­‐H-­‐2H2O  289=M-­‐H-­‐H2O-­‐CO2  271=M-­‐H-­‐2H2O-­‐CO2  179=223-­‐CO2  177=195-­‐H2O  151=195-­‐CO2  133=195-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

351  

195  

333  

151   315  289  179  177  

271  133  115  

100   140   180   220   260   300   340   380  m/z,  Da  

COO-

OHOH

OH

270  

261  281  

λmaxMeOH  =  270  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

270  230   250   290  210   330  310  

115  195  

223  -­‐H  

+H  

-­‐H  

55/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

129  

129  

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20-­‐COOH-­‐LTB4  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

7.75  

365=M-­‐H  347=M-­‐H-­‐H2O  329=M-­‐H-­‐2H2O  321=M-­‐H-­‐CO2  303=M-­‐H-­‐H2O-­‐CO2  285=M-­‐H-­‐2H2O-­‐CO2  205=223-­‐H2O  177=195-­‐H2O  161=223-­‐H2O-­‐CO2  151=195-­‐CO2  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

365  

347  

151  

329  303  

285  141   161   205   249  177   321  115  

195  

100   140   180   220   260   300   340   380  m/z,  Da  

270  

261  281  

λmaxMeOH  =  270  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

270  230   250   290  210   330  310  

115  195  

223  

141   -­‐H  

+H  

-­‐H   249  

56/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

©  2014  Serhan  et  al.  

129  

129  

COO-

COOH

OH OH

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Arachidonic  Acid  Metabolome  

Lipoxins  

57/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

Lipid  Mediator  Metabololipidomics  LC-­‐MS-­‐MS  Spectra  Book  2014  

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LXA4  

11.1  

351=M-­‐H  333=M-­‐H-­‐H2O  315=M-­‐H-­‐2H2O  307=M-­‐H-­‐CO2  289=M-­‐H-­‐H2O-­‐CO2  271=M-­‐H-­‐2H2O-­‐CO2  261=279-­‐H2O  233=251-­‐H2O  217=235-­‐H2O  215=251-­‐2H2O  207=251-­‐CO2  199=235-­‐2H2O  189=251-­‐H2O-­‐CO2  127=145-­‐H2O  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

115   351  

217  

235  

289  189  271  

307   333  315  251  207  127   145   233   261  215  199  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

115  

+H  

235  

-­‐H  -­‐H  145  

251  

279  -­‐H  

COO-

HO OH

OH

301  

288  

315  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

58/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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LXB4  

10.5  

351=M-­‐H  333=M-­‐H-­‐H2O  315=M-­‐H-­‐2H2O  307=M-­‐H-­‐CO2  297=M-­‐H-­‐3H2O  289=M-­‐H-­‐H2O-­‐CO2  271=M-­‐H-­‐2H2O-­‐CO2  261=279-­‐H2O  243=279-­‐2H2O  233=251-­‐H2O  217=235-­‐H2O  215=251-­‐2H2O  207=251-­‐CO2  203=221-­‐H2O  189=251-­‐H2O-­‐CO2  177=221-­‐CO2  159=221-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

351  

221  

315  

233  

333  

189   251  207  271  203  177  

159   289  297  215  

243   307  261  217  115  

100   140   180   220   260   300   340   380  m/z,  Da  

279  251  

-­‐H  221  

115  

235  

+H  

-­‐H  

+H  

COO-

OH

HO OH

301  

288  

314  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

59/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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13.0  

5S,15S-­‐diHETE  

335=M-­‐H  317=M-­‐H-­‐H2O  299=M-­‐H-­‐2H2O  291=M-­‐H-­‐CO2  273=M-­‐H-­‐H2O-­‐CO2  255=M-­‐H-­‐2H2O-­‐CO2  227=263-­‐2H2O  217=235-­‐H2O  201=219-­‐H2O  191=235-­‐CO2  173=235-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

255  

317  

335  

173  

201  

115  

273  235  

299  217  

191  291  

227  219  

100   140   180   220   260   300   340   380  m/z,  Da  

COO-

OH

OH

219  

235  

115  

-­‐H  +H  

263  

-­‐H  

244  

λmaxMeOH  =  244  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

60/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Arachidonic  Acid  Metabolome  

MonoHydroxyETE  Products  

61/104  

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5-­‐HETE  

16.4  

319=M-­‐H  301=M-­‐H-­‐H2O  275=M-­‐H-­‐CO2  257=M-­‐H-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

