lee reynolds jmu-reu-presentation-2010
DESCRIPTION
Lee Reynolds' presentation on Development of a data acquisition system for monitoring the biological stress response of rats in a thermal gradientTRANSCRIPT
Development of a data acquisition system for monitoring the biological stress response of rats in a thermal
gradient
Lee ReynoldsIntegrated Science and Technology
Mentor: Dr. Keith HollandDr. Justin Brown PhD
Research On the RatsAutonomic Nervous System to Hypoxic StressLinked to SIDS (Sudden Infant Death Syndrome)They hypothesize that the RaPa, and likely the 5HT1A receptor, mediate the thermoregulatory responses to hypoxic stress which would be confirmed by an alteration of the normal hypothermic response to hypoxic stress Examples of Hypoxic Stress:
less oxygen, more nitrogen
Actual Rat Thermoregulatory responses to hypoxic stress were measured in male Sprague-Dawley rats using radiotelemetry
Rats were instrumented with microinjection cannulas targeting the RaPa which allowed pharmacologic alterations in neurotransmission
Changes in core temperature (Tc) and selected ambient temperature (STa) during hypoxic stress were observed in rats
18 Temperature Thermocouples 18 Photoreceptors Cold Water Bath & Oxygen and Nitrogen Tank
Temperature Gradient
The TestingTime Scale:30 minutes – 1 hour for acclimation30 minute baseline test15 minutes – 36+ hour stress response tests
Selected Ambient Temperature:
The temperature at the exact position of the rat during any
given time
The OLD SystemProblems Included:
-Limited Lifetime -Keyboard Failure -Not User Friendly -Sometimes would not boot up - Raw Data would have to be processed -Time consuming data manipulationRaw data must be processedNo raw data manipulationIf a position sensor was not blocked or if multiple were blocked, the data processing program would not workRequired time consuming manual removal of these data samples
Thermocouples Problems With Old Thermocouples:
- Poor Connection - Unorganized and messy - Sometimes would take a whole day to replace just one
New Gradient System
More Efficient New “modular” data acquisition system – room for expansion and modification in the future
Space saver
Looks cooler
“Under the Hood”
LabVIEW No longer need to process
the raw data – once the test is finished, the relevant data is already summarized at appropriate time intervals
Automatically recognize if multiple photoreceptors are tripped and adjust readings accordingly (data analysis does not fail)
Automatically recognize and alert user to thermocouple and/or photoreceptor failures/errors
New SystemWithout need for post
processing, data manipulation time is eliminated, allowing for tests to be run in closer succession.
More “user friendly” identification of potential data errors.
Addition of standard deviation and summary statistics for important parameters to improve result accuracy
Can be run continuously, even when data is not being stored, to monitor conditions – no need to run and analyze additional baseline tests.
“Things are working unbelievably well so far. We have been collecting data and the lab students will start to analyze it shortly. I have looked at it and it seems to be organized perfectly. This system will be a much quicker, and more reliable, way to get our data. Plus, we can easily replace it if the computer system fails using the back up files we made” – Dr. Brown
Thank You Dr. Keith HollandDr. Robert PrinsDr. Justin Brown Dr. Chris Hughes JMU REU Program
DOD-ASSURE/NSF-REU grant # DMR-0851367