257  

319  

301  

115  

203  

275  

100   140   180   220   260   300   340   380  m/z,  Da  

115  232  

-­‐H  

203  

-­‐H  

COO-

OH

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

232  

62/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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12-­‐HETE  

15.9  

319=M-­‐H  301=M-­‐H-­‐H2O  275=M-­‐H-­‐CO2  257=M-­‐H-­‐H2O-­‐CO2  163=207-­‐CO2  145=207-­‐H2O-­‐CO2  135=179-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

319  

179  257  

301  

135  

163  275  

145  

207  

100   140   180   220   260   300   340   380  m/z,  Da  

-­‐H  207  

+H  

179  

COO-

OH

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

63/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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15-­‐HETE  

15.6  

319=M-­‐H  301=M-­‐H-­‐H2O  275=M-­‐H-­‐CO2  257=M-­‐H-­‐H2O-­‐CO2  203=247-­‐CO2  175=219-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

319  

301  

257  

175  

219  

203  275  

247  

100   140   180   220   260   300   340   380  m/z,  Da  

219  +H  

247  

-­‐H  

COO-

OH

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

64/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Eicosapentaenoic  Acid  Metabolome  

Lipoxins  

65/104  

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LXA5  

10.2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

349=M-­‐H  331=M-­‐H-­‐H2O  313=M-­‐H-­‐2H2O  305=M-­‐H-­‐CO2  287=M-­‐H-­‐H2O-­‐CO2  269=M-­‐H-­‐2H2O-­‐CO2  217=279-­‐H2O-­‐CO2  215=233-­‐H2O  207=251-­‐CO2  189=251-­‐H2O-­‐CO2  171=251-­‐2H2O-­‐CO2  

100   140   180   220   260   300   340   380  m/z,  Da  

301  

288  

315  λmax

MeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

349  

COO-

OH

HO OH

115  

+H  

233  -­‐H  -­‐H  

145  

251  279  

-­‐H  

215   233  

115  

269  287  

305  313  

331  145   251  

189  

207  217  171  

66/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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-­‐H  

5S,15S-­‐diHEPE  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

333  

100   140   180   220   260   300   340   380  m/z,  Da  

COO-

OH

OH

246  115  217  

-­‐H  

235  

+H   -­‐H  263  

246  

115  

217  

235  

315  

297  

289  

271  

253  199  

333=M-­‐H  315=M-­‐H-­‐H2O  297=M-­‐H-­‐2H2O  289=M-­‐H-­‐CO2  271=M-­‐H-­‐H2O-­‐CO2  253=M-­‐H-­‐2H2O-­‐CO2  245=263-­‐H2O  219=263-­‐CO2  201=263-­‐H2O-­‐CO2  199=217-­‐H2O  191=235-­‐CO2  173=235-­‐H2O-­‐CO2  

191  

173  

219  

201  

245  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

244  

λmaxMeOH  =  244  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

12.2  

67/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Eicosapentaenoic  Acid  Metabolome  

E-­‐Series  Resolvins  

68/104  

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RvE1  

349=M-­‐H  331=M-­‐H-­‐H2O  313=M-­‐H-­‐2H2O  305=M-­‐H-­‐CO2  295=M-­‐H-­‐3H2O  287=M-­‐H-­‐H2O-­‐CO2  273=291-­‐H2O  269=M-­‐H-­‐2H2O-­‐CO2  255=291-­‐2H2O  229=291-­‐H2O-­‐CO2  205=223-­‐H2O  187=223-­‐2H2O  179=223-­‐CO2  177=195-­‐H2O  161=223-­‐H2O-­‐CO2  151=195-­‐CO2  133=195-­‐H2O-­‐CO2  

291  

195  

223  

115  

+H  

+H  

-­‐H  

-­‐H  

8.3  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

349  

195  

331  

161  

205  

291  313  179   287  273  

187  151   295  115   255  229  177   305  269  

100   140   180   220   260   300   340   380  m/z,  Da  

271  

262   282  λmax

MeOH  =  271  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

270  230   250   290  210   330  310  

237  

69/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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COO-

HO

OH

OH

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11.9  

RvE2  

333=M-­‐H  315=M-­‐H-­‐H2O  297=M-­‐H-­‐2H2O  289=M-­‐H-­‐CO2  271=M-­‐H-­‐H2O-­‐CO2  257=275-­‐H2O  253=M-­‐H-­‐2H2O-­‐CO2  231=275-­‐CO2  213=275-­‐H2O-­‐CO2  199=217-­‐H2O  173=217-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

333  

271  

213   253  

115  315  

199  

275  297  

257   289  231  217  173  

100   140   180   220   260   300   340   380  m/z,  Da  

115  217  -­‐H  

275  

+H  

COO-

HO

OH

243  

λmaxMeOH  =  243  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

70/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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RvE3  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

303  275  

-­‐H  245  +H  

+H  

333  

315  

297  

289  

271  

253  

245  

201  

275  

257  

231  

213  

259  

333=M-­‐H  315=M-­‐H-­‐H2O  297=M-­‐H-­‐2H2O  289=M-­‐H-­‐CO2  271=M-­‐H-­‐H2O-­‐CO2  259=303-­‐CO2  257=275-­‐H2O  253=M-­‐H-­‐2H2O-­‐CO2  231=275-­‐CO2  213=275-­‐H2O-­‐CO2  201=245-­‐CO2  

270  

260   281  λmax

MeOH  =  270  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

250   270   290   310  230   330  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

13.2  

71/104  

COO-

HO OH

Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Eicosapentaenoic  Acid  Metabolome  

MonoHydroxyEPE  Products  

72/104  

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5-­‐HEPE  

15.4  

317=M-­‐H  299=M-­‐H-­‐H2O  273=M-­‐H-­‐CO2  255=M-­‐H-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

255  

317  115  

201  299  

273  

100   140   180   220   260   300   340   380  m/z,  Da  

115  201  

-­‐H  

COO-

OH

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

73/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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12-­‐HEPE  

15.0  

317=M-­‐H  299=M-­‐H-­‐H2O  273=M-­‐H-­‐CO2  255=M-­‐H-­‐H2O-­‐CO2  189=207-­‐H2O  163=207-­‐CO2  145=207-­‐H2O-­‐CO2  135=179-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

317  

273  145  109  

179  

255  

135  

299  163  

207  

189  

100   140   180   220   260   300   340   380  m/z,  Da  

179  +H  

207  -­‐H  

COO-

OH

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

74/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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15-­‐HEPE  

14.8  

COO-

OH -­‐H  

247  219  

+H  

317=M-­‐H  299=M-­‐H-­‐H2O  273=M-­‐H-­‐CO2  255=M-­‐H-­‐H2O-­‐CO2  229=247-­‐H2O  203=247-­‐CO2  185=247-­‐H2O-­‐CO2  175=219-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

317  

255  

219  175  

299  

247  

203   273  

185  229  

100   140   180   220   260   300   340   380  m/z,  Da  

237  

λmaxMeOH  =  237  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

75/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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18-­‐HEPE  

14.7  

317=M-­‐H  299=M-­‐H-­‐H2O  273=M-­‐H-­‐CO2  255=M-­‐H-­‐H2O-­‐CO2  243=287-­‐CO2  215=259-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

317  

255  

215  

299  

259  

273  

243  

100   140   180   220   260   300   340   380  m/z,  Da  

259  

+H  

287  -­‐H  

COO-

OH

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

76/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Docosahexaenoic  Acid  Metabolome  

D-­‐Series  Resolvins  

77/104  

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RvD1  

11.1  

375=M-­‐H  357=M-­‐H-­‐H2O  339=M-­‐H-­‐2H2O  331=M-­‐H-­‐CO2  313=M-­‐H-­‐H2O-­‐CO2  295=M-­‐H-­‐2H2O-­‐CO2  261=305-­‐CO2  259=277-­‐H2O  243=305-­‐H2O-­‐CO2  241=277-­‐2H2O  215=233-­‐H2O  197=233-­‐2H2O  185=203-­‐H2O  153=171-­‐H2O  135=171-­‐2H2O  127=171-­‐CO2  123=141-­‐H2O  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

215  

375  

233  

141  

135  

277  357  171   295   331  

313  123   197   259   339  241  153  127   185   243  

113  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

COO-

HO

OH

HO

141  

233  -­‐H  

+H  277  

171  -­‐H  

113  +H  

-­‐H  

305  

203  

301  

288  

316  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

78/104  

261  

Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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COO-

HO

OH

OH

RvD2  

10.6  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

375  

128  

277  

295  

233   357  339  197  203  

313   331  185  

215  

110  321  

375=M-­‐H  357=M-­‐H-­‐H2O  339=M-­‐H-­‐2H2O  331=M-­‐H-­‐CO2  321=M-­‐H-­‐3H2O  313=M-­‐H-­‐H2O-­‐CO2  295=M-­‐H-­‐2H2O-­‐CO2  287=305-­‐H2O  259=277-­‐H2O  241=277-­‐2H2O  215=233-­‐H2O  203=247-­‐CO2  197=233-­‐2H2O  185=247-­‐H2O-­‐CO2  110=128-­‐H2O  

233  

+H  247  

277  +H  

305  

-­‐H  

-­‐H  262  

128  -­‐H  

301  

288  

315  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

287  

259  

241  

79/104  

141  -­‐H  

141  

247  

Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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RvD3  

277  +H  

195  

181  165  

209  -­‐H  

+H  

101  -­‐H  

375  

147  

137  

357  165   215  181   277   313  295  259  159   177  

339  101   191  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   120   140   160   180   200   220   240   260   280   300   320   340   360   380  m/z,  Da  

375=M-­‐H  357=M-­‐H-­‐H2O  339=M-­‐H-­‐2H2O  313=M-­‐H-­‐H2O-­‐CO2  295=M-­‐H-­‐2H2O-­‐CO2  259=277-­‐H2O  215=277-­‐H2O-­‐CO2  191=209-­‐H2O  177=195-­‐H2O  159=195-­‐2H2O  147=165-­‐H2O  137=181-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

10.8  

80/104  

220   240   260   280   300   320  200  

Rel.  Abs.  (%)    

100%  

0%  

271  

λmaxMeOH  =  271  nm  

ε  =  40,000  abs.L/mol.  

281  260  

234  

Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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OH

HO

COO-HO

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COO-

HO

HO

141  

-­‐H  289  

+H  

+H  246  

113  

261  

-­‐H  

-­‐H  

217  

RvD5  

13.0  

359=M-­‐H  341=M-­‐H-­‐H2O  323=M-­‐H-­‐2H2O  315=M-­‐H-­‐CO2  297=M-­‐H-­‐H2O-­‐CO2  279=M-­‐H-­‐2H2O-­‐CO2  245=289-­‐CO2  243=261-­‐H2O  228=246-­‐H2O  227=289-­‐H2O-­‐CO2  199=217-­‐H2O  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

199  

279   359  

141   341  297  

246   261  217  

113   228  

245  315  323  

227  

243  

100   140   180   220   260   300   340   380  m/z,  Da  

242  

λmaxMeOH  =  242  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

81/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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RvD6  

359=M-­‐H  341=M-­‐H-­‐H2O  315=M-­‐H-­‐CO2  297=M-­‐H-­‐H2O-­‐CO2  279=M-­‐H-­‐2H2O-­‐CO2  245=289-­‐CO2  243=261-­‐H2O  239=257-­‐H2O  227=289-­‐H2O-­‐CO2  217=261-­‐CO2  209=289-­‐2H2O-­‐CO2  199=261-­‐H2O-­‐CO2  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

359  

341  

315  

297  

279  

289  

261  

101  

257  

239  

243  

217  

199  

245  

227  

101  

257  

-­‐H  

+H  261  

-­‐H  289  

209  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

240  

λmaxMeOH  =  240  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

13.4  

82/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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OH

OH

-OOC

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Docosahexaenoic  Acid  Metabolome  

Maresins    

83/104  

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OHOH

COO-

MaR1  

250   113  

246  -­‐H  

221  

+H  

+H   141  -­‐H  

13.1  

359=M-­‐H  341=M-­‐H-­‐H2O  323=M-­‐H-­‐2H2O  315=M-­‐H-­‐CO2  297=M-­‐H-­‐H2O-­‐CO2  279=M-­‐H-­‐2H2O-­‐CO2  232=250-­‐H2O  228=246-­‐H2O  203=221-­‐H2O  177=221-­‐CO2  159=221-­‐H2O-­‐CO2  123=141-­‐H2O  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

359  

177  

250  297  

123  341  

228  113   246  221   315  232   279  

141   323  

203  159  

100   140   180   220   260   300   340   380  m/z,  Da  

270  

261  281  

λmaxMeOH  =  270  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

270  230   250   290  210   330  310  

84/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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13.6  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

244  

λmaxMeOH  =  244  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

4S,14S-­‐diHDHA  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

359  

341  

100   140   180   220   260   300   340   380  m/z,  Da  

297  

279  

101  

221  

138  109   323  315  

239  

213  203  

187  

159  

177  

359=M-­‐H  341=M-­‐H-­‐H2O  323=M-­‐H-­‐2H2O  315=M-­‐H-­‐CO2  297=M-­‐H-­‐H2O-­‐CO2  279=M-­‐H-­‐2H2O-­‐CO2  239=257-­‐H2O  231=249-­‐H2O  213=249-­‐2H2O  203=221-­‐H2O  187=249-­‐H2O-­‐CO2  177=221-­‐CO2  159=221-­‐H2O-­‐CO2  

231  

COO-

OH

OH

249  -­‐H  

221  +H  

101  

-­‐H  

257  

-­‐H  138  

109  

85/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Docosahexaenoic  Acid  Metabolome  

ProtecEns  

86/104  

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PD1  

13.0  

COO-

OH

OH

153  

206  -­‐H  

+H  

-­‐H  

+H  

177   181  

261  

359=M-­‐H  341=M-­‐H-­‐H2O  323=M-­‐H-­‐2H2O  315=M-­‐H-­‐CO2  297=M-­‐H-­‐H2O-­‐CO2  279=M-­‐H-­‐2H2O-­‐CO2  243=261-­‐H2O  217=261-­‐CO2  199=261-­‐H2O-­‐CO2  188=206-­‐H2O  159=177-­‐H2O  137=181-­‐CO2  119=181-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

153  

359  

137  

206  

297  188  

341  261  217  

159   323  315  

199  119  177  

181   279  243  

100   140   180   220   260   300   340   380  m/z,  Da  

270  

261   281  λmax

MeOH  =  270  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

250   270   290   310  230   330  

87/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Docosahexaenoic  Acid  Metabolome  

MonoHydroxyDHA  Products    

88/104  

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4-­‐HDHA  

16.7  

343=M-­‐H  325=M-­‐H-­‐H2O  299=M-­‐H-­‐CO2  281=M-­‐H-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

343  

281  

101  

299  

325  

241  

100   140   180   220   260   300   340   380  m/z,  Da  

101  241  -­‐H  

COO-

OH

235  

λmaxMeOH  =  235  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

89/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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7-­‐HDHA  

16.1  

343=M-­‐H  325=M-­‐H-­‐H2O  299=M-­‐H-­‐CO2  281=M-­‐H-­‐H2O-­‐CO2  123=141-­‐H2O  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

281  

343  

201  

141  

325  

299  113  

123   230  

100   140   180   220   260   300   340   380  m/z,  Da  

141  201    

113  113  

230  -­‐H  

+H  

-­‐H  

COO-

OH

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

90/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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14-­‐HDHA  

15.9  

343=M-­‐H  325=M-­‐H-­‐H2O  299=M-­‐H-­‐CO2  281=M-­‐H-­‐H2O-­‐CO2  215=233-­‐H2O  189=233-­‐CO2  161=205-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

343  

281  

161  

325  205  

299  

233  

189  

215  

100   140   180   220   260   300   340   380  m/z,  Da  

233  -­‐H  

205  +H  

COO-

OH

237  

λmaxMeOH  =  237  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

91/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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17-­‐HDHA  

15.7  

343=M-­‐H  325=M-­‐H-­‐H2O  299=M-­‐H-­‐CO2  281=M-­‐H-­‐H2O-­‐CO2  255=273-­‐H2O  229=273-­‐CO2  211=273-­‐H2O-­‐CO2  201=245-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

343  

255  211  

281  

201  

325  245  

299  

229   273  

100   140   180   220   260   300   340   380  m/z,  Da  

-­‐H  273  

+H  245  

COO-

OH

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

92/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Aspirin-­‐Triggered    Special  Pro-­‐resolving  Mediators  

93/104  

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AT-­‐LXA4  

11.3  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

351  

115  

217  

235  

189   289  307  

271   333  315  

233  

127  

251  199  145  

171  279  215  

207  243   261  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

351=M-­‐H  333=M-­‐H-­‐H2O  315=M-­‐H-­‐2H2O  307=M-­‐H-­‐CO2  289=M-­‐H-­‐H2O-­‐CO2  271=M-­‐H-­‐2H2O-­‐CO2  261=279-­‐H2O  243=279-­‐2H2O  233=251-­‐H2O  217=235-­‐H2O  215=251-­‐2H2O  207=251-­‐CO2  199=235-­‐2H2O  189=251-­‐H2O-­‐CO2  171=251-­‐2H2O-­‐CO2  127=145-­‐H2O  

100   140   180   220   260   300   340   380  m/z,  Da  

COO-

HO OH

OH

115  

+H  

235  

-­‐H  -­‐H  145  

251  

279  -­‐H  

301  

288  

315  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

94/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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AT-­‐LXB4  

11.1  

351=M-­‐H  333=M-­‐H-­‐H2O  315=M-­‐H-­‐2H2O  307=M-­‐H-­‐CO2  297=M-­‐H-­‐3H2O  289=M-­‐H-­‐H2O-­‐CO2  271=M-­‐H-­‐2H2O-­‐CO2  261=279-­‐H2O  243=279-­‐2H2O  233=251-­‐H2O  217=235-­‐H2O  215=251-­‐2H2O  207=251-­‐CO2  203=221-­‐H2O  189=251-­‐H2O-­‐CO2  177=221-­‐CO2  159=221-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

351  

221  

315  

233  

333  

189   251  207  271  203  177  

159   289  297  215  

243   307  261  217  115  

100   140   180   220   260   300   340   380  m/z,  Da  

301  

288  

314  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

95/104  Wavelength,  nm  

279  251  

-­‐H  221  

115  

235  

+H  

-­‐H  

+H  

COO-

OH

HO OH

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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AT-­‐RvD1  

11.2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

375=M-­‐H  357=M-­‐H-­‐H2O  339=M-­‐H-­‐2H2O  331=M-­‐H-­‐CO2  313=M-­‐H-­‐H2O-­‐CO2  295=M-­‐H-­‐2H2O-­‐CO2  261=305-­‐CO2  259=277-­‐H2O  243=305-­‐H2O-­‐CO2  241=277-­‐2H2O  215=233-­‐H2O  197=233-­‐2H2O  185=203-­‐H2O  153=171-­‐H2O  135=171-­‐2H2O  127=171-­‐CO2  123=141-­‐H2O  

215  

375  

233  

141  

135  

277  

185  127  357  171   295   331  

113   313  123  197  

153  259   339  241  

243  0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

COO-

HO

OH

HO

141  

233  -­‐H  

+H  277  

171  -­‐H  

113  +H  

-­‐H  

305  

203  

301  

288  316  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

96/104  Wavelength,  nm  

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AT-­‐RvD3  

375=M-­‐H  357=M-­‐H-­‐H2O  339=M-­‐H-­‐2H2O  313=M-­‐H-­‐H2O-­‐CO2  295=M-­‐H-­‐2H2O-­‐CO2  259=277-­‐H2O  215=277-­‐H2O-­‐CO2  191=209-­‐H2O  177=195-­‐H2O  159=195-­‐2H2O  147=165-­‐H2O  137=181-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

10.5  

97/104  

220   240   260   280   300   320  200  

Rel.  Abs.  (%)    

100%  

0%  

271  

λmaxMeOH  =  271  nm  

ε  =  40,000  abs.L/mol.  

281  260  

234  

375  

147  

137  

357  165   215  181   277   313  295  259  159   177  

339  101   191  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   120   140   160   180   200   220   240   260   280   300   320   340   360   380  m/z,  Da  

Wavelength,  nm  

277  +H  

195  

181  165  

209  -­‐H  

+H  

101  -­‐H  

HO

COO-

OH

HO

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COO-

OH

OH

AT-­‐PD1  

12.4  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

270  

261   281  λmax

MeOH  =  270  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

250   270   290   310  230   330  

359=M-­‐H  341=M-­‐H-­‐H2O  323=M-­‐H-­‐2H2O  315=M-­‐H-­‐CO2  297=M-­‐H-­‐H2O-­‐CO2  279=M-­‐H-­‐2H2O-­‐CO2  243=261-­‐H2O  217=261-­‐CO2  199=261-­‐H2O-­‐CO2  188=206-­‐H2O  159=177-­‐H2O  137=181-­‐CO2  119=181-­‐H2O-­‐CO2  109=153-­‐CO2  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

153  

359  

137  

206  

297  188  

341  261  217  

159   323  315  

199  119  177  

181   279  243  

100   140   180   220   260   300   340   380  m/z,  Da  

98/104  Wavelength,  nm  

153  

206  -­‐H  

+H  

-­‐H  

+H  

177   181  

261  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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Deuterium  Labeled    Internal  Standards  

99/104  

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d4-­‐PGE2  

+H  255   -­‐H  

283  

O

HO

COO-

OH

D D

D D

275  

319   337  

193  

239  211   355  293  

237  

283  

355=M-­‐H  337=M-­‐H-­‐H2O  319=M-­‐H-­‐2H2O  293=M-­‐H-­‐H2O-­‐CO2  275=M-­‐H-­‐2H2O-­‐CO2  239=283-­‐CO2  237=255-­‐H2O  211=255-­‐CO2  193=255-­‐H2O-­‐CO2  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

10.4  

Rel.  Int.  (%

)  

100/104  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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COO-

HO OH

OH

D D

D

D

D

d5-­‐LXA4  

10.1  

356=M-­‐H  320=M-­‐H-­‐2H2O  312=M-­‐H-­‐CO2  294=M-­‐H-­‐H2O-­‐CO2  276=M-­‐H-­‐2H2O-­‐CO2  233=251-­‐H2O  222=240-­‐H2O  189=251-­‐H2O-­‐CO2  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

356  

115  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

115  

+H  

240  

-­‐H  

251  

301  

288  

315  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

320  312  

294  

276  251  

240  

233  

222  

189  

101/104  Wavelength,  nm  

-­‐H  145  

145  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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d4-­‐LTB4  

COO-

OHOH

D

D

D D

142  

197  113  

225  -­‐H  

+H  223  

115  -­‐H  -­‐H  

339=M-­‐H  321=M-­‐H-­‐H2O  303=M-­‐H-­‐2H2O  295=M-­‐H-­‐CO2  277=M-­‐H-­‐H2O-­‐CO2  259=M-­‐H-­‐2H2O-­‐CO2  207=225-­‐H2O  205=223-­‐H2O  181=225-­‐CO2  179=197-­‐H2O  163=225-­‐H2O-­‐CO2  153=197-­‐CO2  135=197-­‐H2O-­‐CO2  124=142-­‐H2O  

339  

197  

321  

153  277  207  181  

115   303  259  163  124  135   295  142  

113   205  179  0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

270  

261   281  λmax

MeOH  =  270  nm  

ε  =  40,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

270  230   250   290  210   330  310  0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

13.1  

Rel.  Int.  (%

)  

102/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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d8-­‐5S-­‐HETE  

COO-

OH

D D D D

D D D D

116  210  

-­‐H  327  

309  116   265  

210  

283  

327=M-­‐H  309=M-­‐H-­‐H2O  283=M-­‐H-­‐CO2  265=M-­‐H-­‐H2O-­‐CO2  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

236  

λmaxMeOH  =  236  nm  

ε  =  25,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

220   230   240   250   270  210   280   290  260  

16.2  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

Rel.  Int.  (%

)  

103/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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d5-­‐RvD2  

10.6  

Rel.  Int.  (%

)  

0%  

50%  

100%  

2   4   6   8   10   12   14   16   18   20   22  

Time,  min  

0  

380  

0%  

10%  

20%  

30%  

40%  

50%  

60%  

70%  

80%  

90%  

100%  

Rel.  Int.  (%

)  

100   140   180   220   260   300   340   380  m/z,  Da  

301  

288  

315  

λmaxMeOH  =  301  nm  

ε  =  50,000  abs.L/mol.  

Rel.  Abs.  (%)  

0%  

50%  

100%  

260   280   300   320   340  240   360   380  

362  

104/104  Wavelength,  nm  

Prof.  Charles  N.  SERHAN  Laboratory    Brigham  &  Women’s  Hospital  Center  for  Experimental  TherapeuFcs    and  Reperfusion  Injury    Harvard  Medical  School      

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COO-

OH

HO

OH

D

D D

DD

380=M-­‐H  362=M-­‐H-­‐H2O  344=M-­‐H-­‐2H2O  336=M-­‐H-­‐CO2  318=M-­‐H-­‐H2O-­‐CO2  300=M-­‐H-­‐2H2O-­‐CO2  259=277-­‐H2O  241=277-­‐2H2O  215=277-­‐CO2-­‐H2O  185=247-­‐H2O-­‐CO2  

238  

+H  247  

277  +H  

133  -­‐H  

141  -­‐H  

344  336  318  

300  

141   277  

133  113  

113  +H  

247  238  

259  241  

215  

185